Citrus Sinensis ID: 002450

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920
Protein Sequence
MKRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSSENDSMCISYQNNKRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPACRIGSSSTDSTECVSGVEVG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccHHHHHcccccccccEEEEEEccEEEEEEcccccccccccccccHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccHHHHHHcccccccccccccccccccccccccccHHHHHHHcccccccEEEEEcccccccccEEEEEEcccEEEccccccccEEccccHHHHccccccccccccEEcccccHHHHHHHHHHcccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEcccccccccEEEEEEccEEEEccEEccccEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHcccccccccccHHHHHHcccccccccccccccEEEcccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEccEEEEEEEEEEEccEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHccccccccHHHHHHHHHccccEEEEcccEEEEEcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEccccccEccccccEHHHcccccccccccEEEEEEEEcEEEEEEccccccccccHHHHHHcccccccccccccccccccEEcccccccccccccccccccccccccccEEcccccccccccccccccccEEEEcccccccccccccHHHccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccHcHHHHHHcccccccEEEEEEccccccEEEEEEEEcccEEEccccccccEEEcHHHHHHHccccccccccEEEEcccccHHHHHHHHHcccHHHHHHHHHHHcccccccccEEEccccccccHHHccccccccccccccccccccccccccccEEcccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccEccccEEccccccccEEEcccccccccccccccccccccccccccHHHHEcccccccccEEEEEccccEEEcccEccccEEEcccccEccHHHHHHHHHcccccccccccEEccccccHHHHHHHHHcccccHHcccccccccHHHHHHHHHHHcccccccccccEEEcccccccccccccEEEEEcHccHHHcHHHHcccccccHHcccccccccccHHHHHHHHHHHHHcccccccccccHHHEEEccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHEEccccccccccEEEEEEEEEccEEEEEEEEEEEccEEEEccEEEccHHHHccHHHHHHHHHHHHHHHHcccHHEEHccHHHHHHHHHHHcccccccHHHHHHHHHccccEEEEcccEEEEccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MKRELDYELagsldetstqslpqagiqasDCVKAACENVrckrfkvtkvnGFIVYSRvkrsrfsnsddlleddvidKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENVIEETvkgkkapickeepiskvecfprkeggsevsnglnkkclkrpsamkpkvepVEVLVTQsegfgnesMSLIEVEAIAegsaltspkknleLKMSkkislnkkpmtVTELFETGLLDGVSVVYMGGIKFQASglrgiirdggilcscslcngcrvippskfeiHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALsslpeeksfacvrckgtfpitcvgktgpgplcnscvkskkpqgtmtyttgirirasgpklvsrssendsmcisYQNNKRERKKTRKLLEADlvsksssksVSLRNLlktrspweltrnssrpglianstpvtsvhkssqsqRQRKITKKSKKTVLiskpfenaspplsfpnksrwnitpkdqrlhklvfdesglpdgtevgyYACGQKLLEGYKnglgiichccnsevspsqfeahaecaslssipqgdwyCKYCQNMFERKRFLQHDanaveagrvsgvdSVEQITKRCIRIVKNLEAELSGcllcrgcdfsksgfgprtillcdqcerefhvgclkkhkmadlrelpkgkwfccmdcsrINSVLQNLLVQEAEKLPEFHLNAIKKYAgnsletvsDIDVRWRllsgkaatpETRLLLSQAVAIFhdcfdpivdsisgrdlipsmvygrnlrgqefggMYCAILTVNSSVVSAGILRVFgqevaelplvatskinhgkGYFQLLFACIEKLLSFLRVKSIvlpaaeeaesiwtdkfgfkkidpELLSIYRKRCSQLVtfkgtsmlqkrvpacrigssstdstecvsgvevg
Flexible Loop (DISEMBL)
MKRELDYELAGSldetstqslpqAGIQASDCVKAACENVrckrfkvtkvngfivysrvkrsrfsnsddlleddvidkrinskihegrinkvvKNVLNENGILESVVEEENQLVQMTVENVIeetvkgkkapickeepiskvecfprkeggsevsnglnkkclkrpsamkpkvepVEVLVTQSEGFGNESMSLIEVEAIAegsaltspkknlelkmskkislnkkpmtVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFpitcvgktgpgplcnscvkskkpqgtmtyttgirirasgpklvsrssendsmcisyqnnkrerkkTRKLleadlvsksssksvslrnllktrspweltrnssrpglianstpvtsvhkssqsqrqrkitkkskktvliskpfenaspplsfpnksrwnitpkdqRLHKLVFdesglpdgtEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVeagrvsgvdsveqITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYagnsletvsDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAeeaesiwtdkfgfkkIDPELLSIYRKRCSQLVtfkgtsmlqkrvpacrigssstdstecvsgvevg
Low Complexity Region (SEG)
MKRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASglrgiirdggilCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSSENDSMCISYQNNkrerkktrklleADlvsksssksvslRNLLKTRSPWELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPACRIGSSSTDSTECVSGVEVG
Disordered region (IsUnstruct)
*************************IQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENVIEETVKGKKAPIC********************************************************************************************MTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVK*******MTYTTGIRI*********************************************************************************************************************************RLHKLVFDESGLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPAC*******************
Disordered Region (DISOPRED)
*********************************************VTKVNGFIVY****************************************************************************************************************************************************************************VTELFETGLLDGVSVVYMGGI*********IIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLR*****************LSSLPEEKSFACVRCKGTFPITCVGKTGPGPL***********************************************************************************************************************************************************LVFDESGLPDGTEVG******KLLEGYKNGLGIICHCCNSEVSPSQFEAHAECA*****P**DWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPE*L*IYRKRCSQLVTFKGTSMLQKR***********************
Disordered Region (DISEMBL)
*************************IQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRAS***********DSMCISYQNNKRERKKTRKLLEAD***********LRNLLKTRSPWELTRNSSRPGLIANS***********************KTVLISKPFENASPPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPA********************
Disordered Region (DISPRO)
*****************TQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVK*********************************************************************KAPIC******KVE*FP*************************************************************************ISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCV*KTGPGPLCNSCV*****************************************************************************************************SQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVP*********************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSSENDSMCISYQNNKRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPACRIGSSSTDSTECVSGVEVG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	920	2.2.26 [Sep-21-2011]
Q9VWF2	2006	Supporter of activation o	yes	no	0.070	0.032	0.329	0.0002

>sp|Q9VWF2|SAYP_DROME Supporter of activation of yellow protein OS=Drosophila melanogaster GN=e(y)3 PE=2 SV=3

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 14/79 (17%)

Query: 614  ITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADL 673
            +  R +  V+N   + +GC  C  C   +S   P  +L C+QC+R +H+ CL       L
Sbjct: 1730 MPPRMVGRVRNYNWQCAGCKCCIKC---RSSQRPGKMLYCEQCDRGYHIYCLG------L 1780

Query: 674  RELPKGKWFC-----CMDC 687
            R +P G+W C     CM C
Sbjct: 1781 RTVPDGRWSCERCCFCMRC 1799

Essential transcription regulator during early development. Coactivates transcription of some euchromatin genes and repress transcription in of euchromatin genes translocated to heterochromatin.
Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	920
255556782	855	DNA binding protein, putative [Ricinus c	0.9	0.968	0.501	0.0
449524528	937	PREDICTED: uncharacterized protein LOC10	0.941	0.924	0.481	0.0
449440157	946	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.947	0.921	0.473	0.0
224140243	741	predicted protein [Populus trichocarpa]	0.738	0.916	0.527	0.0
356570792	796	PREDICTED: uncharacterized protein LOC10	0.832	0.962	0.491	0.0
224068881	697	predicted protein [Populus trichocarpa]	0.692	0.913	0.525	0.0
356533354	745	PREDICTED: uncharacterized protein LOC10	0.696	0.860	0.505	0.0
356546024	753	PREDICTED: uncharacterized protein LOC10	0.709	0.867	0.486	1e-179
297827161	1007	hypothetical protein ARALYDRAFT_482652 [	0.902	0.824	0.409	1e-179
30686882	1007	acyl-CoA N-acyltransferase with RING/FYV	0.731	0.668	0.470	1e-177

>gi|255556782|ref|XP_002519424.1| DNA binding protein, putative [Ricinus communis] gi|223541287|gb|EEF42838.1| DNA binding protein, putative [Ricinus communis]

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/931 (50%), Positives = 599/931 (64%), Gaps = 103/931 (11%)

Query: 1   MKRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKR 60
           MKRE+     G   E+ +Q       QA D    +  N  CKRFKV  VNGF VYSR+++
Sbjct: 1   MKREVGAFDGGIQFESESQ-------QAQD----SNNNNNCKRFKV--VNGFFVYSRLRK 47

Query: 61  SRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENV 120
           ++ S+ +                H+ +  K  +       I+++V E E       V++V
Sbjct: 48  NKPSSRE---------------CHDDKDRKCQQ-------IIQTVSEVETVNKDPQVKDV 85

Query: 121 IEE-TVKGKKAPICKEEPISK-VECFPRKEGGSE-------------VSNGLNKKCLKRP 165
             E ++   + PICK E  S+        EGG+E              SN L +  L R 
Sbjct: 86  SRELSLCNVQLPICKIESFSEPSRVILANEGGTEDTERKLAHVGTEGKSNKLRQ--LTR- 142

Query: 166 SAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKP 225
           S    KVEPVEV V   E   +E +S ++VE IAEGSALT PKKNLELKMSKKI+L+  P
Sbjct: 143 SNFTLKVEPVEVKVNGLETIDSEMISKVDVEMIAEGSALTPPKKNLELKMSKKIALDNIP 202

Query: 226 MTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIH 285
           MTV ELFETGLL+GV VVYMGG K  A  LRG I+D GILC CS C GCRVIPPS+FEIH
Sbjct: 203 MTVKELFETGLLEGVPVVYMGGKK--AFCLRGTIKDVGILCYCSFCKGCRVIPPSQFEIH 260

Query: 286 ACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGT 345
           A KQYRRA+QYICFENGKSLL+VL ACR+ PL  L+AT+QSA+S LP+EK+F C RCKGT
Sbjct: 261 AIKQYRRAAQYICFENGKSLLDVLNACRNSPLDSLEATIQSAISGLPKEKTFTCKRCKGT 320

Query: 346 FPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSSENDSMCISYQNN 405
           +P   VGK GP  LC+SCV+SK+  G+    T I+ R+S P  VS+S  +    +S +N 
Sbjct: 321 YPTILVGKVGP--LCSSCVESKESNGSPACETNIKSRSSKPATVSKSLNSALEGVSSEN- 377

Query: 406 KRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWELTRNSSR-PGLIANSTPVTSVHK 464
                                           +  W++T    R   L+     +    +
Sbjct: 378 --------------------------------KCQWKITTKDQRLHKLVFEDGGLPDGTE 405

Query: 465 SSQSQRQRKITKKSKKTVLISKPFENAS-PPLSFPNKSRWNITPKDQRLHKLVFDESGLP 523
            +   R +K+    K+   I     N    P +F   + W    K    +  ++  +G+ 
Sbjct: 406 VAYYARGQKLLMGYKRGFGILCCCCNCEVSPSTFEAHAGWATRKKP---YAYIYTSNGVS 462

Query: 524 DGTEVGYYACGQKLLEGYKNGLGIICHCCNSEV----SPSQFEAHAECASLSSIPQGDWY 579
                   + G+K      + L I+C    S +     P  F  H  CASLSSIP+G W+
Sbjct: 463 LHELAISLSKGRKYSARDNDDLCIVCADGGSLILCDGCPRAF--HKGCASLSSIPRGKWF 520

Query: 580 CKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCD 639
           C++CQNMF+R++F++H+ANAV AGR+SGVD +EQIT+RCIRIVKN+EAEL+GC+LCRG D
Sbjct: 521 CQFCQNMFQREKFVEHNANAVAAGRISGVDPIEQITQRCIRIVKNIEAELTGCVLCRGYD 580

Query: 640 FSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLV 699
           FS+SGFGPRTI+LCDQC +EFHVGCL+ HK+A+L+ELPKGKWFCC DC RI+S L+ LL 
Sbjct: 581 FSRSGFGPRTIILCDQCGKEFHVGCLRSHKIANLKELPKGKWFCCPDCGRIHSALKKLLA 640

Query: 700 QEAEKLPEFHLNAI-KKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCF 758
           +EAE +P   L  + KK     LETV++IDVRW+LL+GK+A+PET+LLLSQA+AIF +CF
Sbjct: 641 REAEIIPNKLLEVVMKKNEEKGLETVNNIDVRWKLLTGKSASPETKLLLSQALAIFQECF 700

Query: 759 DPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLV 818
           DPIVD+ +GRDLIP MVYG+N +GQ++GGMYCA+L VNS VVSA I+R+FGQEVAELPLV
Sbjct: 701 DPIVDT-TGRDLIPLMVYGKNSKGQDYGGMYCAVLMVNSFVVSAAIVRIFGQEVAELPLV 759

Query: 819 ATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIY 878
           ATS  NHGKGYFQLLF+ IEKLL++L+V SIVLPAAEEAESIWTDKFGF+KI P+ LS Y
Sbjct: 760 ATSNGNHGKGYFQLLFSFIEKLLAYLKVHSIVLPAAEEAESIWTDKFGFQKIKPDQLSKY 819

Query: 879 RKRCSQLVTFKGTSMLQKRVPACRIGSSSTD 909
           RK C Q++TFKGTSMLQK VP CRI + +T+
Sbjct: 820 RKSCCQILTFKGTSMLQKAVPPCRIVNQNTE 850

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449524528|ref|XP_004169274.1| PREDICTED: uncharacterized protein LOC101231774 [Cucumis sativus]

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/969 (48%), Positives = 605/969 (62%), Gaps = 103/969 (10%)

Query: 1   MKRELDY------ELAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIV 54
           MKREL +      +L G+LD T ++ L +A    S  +     +  CKRFK + VNG IV
Sbjct: 1   MKRELAFALEVQSQLEGTLDHTRSEILAEAR-PGSSYLDETARSGGCKRFKGSVVNGLIV 59

Query: 55  YSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQ 114
           Y+RV++S+ +    LL D+   K+ +S   +GR       VL      ES   EE Q+  
Sbjct: 60  YTRVRKSQINVYSGLL-DNGNRKKCDST--DGR------EVLGSFAPEESCRTEEVQI-- 108

Query: 115 MTVENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLK----------- 163
                        K + +CK+E    VE    KE G+E S+ +  K +K           
Sbjct: 109 ------------QKTSSVCKKESDEVVENSGNKEEGAEGSSLVIAKDIKVEGNLPGWEIK 156

Query: 164 --RPSAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISL 221
               S++ PKVEP+++          E +S +  E     ++L++PK  LELKMSKKI+L
Sbjct: 157 RFTRSSLGPKVEPMDITPLAIGSVKEEVISDVGGETSETVNSLSTPKNKLELKMSKKIAL 216

Query: 222 NKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSK 281
           NK+PMTV ELFETGLL+GV V+YMG  K    GLRG I+D GILC+CS CNGCRVIPPS+
Sbjct: 217 NKRPMTVRELFETGLLEGVPVIYMGVKKADDFGLRGTIKDSGILCTCSSCNGCRVIPPSQ 276

Query: 282 FEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVR 341
           FEIHAC QY+RA+QYIC ENGKSLL++L+AC+      L+AT+QS +SS PEEK F C  
Sbjct: 277 FEIHACNQYKRAAQYICLENGKSLLDLLKACKG-SRQTLEATVQSLISSSPEEKHFTCRD 335

Query: 342 CKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTY----TTGI--RIRASGPKLVSRSSEN 395
           CKG FP + VG+ GP  LC SC +SK+ +  +T     T+GI  R+R + P     S   
Sbjct: 336 CKGCFP-SSVGQVGP--LCPSCEESKRSKWMLTLPAPPTSGIGKRLRLAEPTTSKSSGSA 392

Query: 396 DSMCISYQNNKRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWELTRNSSRPGLIAN 455
                S    K   K   K  E   +S+S  +S  +R   K +S  ++ + S +P L+  
Sbjct: 393 SVSISSRYKRKWVTKAKSKSSEYTSISRSP-RSAPMRIPSKNKSALKMRKKSLKPALMLK 451

Query: 456 STPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLHKL 515
           S+   S   SS ++ Q KIT K ++  L    FE        P+ +      + Q+L + 
Sbjct: 452 SSQSASKCSSSLAKNQWKITTKDQR--LHKLVFEEDG----LPDGTEVAYFARGQKLLQG 505

Query: 516 VFDESGL----------PDGTEV--GY------YAC------------------GQKLLE 539
               SG+          P   EV  G+      YA                   G+K   
Sbjct: 506 YKKGSGILCCCCNCVVSPSQFEVHAGWSSRKKPYAYIYTSNGVSLHELAISLSKGRKYSA 565

Query: 540 GYKNGLGIIC----HCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQH 595
              + L IIC    +    +  P  F  H ECASLSS P+GDWYCK+CQNMF+R++F++H
Sbjct: 566 KDNDDLCIICLDGGNLLLCDGCPRAF--HKECASLSSTPRGDWYCKFCQNMFQREKFVEH 623

Query: 596 DANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQ 655
           + NAV AGRV GVD +EQITKRCIRIV+N+E +LSGC+LCRG DFSKSGFGPRTI+LCDQ
Sbjct: 624 NVNAVAAGRVHGVDPIEQITKRCIRIVRNIETDLSGCVLCRGSDFSKSGFGPRTIILCDQ 683

Query: 656 CEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKK 715
           CE+EFHVGCLK HKMA L+ELP+GKWFC + C+RI+S LQ LL++  EKLP   L A+ +
Sbjct: 684 CEKEFHVGCLKDHKMAFLKELPRGKWFCSIVCTRIHSALQKLLIRGPEKLPNSLLGAVNR 743

Query: 716 YAGNSLETVS-DIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSM 774
             G +   +  D+DV WRL+SGK A+PETRLLLS+A+AIFHD FDPIVD  SGRDLIP+M
Sbjct: 744 KLGENCSDIQVDVDVSWRLISGKIASPETRLLLSEAIAIFHDRFDPIVDITSGRDLIPAM 803

Query: 775 VYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLF 834
           VYGR++ GQEFGGMYCAIL VNS VVSA +LRVFGQ++AELPLVATS  NHGKGYFQ LF
Sbjct: 804 VYGRDVGGQEFGGMYCAILIVNSFVVSAAMLRVFGQDIAELPLVATSNGNHGKGYFQTLF 863

Query: 835 ACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSML 894
           +CIE+LL+FL+VK +VLPAAEEAESIWT+KFGF++I P+ LS YR+ C Q+VTFKGTSML
Sbjct: 864 SCIERLLAFLKVKCLVLPAAEEAESIWTEKFGFERIKPDQLSSYRRSCCQMVTFKGTSML 923

Query: 895 QKRVPACRI 903
           QK VP+CR+
Sbjct: 924 QKTVPSCRV 932

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440157|ref|XP_004137851.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101203549 [Cucumis sativus]

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/972 (47%), Positives = 601/972 (61%), Gaps = 100/972 (10%)

Query: 1   MKRELDY------ELAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIV 54
           MKREL +      +L G+LD T ++ L +A    S  +     +  CKRFK + VNG IV
Sbjct: 1   MKRELAFALEVQSQLEGTLDHTRSEILAEAR-PGSSYLDETARSGGCKRFKGSVVNGLIV 59

Query: 55  YSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQ 114
           Y+RV++S+ +    LL D+   K+ +S   +GR       VL      ES   EE Q+  
Sbjct: 60  YTRVRKSQINVYSGLL-DNGNRKKCDST--DGR------EVLGSFAPEESCRTEEVQI-- 108

Query: 115 MTVENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLK----------- 163
                        K + +CK+E    VE    KE G+E S+ +  K +K           
Sbjct: 109 ------------QKTSSVCKKESDEVVENSGNKEEGAEGSSLVIAKDIKVEGNLPGWEIK 156

Query: 164 --RPSAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISL 221
               S++ PKVEP+++          E +S +  E     ++L++PK  LELKMSKKI+L
Sbjct: 157 RFTRSSLGPKVEPMDITPLAIGSVKEEVISDVGGETSETVNSLSTPKNKLELKMSKKIAL 216

Query: 222 NKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSK 281
           NK+PMTV ELFETGLL+GV V+YMG  K    GLRG I+D GILC+CS CNGCRVIPPS+
Sbjct: 217 NKRPMTVRELFETGLLEGVPVIYMGVKKADDFGLRGTIKDSGILCTCSSCNGCRVIPPSQ 276

Query: 282 FEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVR 341
           FEIHAC QY+RA+QYIC ENGKSLL++L+AC+      L+AT+QS +SS PEEK F C  
Sbjct: 277 FEIHACNQYKRAAQYICLENGKSLLDLLKACKG-SRQTLEATVQSLISSSPEEKHFTCRD 335

Query: 342 CKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTY----TTGI--RIRASGPKLVSRSSEN 395
           CKG FP + VG+ GP  LC SC +SK+ +  +T     T+GI  R+R + P     S   
Sbjct: 336 CKGCFP-SSVGQVGP--LCPSCEESKRSKWMLTLPAPPTSGIGKRLRLAEPTTSKSSGSA 392

Query: 396 DSMCISYQNNKRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWELTRNSSRPGLIAN 455
                S    K   K   K  E   +S+S  +S  +R   K +S  ++ + S +P L+  
Sbjct: 393 SVSISSRYKRKWVTKAKSKSSEYTSISRSP-RSAPMRIPSKNKSALKMRKKSLKPALMLK 451

Query: 456 STPVTSVHKSSQSQRQRKITKKSK---KTVLISKPFENASPPLSFPNKSRW--------- 503
           S+   S   SS ++ Q KIT K +   K V       + +    F    +          
Sbjct: 452 SSQSASKCSSSLAKNQWKITTKDQRLHKLVFEEDGLPDGTEVAYFARGQKLLQGYKKGSG 511

Query: 504 --------NITPKDQRLHK----------LVFDESGLPDGTEVGYYACGQKLLEGYKNGL 545
                    ++P    +H            ++  +G+         + G+K      + L
Sbjct: 512 ILCCCCNCVVSPSQFEVHAGWSSRKKPYAYIYTSNGVSLHELAISLSKGRKYSAKDNDDL 571

Query: 546 GIIC----HCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVE 601
            IIC    +    +  P  F  H ECASLSSIP+GDWYCK+CQNMF+R++F++H+ NAV 
Sbjct: 572 CIICLDGGNLLLCDGCPRAF--HKECASLSSIPRGDWYCKFCQNMFQREKFVEHNVNAVA 629

Query: 602 AGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFH 661
           AGRV GVD +EQITKRCIRIV+N+E +LSGC+LCRG DFSKSGFGPRTI+LCDQCE+EFH
Sbjct: 630 AGRVHGVDPIEQITKRCIRIVRNIETDLSGCVLCRGSDFSKSGFGPRTIILCDQCEKEFH 689

Query: 662 VGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSL 721
           VGCLK HKMA L+ELP+GKWFC + C+RI+S LQ LL++  EKLP   L A+ +  G + 
Sbjct: 690 VGCLKDHKMAFLKELPRGKWFCSIVCTRIHSALQKLLIRGPEKLPNSLLGAVNRKLGENC 749

Query: 722 ETVS-DIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNL 780
             +  D+DV WRL+SGK A+PETRLLLS+A+AIFHD FDPIVD  SGRDLIP+MVYGR++
Sbjct: 750 SDIQVDVDVSWRLISGKIASPETRLLLSEAIAIFHDRFDPIVDITSGRDLIPAMVYGRDV 809

Query: 781 RGQEFGGMYCAILTVNSSVVSAGILRVFGQ---------EVAELPLVATSKINHGKGYFQ 831
            GQEFGGMYCAIL VNS VVSA +LRVFGQ         ++AELPLVATS  NHGKGYFQ
Sbjct: 810 GGQEFGGMYCAILIVNSFVVSAAMLRVFGQYCRAAIGCXDIAELPLVATSNGNHGKGYFQ 869

Query: 832 LLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGT 891
            LF+CIE+LL+FL+VK +VLPAAEEAESIWT+KFGF++I P+ LS YR+ C Q+VTFKGT
Sbjct: 870 TLFSCIERLLAFLKVKCLVLPAAEEAESIWTEKFGFERIKPDQLSSYRRSCCQMVTFKGT 929

Query: 892 SMLQKRVPACRI 903
           SMLQK VP+CR+
Sbjct: 930 SMLQKTVPSCRV 941

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140243|ref|XP_002323493.1| predicted protein [Populus trichocarpa] gi|222868123|gb|EEF05254.1| predicted protein [Populus trichocarpa]

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/751 (52%), Positives = 502/751 (66%), Gaps = 72/751 (9%)

Query: 215 MSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGC 274
           MSKKI+L+  P+TV ELFETGLL+GV VVYMGG KFQA GLRG I+D GILCSC+ CNG 
Sbjct: 1   MSKKIALDNVPLTVKELFETGLLEGVPVVYMGGKKFQAFGLRGTIKDVGILCSCAFCNGR 60

Query: 275 RVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEE 334
           RVIPPS+FEIHA KQYRRA+QYICFENGKSLL+VL ACR+ PL  L+ T+QSA+S LP E
Sbjct: 61  RVIPPSQFEIHAIKQYRRAAQYICFENGKSLLDVLNACRTAPLDSLETTIQSAISGLPVE 120

Query: 335 KSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGI--RIRASGPKLV--- 389
           ++F C RCKG FP  CVGK GP  LCN C +SK+   T+T  + I  R   + P L+   
Sbjct: 121 RTFTCKRCKGIFPSICVGKIGP--LCNLCAESKESHPTLTIGSSIISRYCQNLPSLILIS 178

Query: 390 ------SRSSENDSMCISYQNNKRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWEL 443
                 + +S    + +++ + +       ++L  +    +S  + S  N L+ +     
Sbjct: 179 WIINLKTITSGQFLLMLAHCSFRLSFLSPEQVLALEYFKPASLSTFSQDNTLRKKK---- 234

Query: 444 TRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRW 503
            R    P LIA  + V SVH S + ++ +KI+ + ++  L    FE        P+ +  
Sbjct: 235 -RKPEEPDLIAKPSKVASVHLSPRKRKYKKISPRDQR--LHRLVFEEGG----LPDGTEL 287

Query: 504 NITPKDQRL---HKLVFD----------------ESGLPDGTEVGYYAC----------- 533
               + Q+L   +K  F                 E+     T    YAC           
Sbjct: 288 AYYARGQKLLGGYKRGFGILCHCCNCEVVSPSTFEAHAGWATRKKPYACIYTSNGVSLHD 347

Query: 534 -------GQKLLEGYKNGLGIICH------CCNSEVSPSQFEAHAECASLSSIPQGDWYC 580
                   +K      + L IIC        C+    P  F  H  CASLS++P GDWYC
Sbjct: 348 LAISLSKSRKYSSQDNDDLCIICADGGDLLLCDG--CPRAF--HKGCASLSTVPSGDWYC 403

Query: 581 KYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDF 640
           ++CQN F+R++F++H+ANA  AGRVS +DS+EQITKRC RIVKN+EAEL+GC LCRG DF
Sbjct: 404 QHCQNTFQREKFVEHNANAFAAGRVSEIDSIEQITKRCFRIVKNVEAELTGCALCRGYDF 463

Query: 641 SKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQ 700
            +SGFGPRTI+LCDQCE+EFHVGCL+ HKMA+L+ELPKG WFCCMDCSRI+S LQ LL++
Sbjct: 464 MRSGFGPRTIILCDQCEKEFHVGCLRSHKMANLKELPKGNWFCCMDCSRIHSTLQKLLIR 523

Query: 701 EAEKLPEFHLNAIKK-YAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFD 759
            AEKLP+  LN IKK +    L   + IDVRW LLSGK A+PE +LLLS+A++IF +CFD
Sbjct: 524 GAEKLPDSLLNDIKKKHEEKGLNISNSIDVRWTLLSGKIASPENKLLLSRALSIFQECFD 583

Query: 760 PIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVA 819
           PIVDS  GRDLIP MVYG+N +GQ++GGMYCA+L VNS +VSAGILRVFG+EVAELPLVA
Sbjct: 584 PIVDSTIGRDLIPLMVYGKNSKGQDYGGMYCAVLIVNSCIVSAGILRVFGEEVAELPLVA 643

Query: 820 TSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYR 879
           T   +HGKGYFQLLF+CIEKLL+FL V+++VLPAAEEAESIW +KFGF+KI PE LS YR
Sbjct: 644 TRNGDHGKGYFQLLFSCIEKLLAFLNVQNLVLPAAEEAESIWIEKFGFQKIKPEQLSKYR 703

Query: 880 KRCSQLVTFKGTSMLQKRVPACRIGSSSTDS 910
           K C Q+V F+GTSMLQK VP C+I + S +S
Sbjct: 704 KNCCQMVRFEGTSMLQKAVPTCKIVNQSIES 734

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570792|ref|XP_003553568.1| PREDICTED: uncharacterized protein LOC100802562 [Glycine max]

 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/864 (49%), Positives = 544/864 (62%), Gaps = 98/864 (11%)

Query: 45  KVTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILES 104
           KV+ VNG+IVY+R KRS  S                                  NG  E 
Sbjct: 21  KVSVVNGYIVYTRAKRSLDSC---------------------------------NGFSEH 47

Query: 105 VVEEENQLVQMTVENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKR 164
              ++N  V++  EN                      EC   K   +EV     K+   R
Sbjct: 48  AELKDNAEVEVKTENG---------------------ECEKLKNESTEVVARTRKR--SR 84

Query: 165 PSAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKK 224
            SA++ KVE  + +V       +E+  ++         AL +P+  +ELKMSKKI +N+K
Sbjct: 85  RSALEAKVECCDQMVV------SETEQVVANGGSGINGALGAPRNKMELKMSKKIVVNRK 138

Query: 225 PMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEI 284
           PMTV +LF+TG LDGVSVVYMGGIK +ASGLRG+IRDGGILCSC LCNG RVIPPS+FEI
Sbjct: 139 PMTVKKLFDTGFLDGVSVVYMGGIK-KASGLRGVIRDGGILCSCCLCNGRRVIPPSQFEI 197

Query: 285 HACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKG 344
           HACKQYRRA+QYIC ENGKSLL++LRACR   L  L+ T+Q+ + S  EE+ F C RCKG
Sbjct: 198 HACKQYRRAAQYICLENGKSLLDLLRACRGATLHTLEVTVQNFVCSPHEERYFTCKRCKG 257

Query: 345 TFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSSENDSMCISYQN 404
            FP + V + GP  +C SCV+S+K + +     G R+R+  P ++S  S    + +S Q 
Sbjct: 258 CFPSSFVERVGP--ICRSCVESRKSEESSNNVVGKRVRSPRPVVLSNPSSTSELSVSSQV 315

Query: 405 NKRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWELTRNSSRPGLIANSTPVTSVHK 464
            KR RKK  KL+    +S SS     L  L+   +             + + T V    +
Sbjct: 316 -KRHRKKRTKLV---FISISSVLDQRLHKLVFEENG------------LPDGTEVAYYAR 359

Query: 465 SSQSQRQRK----ITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLHKLVFDES 520
             +     K    I  +   T +    FE  +   S      +  T     LH+L     
Sbjct: 360 GQKLLEGFKMGSGIVCRCCNTEISPSQFEVHAGWASRKKPYAYIYTSNGVSLHELAIS-- 417

Query: 521 GLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYC 580
            L    +          +  +  G  ++C  C     P  F  H ECA+LSSIP+GDWYC
Sbjct: 418 -LSKDRKYSAKDNDDLCIVCWDGGNLLLCDGC-----PRAF--HKECAALSSIPRGDWYC 469

Query: 581 KYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDF 640
           ++CQNMF+R++F+ H+ANAV AGRV GVD +EQI  RCIRIVK++EA+LS C LCRG DF
Sbjct: 470 QFCQNMFQREKFVAHNANAVAAGRVEGVDPIEQIANRCIRIVKDIEADLSSCALCRGVDF 529

Query: 641 SKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQ 700
           S+SGFGPRTI+LCDQCE+E+HVGCL+ HKMA L+ELP+G W CC DC+RI+S L+NLLV+
Sbjct: 530 SRSGFGPRTIILCDQCEKEYHVGCLRDHKMAYLKELPEGNWLCCNDCTRIHSTLENLLVK 589

Query: 701 EAEKLPEFHLNAIKK-YAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFD 759
            AE+LPE  L  IKK      LE +  IDVRWRLL+GK A+PETR LL +AV+IFH+CF+
Sbjct: 590 GAERLPESLLGVIKKKQEEKGLEPI--IDVRWRLLNGKIASPETRPLLLEAVSIFHECFN 647

Query: 760 PIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVA 819
           PIVD+ SGRDLIP+MVYGRN+RGQEFGGMYCA+L VNSSVVSAG+LR+FG +VAELPLVA
Sbjct: 648 PIVDAASGRDLIPAMVYGRNVRGQEFGGMYCALLIVNSSVVSAGMLRIFGSDVAELPLVA 707

Query: 820 TSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYR 879
           TS  NHGKGYFQ LF+CIE+LL+FL VK++VLPAAEEAESIWTDKFGF K++P+ L+ YR
Sbjct: 708 TSNGNHGKGYFQTLFSCIERLLAFLNVKNLVLPAAEEAESIWTDKFGFSKMNPDELTNYR 767

Query: 880 KRCSQLVTFKGTSMLQKRVPACRI 903
           K C Q+V+FKGT+ML K VP+CR+
Sbjct: 768 KNCHQMVSFKGTNMLHKMVPSCRV 791

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068881|ref|XP_002326222.1| predicted protein [Populus trichocarpa] gi|222833415|gb|EEE71892.1| predicted protein [Populus trichocarpa]

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/752 (52%), Positives = 485/752 (64%), Gaps = 115/752 (15%)

Query: 215 MSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGC 274
           MSKKI+L   PMTV ELFETGLL+GV VVYMGG KFQA GLRG I+D GILCSC+ CNG 
Sbjct: 1   MSKKIALENVPMTVKELFETGLLEGVPVVYMGGKKFQAFGLRGTIKDAGILCSCAFCNGH 60

Query: 275 RVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEE 334
           RVIPPS+FEIHA KQYRRA+QYICFENGKSLL+VL ACR+ PL  L+ T+QSA+S LP E
Sbjct: 61  RVIPPSQFEIHAIKQYRRAAQYICFENGKSLLDVLNACRTAPLDSLETTIQSAISGLPVE 120

Query: 335 KSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSSE 394
           ++F C RCK                                   + +    P  +S SS+
Sbjct: 121 RTFTCKRCKEQV--------------------------------LALEYFKPASLSTSSQ 148

Query: 395 NDSMCISYQNNKRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWELTRNSSRPGLIA 454
           +++           RKK RK  E D ++K S KS S+    + R   +++     P L+ 
Sbjct: 149 DNT----------PRKKKRKPEEQDSITKPS-KSASVYLSSRKRKYKKIS-----PRLVC 192

Query: 455 NSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLHK 514
              P+  +                K  V I K +   SP   F          +DQRLH+
Sbjct: 193 FFYPIDILFGLVMLS-PFPFLWLVKIFVFIRK-YAYLSPFCPFSGYQS-----QDQRLHR 245

Query: 515 LVFDESGLPDGTEVGYYACGQ-------------------------KLLEGY-----KNG 544
           LVF+E GLPDGTE+ YYA GQ                         KLL GY      NG
Sbjct: 246 LVFEEGGLPDGTELAYYARGQVINITYSYPFTFLLLIVNKINSSSQKLLGGYAYIYTSNG 305

Query: 545 LGI--------------------ICHCCNS-------EVSPSQFEAHAECASLSSIPQGD 577
           + +                    +C  C         +  P  F  H  CAS+ ++P GD
Sbjct: 306 VSLHELAISLSKSRKYSSRDNDDLCIICADGGNLLLCDGCPRAF--HKGCASIPTVPSGD 363

Query: 578 WYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRG 637
           WYC+YCQN FER++ ++H+ANA  AGR SG+DS+EQITKRC RIVKN+EAEL+GC LCRG
Sbjct: 364 WYCQYCQNTFEREKLVEHNANASAAGRDSGIDSIEQITKRCFRIVKNIEAELTGCALCRG 423

Query: 638 CDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNL 697
            DF +SGFGPRTI+LCDQCE+EFHVGCL+ HKM +L+ELPKG WFCCMDCSRI+S LQ L
Sbjct: 424 YDFMRSGFGPRTIILCDQCEKEFHVGCLRSHKMTNLKELPKGNWFCCMDCSRIHSTLQKL 483

Query: 698 LVQEAEKLPEFHLNAIKK-YAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHD 756
           L++ AEKLP+  LN IKK +    L   ++IDVRW LLSGK A+PE +LLLS+A++IF +
Sbjct: 484 LIRGAEKLPDSLLNDIKKKHEERGLNISNNIDVRWTLLSGKIASPENKLLLSRALSIFQE 543

Query: 757 CFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELP 816
           CFDPIVDS  GRDLIP MVYG+N +GQ++GGMYCA+LT+NSS+VSAGILRVFG+EVAELP
Sbjct: 544 CFDPIVDSTIGRDLIPLMVYGKNSKGQDYGGMYCAVLTINSSIVSAGILRVFGEEVAELP 603

Query: 817 LVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLS 876
           LVAT    HGKGYFQLLF+CIEKLL+FL V+++VLPAAEEAESIWT+KFGF+KI PE L+
Sbjct: 604 LVATRNGEHGKGYFQLLFSCIEKLLAFLNVQNLVLPAAEEAESIWTEKFGFQKIKPEQLN 663

Query: 877 IYRKRCSQLVTFKGTSMLQKRVPACRIGSSST 908
            YRK C Q+V F+GTSMLQK VP CRI +  T
Sbjct: 664 KYRKSCCQMVRFEGTSMLQKAVPTCRIVNQRT 695

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533354|ref|XP_003535230.1| PREDICTED: uncharacterized protein LOC100798276 [Glycine max]

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/700 (50%), Positives = 470/700 (67%), Gaps = 59/700 (8%)

Query: 217 KKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRV 276
           K I ++KKP TV ELF+TGLLDGV VVY+G  K   + LRG I+DGGILCSCSLCNG RV
Sbjct: 87  KIIVVHKKPATVKELFQTGLLDGVPVVYVGCKKDSTTELRGEIKDGGILCSCSLCNGRRV 146

Query: 277 IPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKS 336
           IPPS+FEIHAC  Y+RA+QYIC ENGKS+LE++RACR+ PL  L+AT+Q+ ++S PEEK 
Sbjct: 147 IPPSQFEIHACNIYKRAAQYICLENGKSMLELMRACRAAPLHTLEATIQNFINSPPEEKY 206

Query: 337 FACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSSEND 396
           F C  C+G FP + V + G   LC SCV+S+K + +  +  G RIR+S   +  +++   
Sbjct: 207 FTCKNCRGCFPSSNVERVGL--LCLSCVESRKSEKSSIHAVGKRIRSSKLSVKLKTAPIT 264

Query: 397 SMCISYQNNKRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWELTRNSSR-PGLIAN 455
           S C+S QN                                 +S W +++   R   LI  
Sbjct: 265 SKCLSPQN---------------------------------KSQWRISKRYQRLHKLIFE 291

Query: 456 STPVTSVHKSSQSQRQRKITKKSKK-TVLISKPFENASPPLSFPNKSRWN---------I 505
              + +  + +   R +K+ +  K  + ++ +       P  F   + W           
Sbjct: 292 EDGLPNGAEVAYYARGQKLLEGIKTCSGIVCRCCNTEISPSQFEVHAGWASRRKPYAFIY 351

Query: 506 TPKDQRLHKL-VFDESGLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAH 564
           T     LH+L +F        T+   Y C    +  +  G  ++C  C     P  F  H
Sbjct: 352 TSNGVSLHELAIFLSKDHKCTTKQNDYVC----VVCWDGGNLLLCDGC-----PRAF--H 400

Query: 565 AECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKN 624
            ECAS+SSIP+G+WYC+ CQ+ F R+R + H+A+AV AGRV GVD +EQI KRCIRIVK+
Sbjct: 401 KECASVSSIPRGEWYCQICQHTFLRERPVLHNADAVAAGRVEGVDPIEQIAKRCIRIVKD 460

Query: 625 LEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCC 684
           + AE+ GC+LCR  DFS+SGFGPRTI++CDQCE+E+HVGCL+ HKMA L+ELP+G WFCC
Sbjct: 461 IGAEMGGCVLCRSSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGDWFCC 520

Query: 685 MDCSRINSVLQNLLVQEAEKLPEFHLNAIKK-YAGNSLETVSDIDVRWRLLSGKAATPET 743
            DC+RI+S L+NLL++ AE+LPE  L+ IKK   G  LE +++IDVRW+LL+GK A+PET
Sbjct: 521 NDCTRIHSTLENLLIRVAERLPESLLDVIKKKQVGRCLEPLNEIDVRWKLLNGKIASPET 580

Query: 744 RLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAG 803
           R LL +AV++FH+CFDPIVD  +GRDLIP+MVYGRNL+ Q+FGGMYCA+L VNSSVVSAG
Sbjct: 581 RPLLLEAVSMFHECFDPIVDPAAGRDLIPAMVYGRNLQTQDFGGMYCALLIVNSSVVSAG 640

Query: 804 ILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTD 863
           ++R+FG+++AELPLVAT   N GKGYFQ LFACIE+LL+FL VK++VLPAAEEA SIWT+
Sbjct: 641 MVRIFGRDIAELPLVATRYKNRGKGYFQTLFACIERLLAFLNVKNLVLPAAEEAASIWTE 700

Query: 864 KFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPACRI 903
           KFGF K+ P  L+ YR  C Q++ FKGT+ML K VP CR+
Sbjct: 701 KFGFSKMKPNQLTNYRMNCHQIMAFKGTNMLHKTVPQCRV 740

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546024|ref|XP_003541432.1| PREDICTED: uncharacterized protein LOC100816654 [Glycine max]

 Score =  637 bits (1642), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 347/713 (48%), Positives = 465/713 (65%), Gaps = 60/713 (8%)

Query: 208 KKNLELKMSKKI-SLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILC 266
           K    LK +KKI  ++KKP+TV ELF+TGLLDGV VVY+G  K   + LRG I+DGGILC
Sbjct: 85  KTATSLKTTKKIIVVHKKPVTVKELFQTGLLDGVPVVYVGCKKDSTTELRGEIKDGGILC 144

Query: 267 SCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQS 326
           SC LCNG RVIPPS+FEIHAC  Y+RA+QYIC ENGKSLL+++RACR+ PL  L+AT+Q+
Sbjct: 145 SCRLCNGRRVIPPSQFEIHACNIYKRAAQYICLENGKSLLDLMRACRAAPLHTLEATIQN 204

Query: 327 ALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASGP 386
            ++S PEEK F C  C+G           P     S +        +   + +++R SG 
Sbjct: 205 FINSPPEEKYFTCKSCRG-----------PLGQYYSPIHVHVVLLNLNSVSLLKLRNSGR 253

Query: 387 KLVSRSSENDSMCISYQNNKRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWELTRN 446
           +  S SS                K + KL    + SK  S         + +S W +++ 
Sbjct: 254 QEQSWSS----------------KLSVKLKTVPITSKCLSP--------QNKSQWRISKR 289

Query: 447 SSR-PGLIANSTPVTSVHKSSQSQRQRKITKKSK-KTVLISKPFENASPPLSFPNKSRWN 504
             R   LI     + +  + +   R +K+ +  K +  ++ +       P  F   + W 
Sbjct: 290 YQRLHKLIFEEDGLPNGAEVAYYARGQKLLEGIKTRCGIVCRCCNTEVSPSQFEVHAGWA 349

Query: 505 ---------ITPKDQRLHKL-VFDESGLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNS 554
                     T     LH+L +F        T+   Y C    +  +  G  ++C  C  
Sbjct: 350 SRRKPYAYIYTSNGVSLHELAIFLSKDHKCTTKQNDYVC----VVCWDGGNLLLCDGC-- 403

Query: 555 EVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQI 614
              P  F  H ECAS+SSIP+G+WYC+ CQ+ F R+R + ++A+AV AGRV GVD +EQI
Sbjct: 404 ---PRAF--HKECASVSSIPRGEWYCQICQHTFLRERPVLYNADAVAAGRVEGVDPIEQI 458

Query: 615 TKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLR 674
            KRCIRIVK++ AE+ GC+LCR  DFS+SGFGPRTI++CDQCE+E+HVGCL+ HK A L+
Sbjct: 459 AKRCIRIVKDIGAEMGGCVLCRSSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKKAYLK 518

Query: 675 ELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKK-YAGNSLETVSDIDVRWRL 733
           ELP+G WFCC DC+ I+S L+NLL++ AE+LPE  L+ IKK      LE +++IDVRW+L
Sbjct: 519 ELPEGDWFCCNDCTIIHSTLENLLIRVAERLPEALLDVIKKKQVERCLEPLNEIDVRWKL 578

Query: 734 LSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAIL 793
           L+GK A+PETR LL +AV++FH+CFDPIVD  +GRDLIP+MVYGRNL+ Q+FGGMYCA+L
Sbjct: 579 LNGKIASPETRPLLLEAVSMFHECFDPIVDPAAGRDLIPAMVYGRNLQTQDFGGMYCALL 638

Query: 794 TVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPA 853
            VNSSVVSAG++R+FG+++AELPLVAT   N GKGYFQ LFACIE+LL+FL VK++VLPA
Sbjct: 639 IVNSSVVSAGMVRIFGRDIAELPLVATRYKNRGKGYFQTLFACIERLLAFLNVKNLVLPA 698

Query: 854 AEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPACRIGSS 906
           AEEAESIWT+KFGF K+  + L+ YR  C Q++ FKGT+ML K VP CR+ +S
Sbjct: 699 AEEAESIWTEKFGFSKMKLDQLTNYRMNCHQIMAFKGTNMLHKTVPRCRVTNS 751

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827161|ref|XP_002881463.1| hypothetical protein ARALYDRAFT_482652 [Arabidopsis lyrata subsp. lyrata] gi|297327302|gb|EFH57722.1| hypothetical protein ARALYDRAFT_482652 [Arabidopsis lyrata subsp. lyrata]

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 397/970 (40%), Positives = 549/970 (56%), Gaps = 140/970 (14%)

Query: 41  CKRFKVTKVNGFIVYSRVKRSRFSNSDD-------LLEDDVIDKRINSK----IHEGRI- 88
           CKR K T+VNGFIVY+R ++++F+   +       LLE+ + +    SK    +  G I 
Sbjct: 42  CKRIKTTQVNGFIVYTRTRKTKFTKLHEQGDENAGLLENRMSNHLEESKPTIGVTNGSIG 101

Query: 89  ------NKVVKNVLNENGILESVVEEE----------------NQLVQMTVENVIEETVK 126
                 N  +KN   E+   +  VEE                 + LV + ++++    + 
Sbjct: 102 ETNVSGNSCIKNTFVESPAGKIAVEERLVTGSLAESPAVETDSSSLVDVVIDDINFVELL 161

Query: 127 GKKAPICKEEPISKVEC-FPRKEGGSEV-----SNGLNKKCLKRPSAMKPKVE------- 173
            ++ P+   E +S+    F  K  G++V     S  +++K  KR  + K   +       
Sbjct: 162 HEEIPV---EILSEGSLDFEVKRLGTKVRTMGKSYSVSEK--KRHGSFKRTAQIYKSILR 216

Query: 174 --------PVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKP 225
                   P  V V     FG E               L     ++ L   K I + ++P
Sbjct: 217 MKKVNNLVPENVEVLSEPDFGRE--------------GLDEQSHSVSLA-DKSILIRRRP 261

Query: 226 MTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIH 285
            TV ELFETG+LDG+SVVYMG +K QA GLRGII+DGGILCSCS C+   VI  SKFEIH
Sbjct: 262 ETVRELFETGILDGLSVVYMGTVKSQAFGLRGIIKDGGILCSCSSCDWAHVISTSKFEIH 321

Query: 286 ACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGT 345
           ACKQYRRASQYICFENGKSLL+VL   R+ PL  L+AT+  A+    +EK F C RCKG 
Sbjct: 322 ACKQYRRASQYICFENGKSLLDVLNISRNTPLHALEATILDAVDYASKEKCFTCKRCKGA 381

Query: 346 FPITCVGKTGPGPLCNSCVKSKKPQGT---MTYTTGIRIRASGP-----KLVSRSSENDS 397
           FP + +G  G   LC SC + +  Q +   M  +T      + P     K+  + SE+ S
Sbjct: 382 FPFSSLGHRGF--LCMSCSEVETSQASPAAMWTSTSSPACIASPVKSRLKITRKPSESMS 439

Query: 398 MCISYQN--NKRERKKTRKLLEADLVSK---SSSKSVSLRNLLKTRSPWELTRNSSRPGL 452
           +   + +      R  TRK L   LV K   S+S ++S +N  +++    LT+ S  P  
Sbjct: 440 ISPVFMSPLGNSTRNITRKALRQALVGKAYLSASTNISSQNKCRSKFKKMLTQYSVTP-- 497

Query: 453 IANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPP----LSFPNKS------- 501
                  +     S  +R  ++T+K +   L    FE    P    L +  +        
Sbjct: 498 ---KAVKSVSLSVSSKKRSYRLTRKDQG--LHKLVFERGGLPEGTELGYYARGQKLLGGY 552

Query: 502 -----------RWNITPKDQRLHK----------LVFDESGLPDGTEVGYYACGQKLLEG 540
                      +  ++P     H            ++  +G+        ++ G+K    
Sbjct: 553 KMGAGIYCYCCKSEVSPSLFEAHAGWASRRKPYFYIYTSNGVSLHEWATTFSQGRKYSAN 612

Query: 541 YKNGLGIICH------CCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQ 594
             N L +IC        C+S   P  F  H EC SL SIP+G+W+CKYC+N F  +   +
Sbjct: 613 DNNDLCVICADGGNLLLCDS--CPRAF--HIECVSLPSIPRGNWHCKYCENKFTSEIAGE 668

Query: 595 HDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCD 654
           ++ N+   G++ GVD V+Q   RCIR+VKN+EAE +GC+LC G DF +SGFGPRTI++CD
Sbjct: 669 YNVNSSAVGQLEGVDPVDQSAGRCIRVVKNMEAETNGCVLCSGSDFCRSGFGPRTIIICD 728

Query: 655 QCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAI- 713
           QCE+E+H+GCL    + DL+ELPKG WFC MDC+RINS LQ LL+  AE L +  L  I 
Sbjct: 729 QCEKEYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINSTLQKLLLGGAETLSDSSLGIIQ 788

Query: 714 KKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPS 773
           +K     + ++SD+D+RWRL+SGK  +PE+R+LLSQA+AIFHDCFDPIVD +SGR+LIP 
Sbjct: 789 RKQERTDVYSISDLDIRWRLISGKVTSPESRMLLSQALAIFHDCFDPIVDPLSGRNLIPR 848

Query: 774 MVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLL 833
           MVYG+ ++GQ++GG+ CA+LTVN++VVSAG+LRVFG+EVAELPLVAT   +  KGYFQLL
Sbjct: 849 MVYGKTMQGQDYGGICCAVLTVNATVVSAGLLRVFGREVAELPLVATRMCSREKGYFQLL 908

Query: 834 FACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSM 893
           F+CIEKLLS L V+SIV+PAAEEAE +W +KFGF+K+ PE LS Y K C Q+V FKG SM
Sbjct: 909 FSCIEKLLSSLNVESIVVPAAEEAEPLWMNKFGFRKLAPEQLSKYIKICYQMVRFKGASM 968

Query: 894 LQKRVPACRI 903
           LQK V A +I
Sbjct: 969 LQKPVHAHQI 978

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686882|ref|NP_850270.1| acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Arabidopsis thaliana] gi|20260434|gb|AAM13115.1| putative PHD-type zinc finger protein [Arabidopsis thaliana] gi|31711790|gb|AAP68251.1| At2g36720 [Arabidopsis thaliana] gi|330254196|gb|AEC09290.1| acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Arabidopsis thaliana]

 Score =  630 bits (1624), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 348/740 (47%), Positives = 462/740 (62%), Gaps = 67/740 (9%)

Query: 217 KKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRV 276
           K I +  +P TV +LFETGLLDG+SVVYMG +K QA  LRGIIRDGGILCSCS C+   V
Sbjct: 253 KSILIRSRPETVRDLFETGLLDGLSVVYMGTVKSQAFPLRGIIRDGGILCSCSSCDWANV 312

Query: 277 IPPSKFEIHACKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKS 336
           I  SKFEIHACKQYRRASQYICFENGKSLL+VL   R+ PL  L+AT+  A+    +EK 
Sbjct: 313 ISTSKFEIHACKQYRRASQYICFENGKSLLDVLNISRNTPLHALEATILDAVDYASKEKR 372

Query: 337 FACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASGP---------- 386
           F C RCKG FP + +G  G   LC SC + +  Q ++  T   R   S P          
Sbjct: 373 FTCKRCKGPFPFSSLGHRGF--LCKSCSEVETSQASLAAT---RTSTSAPACITSPVKSR 427

Query: 387 -KLVSRSSENDSMCISYQNN--KRERKKTRKLLEADLVSK---SSSKSVSLRNLLKTRSP 440
            K+  + SE+ S+   + ++     RK TRK L   LV K   S+S +VS +   +++  
Sbjct: 428 LKITRKPSESTSISPVFMSSLGNSTRKITRKALRQALVGKAYLSASTNVSSQKKCRSKFK 487

Query: 441 WELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENAS-------- 492
             LT++S  P   A  +   SV    +S R  +  +   K V         +        
Sbjct: 488 KMLTQHSVTPK--ALKSVSLSVSSKKRSYRLARKDQGLHKLVFDRGGLPEGTELGYYARG 545

Query: 493 ----------------------PPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEVGY 530
                                  P  F   + W      ++ +  ++  +G+        
Sbjct: 546 QKLLGGYKMGAGIYCYCCKCEVSPSLFEAHAGW---ASRRKPYFYIYTSNGVSLHEWATT 602

Query: 531 YACGQKLLEGYKNGLGIICH------CCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQ 584
           ++ G+K      N L +IC        C+S   P  F  H EC SL SIP+G+W+CKYC+
Sbjct: 603 FSHGRKYSANDNNDLCVICADGGNLLLCDS--CPRAF--HIECVSLPSIPRGNWHCKYCE 658

Query: 585 NMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSG 644
           N F  +   +++ N+   G++ GVD V+Q+  RCIR+VKN+EAE +GC+LC G DF +SG
Sbjct: 659 NKFTSEIAGEYNVNSSAVGQLEGVDPVDQLAGRCIRVVKNMEAETNGCVLCSGSDFCRSG 718

Query: 645 FGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEK 704
           FGPRTI++CDQCE+E+H+GCL    + DL+ELPKG WFC MDC+RINS LQ LL+  AEK
Sbjct: 719 FGPRTIIICDQCEKEYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINSTLQKLLLGGAEK 778

Query: 705 LPEFHLNAIK-KYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVD 763
           L +  L  I+ K   N + ++SD+D+RWRL+SGK  +PE+R+LLSQA+AIFHDCFDPIVD
Sbjct: 779 LSDSSLGIIQTKQERNDVYSISDLDIRWRLISGKVTSPESRMLLSQALAIFHDCFDPIVD 838

Query: 764 SISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKI 823
            +SG +LIP MVYG+ ++GQ++GG+ CA+LTVN++VVSAG+LRVFG+EVAELPLVAT   
Sbjct: 839 PLSGSNLIPRMVYGKTMQGQDYGGICCAVLTVNATVVSAGLLRVFGREVAELPLVATRMC 898

Query: 824 NHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCS 883
           +  KGYFQLLF+CIEKLLS L V+SIV+PAAEEAE +W +KFGF+K+ PE LS Y K C 
Sbjct: 899 SREKGYFQLLFSCIEKLLSSLNVESIVVPAAEEAEPLWMNKFGFRKLAPEQLSKYIKICY 958

Query: 884 QLVTFKGTSMLQKRVPACRI 903
           Q+V FKG SMLQK V + +I
Sbjct: 959 QMVRFKGASMLQKPVDSHQI 978

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	920
TAIR|locus:2040550	1007	AT2G36720 "AT2G36720" [Arabido	0.401	0.366	0.573	2.9e-187
TAIR|locus:2201021	1138	AT1G05380 "AT1G05380" [Arabido	0.268	0.217	0.311	2.4e-24
TAIR|locus:2163961	557	AT5G63900 "AT5G63900" [Arabido	0.213	0.351	0.291	3.8e-23
TAIR|locus:2147391	1179	AT5G36740 [Arabidopsis thalian	0.233	0.182	0.296	1e-22
TAIR|locus:2178828	1065	AT5G58610 "AT5G58610" [Arabido	0.143	0.123	0.320	1.3e-21
TAIR|locus:2086395	1189	ROS4 "AT3G14980" [Arabidopsis	0.364	0.281	0.272	4.7e-19
TAIR|locus:2832118	1193	AT5G36670 [Arabidopsis thalian	0.233	0.180	0.263	1e-15
TAIR|locus:2168088	425	AT5G59830 "AT5G59830" [Arabido	0.182	0.395	0.271	1.7e-11
TAIR|locus:2173179	537	AT5G13660 "AT5G13660" [Arabido	0.142	0.243	0.311	2.2e-06
MGI|MGI:109529	391	Dpf2 "D4, zinc and double PHD	0.234	0.552	0.223	0.00033

TAIR|locus:2040550 AT2G36720 "AT2G36720" [Arabidopsis thaliana (taxid:3702)]

 Score = 1157 (412.3 bits), Expect = 2.9e-187, Sum P(3) = 2.9e-187
 Identities = 218/380 (57%), Positives = 286/380 (75%)

Query:   531 YACGQKLLEGYKNGLGIICH------CCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQ 584
             ++ G+K      N L +IC        C+S   P  F  H EC SL SIP+G+W+CKYC+
Sbjct:   603 FSHGRKYSANDNNDLCVICADGGNLLLCDS--CPRAF--HIECVSLPSIPRGNWHCKYCE 658

Query:   585 NMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSG 644
             N F  +   +++ N+   G++ GVD V+Q+  RCIR+VKN+EAE +GC+LC G DF +SG
Sbjct:   659 NKFTSEIAGEYNVNSSAVGQLEGVDPVDQLAGRCIRVVKNMEAETNGCVLCSGSDFCRSG 718

Query:   645 FGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEK 704
             FGPRTI++CDQCE+E+H+GCL    + DL+ELPKG WFC MDC+RINS LQ LL+  AEK
Sbjct:   719 FGPRTIIICDQCEKEYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINSTLQKLLLGGAEK 778

Query:   705 LPEFHLNAIK-KYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVD 763
             L +  L  I+ K   N + ++SD+D+RWRL+SGK  +PE+R+LLSQA+AIFHDCFDPIVD
Sbjct:   779 LSDSSLGIIQTKQERNDVYSISDLDIRWRLISGKVTSPESRMLLSQALAIFHDCFDPIVD 838

Query:   764 SISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKI 823
              +SG +LIP MVYG+ ++GQ++GG+ CA+LTVN++VVSAG+LRVFG+EVAELPLVAT   
Sbjct:   839 PLSGSNLIPRMVYGKTMQGQDYGGICCAVLTVNATVVSAGLLRVFGREVAELPLVATRMC 898

Query:   824 NHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCS 883
             +  KGYFQLLF+CIEKLLS L V+SIV+PAAEEAE +W +KFGF+K+ PE LS Y K C 
Sbjct:   899 SREKGYFQLLFSCIEKLLSSLNVESIVVPAAEEAEPLWMNKFGFRKLAPEQLSKYIKICY 958

Query:   884 QLVTFKGTSMLQKRVPACRI 903
             Q+V FKG SMLQK V + +I
Sbjct:   959 QMVRFKGASMLQKPVDSHQI 978

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009630 "gravitropism" evidence=RCA

TAIR|locus:2201021 AT1G05380 "AT1G05380" [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 2.4e-24, Sum P(3) = 2.4e-24
 Identities = 84/270 (31%), Positives = 126/270 (46%)

Query:   635 CRGCDFSKSGFGPR----TILLCDQCEREFHVGCL--KKHKMADLRELPKGKWFCCMDCS 688
             C+ CD + +  G      ++L C  CER +H  CL  + HK+   +       FC   C 
Sbjct:   669 CKFCDAAVASGGKDGNFISLLSCGMCERRYHQLCLNDEAHKV---QSFGSASSFCGPKCL 725

Query:   689 RINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLS 748
              +   LQ  L  + E    +  + I +     ++T SD + +       A   E    L+
Sbjct:   726 ELFEKLQKYLGVKTEIEGGYSWSLIHR-----VDTDSDTNSQM-----SAQRIENNSKLA 775

Query:   749 QAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSSVVSAGILR 806
               +AI  +CF PIVD  SG DLI +++Y  G N     + G Y AIL     ++SA  LR
Sbjct:   776 VGLAIMDECFLPIVDRRSGVDLIRNVLYNCGSNFNRINYTGFYTAILERGDEIISAASLR 835

Query:   807 VFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFG 866
               G ++AE+P + T  I   +G  + LF  IE  +  L+V+ +V+PA  +    WT  FG
Sbjct:   836 FHGMQLAEMPFIGTRHIYRRQGMCRRLFDAIESAMRSLKVEKLVIPAIPDFLHAWTGNFG 895

Query:   867 FKKIDPELLSIYRKRCSQLVTFKGTSMLQK 896
             F  +D  +    R   + LV F G  MLQK
Sbjct:   896 FTPLDDSVRKEMRS-LNTLV-FPGIDMLQK 923

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IC;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2163961 AT5G63900 "AT5G63900" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
 Identities = 60/206 (29%), Positives = 104/206 (50%)

Query:   711 NAIKKYAGNSLETVSDIDVRWRLL----SGKAATPETRLLLSQAVAIFHDCFDPIVDSIS 766
             +A++   G+ +   +D D+ W L+     G+    E    L  AV I H  F+P  D  S
Sbjct:   353 SALENLLGSKIAVGNDGDLVWTLMRAPNEGEHYDDEQISKLESAVEILHQGFEPTNDVFS 412

Query:   767 GRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHG 826
             GRDL+  ++Y ++  G    G Y  ++   +  ++   +RV  ++V E+PLVAT      
Sbjct:   413 GRDLVEELIYRKDRTGVG-RGFYTVLIERKNEPITVAAVRV-DKDVVEIPLVATLSSYRR 470

Query:   827 KGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP-ELLSIYRKRCSQL 885
              G  ++L   +EK +S + V  +VLPAA+E  + WT++FGF  ++  E L + +     +
Sbjct:   471 SGMCRVLMDELEKQMSQMGVCRLVLPAAKEVVTTWTERFGFSVMNSSERLELVKHG---M 527

Query:   886 VTFKGTSMLQKRVPACRIGSSSTDST 911
             + F GT M  K +   R  + S + +
Sbjct:   528 LDFVGTIMCHKFLQKERAENDSAEES 553

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0008080 "N-acetyltransferase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2147391 AT5G36740 [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
 Identities = 69/233 (29%), Positives = 110/233 (47%)

Query:   682 FCCMDCSRINSVLQNLLVQEAEKLPE-FHLNAIKKYAGNSLETVSDIDVRWRLLSGKAAT 740
             FC   C  +   LQ L +     LPE F  + ++++   S   V+D D+     S K A 
Sbjct:   753 FCGKYCQELFEELQ-LFIGVKHPLPEGFSWSFLRRFELPS--EVADCDI-----SEKIAY 804

Query:   741 PETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSS 798
                   ++ A ++  +CF P+VD  SG +L+ ++VY  G N    +F     A+L     
Sbjct:   805 ---NAKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDE 861

Query:   799 VVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAE 858
             +++   +R+ G ++AE+P + T  +   +G  + L   IE  L  L+V  +V+PA  E  
Sbjct:   862 IIAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIESALGSLKVDKLVIPAVPELI 921

Query:   859 SIWTDKFGFKKI-DPELLSIYRKRCSQLVTFKGTSMLQKRVPACRIGSSSTDS 910
               WT  FGF  + D E  +I  K  + LV F G  ML K +   +I  S   S
Sbjct:   922 DTWTSGFGFAPVNDSEKKTI--KNLNLLV-FPGVDMLGKSLVKEKITDSVVSS 971

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2178828 AT5G58610 "AT5G58610" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
 Identities = 43/134 (32%), Positives = 73/134 (54%)

Query:   739 ATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGR--NLRGQEFGGMYCAILTVN 796
             A  E   +LS A+ + H+ F+P+     GRDL   +++ R    +   F G Y  +L  N
Sbjct:   814 AAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERN 873

Query:   797 SSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE 856
             + +VS   +R+ G++VAE+P + T   +  +G  ++L   +EK+L  L V+ +VLPA   
Sbjct:   874 NELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPC 933

Query:   857 AESIWTDKFGFKKI 870
               + W + FGF K+
Sbjct:   934 VLNTWINSFGFTKM 947

GO:0003677 "DNA binding" evidence=ISS

GO:0003723 "RNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010200 "response to chitin" evidence=IEP

GO:0042991 "transcription factor import into nucleus" evidence=RCA

TAIR|locus:2086395 ROS4 "AT3G14980" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
 Identities = 104/381 (27%), Positives = 172/381 (45%)

Query:   546 GIICHCCNSEVSPSQFEAHA------ECASL---SSIPQGD-----WYCKYC--QNMFER 589
             G++C CCN  VS S+F+ HA       C +L   S  P        W  +Y   +N +  
Sbjct:   657 GVVCTCCNKTVSLSEFKNHAGFNQNCPCLNLFMGSGKPFASCQLEAWSAEYKARRNGWRL 716

Query:   590 KRFLQHDANAVEAGRVSGVDSVEQIT---------KRCIRIVKNLEAE--LSGCLLCRGC 638
             ++    D N    G V G D  E I          + C+ +    E     S C  C  C
Sbjct:   717 EKASDDDPNDDSCG-VCG-DGGELICCDNCPSTFHQACLSMQVLPEGSWYCSSCT-CWIC 773

Query:   639 DFSKSGFGPRTI-LLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNL 697
                 S    R+    C QC  ++H  CL+   ++  R+L    +FC  +C ++ + L + 
Sbjct:   774 SELVSDNAERSQDFKCSQCAHKYHGTCLQG--ISKRRKLFPETYFCGKNCEKVYNGLSSR 831

Query:   698 LVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDC 757
             +            + +K +  + +   +      R L+ KA   E    L+ A++I  + 
Sbjct:   832 VGIINPNADGLSWSILKCFQEDGMVHSA------RRLALKA---ECNSKLAVALSIMEES 882

Query:   758 FDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAEL 815
             F  +VD  +G D+IP ++Y  G      +F G Y  ++  +  ++S   +RV G  +AE+
Sbjct:   883 FLSMVDPRTGIDMIPHVLYNWGSTFARLDFDGFYTVVVEKDDVMISVASIRVHGVTIAEM 942

Query:   816 PLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELL 875
             PLVAT      +G  ++L A IE++L  L+V+ +V+ A       WT+ FGFK +D E  
Sbjct:   943 PLVATCSKYRRQGMCRILVAAIEEMLMSLKVEKLVVAALPSLVETWTEGFGFKPMDDEER 1002

Query:   876 SIYRKRCSQLVTFKGTSMLQK 896
                 KR + L+ F GT++L+K
Sbjct:  1003 DAL-KRIN-LMVFPGTTLLKK 1021

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0009506 "plasmodesma" evidence=IDA

GO:0007267 "cell-cell signaling" evidence=RCA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

GO:0004402 "histone acetyltransferase activity" evidence=IDA

GO:0010385 "double-stranded methylated DNA binding" evidence=IPI

GO:0042393 "histone binding" evidence=IDA

GO:0043971 "histone H3-K18 acetylation" evidence=IDA

GO:0043972 "histone H3-K23 acetylation" evidence=IDA

GO:0044030 "regulation of DNA methylation" evidence=IMP

GO:0044154 "histone H3-K14 acetylation" evidence=IDA

GO:0080188 "RNA-directed DNA methylation" evidence=IMP

TAIR|locus:2832118 AT5G36670 [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
 Identities = 65/247 (26%), Positives = 110/247 (44%)

Query:   682 FCCMDCSRINSVLQNLLVQEAEKLPE-FHLNAIKKYAGNSLETVSDIDVRWRLLSGKAAT 740
             FC   C  +   LQ L +     LPE F  + ++++   S   V+D D+     S K A 
Sbjct:   753 FCGKYCQELFEELQ-LFIGVKHPLPEGFSWSFLRRFELPS--EVADCDI-----SEKIAY 804

Query:   741 PETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSS 798
                   ++ A ++  +CF P+VD  SG +L+ ++VY  G N    +F     A+L     
Sbjct:   805 ---NAKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDE 861

Query:   799 VVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLS-----FLRVKSIVL-- 851
             +++   +R+ G ++AE+P + T  +   +G  + L   IE  ++     FL +  ++L  
Sbjct:   862 IIAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIESFVAYFSQMFLAISEVLLDV 921

Query:   852 ------PAA-EEAESIWTDKFGFKKI-DPELLSIYRKRCSQLVTFKGTSMLQKRVPACRI 903
                   PA   +    +   FGF  + D E  +I  K  + LV F G  ML K +   +I
Sbjct:   922 WQFCCYPACFGDGPFCFFSGFGFAPVNDSEKKTI--KNLNLLV-FPGVDMLGKSLVKEKI 978

Query:   904 GSSSTDS 910
               S   S
Sbjct:   979 TDSVVSS 985

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2168088 AT5G59830 "AT5G59830" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 47/173 (27%), Positives = 81/173 (46%)

Query:   166 SAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKP 225
             S ++  +  ++++  Q  G    S  ++  + +A+ S  + PK   E K SKK +    P
Sbjct:   232 SYVQDPIGTLDIVYDQETGSSQTSSGVVSEQQVAKPSLGSLPKTKAEAKSSKKEASTSFP 291

Query:   226 MTVTELFETGLLDGVSVVYMGGIKFQASXXXXXXXXXXXXCSCSLCNGCRVIPPSKFEIH 285
               V  L  TG+LDGV V Y   +                 C C  C+  +V+    FE H
Sbjct:   292 SNVRSLISTGMLDGVPVKY---VSVSREELRGVIKGSGYLCGCQTCDFTKVLNAYAFERH 348

Query:   286 A-CKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSF 337
             A CK  +  + +I FENGK++ ++++  R+ P  +L   +Q+   S   +K+F
Sbjct:   349 AGCKT-KHPNNHIYFENGKTIYQIVQELRNTPESILFDVIQTVFGSPINQKAF 400

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2173179 AT5G13660 "AT5G13660" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 42/135 (31%), Positives = 63/135 (46%)

Query:   204 LTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASXXXXXXXXXX 263
             L  PK   + K +KK S N  P  V  L  TG+ DGV+V Y    + Q +          
Sbjct:   379 LLVPKIK-DTKTAKKGSTNTFPSNVKSLLSTGIFDGVTVKYYSWSREQRNLKGMIKGTGY 437

Query:   264 XXCSCSLCNGCRVIPPSKFEIHA-CKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKA 322
               C C  C   +V+   +FE HA CK  +  + +I FENGK++  V++  ++ P   L  
Sbjct:   438 L-CGCGNCKLNKVLNAYEFEQHANCKT-KHPNNHIYFENGKTIYGVVQELKNTPQEKLFD 495

Query:   323 TLQSALSSLPEEKSF 337
              +Q+   S    K+F
Sbjct:   496 AIQNVTGSDINHKNF 510

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

MGI|MGI:109529 Dpf2 "D4, zinc and double PHD fingers family 2" [Mus musculus (taxid:10090)]

 Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
 Identities = 57/255 (22%), Positives = 102/255 (40%)

Query:   465 SSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWN-ITPKDQRLHKLVFDESGLP 523
             S+   R+R I        L  + +E  +P      KS+   ++   ++L   + ++   P
Sbjct:   149 SNSRARKRIIEPDDFLDDLDDEDYEEDTPKRRGKGKSKSKGVSSARKKLDASILEDRDKP 208

Query:   524 DGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVS------------PSQFEAHAECASLS 571
                ++    CG++    YKN  G+  H  +S ++            P+     +E     
Sbjct:   209 YACDI----CGKR----YKNRPGLSYHYAHSHLAEEEGEDKEDSRPPTPVSQRSEEQKSK 260

Query:   572 SIPQG----DWYCKYC--QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKN 624
               P G    + YC +C   +   +K     +  +  + GR SG  S  Q T   +  VK 
Sbjct:   261 KGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKT 319

Query:   625 LEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC- 683
                +   C+ C+ C+   +      +L CD C+R +H+ CL       + E P+G W C 
Sbjct:   320 YRWQ---CIECKCCNLCGTSENDDQLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCH 372

Query:   684 -CMDCSRIN-SVLQN 696
              C+D  +   S+ QN
Sbjct:   373 LCLDLLKEKASIYQN 387

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	920
pfam00628	51	pfam00628, PHD, PHD-finger	2e-04
smart00249	47	smart00249, PHD, PHD zinc finger	2e-04

>gnl|CDD|201356 pfam00628, PHD, PHD-finger

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 10/58 (17%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDC 687
           C +C   D          +LLCD C+R FH+ CL      +  E+P+G+W+C  C   
Sbjct: 2   CAVCGKVD------DDGELLLCDGCDRWFHLACLGPPL--EPEEIPEGEWYCPECKPK 51

PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner to that of the RING and FYVE domains. Several PHD fingers have been identified as binding modules of methylated histone H3. Length = 51

>gnl|CDD|214584 smart00249, PHD, PHD zinc finger

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 9/52 (17%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 683
           C +C   D          +L CD C+R +H  CL       L E P GKW+C
Sbjct: 2   CSVCGKPD------DGGELLQCDGCDRWYHQTCL---GPPLLEEEPDGKWYC 44

The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in epigenetics and chromatin-mediated transcriptional regulation. The PHD finger binds two zinc ions using the so-called 'cross-brace' motif and is thus structurally related to the RING finger and the FYVE finger. It is not yet known if PHD fingers have a common molecular function. Several reports suggest that it can function as a protein-protein interacton domain and it was recently demonstrated that the PHD finger of p300 can cooperate with the adjacent BROMO domain in nucleosome binding in vitro. Other reports suggesting that the PHD finger is a ubiquitin ligase have been refuted as these domains were RING fingers misidentified as PHD fingers. Length = 47

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	920
COG1246	153	ArgA N-acetylglutamate synthase and related acetyl	99.35
KOG0956	900	consensus PHD finger protein AF10 [General functio	99.06
PRK07757	152	acetyltransferase; Provisional	98.95
PF13508	79	Acetyltransf_7: Acetyltransferase (GNAT) domain; P	98.91
PF00583	83	Acetyltransf_1: Acetyltransferase (GNAT) family; I	98.9
PF13673	117	Acetyltransf_10: Acetyltransferase (GNAT) domain;	98.83
PRK10314	153	putative acyltransferase; Provisional	98.73
PTZ00330	147	acetyltransferase; Provisional	98.63
PLN02825	515	amino-acid N-acetyltransferase	98.6
PLN02706	150	glucosamine 6-phosphate N-acetyltransferase	98.59
PRK10146	144	aminoalkylphosphonic acid N-acetyltransferase; Pro	98.59
PF13527	127	Acetyltransf_9: Acetyltransferase (GNAT) domain; P	98.58
PRK07922	169	N-acetylglutamate synthase; Validated	98.55
PRK03624	140	putative acetyltransferase; Provisional	98.53
cd02169	297	Citrate_lyase_ligase Citrate lyase ligase. Citrate	98.5
TIGR01890	429	N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi	98.5
TIGR01575	131	rimI ribosomal-protein-alanine acetyltransferase.	98.49
KOG1244	336	consensus Predicted transcription factor Requiem/N	98.48
TIGR02382	191	wecD_rffC TDP-D-fucosamine acetyltransferase. This	98.42
TIGR03827	266	GNAT_ablB putative beta-lysine N-acetyltransferase	98.38
KOG0825	1134	consensus PHD Zn-finger protein [General function	98.38
TIGR00124	332	cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP	98.35
PRK05279	441	N-acetylglutamate synthase; Validated	98.35
PRK10975	194	TDP-fucosamine acetyltransferase; Provisional	98.35
PRK12308	614	bifunctional argininosuccinate lyase/N-acetylgluta	98.34
PRK09491	146	rimI ribosomal-protein-alanine N-acetyltransferase	98.31
PHA00673	154	acetyltransferase domain containing protein	98.22
COG5141	669	PHD zinc finger-containing protein [General functi	98.2
KOG1512	381	consensus PHD Zn-finger protein [General function	98.19
PRK10140	162	putative acetyltransferase YhhY; Provisional	98.14
PRK09831	147	putative acyltransferase; Provisional	98.11
TIGR03448	292	mycothiol_MshD mycothiol biosynthesis acetyltransf	98.09
TIGR03448	292	mycothiol_MshD mycothiol biosynthesis acetyltransf	98.06
PRK13688	156	hypothetical protein; Provisional	98.04
cd04301	65	NAT_SF N-Acyltransferase superfamily: Various enzy	97.93
TIGR02406	157	ectoine_EctA L-2,4-diaminobutyric acid acetyltrans	97.92
COG0456	177	RimI Acetyltransferases [General function predicti	97.9
KOG3139	165	consensus N-acetyltransferase [General function pr	97.9
PF13420	155	Acetyltransf_4: Acetyltransferase (GNAT) domain; P	97.88
KOG0955	1051	consensus PHD finger protein BR140/LIN-49 [General	97.86
TIGR03103	547	trio_acet_GNAT GNAT-family acetyltransferase TIGR0	97.83
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	97.78
PRK01346	411	hypothetical protein; Provisional	97.78
PF00628	51	PHD: PHD-finger; InterPro: IPR019787 Zinc finger (	97.77
KOG3396	150	consensus Glucosamine-phosphate N-acetyltransferas	97.73
KOG0383	696	consensus Predicted helicase [General function pre	97.73
PRK10514	145	putative acetyltransferase; Provisional	97.71
PRK10562	145	putative acetyltransferase; Provisional	97.69
smart00249	47	PHD PHD zinc finger. The plant homeodomain (PHD) f	97.67
PHA01807	153	hypothetical protein	97.66
PF08445	86	FR47: FR47-like protein; InterPro: IPR013653 Prote	97.65
PRK15130	186	spermidine N1-acetyltransferase; Provisional	97.62
PF13523	152	Acetyltransf_8: Acetyltransferase (GNAT) domain; P	97.6
KOG4299	613	consensus PHD Zn-finger protein [General function	97.54
COG3393	268	Predicted acetyltransferase [General function pred	97.51
TIGR03585	156	PseH pseudaminic acid biosynthesis N-acetyl transf	97.48
COG2153	155	ElaA Predicted acyltransferase [General function p	97.46
KOG4443	694	consensus Putative transcription factor HALR/MLL3,	97.44
PF13302	142	Acetyltransf_3: Acetyltransferase (GNAT) domain; P	97.44
KOG0954	893	consensus PHD finger protein [General function pre	97.41
TIGR01211	522	ELP3 histone acetyltransferase, ELP3 family. The S	97.4
PF13718	196	GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2Z	97.37
PRK10809	194	ribosomal-protein-S5-alanine N-acetyltransferase;	97.3
COG3153	171	Predicted acetyltransferase [General function pred	97.24
PRK10151	179	ribosomal-protein-L7/L12-serine acetyltransferase;	97.18
COG1247	169	Sortase and related acyltransferases [Cell envelop	97.11
KOG4299	613	consensus PHD Zn-finger protein [General function	97.04
PF12568	128	DUF3749: Acetyltransferase (GNAT) domain; InterPro	96.74
cd04718	148	BAH_plant_2 BAH, or Bromo Adjacent Homology domain	96.69
KOG0955	1051	consensus PHD finger protein BR140/LIN-49 [General	96.43
PF08444	89	Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acylt	96.36
KOG1245	1404	consensus Chromatin remodeling complex WSTF-ISWI,	96.33
KOG3216	163	consensus Diamine acetyltransferase [Amino acid tr	96.28
COG5034	271	TNG2 Chromatin remodeling protein, contains PhD zi	96.22
KOG1973	274	consensus Chromatin remodeling protein, contains P	96.13
COG3053	352	CitC Citrate lyase synthetase [Energy production a	96.05
KOG1973	274	consensus Chromatin remodeling protein, contains P	96.0
PF12746	265	GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S	95.97
PF13831	36	PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A.	95.89
KOG3397	225	consensus Acetyltransferases [General function pre	95.88
COG1670	187	RimL Acetyltransferases, including N-acetylases of	95.82
KOG0957	707	consensus PHD finger protein [General function pre	95.8
COG0454	156	WecD Histone acetyltransferase HPA2 and related ac	95.72
KOG0956	900	consensus PHD finger protein AF10 [General functio	95.64
cd04718	148	BAH_plant_2 BAH, or Bromo Adjacent Homology domain	95.58
KOG4323	464	consensus Polycomb-like PHD Zn-finger protein [Gen	95.4
KOG2488	202	consensus Acetyltransferase (GNAT) domain-containi	95.4
COG5141	669	PHD zinc finger-containing protein [General functi	95.35
COG2388	99	Predicted acetyltransferase [General function pred	95.04
COG5034	271	TNG2 Chromatin remodeling protein, contains PhD zi	95.03
COG1444	758	Predicted P-loop ATPase fused to an acetyltransfer	95.02
PF15446	175	zf-PHD-like: PHD/FYVE-zinc-finger like domain	95.02
PF14542	78	Acetyltransf_CG: GCN5-related N-acetyl-transferase	94.99
KOG4144	190	consensus Arylalkylamine N-acetyltransferase [Gene	94.58
PF00628	51	PHD: PHD-finger; InterPro: IPR019787 Zinc finger (	94.57
KOG0957	707	consensus PHD finger protein [General function pre	94.0
smart00258	73	SAND SAND domain.	93.49
KOG0954	893	consensus PHD finger protein [General function pre	93.41
PF13480	142	Acetyltransf_6: Acetyltransferase (GNAT) domain	92.66
KOG3138	187	consensus Predicted N-acetyltransferase [General f	92.6
smart00249	47	PHD PHD zinc finger. The plant homeodomain (PHD) f	92.38
KOG0825	1134	consensus PHD Zn-finger protein [General function	92.26
PF13831	36	PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A.	91.35
PF01342	82	SAND: SAND domain; InterPro: IPR000770 The SAND do	89.98
KOG0383	696	consensus Predicted helicase [General function pre	89.74
KOG1473	1414	consensus Nucleosome remodeling factor, subunit NU	89.73
PF06852	181	DUF1248: Protein of unknown function (DUF1248); In	89.66
COG4552	389	Eis Predicted acetyltransferase involved in intrac	88.9
PF07897	284	DUF1675: Protein of unknown function (DUF1675); In	88.58
COG1243	515	ELP3 Histone acetyltransferase [Transcription / Ch	87.92
KOG3234	173	consensus Acetyltransferase, (GNAT) family [Genera	87.82
KOG1244	336	consensus Predicted transcription factor Requiem/N	86.82
KOG3235	193	consensus Subunit of the major N alpha-acetyltrans	86.65
KOG1512	381	consensus PHD Zn-finger protein [General function	86.58
KOG4443	694	consensus Putative transcription factor HALR/MLL3,	85.5
COG3981	174	Predicted acetyltransferase [General function pred	84.9

>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]

Probab=99.35  E-value=7.1e-13  Score=131.72  Aligned_cols=104  Identities=15%  Similarity=0.165  Sum_probs=92.1

Q ss_pred             eeCceEEEEEeeCCeEEEEEEEE-EeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHH
Q 002450          784 EFGGMYCAILTVNSSVVSAGILR-VFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWT  862 (920)
Q Consensus       784 ~f~GfY~~VLe~~~~vVsaAslr-I~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt  862 (920)
                      ++..|+.+  +.+|.|||||+++ +.+.+++||+.+||+|+||++|+|..|+..++..++.+|++++|+.+.  ..+-|+
T Consensus        38 ~i~dF~i~--E~~g~viGC~aL~~~~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt--~~~~~F  113 (153)
T COG1246          38 EIDDFTII--ERDGKVIGCAALHPVLEEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT--RSPEFF  113 (153)
T ss_pred             HHhhheee--eeCCcEEEEEeecccCccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec--ccHHHH
Confidence            44556655  8899999999999 889999999999999999999999999999999999999999999986  667788


Q ss_pred             hccCcEEcChHHHH-HHHHhCcceeeecCc
Q 002450          863 DKFGFKKIDPELLS-IYRKRCSQLVTFKGT  891 (920)
Q Consensus       863 ~kFGF~~i~~~el~-~~~~~~~~~~~F~Gt  891 (920)
                      .++||+.++.++++ .+|..++.+..|+.+
T Consensus       114 ~~~GF~~vd~~~LP~~~~~~~~~~~~~~~~  143 (153)
T COG1246         114 AERGFTRVDKDELPEEVWSSYNFCERRSKC  143 (153)
T ss_pred             HHcCCeECccccCCHHHHHHHHhhhhhhhH
Confidence            88999999999988 788777666666655

>KOG0956 consensus PHD finger protein AF10 [General function prediction only]

Probab=99.06  E-value=6.5e-11  Score=137.09  Aligned_cols=146  Identities=21%  Similarity=0.455  Sum_probs=101.8

Q ss_pred             ecceecCCCcccCCCCCccCcchhcccccccccCCCCCCCccCccch---------hhhhh--ccccccchh-hhhc---
Q 002450          538 LEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQ---------NMFER--KRFLQHDAN-AVEA---  602 (920)
Q Consensus       538 L~G~ktgdGI~CdCCn~evcPS~FEaHa~CL~LesIPsGdW~Cp~C~---------~~f~~--ek~~~~n~N-a~aa---  602 (920)
                      -.||-...+||||.=|..|     .+|++|+++..+|.|.|||+.|.         |.+|+  ++.+.+..| .||+   
T Consensus        14 ErGWaeNPLVYCDG~nCsV-----AVHQaCYGIvqVPtGpWfCrKCesqeraarvrCeLCP~kdGALKkTDn~GWAHVVC   88 (900)
T KOG0956|consen   14 ERGWAENPLVYCDGHNCSV-----AVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKDGALKKTDNGGWAHVVC   88 (900)
T ss_pred             cCCCccCceeeecCCCcee-----eeehhcceeEecCCCchhhhhhhhhhhhccceeecccCcccceecccCCCceEEEE
Confidence            3699999999999644332     34999999999999999999994         44443  456665555 4775   


Q ss_pred             ------cccCCCChhhHHhhhhhhhhccc--cccccccccccCCCCCCCCCCCCceeecC--CCCCccccccCccCcCCc
Q 002450          603 ------GRVSGVDSVEQITKRCIRIVKNL--EAELSGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCLKKHKMAD  672 (920)
Q Consensus       603 ------g~i~gvD~~e~i~~RC~R~vk~~--e~e~~~C~vC~~~df~~sgf~~~~LLlCD--QCer~YHv~CL~p~~~~~  672 (920)
                            .++..+..+|+|.      ++..  +.-...||||.+.... +....+..|.|+  .|.++|||.|.+..++..
T Consensus        89 ALYIPEVrFgNV~TMEPIi------Lq~VP~dRfnKtCYIC~E~Grp-nkA~~GACMtCNKs~CkqaFHVTCAQ~~GLLC  161 (900)
T KOG0956|consen   89 ALYIPEVRFGNVHTMEPII------LQDVPHDRFNKTCYICNEEGRP-NKAAKGACMTCNKSGCKQAFHVTCAQRAGLLC  161 (900)
T ss_pred             Eeeccceeeccccccccee------eccCchhhhcceeeeecccCCc-cccccccceecccccchhhhhhhHhhhhccce
Confidence                  4566777777763      2322  2334689999875332 123456778887  788999999998876543


Q ss_pred             cCCCC--CcceeecCcchhHHHHHHH
Q 002450          673 LRELP--KGKWFCCMDCSRINSVLQN  696 (920)
Q Consensus       673 L~evP--~g~WFC~~~C~~I~~~Lqk  696 (920)
                      -++..  +---|| -.|+.-|.+|.+
T Consensus       162 EE~gn~~dNVKYC-GYCk~HfsKlkk  186 (900)
T KOG0956|consen  162 EEEGNISDNVKYC-GYCKYHFSKLKK  186 (900)
T ss_pred             eccccccccceec-hhHHHHHHHhhc
Confidence            33322  223588 599999998866

>PRK07757 acetyltransferase; Provisional

Probab=98.95  E-value=2.8e-09  Score=102.46  Aligned_cols=97  Identities=20%  Similarity=0.295  Sum_probs=86.4

Q ss_pred             EeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEcCh
Q 002450          793 LTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP  872 (920)
Q Consensus       793 Le~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~  872 (920)
                      +..+|++||.+.+.+.+.+.+++-.++|.|+|||+|+|+.|+..+++.+...|+.++++-..  +..+|.+ +||+.+..
T Consensus        46 ~~~~~~lvG~~~l~~~~~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~--~~~~Y~k-~GF~~~~~  122 (152)
T PRK07757         46 AEEEGEIVGCCALHILWEDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY--QPEFFEK-LGFREVDK  122 (152)
T ss_pred             EEECCEEEEEEEEEeccCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHH-CCCEEccc
Confidence            35789999999999988889999999999999999999999999999999999999876543  4678875 99999999


Q ss_pred             HHHH-HHHHhCcceeeecCcc
Q 002450          873 ELLS-IYRKRCSQLVTFKGTS  892 (920)
Q Consensus       873 ~el~-~~~~~~~~~~~F~Gts  892 (920)
                      .+++ ++|+.|.-|+.|+.|+
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~  143 (152)
T PRK07757        123 EALPQKVWADCIKCPKFPNCD  143 (152)
T ss_pred             ccCChhHHhcCccCCCCCCcc
Confidence            7766 8999999999999984

>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A

Probab=98.91  E-value=1.1e-08  Score=88.95  Aligned_cols=76  Identities=18%  Similarity=0.156  Sum_probs=65.6

Q ss_pred             EEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcE
Q 002450          789 YCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFK  868 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~  868 (920)
                      +.++++.++++||++.+.-.+ +.+.|..+||.|+|||||+|+.||..+++.+..   ..+++-+.+.+.++|.+ +||+
T Consensus         4 ~~~~~~~~~~ivG~~~~~~~~-~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~~~~~~~fY~~-~GF~   78 (79)
T PF13508_consen    4 RFFVAEDDGEIVGFIRLWPNE-DFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFTNPAAIKFYEK-LGFE   78 (79)
T ss_dssp             EEEEEEETTEEEEEEEEEETT-TEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEEEHHHHHHHHH-TTEE
T ss_pred             EEEEEEECCEEEEEEEEEEcC-CEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEEcHHHHHHHHH-CcCC
Confidence            556678999999999996665 599999999999999999999999999888854   56678888899999996 9998


Q ss_pred             E
Q 002450          869 K  869 (920)
Q Consensus       869 ~  869 (920)
                      +
T Consensus        79 ~   79 (79)
T PF13508_consen   79 E   79 (79)
T ss_dssp             E
T ss_pred             C
Confidence            5

...

>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2

Probab=98.90  E-value=8.1e-09  Score=88.77  Aligned_cols=74  Identities=20%  Similarity=0.250  Sum_probs=67.2

Q ss_pred             eeCCeEEEEEEEEEeCC-----eeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhh---hHHHHHhcc
Q 002450          794 TVNSSVVSAGILRVFGQ-----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---AESIWTDKF  865 (920)
Q Consensus       794 e~~~~vVsaAslrI~G~-----~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e---a~~~Wt~kF  865 (920)
                      +.+|+|||++.+++...     ..+.|-.++|.++|||||+|+.|++.+++.++..|+..|++...++   +..+|.+ +
T Consensus         2 ~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k-~   80 (83)
T PF00583_consen    2 EEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEK-L   80 (83)
T ss_dssp             EETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHH-T
T ss_pred             cCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHH-c
Confidence            67899999999999865     5999999999999999999999999999999999999999887665   4588985 9


Q ss_pred             CcE
Q 002450          866 GFK  868 (920)
Q Consensus       866 GF~  868 (920)
                      ||+
T Consensus        81 Gf~   83 (83)
T PF00583_consen   81 GFE   83 (83)
T ss_dssp             TEE
T ss_pred             CCC
Confidence            996

3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....

>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A

Probab=98.83  E-value=2.1e-08  Score=91.39  Aligned_cols=74  Identities=18%  Similarity=0.227  Sum_probs=64.1

Q ss_pred             eEEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCc
Q 002450          788 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGF  867 (920)
Q Consensus       788 fY~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF  867 (920)
                      ...+|++.+|+|||.+.++    .-++|..+.|+|+|||+|+|++|+..+++.++. |++.+.+.+...+.++|.+ +||
T Consensus        44 ~~~~v~~~~~~ivG~~~~~----~~~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~-~GF  117 (117)
T PF13673_consen   44 HTIFVAEEGGEIVGFAWLE----PDGEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRK-LGF  117 (117)
T ss_dssp             CEEEEEEETTEEEEEEEEE----TCEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHH-TT-
T ss_pred             CEEEEEEECCEEEEEEEEc----CCCeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHh-CCC
Confidence            3566779999999999986    345599999999999999999999999999988 9999999999999999986 998

>PRK10314 putative acyltransferase; Provisional

Probab=98.73  E-value=4.6e-08  Score=96.73  Aligned_cols=81  Identities=17%  Similarity=0.114  Sum_probs=69.9

Q ss_pred             EEeeCCeEEEEEEEEEeCC--eeeEeeeeeeccCccCCChhHHHHHHHHHHhhhc-CccEEEEcChhhhHHHHHhccCcE
Q 002450          792 ILTVNSSVVSAGILRVFGQ--EVAELPLVATSKINHGKGYFQLLFACIEKLLSFL-RVKSIVLPAAEEAESIWTDKFGFK  868 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G~--~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~L-gVe~LvlpA~~ea~~~Wt~kFGF~  868 (920)
                      ++..++++||+|.++..+.  ..++|--|||+++|||+|+|+.||.++++.++.. +...++|.|...+++||.+ |||.
T Consensus        52 ~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k-~GF~  130 (153)
T PRK10314         52 LGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQS-FGFI  130 (153)
T ss_pred             EEEECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHH-CCCE
Confidence            3456889999999876532  3688999999999999999999999999998775 7889999998889999986 9999


Q ss_pred             EcChH
Q 002450          869 KIDPE  873 (920)
Q Consensus       869 ~i~~~  873 (920)
                      .+++.
T Consensus       131 ~~g~~  135 (153)
T PRK10314        131 PVTEV  135 (153)
T ss_pred             ECCCc
Confidence            99874

>PTZ00330 acetyltransferase; Provisional

Probab=98.63  E-value=2e-07  Score=88.50  Aligned_cols=83  Identities=16%  Similarity=0.239  Sum_probs=70.9

Q ss_pred             EEEEEeeCCeEEEEEEEEEe------CCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHH
Q 002450          789 YCAILTVNSSVVSAGILRVF------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWT  862 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI~------G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt  862 (920)
                      +.++.+.+|++||.+.+.+.      +...++|--+.+.|+|||+|+|+.||..+++.++..|+.++++.+...+..+|.
T Consensus        53 ~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~  132 (147)
T PTZ00330         53 RVFVHSPTQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYK  132 (147)
T ss_pred             EEEEEeCCCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHH
Confidence            34444678999999988653      223578888999999999999999999999999999999999999989999998


Q ss_pred             hccCcEEcCh
Q 002450          863 DKFGFKKIDP  872 (920)
Q Consensus       863 ~kFGF~~i~~  872 (920)
                      + +||.....
T Consensus       133 k-~GF~~~~~  141 (147)
T PTZ00330        133 K-LGFRACER  141 (147)
T ss_pred             H-CCCEEece
Confidence            5 99998764

>PLN02825 amino-acid N-acetyltransferase

Probab=98.60  E-value=1.8e-07  Score=109.32  Aligned_cols=88  Identities=22%  Similarity=0.305  Sum_probs=76.1

Q ss_pred             EEeeCCeEEEEEEEEEeC-CeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEc
Q 002450          792 ILTVNSSVVSAGILRVFG-QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI  870 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G-~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i  870 (920)
                      |++.||+|||++++..+. .+.+||--+||+|+|||+|+|++||+++|+.++..|+++|++.+ ..+..+|. ++||...
T Consensus       411 V~e~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Llt-t~a~~fY~-k~GF~~~  488 (515)
T PLN02825        411 VVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLT-TRTADWFV-RRGFSEC  488 (515)
T ss_pred             EEEECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEe-CcHHHHHH-HCCCEEe
Confidence            458999999999987664 46899999999999999999999999999999999999999977 34566555 6999999


Q ss_pred             ChHHHHHHHHh
Q 002450          871 DPELLSIYRKR  881 (920)
Q Consensus       871 ~~~el~~~~~~  881 (920)
                      +.++|+.-++.
T Consensus       489 ~~~~lp~~~~~  499 (515)
T PLN02825        489 SIESLPEARRK  499 (515)
T ss_pred             ChhhCCHHHHh
Confidence            99998866664

>PLN02706 glucosamine 6-phosphate N-acetyltransferase

Probab=98.59  E-value=2.6e-07  Score=88.73  Aligned_cols=82  Identities=13%  Similarity=0.272  Sum_probs=68.1

Q ss_pred             EEEEEee--CCeEEEEEEEEEeC------CeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHH
Q 002450          789 YCAILTV--NSSVVSAGILRVFG------QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESI  860 (920)
Q Consensus       789 Y~~VLe~--~~~vVsaAslrI~G------~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~  860 (920)
                      |.++.+.  +++|||.+.+++..      ..++.+--++|.++|||||+|+.|+..+++.++.+|+++|++.+.++...+
T Consensus        54 ~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~  133 (150)
T PLN02706         54 LICVIEDAASGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAF  133 (150)
T ss_pred             EEEEEEeCCCCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHH
Confidence            3444444  68999999986432      255677779999999999999999999999999999999999988888899


Q ss_pred             HHhccCcEEcC
Q 002450          861 WTDKFGFKKID  871 (920)
Q Consensus       861 Wt~kFGF~~i~  871 (920)
                      |.+ +||....
T Consensus       134 y~k-~GF~~~g  143 (150)
T PLN02706        134 YEK-CGYVRKE  143 (150)
T ss_pred             HHH-CcCEEeh
Confidence            975 9999754

>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional

Probab=98.59  E-value=1.8e-07  Score=88.45  Aligned_cols=79  Identities=14%  Similarity=0.091  Sum_probs=67.3

Q ss_pred             EEEeeCCeEEEEEEEEEeC-----CeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcCh---hhhHHHHH
Q 002450          791 AILTVNSSVVSAGILRVFG-----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EEAESIWT  862 (920)
Q Consensus       791 ~VLe~~~~vVsaAslrI~G-----~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~---~ea~~~Wt  862 (920)
                      .|++.++++||.+.++...     ...++|.-++|.|+|||||+|+.||..+++.++..|...+.+.+.   ..+..+|.
T Consensus        50 ~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~  129 (144)
T PRK10146         50 HLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYL  129 (144)
T ss_pred             EEEEECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH
Confidence            3457789999999987642     235788899999999999999999999999999999999988765   47899998


Q ss_pred             hccCcEEc
Q 002450          863 DKFGFKKI  870 (920)
Q Consensus       863 ~kFGF~~i  870 (920)
                      + +||...
T Consensus       130 ~-~Gf~~~  136 (144)
T PRK10146        130 R-EGYEQS  136 (144)
T ss_pred             H-cCCchh
Confidence            6 999765

>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B

Probab=98.58  E-value=2.6e-07  Score=85.96  Aligned_cols=111  Identities=23%  Similarity=0.289  Sum_probs=79.2

Q ss_pred             HHHHHHHHhhccCcccccCcCCCcchhhhccccCCCceeCceEEEEEeeCCeEEEEEEEEEe-----CC--eeeEeeeee
Q 002450          747 LSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVF-----GQ--EVAELPLVA  819 (920)
Q Consensus       747 La~AL~I~~EcF~Pivd~rtgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~vVsaAslrI~-----G~--~vAElplvA  819 (920)
                      +.+..+++.++|.+-..+.      ..+-|..+.-.   .+ ++++...+|+|||.+.+-.+     |.  .++-|=-||
T Consensus        10 ~~~i~~l~~~~F~~~~~~~------~~~~~~~~~~~---~~-~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~   79 (127)
T PF13527_consen   10 FEQIIELFNEAFGDSESPP------EIWEYFRNLYG---PG-RCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVA   79 (127)
T ss_dssp             HHHHHHHHHHHTTT-CHHH------HHHHHHHHHHH---TT-EEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHCCCCCCch------hhhhhhhcccC---cC-cEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEE
Confidence            4566778889996654442      22333332211   12 56666789999998876433     44  579999999


Q ss_pred             eccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEc
Q 002450          820 TSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI  870 (920)
Q Consensus       820 T~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i  870 (920)
                      |.|+|||||+++.||.++++.++..|+..+++-+  ...++|. +|||..+
T Consensus        80 v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~--~~~~~Y~-~~G~~~~  127 (127)
T PF13527_consen   80 VDPEYRGRGLGRQLMRALLERARERGVPFIFLFP--SSPPFYR-RFGFEYA  127 (127)
T ss_dssp             E-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---SSHHHHH-HTTEEEE
T ss_pred             ECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--CChhhhh-cCCCEEC
Confidence            9999999999999999999999999999999877  3467886 5999864

...

>PRK07922 N-acetylglutamate synthase; Validated

Probab=98.55  E-value=2.9e-07  Score=92.29  Aligned_cols=80  Identities=20%  Similarity=0.324  Sum_probs=70.2

Q ss_pred             EEe-eCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEc
Q 002450          792 ILT-VNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI  870 (920)
Q Consensus       792 VLe-~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i  870 (920)
                      +++ .++++||.+.+.+...+.++|..++|+++|||+|+|+.|+.++++.++..|++++++...  ...+|.+ +||..+
T Consensus        49 va~~~~~~iiG~~~~~~~~~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~--~~~fY~k-~GF~~~  125 (169)
T PRK07922         49 VAEHLDGEVVGCGALHVMWEDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF--EVEFFAR-HGFVEI  125 (169)
T ss_pred             EEEecCCcEEEEEEEeecCCCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec--cHHHHHH-CCCEEC
Confidence            456 789999999988877788999999999999999999999999999999999999987653  4688885 999998


Q ss_pred             ChHH
Q 002450          871 DPEL  874 (920)
Q Consensus       871 ~~~e  874 (920)
                      +...
T Consensus       126 ~~~~  129 (169)
T PRK07922        126 DGTP  129 (169)
T ss_pred             cccc
Confidence            7543

>PRK03624 putative acetyltransferase; Provisional

Probab=98.53  E-value=3.1e-07  Score=85.08  Aligned_cols=84  Identities=20%  Similarity=0.148  Sum_probs=68.5

Q ss_pred             EEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChh---hhHHHHHhcc
Q 002450          789 YCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWTDKF  865 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~Wt~kF  865 (920)
                      +.+++..++++||.+.+...+ +.+.+..++|.++|||||+|+.|+..+++.+..+|++++.+-+.+   .+..+|. |+
T Consensus        46 ~~~v~~~~~~~vG~~~~~~~~-~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~-k~  123 (140)
T PRK03624         46 LFLVAEVGGEVVGTVMGGYDG-HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYE-AL  123 (140)
T ss_pred             eEEEEEcCCcEEEEEEeeccC-CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHH-Hc
Confidence            344557789999999887544 457788899999999999999999999999999999998776554   4778886 49


Q ss_pred             CcEEcChHH
Q 002450          866 GFKKIDPEL  874 (920)
Q Consensus       866 GF~~i~~~e  874 (920)
                      ||+..+...
T Consensus       124 GF~~~~~~~  132 (140)
T PRK03624        124 GYEEQDRIS  132 (140)
T ss_pred             CCccccEEe
Confidence            999766543

>cd02169 Citrate_lyase_ligase Citrate lyase ligase

Probab=98.50  E-value=3.4e-07  Score=100.49  Aligned_cols=74  Identities=15%  Similarity=0.196  Sum_probs=66.8

Q ss_pred             EEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEcC
Q 002450          792 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKID  871 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~  871 (920)
                      +.+.+|+|||++.+.-     .+|..+||+|+|||||+|+.||..+++.++..|+++++|.+...+.++|. ++||..++
T Consensus        10 v~~~~~~iVG~~~l~~-----~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYe-k~GF~~~~   83 (297)
T cd02169          10 IFDDAGELIATGSIAG-----NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFR-GLGFKELA   83 (297)
T ss_pred             EEEECCEEEEEEEecc-----CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHH-HCCCEEec
Confidence            3467799999998742     46899999999999999999999999999999999999999989999997 59999988

Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.

>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase

Probab=98.50  E-value=4.7e-07  Score=103.31  Aligned_cols=86  Identities=16%  Similarity=0.259  Sum_probs=74.2

Q ss_pred             EEeeCCeEEEEEEEEEeC-CeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEc
Q 002450          792 ILTVNSSVVSAGILRVFG-QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI  870 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G-~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i  870 (920)
                      |++.++++||++.+..+. ...+||-.++|.|+|||||+|+.||..+++.++..|.+++++.+. .+..+|. ++||+.+
T Consensus       326 V~~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~-~a~~fY~-k~GF~~~  403 (429)
T TIGR01890       326 IIEHDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTT-RTGHWFR-ERGFQTA  403 (429)
T ss_pred             EEEECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeec-chHHHHH-HCCCEEC
Confidence            447889999999998873 468999999999999999999999999999999999999887754 4678886 5999999


Q ss_pred             ChHHHHHHH
Q 002450          871 DPELLSIYR  879 (920)
Q Consensus       871 ~~~el~~~~  879 (920)
                      +..+++.-+
T Consensus       404 g~~~l~~~~  412 (429)
T TIGR01890       404 SVDELPEAR  412 (429)
T ss_pred             ChhhCCHHH
Confidence            998866443

This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.

>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase

Probab=98.49  E-value=1.1e-06  Score=80.58  Aligned_cols=79  Identities=18%  Similarity=0.225  Sum_probs=66.6

Q ss_pred             EEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEc---ChhhhHHHHHhccCcE
Q 002450          792 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP---AAEEAESIWTDKFGFK  868 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~Lvlp---A~~ea~~~Wt~kFGF~  868 (920)
                      ++..++++||.+.++... ....+-.++|.++|||||+|+.|+.++++.+...|..++++.   ....+..+|++ +||+
T Consensus        35 ~~~~~~~~vg~~~~~~~~-~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~-~Gf~  112 (131)
T TIGR01575        35 LARIGGKVVGYAGVQIVL-DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKK-LGFN  112 (131)
T ss_pred             EEecCCeEEEEEEEEecC-CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHH-cCCC
Confidence            345689999999987644 456788899999999999999999999999999999999984   44557889975 9999


Q ss_pred             EcCh
Q 002450          869 KIDP  872 (920)
Q Consensus       869 ~i~~  872 (920)
                      .++.
T Consensus       113 ~~~~  116 (131)
T TIGR01575       113 EIAI  116 (131)
T ss_pred             cccc
Confidence            8765

Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.

>KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription]

Probab=98.48  E-value=4e-08  Score=104.87  Aligned_cols=52  Identities=33%  Similarity=0.841  Sum_probs=44.3

Q ss_pred             cccccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcchhH
Q 002450          628 ELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI  690 (920)
Q Consensus       628 e~~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~~I  690 (920)
                      +...|.+|+..+      +++.+|+||-|+++||++||.|    ++.+.|+|.|-| .-|.+.
T Consensus       280 eck~csicgtse------nddqllfcddcdrgyhmyclsp----pm~eppegswsc-~KOG~~  331 (336)
T KOG1244|consen  280 ECKYCSICGTSE------NDDQLLFCDDCDRGYHMYCLSP----PMVEPPEGSWSC-HLCLEE  331 (336)
T ss_pred             ecceeccccCcC------CCceeEeecccCCceeeEecCC----CcCCCCCCchhH-HHHHHH
Confidence            345799998754      5789999999999999999999    788999999999 778643

>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase

Probab=98.42  E-value=1.1e-06  Score=89.12  Aligned_cols=80  Identities=11%  Similarity=0.024  Sum_probs=68.6

Q ss_pred             EEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChh---hhHHHHHhccCcE
Q 002450          792 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWTDKFGFK  868 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~Wt~kFGF~  868 (920)
                      +.+.+|++||.+.++......+++-.+++.++|||||+|+.|+.++++.+..+|+.+|++....   .+..+|.+ +||+
T Consensus       103 ~~~~~g~iiG~i~l~~~~~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~k-lGF~  181 (191)
T TIGR02382       103 LRDASGDPRGYVTLRELNDTDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIR-SGAN  181 (191)
T ss_pred             EEccCCeEEEEEEEEecCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHH-cCCc
Confidence            3456889999999987765678999999999999999999999999999999999999987433   47889985 9998


Q ss_pred             EcCh
Q 002450          869 KIDP  872 (920)
Q Consensus       869 ~i~~  872 (920)
                      ....
T Consensus       182 ~~~~  185 (191)
T TIGR02382       182 IEST  185 (191)
T ss_pred             cccc
Confidence            6543

This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).

>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase

Probab=98.38  E-value=1.7e-06  Score=92.67  Aligned_cols=83  Identities=16%  Similarity=0.161  Sum_probs=69.3

Q ss_pred             EEEEEeeCCeEEEEEEEEEe-CCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhh---HHHHHhc
Q 002450          789 YCAILTVNSSVVSAGILRVF-GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEA---ESIWTDK  864 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI~-G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea---~~~Wt~k  864 (920)
                      +.++++.+|++||.+++.+. +...+||--++|.|+|||||+|+.||..+++.++..|+.++++.+....   ..+|. |
T Consensus       159 ~~~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~-k  237 (266)
T TIGR03827       159 VYFGVEDGGKIIALASAEMDPENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFA-R  237 (266)
T ss_pred             EEEEEEECCEEEEEEEEecCCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHH-H
Confidence            33455779999999998653 3467999999999999999999999999999999999999999877654   45675 5


Q ss_pred             cCcEEcCh
Q 002450          865 FGFKKIDP  872 (920)
Q Consensus       865 FGF~~i~~  872 (920)
                      +||+..+.
T Consensus       238 ~GF~~~G~  245 (266)
T TIGR03827       238 LGYAYGGT  245 (266)
T ss_pred             cCCccccE
Confidence            99997654

Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.

>KOG0825 consensus PHD Zn-finger protein [General function prediction only]

Probab=98.38  E-value=1e-07  Score=112.35  Aligned_cols=53  Identities=40%  Similarity=0.918  Sum_probs=46.0

Q ss_pred             ccccccccccCCCCCCCCCCCCceeecCCCCCc-cccccCccCcCCccCCCCCcceeecCcchhH
Q 002450          627 AELSGCLLCRGCDFSKSGFGPRTILLCDQCERE-FHVGCLKKHKMADLRELPKGKWFCCMDCSRI  690 (920)
Q Consensus       627 ~e~~~C~vC~~~df~~sgf~~~~LLlCDQCer~-YHv~CL~p~~~~~L~evP~g~WFC~~~C~~I  690 (920)
                      .+.-.|.+|..+|.      .+.||+||.|..+ ||++||+|    +|-++|.+.||| .+|..+
T Consensus       213 ~E~~~C~IC~~~Dp------EdVLLLCDsCN~~~YH~YCLDP----dl~eiP~~eWYC-~NC~dL  266 (1134)
T KOG0825|consen  213 QEEVKCDICTVHDP------EDVLLLCDSCNKVYYHVYCLDP----DLSESPVNEWYC-TNCSLL  266 (1134)
T ss_pred             cccccceeeccCCh------HHhheeecccccceeeccccCc----ccccccccceec-Ccchhh
Confidence            34568999999773      5789999999999 99999999    899999999999 899643

>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase

Probab=98.35  E-value=1.3e-06  Score=97.32  Aligned_cols=81  Identities=17%  Similarity=0.216  Sum_probs=71.8

Q ss_pred             eEEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCc
Q 002450          788 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGF  867 (920)
Q Consensus       788 fY~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF  867 (920)
                      -|++++..+|+|||+|++  .|.   .|.-|||+++|||+|+|+.||.++++.+...|+.++++.+.+.+..+|. ++||
T Consensus        31 d~~vv~~~~~~lVg~g~l--~g~---~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~-klGF  104 (332)
T TIGR00124        31 EIFIAVYEDEEIIGCGGI--AGN---VIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFE-YCGF  104 (332)
T ss_pred             CEEEEEEECCEEEEEEEE--ecC---EEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHH-HcCC
Confidence            367777889999999997  342   4889999999999999999999999999999999999999999988876 5999


Q ss_pred             EEcChHH
Q 002450          868 KKIDPEL  874 (920)
Q Consensus       868 ~~i~~~e  874 (920)
                      ..+...+
T Consensus       105 ~~i~~~~  111 (332)
T TIGR00124       105 KTLAEAK  111 (332)
T ss_pred             EEeeeec
Confidence            9998644

ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.

>PRK05279 N-acetylglutamate synthase; Validated

Probab=98.35  E-value=1.5e-06  Score=99.51  Aligned_cols=84  Identities=18%  Similarity=0.262  Sum_probs=72.6

Q ss_pred             EEeeCCeEEEEEEEEEeC-CeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEc
Q 002450          792 ILTVNSSVVSAGILRVFG-QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKI  870 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G-~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i  870 (920)
                      +++.+|++||.+.+..+. ...++|--++|.|+|||||+|++||.++++.++..|+.++++.+ ..+..||. ++||..+
T Consensus       338 va~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~-~~a~~fY~-k~GF~~~  415 (441)
T PRK05279        338 VIERDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT-TRTAHWFL-ERGFVPV  415 (441)
T ss_pred             EEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec-chHHHHHH-HCcCEEC
Confidence            457889999999877653 46899999999999999999999999999999999999998765 45788887 5999999


Q ss_pred             ChHHHHH
Q 002450          871 DPELLSI  877 (920)
Q Consensus       871 ~~~el~~  877 (920)
                      +.++++.
T Consensus       416 g~~~~~~  422 (441)
T PRK05279        416 DVDDLPE  422 (441)
T ss_pred             ChhhCcH
Confidence            9877653

>PRK10975 TDP-fucosamine acetyltransferase; Provisional

Probab=98.35  E-value=2.1e-06  Score=87.00  Aligned_cols=83  Identities=12%  Similarity=0.074  Sum_probs=69.3

Q ss_pred             eEEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcCh---hhhHHHHHhc
Q 002450          788 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EEAESIWTDK  864 (920)
Q Consensus       788 fY~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~---~ea~~~Wt~k  864 (920)
                      ++.++.+.+|++||.+.+...+...+++-.+++.++|||||+|+.|+..+++.++..|+.++++...   +.+..+|. |
T Consensus       102 ~~~v~~~~~g~~vG~~~l~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~ye-k  180 (194)
T PRK10975        102 QCLLLRDASGQIQGFVTLRELNDTDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYI-R  180 (194)
T ss_pred             cEEEEEcCCCCEEEEEEEEecCCCceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHH-H
Confidence            3434445678999999998766667899999999999999999999999999999999999987644   45788887 5


Q ss_pred             cCcEEcC
Q 002450          865 FGFKKID  871 (920)
Q Consensus       865 FGF~~i~  871 (920)
                      +||....
T Consensus       181 ~Gf~~~~  187 (194)
T PRK10975        181 SGANIES  187 (194)
T ss_pred             CCCeEeE
Confidence            9999765

>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional

Probab=98.34  E-value=1.4e-06  Score=103.96  Aligned_cols=82  Identities=15%  Similarity=0.206  Sum_probs=73.0

Q ss_pred             EEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEcC
Q 002450          792 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKID  871 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~  871 (920)
                      |++.+|+|||.+.+.+.....++|-.++|.|+|||||+|+.||+.+++.++..|++++++.+.  +..||. |+||+..+
T Consensus       507 Va~~~g~IVG~~~l~~~~~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~--a~~FYe-k~GF~~~~  583 (614)
T PRK12308        507 VAEHHGEVTGCASLYIYDSGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR--VPEFFM-KQGFSPTS  583 (614)
T ss_pred             EEEECCEEEEEEEEEEcCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC--cHHHHH-HCCCEECC
Confidence            457889999999998877678999999999999999999999999999999999999988753  467887 59999999


Q ss_pred             hHHHH
Q 002450          872 PELLS  876 (920)
Q Consensus       872 ~~el~  876 (920)
                      ..+++
T Consensus       584 ~~~~~  588 (614)
T PRK12308        584 KSLLP  588 (614)
T ss_pred             cccCC
Confidence            88765

>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional

Probab=98.31  E-value=4.1e-06  Score=80.31  Aligned_cols=84  Identities=20%  Similarity=0.196  Sum_probs=68.9

Q ss_pred             ceEEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcC---hhhhHHHHHh
Q 002450          787 GMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPA---AEEAESIWTD  863 (920)
Q Consensus       787 GfY~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA---~~ea~~~Wt~  863 (920)
                      +|+..++..++++||.+.++.... .+++-.++|.++|||||+|+.|+..+++.+...|+..+++.+   -..+..+|.+
T Consensus        39 ~~~~~~~~~~~~~vG~~~~~~~~~-~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k  117 (146)
T PRK09491         39 RYLNLKLTVNGQMAAFAITQVVLD-EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYES  117 (146)
T ss_pred             CceEEEEEECCeEEEEEEEEeecC-ceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHH
Confidence            455555678899999999887653 456778899999999999999999999999999999988753   3457888875


Q ss_pred             ccCcEEcCh
Q 002450          864 KFGFKKIDP  872 (920)
Q Consensus       864 kFGF~~i~~  872 (920)
                       +||+..+.
T Consensus       118 -~Gf~~~~~  125 (146)
T PRK09491        118 -LGFNEVTI  125 (146)
T ss_pred             -cCCEEeee
Confidence             99997764

>PHA00673 acetyltransferase domain containing protein

Probab=98.22  E-value=7.8e-06  Score=82.32  Aligned_cols=83  Identities=14%  Similarity=0.121  Sum_probs=72.4

Q ss_pred             EEEEEeeCCeEEEEEEEEEe------CCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhh--hHHH
Q 002450          789 YCAILTVNSSVVSAGILRVF------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE--AESI  860 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI~------G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e--a~~~  860 (920)
                      ..+|.+.+|+|||.+.+.+.      |...+.|-.|-|++++||||+|++||..+++.++..|...|.+.|.|+  .+.|
T Consensus        56 ~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~f  135 (154)
T PHA00673         56 HFLGVFRGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQL  135 (154)
T ss_pred             EEEEEEECCEEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHH
Confidence            44455779999999998875      347788999999999999999999999999999999999999999997  6999


Q ss_pred             HHhccCcEEcCh
Q 002450          861 WTDKFGFKKIDP  872 (920)
Q Consensus       861 Wt~kFGF~~i~~  872 (920)
                      |.+ .|++....
T Consensus       136 y~~-~g~~~~~~  146 (154)
T PHA00673        136 LPA-AGYRETNR  146 (154)
T ss_pred             HHh-CCchhhch
Confidence            996 99986543

>COG5141 PHD zinc finger-containing protein [General function prediction only]

Probab=98.20  E-value=4.3e-07  Score=103.05  Aligned_cols=106  Identities=24%  Similarity=0.578  Sum_probs=69.8

Q ss_pred             CCCcccCCCCCccCcchhcccccccccCCCCCCCccCccch--------hhhhhc--cccc-cchhhhhc----------
Q 002450          544 GLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQ--------NMFERK--RFLQ-HDANAVEA----------  602 (920)
Q Consensus       544 gdGI~CdCCn~evcPS~FEaHa~CL~LesIPsGdW~Cp~C~--------~~f~~e--k~~~-~n~Na~aa----------  602 (920)
                      ...++|+.|+..|       |+.|+++.-+|+|.|+|+.|.        |.||+.  +.+. ...+.|.+          
T Consensus       208 naiVfCdgC~i~V-------Hq~CYGI~f~peG~WlCrkCi~~~~~i~~C~fCps~dGaFkqT~dgrW~H~iCA~~~pel  280 (669)
T COG5141         208 NAIVFCDGCEICV-------HQSCYGIQFLPEGFWLCRKCIYGEYQIRCCSFCPSSDGAFKQTSDGRWGHVICAMFNPEL  280 (669)
T ss_pred             ceEEEecCcchhh-------hhhcccceecCcchhhhhhhcccccceeEEEeccCCCCceeeccCCchHhHhHHHhcchh
Confidence            3457899998754       999999999999999999994        456652  3332 23333432          


Q ss_pred             --cccCCCChhhHHhhhhhhhhccccccccccccccCCCCCCCCCCCCceeecC--CCCCccccccCccCcC
Q 002450          603 --GRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCLKKHKM  670 (920)
Q Consensus       603 --g~i~gvD~~e~i~~RC~R~vk~~e~e~~~C~vC~~~df~~sgf~~~~LLlCD--QCer~YHv~CL~p~~~  670 (920)
                        +...-.|+++.+..-.      ....-..|.+|+..        .|+.+.|.  .|-++||++|.+..+.
T Consensus       281 sF~~l~~~dpI~~i~sVs------~srwkl~C~iCk~~--------~GtcIqCs~~nC~~aYHVtCArrag~  338 (669)
T COG5141         281 SFGHLLSKDPIDNIASVS------SSRWKLGCLICKEF--------GGTCIQCSYFNCTRAYHVTCARRAGY  338 (669)
T ss_pred             ccccccccchhhhhcccc------hhhHhheeeEEccc--------Ccceeeecccchhhhhhhhhhhhcch
Confidence              2233345544432100      01112479999873        47888898  5999999999988654

>KOG1512 consensus PHD Zn-finger protein [General function prediction only]

Probab=98.19  E-value=4.4e-07  Score=97.58  Aligned_cols=91  Identities=30%  Similarity=0.693  Sum_probs=66.9

Q ss_pred             CCeeeecceecCCCcccCCCCCccCcchhcccccccccC-----CCCCCCccCccchhhhhhccccccchhhhhccccCC
Q 002450          533 CGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLS-----SIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSG  607 (920)
Q Consensus       533 ~gq~lL~G~ktgdGI~CdCCn~evcPS~FEaHa~CL~Le-----sIPsGdW~Cp~C~~~f~~ek~~~~n~Na~aag~i~g  607 (920)
                      +||.-..--+....|+|.-|..     +.  |-.|+.+.     .+-.-.|.|-.|.                       
T Consensus       266 ~~~~~~~~~r~~S~I~C~~C~~-----~~--HP~Ci~M~~elv~~~KTY~W~C~~C~-----------------------  315 (381)
T KOG1512|consen  266 DIQTNIIQSRRNSWIVCKPCAT-----RP--HPYCVAMIPELVGQYKTYFWKCSSCE-----------------------  315 (381)
T ss_pred             cchhhhhhhhhccceeeccccc-----CC--CCcchhcCHHHHhHHhhcchhhcccH-----------------------
Confidence            4443333335678899999954     34  88888742     2334568887774                       


Q ss_pred             CChhhHHhhhhhhhhccccccccccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcc
Q 002450          608 VDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDC  687 (920)
Q Consensus       608 vD~~e~i~~RC~R~vk~~e~e~~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C  687 (920)
                                             .|.||+++..      ++++++||.|+++||..|+.      |..+|.|.|.|-..|
T Consensus       316 -----------------------lC~IC~~P~~------E~E~~FCD~CDRG~HT~CVG------L~~lP~G~WICD~~C  360 (381)
T KOG1512|consen  316 -----------------------LCRICLGPVI------ESEHLFCDVCDRGPHTLCVG------LQDLPRGEWICDMRC  360 (381)
T ss_pred             -----------------------hhhccCCccc------chheeccccccCCCCccccc------cccccCccchhhhHH
Confidence                                   5899988652      57899999999999999994      788999999995557


Q ss_pred             h
Q 002450          688 S  688 (920)
Q Consensus       688 ~  688 (920)
                      .
T Consensus       361 ~  361 (381)
T KOG1512|consen  361 R  361 (381)
T ss_pred             H
Confidence            5

>PRK10140 putative acetyltransferase YhhY; Provisional

Probab=98.14  E-value=1.3e-05  Score=77.01  Aligned_cols=85  Identities=19%  Similarity=0.245  Sum_probs=66.7

Q ss_pred             eEEEEEeeCCeEEEEEEEEEeC----CeeeEeeeeeeccCccCCChhHHHHHHHHHHhhh-cCccEEEEcCh---hhhHH
Q 002450          788 MYCAILTVNSSVVSAGILRVFG----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSF-LRVKSIVLPAA---EEAES  859 (920)
Q Consensus       788 fY~~VLe~~~~vVsaAslrI~G----~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~-LgVe~LvlpA~---~ea~~  859 (920)
                      .+.++.+.+|++||.+.+....    ...+|+- +++.++|||||+|+.|+..+++.+.. +|..++++...   ..+..
T Consensus        51 ~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~-~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~  129 (162)
T PRK10140         51 IKQLVACIDGDVVGHLTIDVQQRPRRSHVADFG-ICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIK  129 (162)
T ss_pred             cEEEEEEECCEEEEEEEEecccccccceEEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHH
Confidence            3555667889999999987531    2456664 89999999999999999999999888 79888776553   45778


Q ss_pred             HHHhccCcEEcChHH
Q 002450          860 IWTDKFGFKKIDPEL  874 (920)
Q Consensus       860 ~Wt~kFGF~~i~~~e  874 (920)
                      ++. ++||+..+...
T Consensus       130 ~y~-k~GF~~~g~~~  143 (162)
T PRK10140        130 VYK-KYGFEIEGTGK  143 (162)
T ss_pred             HHH-HCCCEEEeecc
Confidence            887 59999877643

>PRK09831 putative acyltransferase; Provisional

Probab=98.11  E-value=9e-06  Score=78.64  Aligned_cols=72  Identities=14%  Similarity=0.161  Sum_probs=59.4

Q ss_pred             EEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEcC
Q 002450          792 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKID  871 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~  871 (920)
                      |+..+|++||.+.+.-     ..+..++|.|+|||||+|++||..+++.+..     +.+.+...+..+|.+ +||..++
T Consensus        57 v~~~~~~iiG~~~~~~-----~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~v~~~~~a~~~Y~k-~Gf~~~g  125 (147)
T PRK09831         57 VAVINAQPVGFITCIE-----HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LTVDASITAKPFFER-YGFQTVK  125 (147)
T ss_pred             EEEECCEEEEEEEehh-----ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eEeecchhhHHHHHH-CCCEEee
Confidence            4478899999988732     4567899999999999999999999998766     455566778999986 9999998


Q ss_pred             hHH
Q 002450          872 PEL  874 (920)
Q Consensus       872 ~~e  874 (920)
                      ...
T Consensus       126 ~~~  128 (147)
T PRK09831        126 QQR  128 (147)
T ss_pred             ccc
Confidence            765

>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase

Probab=98.09  E-value=2e-05  Score=84.12  Aligned_cols=80  Identities=8%  Similarity=0.008  Sum_probs=62.8

Q ss_pred             EEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcCh-hhhHHHHHhccCcE
Q 002450          790 CAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA-EEAESIWTDKFGFK  868 (920)
Q Consensus       790 ~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~-~ea~~~Wt~kFGF~  868 (920)
                      .+|...+|++||.+.+.......+++-.++|+|+|||||+|+.||..+++.+.  +--.|++... ..+..+|.+ +||.
T Consensus        48 ~~~~~~~~~~vG~~~~~~~~~~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~--~~~~~~~~~~n~~a~~fy~~-~Gf~  124 (292)
T TIGR03448        48 HLVAVDSDPIVGYANLVPARGTDPAMAELVVHPAHRRRGIGRALIRALLAKGG--GRLRVWAHGDLPAARALASR-LGLV  124 (292)
T ss_pred             EEEEEECCEEEEEEEEEcCCCCcceEEEEEECHhhcCCCHHHHHHHHHHHhcc--CceEEEEcCCCHHHHHHHHH-CCCE
Confidence            34456789999999988875555788889999999999999999999999865  2335555543 467888875 9998


Q ss_pred             EcCh
Q 002450          869 KIDP  872 (920)
Q Consensus       869 ~i~~  872 (920)
                      .+..
T Consensus       125 ~~~~  128 (292)
T TIGR03448       125 PTRE  128 (292)
T ss_pred             EccE
Confidence            7754

Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.

>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase

Probab=98.06  E-value=1.5e-05  Score=85.08  Aligned_cols=86  Identities=15%  Similarity=0.206  Sum_probs=67.9

Q ss_pred             CceEEEEEeeCCeEEEEEEEEEeCC--eeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChh---hhHHH
Q 002450          786 GGMYCAILTVNSSVVSAGILRVFGQ--EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESI  860 (920)
Q Consensus       786 ~GfY~~VLe~~~~vVsaAslrI~G~--~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~  860 (920)
                      .++|.++-..+|++||.+.+++...  ..+++-.++|.++|||||+|+.|+..+++.++..|+.++++...+   .+..+
T Consensus       198 ~~~~~a~~~~~~~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~  277 (292)
T TIGR03448       198 AGLFLAFDDAPGELLGFHWTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRT  277 (292)
T ss_pred             CceEEEEECCCCcEEEEEEEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHH
Confidence            3556553222689999877766542  467888899999999999999999999999999999988876543   57899


Q ss_pred             HHhccCcEEcCh
Q 002450          861 WTDKFGFKKIDP  872 (920)
Q Consensus       861 Wt~kFGF~~i~~  872 (920)
                      |.+ +||+....
T Consensus       278 y~k-~GF~~~~~  288 (292)
T TIGR03448       278 YEK-LGFTVAEV  288 (292)
T ss_pred             HHH-cCCEEccc
Confidence            985 99997653

Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.

>PRK13688 hypothetical protein; Provisional

Probab=98.04  E-value=1.8e-05  Score=79.40  Aligned_cols=74  Identities=19%  Similarity=0.274  Sum_probs=57.5

Q ss_pred             eeCCeEEEEEEEEEe----------CCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHh
Q 002450          794 TVNSSVVSAGILRVF----------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTD  863 (920)
Q Consensus       794 e~~~~vVsaAslrI~----------G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~  863 (920)
                      ..++++||.+.+...          ..+.++|--++|.++|||||+|++||..+++.    ++. +.+.+...+..+|.+
T Consensus        51 ~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~~~----~~~-~~~~~~~~a~~FY~k  125 (156)
T PRK13688         51 YYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAKSF----QLP-IKTIARNKSKDFWLK  125 (156)
T ss_pred             EECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHh----CCe-EEEEeccchHHHHHh
Confidence            567899998887542          24678999999999999999999999876553    333 344456678899985


Q ss_pred             ccCcEEcChH
Q 002450          864 KFGFKKIDPE  873 (920)
Q Consensus       864 kFGF~~i~~~  873 (920)
                       +||..++..
T Consensus       126 -~GF~~~~~~  134 (156)
T PRK13688        126 -LGFTPVEYK  134 (156)
T ss_pred             -CCCEEeEEe
Confidence             999988765

>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate

Probab=97.93  E-value=4.2e-05  Score=59.94  Aligned_cols=60  Identities=20%  Similarity=0.126  Sum_probs=54.0

Q ss_pred             EEeeCCeEEEEEEEEEeC--CeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEE
Q 002450          792 ILTVNSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVL  851 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G--~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~Lvl  851 (920)
                      ++..++++||.+.+....  ...+++-.++|.++|||+|+++.|+..+.+.+...|.+++++
T Consensus         3 ~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~   64 (65)
T cd04301           3 VAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL   64 (65)
T ss_pred             EEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence            346778999999988765  488999999999999999999999999999999999999875

NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera

>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase

Probab=97.92  E-value=4.3e-05  Score=75.58  Aligned_cols=82  Identities=12%  Similarity=0.094  Sum_probs=64.2

Q ss_pred             EEEEEe-eCCeEEEEEEEEE--eCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcC---hhhhHHHHH
Q 002450          789 YCAILT-VNSSVVSAGILRV--FGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPA---AEEAESIWT  862 (920)
Q Consensus       789 Y~~VLe-~~~~vVsaAslrI--~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA---~~ea~~~Wt  862 (920)
                      +.+|.+ .+|++||.+.+..  ...+.+.+-.+||.++|||||+|+.|+..+++.+...++.++.+..   -..+..+|.
T Consensus        40 ~~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~  119 (157)
T TIGR02406        40 TSIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFK  119 (157)
T ss_pred             cEEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHH
Confidence            344556 4679999886543  2346688889999999999999999999999999988888887654   345677887


Q ss_pred             hccCcEEcC
Q 002450          863 DKFGFKKID  871 (920)
Q Consensus       863 ~kFGF~~i~  871 (920)
                      + +||+...
T Consensus       120 k-~G~~~~~  127 (157)
T TIGR02406       120 A-LARRRGV  127 (157)
T ss_pred             H-hCcccCC
Confidence            5 9998643

This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.

>COG0456 RimI Acetyltransferases [General function prediction only]

Probab=97.90  E-value=3.2e-05  Score=75.51  Aligned_cols=76  Identities=22%  Similarity=0.248  Sum_probs=62.2

Q ss_pred             eEEEEEEEEE-eCCe----eeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCc-cEEEEcChhh---hHHHHHhccCcE
Q 002450          798 SVVSAGILRV-FGQE----VAELPLVATSKINHGKGYFQLLFACIEKLLSFLRV-KSIVLPAAEE---AESIWTDKFGFK  868 (920)
Q Consensus       798 ~vVsaAslrI-~G~~----vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgV-e~LvlpA~~e---a~~~Wt~kFGF~  868 (920)
                      +++|....++ .|..    -++|-.+||.|+|||+|+|++|+..+++.+...+. +.++|-.+.+   |..+|.+ +||.
T Consensus        72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~-~GF~  150 (177)
T COG0456          72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRK-LGFE  150 (177)
T ss_pred             ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHH-cCCE
Confidence            5888887754 3432    78999999999999999999999999999999886 7777776653   7888875 9999


Q ss_pred             EcChHH
Q 002450          869 KIDPEL  874 (920)
Q Consensus       869 ~i~~~e  874 (920)
                      .+....
T Consensus       151 ~~~~~~  156 (177)
T COG0456         151 VVKIRK  156 (177)
T ss_pred             EEeeeh
Confidence            876544

>KOG3139 consensus N-acetyltransferase [General function prediction only]

Probab=97.90  E-value=4.7e-05  Score=77.05  Aligned_cols=74  Identities=16%  Similarity=0.155  Sum_probs=62.5

Q ss_pred             EEEEEEEEEeC---CeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChh---hhHHHHHhccCcEEcCh
Q 002450          799 VVSAGILRVFG---QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWTDKFGFKKIDP  872 (920)
Q Consensus       799 vVsaAslrI~G---~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~Wt~kFGF~~i~~  872 (920)
                      .|||+.....-   ..-++|-.+||.++|||||+|++|+..+.+.+++.|...++|.+..   .|...|.+ |||.....
T Consensus        68 ~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~s-LGF~r~~r  146 (165)
T KOG3139|consen   68 TVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYES-LGFKRDKR  146 (165)
T ss_pred             eEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHh-cCceEecc
Confidence            47777666532   3459999999999999999999999999999999999999998765   57889986 99998654


Q ss_pred             H
Q 002450          873 E  873 (920)
Q Consensus       873 ~  873 (920)
                      .
T Consensus       147 ~  147 (165)
T KOG3139|consen  147 L  147 (165)
T ss_pred             e
Confidence            3

>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A

Probab=97.88  E-value=8.9e-05  Score=71.22  Aligned_cols=76  Identities=22%  Similarity=0.274  Sum_probs=61.9

Q ss_pred             eCCeEEEEEEEEEeC--CeeeEeeeeeeccCccCCChhHHHHHHHHHHh-hhcCccEEEEcCh---hhhHHHHHhccCcE
Q 002450          795 VNSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLL-SFLRVKSIVLPAA---EEAESIWTDKFGFK  868 (920)
Q Consensus       795 ~~~~vVsaAslrI~G--~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L-~~LgVe~LvlpA~---~ea~~~Wt~kFGF~  868 (920)
                      .+|++||.+.++-..  ...|++-+ -+.++||++|+|+.|+..+++.+ ..+|+++|.+-..   ..+..+|.+ +||+
T Consensus        58 ~~g~iiG~~~~~~~~~~~~~~~~~~-~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~-~GF~  135 (155)
T PF13420_consen   58 EDGKIIGYVSLRDIDPYNHTAELSI-YVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKK-LGFE  135 (155)
T ss_dssp             CTTEEEEEEEEEESSSGTTEEEEEE-EEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHH-TTEE
T ss_pred             cCCcEEEEEEEEeeeccCCEEEEee-EEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHh-CCCE
Confidence            599999999998653  36788774 44499999999999999999999 9999999985433   357899986 9999


Q ss_pred             EcCh
Q 002450          869 KIDP  872 (920)
Q Consensus       869 ~i~~  872 (920)
                      ....
T Consensus       136 ~~g~  139 (155)
T PF13420_consen  136 EEGE  139 (155)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8764

...

>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only]

Probab=97.86  E-value=6.5e-06  Score=102.15  Aligned_cols=116  Identities=26%  Similarity=0.568  Sum_probs=76.9

Q ss_pred             eCCeeeecceec--CCCcccCCCCCccCcchhcccccccccCCCCCCCccCccchh--------hhhh--cccccc-chh
Q 002450          532 ACGQKLLEGYKN--GLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQN--------MFER--KRFLQH-DAN  598 (920)
Q Consensus       532 ~~gq~lL~G~kt--gdGI~CdCCn~evcPS~FEaHa~CL~LesIPsGdW~Cp~C~~--------~f~~--ek~~~~-n~N  598 (920)
                      ....+.++|-.+  ..-++||.||..|       |+.|+++.-||+|.|+|..|..        .+|+  ++.+.+ ...
T Consensus       220 ~~C~iC~~~~~~n~n~ivfCD~Cnl~V-------Hq~Cygi~~ipeg~WlCr~Cl~s~~~~v~c~~cp~~~gAFkqt~dg  292 (1051)
T KOG0955|consen  220 AVCCICLDGECQNSNVIVFCDGCNLAV-------HQECYGIPFIPEGQWLCRRCLQSPQRPVRCLLCPSKGGAFKQTDDG  292 (1051)
T ss_pred             ccceeecccccCCCceEEEcCCCcchh-------hhhccCCCCCCCCcEeehhhccCcCcccceEeccCCCCcceeccCC
Confidence            356788899888  7778999999854       9999999999999999999952        2332  233222 222


Q ss_pred             hhhcc---------------ccCCCChhhHHhhhhhhhhccccccccccccccCCCCCCCCCCCCceeecC--CCCCccc
Q 002450          599 AVEAG---------------RVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCD--QCEREFH  661 (920)
Q Consensus       599 a~aag---------------~i~gvD~~e~i~~RC~R~vk~~e~e~~~C~vC~~~df~~sgf~~~~LLlCD--QCer~YH  661 (920)
                      .|++.               .+++++.++.|..-.+         .-.|++|+..       +.+..+.|.  .|-.+||
T Consensus       293 rw~Hv~caiwipev~F~nt~~~E~I~~i~~i~~aRw---------kL~cy~cK~~-------~~gaciqcs~~~c~~a~h  356 (1051)
T KOG0955|consen  293 RWAHVVCAIWIPEVSFANTVFLEPIDSIENIPPARW---------KLTCYICKQK-------GLGACIQCSKANCYTAFH  356 (1051)
T ss_pred             ceeeeehhhcccccccccchhhccccchhcCcHhhh---------hceeeeeccC-------CCCcceecchhhhhhhhh
Confidence            34321               1333444333321111         2479999873       236677777  5788999


Q ss_pred             cccCccCcC
Q 002450          662 VGCLKKHKM  670 (920)
Q Consensus       662 v~CL~p~~~  670 (920)
                      ++|.+..+.
T Consensus       357 vtca~~agl  365 (1051)
T KOG0955|consen  357 VTCARRAGL  365 (1051)
T ss_pred             hhhHhhcCc
Confidence            999988653

>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103

Probab=97.83  E-value=6.5e-05  Score=88.89  Aligned_cols=84  Identities=12%  Similarity=0.131  Sum_probs=65.7

Q ss_pred             eEEEEEee--CCeEEEEEEEEEe------CCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcCh---hh
Q 002450          788 MYCAILTV--NSSVVSAGILRVF------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EE  856 (920)
Q Consensus       788 fY~~VLe~--~~~vVsaAslrI~------G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~---~e  856 (920)
                      .+.+|.+.  +|+|||.+..-.+      ....++|--++|.|+|||||+|++||..+++.++..|+.++++...   ..
T Consensus       123 ~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~  202 (547)
T TIGR03103       123 ITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQ  202 (547)
T ss_pred             ceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHH
Confidence            34444453  6899999875322      2234788889999999999999999999999999999999876533   56


Q ss_pred             hHHHHHhccCcEEcCh
Q 002450          857 AESIWTDKFGFKKIDP  872 (920)
Q Consensus       857 a~~~Wt~kFGF~~i~~  872 (920)
                      +..+|.+ +||..++.
T Consensus       203 Ai~fY~k-lGf~~~~~  217 (547)
T TIGR03103       203 AIALYEK-LGFRRIPV  217 (547)
T ss_pred             HHHHHHH-CCCEEeeE
Confidence            8899975 99987643

Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.

>TIGR01686 FkbH FkbH-like domain

Probab=97.78  E-value=8.9e-05  Score=81.70  Aligned_cols=82  Identities=11%  Similarity=0.026  Sum_probs=68.3

Q ss_pred             ceEEEEEee---CCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcCh-----hhhH
Q 002450          787 GMYCAILTV---NSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA-----EEAE  858 (920)
Q Consensus       787 GfY~~VLe~---~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~-----~ea~  858 (920)
                      ..|++.+..   ++.+||.+.++..+ +.++|-.+++++.|||+|+|++||.++++.++..|+.+|++...     ..+.
T Consensus       230 ~~~~~~~~d~~gd~givG~~~~~~~~-~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~  308 (320)
T TIGR01686       230 EIVTVSMSDRFGDSGIIGIFVFEKKE-GNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFL  308 (320)
T ss_pred             CEEEEEEEecCCCCceEEEEEEEecC-CcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHH
Confidence            356665543   57899999988754 67899999999999999999999999999999999999988543     3688


Q ss_pred             HHHHhccCcEEc
Q 002450          859 SIWTDKFGFKKI  870 (920)
Q Consensus       859 ~~Wt~kFGF~~i  870 (920)
                      .||.+ +||...
T Consensus       309 ~fY~~-~GF~~~  319 (320)
T TIGR01686       309 SFYEQ-IGFEDE  319 (320)
T ss_pred             HHHHH-cCCccC
Confidence            99975 999854

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK01346 hypothetical protein; Provisional

Probab=97.78  E-value=8.8e-05  Score=83.67  Aligned_cols=79  Identities=16%  Similarity=0.130  Sum_probs=65.0

Q ss_pred             EEEeeCCeEEEEEEEEEe------CC--eeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHH
Q 002450          791 AILTVNSSVVSAGILRVF------GQ--EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWT  862 (920)
Q Consensus       791 ~VLe~~~~vVsaAslrI~------G~--~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt  862 (920)
                      ++...+|++||.+.+..+      |.  ..+.|-.|+|.|+|||||+|++||..+++.++..|+..++|.+..  ..+|.
T Consensus        50 ~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~--~~~Y~  127 (411)
T PRK01346         50 LGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE--GGIYG  127 (411)
T ss_pred             EEEEECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc--hhhHh
Confidence            444678999998887532      32  578899999999999999999999999999999999888887654  46787


Q ss_pred             hccCcEEcCh
Q 002450          863 DKFGFKKIDP  872 (920)
Q Consensus       863 ~kFGF~~i~~  872 (920)
                      + |||.....
T Consensus       128 r-~Gf~~~~~  136 (411)
T PRK01346        128 R-FGYGPATY  136 (411)
T ss_pred             h-CCCeeccc
Confidence            5 99987654

>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.77  E-value=8.3e-06  Score=66.53  Aligned_cols=50  Identities=30%  Similarity=0.887  Sum_probs=37.6

Q ss_pred             ccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcchh
Q 002450          631 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       631 ~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~~  689 (920)
                      .|.+|++.+      .++.+|.||.|.+.||..|+.+...  ....+.+.|+| +.|..
T Consensus         1 ~C~vC~~~~------~~~~~i~C~~C~~~~H~~C~~~~~~--~~~~~~~~w~C-~~C~~   50 (51)
T PF00628_consen    1 YCPVCGQSD------DDGDMIQCDSCNRWYHQECVGPPEK--AEEIPSGDWYC-PNCRP   50 (51)
T ss_dssp             EBTTTTSSC------TTSSEEEBSTTSCEEETTTSTSSHS--HHSHHSSSBSS-HHHHH
T ss_pred             eCcCCCCcC------CCCCeEEcCCCChhhCcccCCCChh--hccCCCCcEEC-cCCcC
Confidence            388898832      4689999999999999999998421  12344559999 78863

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the PHD (homeodomain) zinc finger domain [,], which is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in chromatin-mediated transcriptional regulation. The PHD finger motif is reminiscent of, but distinct from the C3HC4 type RING finger. The function of this domain is not yet known but in analogy with the LIM domain it could be involved in protein-protein interaction and be important for the assembly or activity of multicomponent complexes involved in transcriptional activation or repression. Alternatively, the interactions could be intra-molecular and be important in maintaining the structural integrity of the protein. In similarity to the RING finger and the LIM domain, the PHD finger is thought to bind two zinc ions. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0005515 protein binding; PDB: 3ZVY_A 2LGG_A 3SOW_A 3SOU_B 3ASL_A 3ASK_A 3ZVZ_B 3T6R_A 2LGK_A 3SOX_B ....

>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=97.73  E-value=9.5e-05  Score=73.12  Aligned_cols=83  Identities=17%  Similarity=0.248  Sum_probs=71.9

Q ss_pred             eEEEEEee--CCeEEEEEEEEEe-----CC-eeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHH
Q 002450          788 MYCAILTV--NSSVVSAGILRVF-----GQ-EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAES  859 (920)
Q Consensus       788 fY~~VLe~--~~~vVsaAslrI~-----G~-~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~  859 (920)
                      +|.+|++.  .++||++|+|-|-     |- .-..|-=|+|.++|||||+|+.|+..+-.+..+||+=++.|.-.++.++
T Consensus        53 Y~i~Vied~~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~  132 (150)
T KOG3396|consen   53 YYIVVIEDKESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVK  132 (150)
T ss_pred             EEEEEEEeCCcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhh
Confidence            68888885  4899999999773     22 3345666899999999999999999999999999999999999999999


Q ss_pred             HHHhccCcEEcC
Q 002450          860 IWTDKFGFKKID  871 (920)
Q Consensus       860 ~Wt~kFGF~~i~  871 (920)
                      ||.+ |||+...
T Consensus       133 FYeK-cG~s~~~  143 (150)
T KOG3396|consen  133 FYEK-CGYSNAG  143 (150)
T ss_pred             HHHH-cCccccc
Confidence            9985 9999765

>KOG0383 consensus Predicted helicase [General function prediction only]

Probab=97.73  E-value=1.5e-05  Score=95.79  Aligned_cols=89  Identities=31%  Similarity=0.661  Sum_probs=65.9

Q ss_pred             Ccchhcccccccc--cCCCCCCCccCccchhhhhhccccccchhhhhccccCCCChhhHHhhhhhhhhcccccccccccc
Q 002450          557 SPSQFEAHAECAS--LSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLL  634 (920)
Q Consensus       557 cPS~FEaHa~CL~--LesIPsGdW~Cp~C~~~f~~ek~~~~n~Na~aag~i~gvD~~e~i~~RC~R~vk~~e~e~~~C~v  634 (920)
                      ||..+  |..|+.  +..-|+++|.||.|....-          ++.     ..|..            -.+.+.+.|.+
T Consensus         2 ~~r~~--~~~~~~p~~~~~~~~~~k~~~~e~~~~----------~~~-----~~~~~------------~~~~~~e~c~i   52 (696)
T KOG0383|consen    2 CPRAY--HRVCLDPKLKEEPEMDPKCPGCESSSA----------QVE-----AKDDD------------WDDAEQEACRI   52 (696)
T ss_pred             CCccc--CcCCCCcccccCCcCCccCcchhhccc----------ccc-----cccCC------------cchhhhhhhhh
Confidence            67888  999997  4456799999999963211          111     11110            01334578999


Q ss_pred             ccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcch
Q 002450          635 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS  688 (920)
Q Consensus       635 C~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~  688 (920)
                      |++         .++++.||.|+..||.+|+.+    ++...|.++|.| +.|.
T Consensus        53 c~~---------~g~~l~c~tC~~s~h~~cl~~----pl~~~p~~~~~c-~Rc~   92 (696)
T KOG0383|consen   53 CAD---------GGELLWCDTCPASFHASCLGP----PLTPQPNGEFIC-PRCF   92 (696)
T ss_pred             hcC---------CCcEEEeccccHHHHHHccCC----CCCcCCccceee-eeec
Confidence            986         579999999999999999998    788899999999 6883

>PRK10514 putative acetyltransferase; Provisional

Probab=97.71  E-value=0.00017  Score=68.74  Aligned_cols=73  Identities=16%  Similarity=0.114  Sum_probs=56.3

Q ss_pred             eeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEcChH
Q 002450          794 TVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPE  873 (920)
Q Consensus       794 e~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~~  873 (920)
                      +.++++||.+.+.-     .++-.+++.++|||||+|++|++.+++.+..  +...+...-..+..+|.+ +||+..+..
T Consensus        56 ~~~~~~iG~~~~~~-----~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~~--i~~~v~~~N~~a~~~yek-~Gf~~~~~~  127 (145)
T PRK10514         56 DERDQPVGFMLLSG-----GHMEALFVDPDVRGCGVGRMLVEHALSLHPE--LTTDVNEQNEQAVGFYKK-MGFKVTGRS  127 (145)
T ss_pred             ecCCcEEEEEEEec-----CcEeEEEECHHhccCCHHHHHHHHHHHhccc--cEEEeecCCHHHHHHHHH-CCCEEeccc
Confidence            56789999887642     3455799999999999999999999997643  334444555678999974 999998764


Q ss_pred             H
Q 002450          874 L  874 (920)
Q Consensus       874 e  874 (920)
                      .
T Consensus       128 ~  128 (145)
T PRK10514        128 E  128 (145)
T ss_pred             c
Confidence            4

>PRK10562 putative acetyltransferase; Provisional

Probab=97.69  E-value=0.00017  Score=69.46  Aligned_cols=75  Identities=11%  Similarity=0.121  Sum_probs=56.9

Q ss_pred             EEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEcC
Q 002450          792 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKID  871 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~  871 (920)
                      ++..+|++||.+.+...    ..+-.++|.++|||+|+|+.||..+++.+..+.+  .+...-+.+..+|.+ +||+.++
T Consensus        52 v~~~~~~~iG~~~~~~~----~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~--~v~~~N~~s~~~y~k-~Gf~~~~  124 (145)
T PRK10562         52 VWEEDGKLLGFVSVLEG----RFVGALFVAPKAVRRGIGKALMQHVQQRYPHLSL--EVYQKNQRAVNFYHA-QGFRIVD  124 (145)
T ss_pred             EEEECCEEEEEEEEeec----cEEEEEEECHHHcCCCHHHHHHHHHHhhCCeEEE--EEEcCChHHHHHHHH-CCCEEcc
Confidence            44667899999887432    3566799999999999999999999997654432  233445567889985 9999987


Q ss_pred             hH
Q 002450          872 PE  873 (920)
Q Consensus       872 ~~  873 (920)
                      ..
T Consensus       125 ~~  126 (145)
T PRK10562        125 SA  126 (145)
T ss_pred             cc
Confidence            64

>smart00249 PHD PHD zinc finger

Probab=97.67  E-value=4.2e-05  Score=59.60  Aligned_cols=47  Identities=38%  Similarity=0.936  Sum_probs=36.5

Q ss_pred             ccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcc
Q 002450          631 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDC  687 (920)
Q Consensus       631 ~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C  687 (920)
                      .|.+|++..      +++.++.|++|++.||..|+.....   ...+...|+| +.|
T Consensus         1 ~C~~C~~~~------~~~~~i~C~~C~~~~H~~C~~~~~~---~~~~~~~~~C-~~C   47 (47)
T smart00249        1 YCSVCGKPD------DGGELLQCDGCDRWYHQTCLGPPLL---EEEPDGKWYC-PKC   47 (47)
T ss_pred             CcccCCCcC------CCCCEEECCCCCchhhhhhCCCccc---CCCCCCCEEC-cCC
Confidence            378898743      4678999999999999999987321   2567789999 555

The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in epigenetics and chromatin-mediated transcriptional regulation. The PHD finger binds two zinc ions using the so-called 'cross-brace' motif and is thus structurally related to the

>PHA01807 hypothetical protein

Probab=97.66  E-value=0.00012  Score=73.55  Aligned_cols=75  Identities=7%  Similarity=-0.022  Sum_probs=58.6

Q ss_pred             EEEEEeeCCeEEEEEEEEEeCC----eeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhh---hHHHH
Q 002450          789 YCAILTVNSSVVSAGILRVFGQ----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---AESIW  861 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI~G~----~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e---a~~~W  861 (920)
                      +..+++.+|++||.+++.....    .+.+|--+.|.|+|||+|+|+.||+++++.++..|+..|++-...+   |..+|
T Consensus        54 ~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y  133 (153)
T PHA01807         54 TELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHY  133 (153)
T ss_pred             eEEEEEECCEEEEEEEEEcCCCcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHH
Confidence            3355577999999999865432    2333444689999999999999999999999999999998776554   56677


Q ss_pred             Hh
Q 002450          862 TD  863 (920)
Q Consensus       862 t~  863 (920)
                      .+
T Consensus       134 ~~  135 (153)
T PHA01807        134 RR  135 (153)
T ss_pred             Hh
Confidence            65

>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT)

Probab=97.65  E-value=0.00015  Score=65.79  Aligned_cols=74  Identities=18%  Similarity=0.225  Sum_probs=54.6

Q ss_pred             CeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEE-EcC-hhhhHHHHHhccCcEEcCh
Q 002450          797 SSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIV-LPA-AEEAESIWTDKFGFKKIDP  872 (920)
Q Consensus       797 ~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~Lv-lpA-~~ea~~~Wt~kFGF~~i~~  872 (920)
                      ++.+..++-.+.... ++|-.+.|.|+|||+|+|+.|+.++.+.+..-|..-+. +.. -..+..+|.+ +||+.+.+
T Consensus         7 ~~~~~l~~~~~~~~~-g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~~l~v~~~N~~s~~ly~k-lGf~~~~~   82 (86)
T PF08445_consen    7 GELVALVAWIIRSDD-GEIGGVYTLPEHRRRGLGSALVAALARELLERGKTPFLYVDADNEASIRLYEK-LGFREIEE   82 (86)
T ss_dssp             TCCEEEEEEEEESCT-CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEEEEEEETT-HHHHHHHHH-CT-EEEEE
T ss_pred             CCccceeeEeeeCCC-cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH-cCCEEEEE
Confidence            355566666666544 99999999999999999999999999998888876533 333 3346788875 99998754

This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.

>PRK15130 spermidine N1-acetyltransferase; Provisional

Probab=97.62  E-value=0.00031  Score=70.16  Aligned_cols=81  Identities=16%  Similarity=0.127  Sum_probs=64.7

Q ss_pred             EEEEeeCCeEEEEEEEEEeC--CeeeEeeeeeeccCccCCChhHHHHHHHHHHhh-hcCccEEEEcChh---hhHHHHHh
Q 002450          790 CAILTVNSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLLS-FLRVKSIVLPAAE---EAESIWTD  863 (920)
Q Consensus       790 ~~VLe~~~~vVsaAslrI~G--~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~-~LgVe~LvlpA~~---ea~~~Wt~  863 (920)
                      ..+++.+|++||.+.+....  ...+|+- +++.++|||+|+|+.|+..+.+.+. .+|+.+|++-...   .+..+|.+
T Consensus        59 ~~~i~~~g~~iG~~~~~~~~~~~~~~~~~-~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek  137 (186)
T PRK15130         59 RFVVECDGEKAGLVELVEINHVHRRAEFQ-IIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRK  137 (186)
T ss_pred             EEEEEECCEEEEEEEEEeecCCCCeEEEE-EEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHH
Confidence            34556789999999886543  3467774 8999999999999999999998765 6999999886443   57888875


Q ss_pred             ccCcEEcCh
Q 002450          864 KFGFKKIDP  872 (920)
Q Consensus       864 kFGF~~i~~  872 (920)
                       +||+.+..
T Consensus       138 -~GF~~~~~  145 (186)
T PRK15130        138 -LGFEVEGE  145 (186)
T ss_pred             -CCCEEEEE
Confidence             99998755

>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A

Probab=97.60  E-value=0.00041  Score=67.01  Aligned_cols=88  Identities=16%  Similarity=0.121  Sum_probs=66.8

Q ss_pred             CceEEEEEeeCCeEEEEEEEEE------eCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhc-CccEEEEcChhh--
Q 002450          786 GGMYCAILTVNSSVVSAGILRV------FGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFL-RVKSIVLPAAEE--  856 (920)
Q Consensus       786 ~GfY~~VLe~~~~vVsaAslrI------~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~L-gVe~LvlpA~~e--  856 (920)
                      .+++.+|...+|++||.+.+.-      .......+-.+++.++|||||+|+.++.++.+.+..- ++++|++...++  
T Consensus        46 ~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~  125 (152)
T PF13523_consen   46 PGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNT  125 (152)
T ss_dssp             TTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-H
T ss_pred             CCceEEEEEECCEEEEEEEEecccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCH
Confidence            4567778899999999887742      1335667889999999999999999999998887654 899999987764  


Q ss_pred             -hHHHHHhccCcEEcChHH
Q 002450          857 -AESIWTDKFGFKKIDPEL  874 (920)
Q Consensus       857 -a~~~Wt~kFGF~~i~~~e  874 (920)
                       +...++ |+||+.+..-+
T Consensus       126 ~~~~~~~-k~GF~~~g~~~  143 (152)
T PF13523_consen  126 RAIRLYE-KAGFRKVGEFE  143 (152)
T ss_dssp             HHHHHHH-HTT-EEEEEEE
T ss_pred             HHHHHHH-HcCCEEeeEEE
Confidence             567776 59999876543

>KOG4299 consensus PHD Zn-finger protein [General function prediction only]

Probab=97.54  E-value=2.8e-05  Score=91.37  Aligned_cols=50  Identities=38%  Similarity=1.015  Sum_probs=41.4

Q ss_pred             cccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcch
Q 002450          630 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS  688 (920)
Q Consensus       630 ~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~  688 (920)
                      ..|..|.+.+    .|  ..+|+||.|++.||+.||+|. + ..+.+|.|.||| +.|.
T Consensus       254 ~fCsaCn~~~----~F--~~~i~CD~Cp~sFH~~CLePP-l-~~eniP~g~W~C-~ec~  303 (613)
T KOG4299|consen  254 DFCSACNGSG----LF--NDIICCDGCPRSFHQTCLEPP-L-EPENIPPGSWFC-PECK  303 (613)
T ss_pred             HHHHHhCCcc----cc--ccceeecCCchHHHHhhcCCC-C-CcccCCCCcccc-CCCe
Confidence            4899998853    24  578999999999999999992 1 257899999999 8995

>COG3393 Predicted acetyltransferase [General function prediction only]

Probab=97.51  E-value=0.00029  Score=76.25  Aligned_cols=83  Identities=20%  Similarity=0.260  Sum_probs=66.7

Q ss_pred             EEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhc-CccEEEEcChh-hhHHHHHhccC
Q 002450          789 YCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFL-RVKSIVLPAAE-EAESIWTDKFG  866 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~L-gVe~LvlpA~~-ea~~~Wt~kFG  866 (920)
                      -+..++.+|+||+.|...-.+...|+|-.|.|.|+|||+||..+|+.++-..|-.- ...-|+..++. .|-.+|.+ .|
T Consensus       178 ~~~f~~~d~~iVa~A~t~a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~r-iG  256 (268)
T COG3393         178 RTYFLEGDGKIVAKAETAAENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQR-IG  256 (268)
T ss_pred             eEEEEccCCcEEEeeeccccCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHH-hC
Confidence            34444666799999999999999999999999999999999999999986655444 45556665444 46888985 99


Q ss_pred             cEEcCh
Q 002450          867 FKKIDP  872 (920)
Q Consensus       867 F~~i~~  872 (920)
                      |+.+++
T Consensus       257 F~~~g~  262 (268)
T COG3393         257 FREIGE  262 (268)
T ss_pred             Ceecce
Confidence            998763

>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase

Probab=97.48  E-value=0.00082  Score=64.50  Aligned_cols=79  Identities=13%  Similarity=0.120  Sum_probs=62.9

Q ss_pred             EeeCCeEEEEEEEEEeC--CeeeEeeeeeeccCccCCChhHHHHHHHHHHhh-hcCccEEEEcC---hhhhHHHHHhccC
Q 002450          793 LTVNSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLLS-FLRVKSIVLPA---AEEAESIWTDKFG  866 (920)
Q Consensus       793 Le~~~~vVsaAslrI~G--~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~-~LgVe~LvlpA---~~ea~~~Wt~kFG  866 (920)
                      +..+|++||.+.+....  ...+++-+. +.+.+| +|+|+.++.++++.+. .+|+.+|++..   -..+..++.+ +|
T Consensus        56 ~~~~g~~vG~~~~~~~~~~~~~~~~g~~-~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k-~G  132 (156)
T TIGR03585        56 VCQESRPIGVISFTDINLVHKSAFWGIY-ANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEK-FG  132 (156)
T ss_pred             EEECCEEEEEEEEEecChhhCeEEEEEE-eChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHH-cC
Confidence            36789999999997655  356777655 889999 9999999999999976 58999998754   3456778875 99


Q ss_pred             cEEcChHH
Q 002450          867 FKKIDPEL  874 (920)
Q Consensus       867 F~~i~~~e  874 (920)
                      |+.++...
T Consensus       133 f~~~g~~~  140 (156)
T TIGR03585       133 FEREGVFR  140 (156)
T ss_pred             CeEeeeeh
Confidence            99877543

Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.

>COG2153 ElaA Predicted acyltransferase [General function prediction only]

Probab=97.46  E-value=0.00035  Score=69.92  Aligned_cols=81  Identities=25%  Similarity=0.270  Sum_probs=66.7

Q ss_pred             eeCCeEEEEEEEEEeCCeeeE--eeeeeeccCccCCChhHHHHHHHHHHhhhcC-ccEEEEcChhhhHHHHHhccCcEEc
Q 002450          794 TVNSSVVSAGILRVFGQEVAE--LPLVATSKINHGKGYFQLLFACIEKLLSFLR-VKSIVLPAAEEAESIWTDKFGFKKI  870 (920)
Q Consensus       794 e~~~~vVsaAslrI~G~~vAE--lplvAT~~~yqgqG~gr~Lv~~IE~~L~~Lg-Ve~LvlpA~~ea~~~Wt~kFGF~~i  870 (920)
                      ..+|++|+.|.|---+....+  |=-|+|.+++||+|+|+.||....+.+.... =+.+.+.|-.-++.||.+ |||.++
T Consensus        56 ~~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~-~GFv~~  134 (155)
T COG2153          56 TPDGELVAYARLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYAS-FGFVRV  134 (155)
T ss_pred             cCCCeEEEEEecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHHHH-hCcEEc
Confidence            448999998887655665555  7789999999999999999987777765555 566899998899999986 999999


Q ss_pred             ChHHH
Q 002450          871 DPELL  875 (920)
Q Consensus       871 ~~~el  875 (920)
                      +++-+
T Consensus       135 ~e~yl  139 (155)
T COG2153         135 GEEYL  139 (155)
T ss_pred             Cchhh
Confidence            98764

>KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only]

Probab=97.44  E-value=5.8e-05  Score=89.03  Aligned_cols=82  Identities=29%  Similarity=0.829  Sum_probs=62.4

Q ss_pred             CcccCCCCCccCcchhccccccccc--C-CCCCCCccCccchhhhhhccccccchhhhhccccCCCChhhHHhhhhhhhh
Q 002450          546 GIICHCCNSEVSPSQFEAHAECASL--S-SIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIV  622 (920)
Q Consensus       546 GI~CdCCn~evcPS~FEaHa~CL~L--e-sIPsGdW~Cp~C~~~f~~ek~~~~n~Na~aag~i~gvD~~e~i~~RC~R~v  622 (920)
                      ..-|.+|.+-       +|-+|+.+  . .+-.+-|.||.|+                                      
T Consensus        35 m~ac~~c~~~-------yH~~cvt~~~~~~~l~~gWrC~~cr--------------------------------------   69 (694)
T KOG4443|consen   35 LLACSDCGQK-------YHPYCVTSWAQHAVLSGGWRCPSCR--------------------------------------   69 (694)
T ss_pred             chhhhhhccc-------CCcchhhHHHhHHHhcCCcccCCce--------------------------------------
Confidence            4569999763       39999873  1 2234559999996                                      


Q ss_pred             ccccccccccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcchhHH
Q 002450          623 KNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRIN  691 (920)
Q Consensus       623 k~~e~e~~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~~I~  691 (920)
                              .|..|+..      -++...++|+.|+-.||.+|..|    +++.+|.|.|+| +.|...+
T Consensus        70 --------vCe~c~~~------gD~~kf~~Ck~cDvsyh~yc~~P----~~~~v~sg~~~c-kk~~~c~  119 (694)
T KOG4443|consen   70 --------VCEACGTT------GDPKKFLLCKRCDVSYHCYCQKP----PNDKVPSGPWLC-KKCTRCR  119 (694)
T ss_pred             --------eeeecccc------CCcccccccccccccccccccCC----ccccccCccccc-HHHHhhh
Confidence                    37777631      14678999999999999999999    789999999999 6665544

>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A

Probab=97.44  E-value=0.00083  Score=63.00  Aligned_cols=71  Identities=17%  Similarity=0.200  Sum_probs=57.2

Q ss_pred             CCeEEEEEEEEEe--CCeeeEeeeeeeccCccCCChhHHHHHHHHHHh-hhcCccEEEEcChhh---hHHHHHhccCcE
Q 002450          796 NSSVVSAGILRVF--GQEVAELPLVATSKINHGKGYFQLLFACIEKLL-SFLRVKSIVLPAAEE---AESIWTDKFGFK  868 (920)
Q Consensus       796 ~~~vVsaAslrI~--G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L-~~LgVe~LvlpA~~e---a~~~Wt~kFGF~  868 (920)
                      ++++||...++..  ....|||- +.+.++|||+|+|+.++..+.+.+ ..+|+.+|.+...++   +..+.. |.||+
T Consensus        66 ~~~~iG~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~-k~GF~  142 (142)
T PF13302_consen   66 DGEIIGFIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLE-KLGFE  142 (142)
T ss_dssp             TTEEEEEEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHH-HTT-E
T ss_pred             CCceEEEeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHH-HcCCC
Confidence            4589999999543  45899999 668889999999999999999998 799999998886664   344554 59995

...

>KOG0954 consensus PHD finger protein [General function prediction only]

Probab=97.41  E-value=4.2e-05  Score=90.83  Aligned_cols=139  Identities=24%  Similarity=0.406  Sum_probs=86.1

Q ss_pred             ceecCCCcccCCCCCccCcchhcccccccccCCCCCCCccCccchhh------hhhc--cccccc--hhhhhcc------
Q 002450          540 GYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNM------FERK--RFLQHD--ANAVEAG------  603 (920)
Q Consensus       540 G~ktgdGI~CdCCn~evcPS~FEaHa~CL~LesIPsGdW~Cp~C~~~------f~~e--k~~~~n--~Na~aag------  603 (920)
                      +....+.|+||-||.-|       |+.|+++..+|+|.|.|..|.-.      +|+.  +.+..+  ...||+-      
T Consensus       282 ~e~~neMVfCd~Cn~cV-------HqaCyGIle~p~gpWlCr~Calg~~ppCvLCPkkGGamK~~~sgT~wAHvsCALwI  354 (893)
T KOG0954|consen  282 SEEANEMVFCDKCNICV-------HQACYGILEVPEGPWLCRTCALGIEPPCVLCPKKGGAMKPTKSGTKWAHVSCALWI  354 (893)
T ss_pred             ccccceeEEeccchhHH-------HHhhhceeecCCCCeeehhccccCCCCeeeccccCCcccccCCCCeeeEeeeeecc
Confidence            45566779999998754       99999999999999999999633      4432  444433  2346642      


Q ss_pred             ---ccCCCChhhHHhhhhhhhhccccccccccccccCCCCCCCCCCCCceeecC--CCCCccccccCccCcCCc---cCC
Q 002450          604 ---RVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCLKKHKMAD---LRE  675 (920)
Q Consensus       604 ---~i~gvD~~e~i~~RC~R~vk~~e~e~~~C~vC~~~df~~sgf~~~~LLlCD--QCer~YHv~CL~p~~~~~---L~e  675 (920)
                         -|+..+.+++|++-. ++.+..  =.-.|.+|+..        .|.-|.|.  .|.-+||+.|...+++.-   +.+
T Consensus       355 PEVsie~~ekmePItkfs-~IpesR--wslvC~LCk~k--------~GACIqCs~k~C~t~fHv~CA~~aG~~~~~~~~~  423 (893)
T KOG0954|consen  355 PEVSIECPEKMEPITKFS-HIPESR--WSLVCNLCKVK--------SGACIQCSNKTCRTAFHVTCAFEAGLEMKTILKE  423 (893)
T ss_pred             ceeeccCHhhcCcccccC-CCcHHH--HHHHHHHhccc--------CcceEEecccchhhhccchhhhhcCCeeeeeecc
Confidence               244455556665311 000000  01369999762        34666666  799999999999987631   112


Q ss_pred             CC--CcceeecCcchhHHHHHHHhhh
Q 002450          676 LP--KGKWFCCMDCSRINSVLQNLLV  699 (920)
Q Consensus       676 vP--~g~WFC~~~C~~I~~~LqkLl~  699 (920)
                      ..  ...-|| ..|..+.+  .+.++
T Consensus       424 ~D~v~~~s~c-~khs~~~~--~~s~g  446 (893)
T KOG0954|consen  424 NDEVKFKSYC-SKHSDHRE--GKSLG  446 (893)
T ss_pred             CCchhheeec-cccccccc--ccccc
Confidence            21  124688 67776654  34444

>TIGR01211 ELP3 histone acetyltransferase, ELP3 family

Probab=97.40  E-value=0.00041  Score=81.85  Aligned_cols=77  Identities=16%  Similarity=0.200  Sum_probs=63.3

Q ss_pred             eCCeEEEEEEEEEeCCeee-----------Eeeeeee--------ccCccCCChhHHHHHHHHHHhhhcCccEEEEcChh
Q 002450          795 VNSSVVSAGILRVFGQEVA-----------ELPLVAT--------SKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE  855 (920)
Q Consensus       795 ~~~~vVsaAslrI~G~~vA-----------ElplvAT--------~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~  855 (920)
                      .++.+||-..+|....+..           |+-..++        .++|||||+|+.||.++|+.++..|++.|++.+..
T Consensus       421 ~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~s~~  500 (522)
T TIGR01211       421 KNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGSEKILVISGI  500 (522)
T ss_pred             CCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEeeCc
Confidence            4568888888887654322           5555544        58899999999999999999999999999999888


Q ss_pred             hhHHHHHhccCcEEcCh
Q 002450          856 EAESIWTDKFGFKKIDP  872 (920)
Q Consensus       856 ea~~~Wt~kFGF~~i~~  872 (920)
                      .+..||.+ +||...++
T Consensus       501 ~A~~FY~k-lGf~~~g~  516 (522)
T TIGR01211       501 GVREYYRK-LGYELDGP  516 (522)
T ss_pred             hHHHHHHH-CCCEEEcc
Confidence            89999985 99997654

The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.

>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B

Probab=97.37  E-value=0.001  Score=69.61  Aligned_cols=92  Identities=15%  Similarity=0.108  Sum_probs=64.5

Q ss_pred             ceeCceEEEEEeeCC--eEEEEEEEEEeC-------------------------------------CeeeEeeeeeeccC
Q 002450          783 QEFGGMYCAILTVNS--SVVSAGILRVFG-------------------------------------QEVAELPLVATSKI  823 (920)
Q Consensus       783 ~~f~GfY~~VLe~~~--~vVsaAslrI~G-------------------------------------~~vAElplvAT~~~  823 (920)
                      +|-.+....+|..++  +||+|+-+-.-|                                     -.-++|--|||+|+
T Consensus        22 lDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvRIAvhP~  101 (196)
T PF13718_consen   22 LDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVRIAVHPD  101 (196)
T ss_dssp             HH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEEEEE-CC
T ss_pred             hcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEEEEEChh
Confidence            355667778888888  999999886665                                     24567788999999


Q ss_pred             ccCCChhHHHHHHHHHHh-------------------------hhcCccEEEEc--ChhhhHHHHHhccCcEEcChHHH
Q 002450          824 NHGKGYFQLLFACIEKLL-------------------------SFLRVKSIVLP--AAEEAESIWTDKFGFKKIDPELL  875 (920)
Q Consensus       824 yqgqG~gr~Lv~~IE~~L-------------------------~~LgVe~Lvlp--A~~ea~~~Wt~kFGF~~i~~~el  875 (920)
                      +||+|||+.|+..+++.+                         +.-+|..|=..  +.+++..||.+ .||.++--.+.
T Consensus       102 ~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k-~gf~pv~l~~~  179 (196)
T PF13718_consen  102 LQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQK-NGFVPVYLGQT  179 (196)
T ss_dssp             C-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHC-TT-EEEEE-SS
T ss_pred             hhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHH-CCcEEEEEecC
Confidence            999999999999999999                         46677776554  66889999996 99998865543

>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional

Probab=97.30  E-value=0.0012  Score=66.57  Aligned_cols=83  Identities=8%  Similarity=0.137  Sum_probs=63.7

Q ss_pred             eEEEEEeeCCeEEEEEEEEEeCC---eeeEeeeeeeccCccCCChhHHHHHHHHHHhhh-cCccEEEEcChhh---hHHH
Q 002450          788 MYCAILTVNSSVVSAGILRVFGQ---EVAELPLVATSKINHGKGYFQLLFACIEKLLSF-LRVKSIVLPAAEE---AESI  860 (920)
Q Consensus       788 fY~~VLe~~~~vVsaAslrI~G~---~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~-LgVe~LvlpA~~e---a~~~  860 (920)
                      .|.+++..++++||.+.+.....   ..+||= +.+.++|||||+|+.++.++.+.+.. +|+.+|++.+.+.   +..+
T Consensus        77 ~~~i~~~~~~~~iG~i~l~~~~~~~~~~~eig-~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l  155 (194)
T PRK10809         77 YFALLDPDEKEIIGVANFSNVVRGSFHACYLG-YSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDL  155 (194)
T ss_pred             EEEEEECCCCeEEEEEEEEeecCCCeeeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHH
Confidence            45554455789999999875532   446654 56799999999999999999999865 8999999887653   5666


Q ss_pred             HHhccCcEEcCh
Q 002450          861 WTDKFGFKKIDP  872 (920)
Q Consensus       861 Wt~kFGF~~i~~  872 (920)
                      +. |+||+..+.
T Consensus       156 ~e-k~Gf~~~g~  166 (194)
T PRK10809        156 LA-RLGFEKEGY  166 (194)
T ss_pred             HH-HCCCcEEee
Confidence            66 599997654

>COG3153 Predicted acetyltransferase [General function prediction only]

Probab=97.24  E-value=0.0025  Score=65.52  Aligned_cols=136  Identities=16%  Similarity=0.181  Sum_probs=91.7

Q ss_pred             HHHHHHHhhccCcccccCcCCCcchhhhccccCCCceeCceEEEEEeeCCeEEEEEEEE-E-eC-C--eeeEeeeeeecc
Q 002450          748 SQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILR-V-FG-Q--EVAELPLVATSK  822 (920)
Q Consensus       748 a~AL~I~~EcF~Pivd~rtgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~vVsaAslr-I-~G-~--~vAElplvAT~~  822 (920)
                      ....+|.++.|.|-    ...+++..+.-+   .+.++.=.+.+  +.+|+||+-..+- | +| .  .+-=|=-+||+|
T Consensus        15 ~~i~~~~~~aF~~~----~e~~~v~~lR~~---~~~~~~LslVA--~d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p   85 (171)
T COG3153          15 PAIEALTREAFGPG----REAKLVDKLREG---GRPDLTLSLVA--EDDGEVVGHILFSPVTVGGEELGWLGLAPLAVDP   85 (171)
T ss_pred             HHHHHHHHHHhhcc----hHHHHHHHHHhc---CCcccceeEEE--eeCCEEEEEEEEeEEEecCcccceEEEEeEEEch
Confidence            44556677888743    333444443332   22233333444  6779999866543 2 23 1  445566789999


Q ss_pred             CccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEcChHHHHHHHHhCcceeeecCcceeeecccCCc
Q 002450          823 INHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPACR  902 (920)
Q Consensus       823 ~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~~el~~~~~~~~~~~~F~Gts~LqK~L~~~~  902 (920)
                      +|||||+|++||...++.|+.+|...+++.-++.   .| .+|||.......+.      .+.. +|.+.+|.++|....
T Consensus        86 ~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGdp~---YY-~rfGF~~~~~~~l~------~p~~-~~~~~fl~~~L~~~~  154 (171)
T COG3153          86 EYQGQGIGSALVREGLEALRLAGASAVVVLGDPT---YY-SRFGFEPAAGAKLY------APGP-VPDERFLALELGDGA  154 (171)
T ss_pred             hhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCcc---cc-cccCcEEccccccc------cCCC-CCCceEEEEEccCCc
Confidence            9999999999999999999999999999987543   45 67999998876642      1333 677788888886643


Q ss_pred             c
Q 002450          903 I  903 (920)
Q Consensus       903 ~  903 (920)
                      .
T Consensus       155 l  155 (171)
T COG3153         155 L  155 (171)
T ss_pred             c
Confidence            3

>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional

Probab=97.18  E-value=0.0022  Score=63.70  Aligned_cols=78  Identities=8%  Similarity=0.084  Sum_probs=60.9

Q ss_pred             eeCCeEEEEEEEEEeCC--eeeEeeeeeeccCccCCChhHHHHHHHHHHhh-hcCccEEEEcChhh---hHHHHHhccCc
Q 002450          794 TVNSSVVSAGILRVFGQ--EVAELPLVATSKINHGKGYFQLLFACIEKLLS-FLRVKSIVLPAAEE---AESIWTDKFGF  867 (920)
Q Consensus       794 e~~~~vVsaAslrI~G~--~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~-~LgVe~LvlpA~~e---a~~~Wt~kFGF  867 (920)
                      ..+|++||.+.++....  +.+|+=. .+.++|||||+|+.++.++.+.+. .+|+++|.+.+.+.   +..++. |+||
T Consensus        73 ~~~~~~iG~~~l~~~~~~~~~~~ig~-~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~e-k~Gf  150 (179)
T PRK10151         73 FKEDELIGVLSFNRIEPLNKTAYIGY-WLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVAL-RNGF  150 (179)
T ss_pred             EECCEEEEEEEEEeeccCCCceEEEE-EEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHH-HCCC
Confidence            45889999999876532  5688865 689999999999999999888775 57899988765443   566665 5999


Q ss_pred             EEcChH
Q 002450          868 KKIDPE  873 (920)
Q Consensus       868 ~~i~~~  873 (920)
                      +..+..
T Consensus       151 ~~~g~~  156 (179)
T PRK10151        151 TLEGCL  156 (179)
T ss_pred             EEEeEe
Confidence            976654

>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.11  E-value=0.0029  Score=64.98  Aligned_cols=111  Identities=15%  Similarity=0.151  Sum_probs=80.7

Q ss_pred             eeCceEEEEEeeC-CeEEEEEEEEEeCC-----eeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcCh--h
Q 002450          784 EFGGMYCAILTVN-SSVVSAGILRVFGQ-----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA--E  855 (920)
Q Consensus       784 ~f~GfY~~VLe~~-~~vVsaAslrI~G~-----~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~--~  855 (920)
                      .=.|||.+|++.+ |+|++=|++.-|..     .++|. .|=++++.||+|+|++|+.++.+.+..+|+..++.--.  .
T Consensus        48 ~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~tve~-SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n  126 (169)
T COG1247          48 TRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRHTVEL-SIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDN  126 (169)
T ss_pred             ccCCceEEEEEcCCCeEEEEEEeeeccCccccceEEEE-EEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCC
Confidence            3356888888765 99999998877643     44443 45689999999999999999999999999988775422  2


Q ss_pred             hhHHHHHhccCcEEcChHHHHHHHHhCcceeeecCcceeeecccC
Q 002450          856 EAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPA  900 (920)
Q Consensus       856 ea~~~Wt~kFGF~~i~~~el~~~~~~~~~~~~F~Gts~LqK~L~~  900 (920)
                      .+.--..++|||...+....--     ...-.|-.+..||+.|..
T Consensus       127 ~aSi~lh~~~GF~~~G~~~~vg-----~k~g~wld~~~~~~~l~~  166 (169)
T COG1247         127 LASIALHEKLGFEEVGTFPEVG-----DKFGRWLDLVLMQLLLEE  166 (169)
T ss_pred             cHhHHHHHHCCCEEeccccccc-----cccceEEeeeeeehhhcc
Confidence            3444555679999988765331     133445666777777654

>KOG4299 consensus PHD Zn-finger protein [General function prediction only]

Probab=97.04  E-value=0.00033  Score=82.59  Aligned_cols=50  Identities=28%  Similarity=0.724  Sum_probs=36.1

Q ss_pred             eeeecceecCCCc--ccCCCCC----------ccCcchhccccccccc----CCCCCCCccCccchhh
Q 002450          535 QKLLEGYKNGLGI--ICHCCNS----------EVSPSQFEAHAECASL----SSIPQGDWYCKYCQNM  586 (920)
Q Consensus       535 q~lL~G~ktgdGI--~CdCCn~----------evcPS~FEaHa~CL~L----esIPsGdW~Cp~C~~~  586 (920)
                      +...++++.-..|  +|.-|++          +.||..|  |+.||+.    +.+|.|.|||+.|.+.
T Consensus       240 r~~~D~~~~~~~~~~fCsaCn~~~~F~~~i~CD~Cp~sF--H~~CLePPl~~eniP~g~W~C~ec~~k  305 (613)
T KOG4299|consen  240 RRERDKNISVEDIEDFCSACNGSGLFNDIICCDGCPRSF--HQTCLEPPLEPENIPPGSWFCPECKIK  305 (613)
T ss_pred             hhhhccccccCCHHHHHHHhCCccccccceeecCCchHH--HHhhcCCCCCcccCCCCccccCCCeee
Confidence            3345555555554  6665554          3479999  9999984    5899999999999643

>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length

Probab=96.74  E-value=0.0096  Score=58.71  Aligned_cols=81  Identities=17%  Similarity=0.257  Sum_probs=60.3

Q ss_pred             ceEEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcCh------hhhHHH
Q 002450          787 GMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA------EEAESI  860 (920)
Q Consensus       787 GfY~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~------~ea~~~  860 (920)
                      -+|++  +-|+.++||+.+.+.| +-++|--+.|++.-||.|.|..|++.+.+.+  -+|...++.+.      ..+...
T Consensus        39 ~l~aA--rFNdRlLgAv~v~~~~-~~~~L~~l~VRevTRrRGVG~yLlee~~rq~--p~i~~w~l~~~~~~~~~~~~~~~  113 (128)
T PF12568_consen   39 RLFAA--RFNDRLLGAVKVTISG-QQAELSDLCVREVTRRRGVGLYLLEEVLRQL--PDIKHWWLADEGVEPQDRAVMAA  113 (128)
T ss_dssp             EEEEE--EETTEEEEEEEEEEET-TEEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S--THHHHHH
T ss_pred             eEEEE--EechheeeeEEEEEcC-cceEEeeEEEeeccccccHHHHHHHHHHHHC--CCCcEEEEecCCCcccchHHHHH
Confidence            36877  8899999999999987 5899999999999999999999999999999  45556555543      245566


Q ss_pred             HHhccCcEEcCh
Q 002450          861 WTDKFGFKKIDP  872 (920)
Q Consensus       861 Wt~kFGF~~i~~  872 (920)
                      +...+||+..++
T Consensus       114 Fm~a~GF~~~~~  125 (128)
T PF12568_consen  114 FMQACGFSAQSD  125 (128)
T ss_dssp             HHHHHT-EE-SS
T ss_pred             HHHHcCccccCC
Confidence            677799987653

It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.

>cd04718 BAH_plant_2 BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function

Probab=96.69  E-value=0.00076  Score=67.72  Aligned_cols=26  Identities=42%  Similarity=1.106  Sum_probs=23.9

Q ss_pred             ccccccCccCcCCccCCCCCcceeecCcchh
Q 002450          659 EFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       659 ~YHv~CL~p~~~~~L~evP~g~WFC~~~C~~  689 (920)
                      +||+.||+|    ||+++|+|+|+| +.|..
T Consensus         1 g~H~~CL~P----pl~~~P~g~W~C-p~C~~   26 (148)
T cd04718           1 GFHLCCLRP----PLKEVPEGDWIC-PFCEV   26 (148)
T ss_pred             CcccccCCC----CCCCCCCCCcCC-CCCcC
Confidence            599999999    899999999999 89963

BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.

>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only]

Probab=96.43  E-value=0.0019  Score=80.92  Aligned_cols=51  Identities=27%  Similarity=0.782  Sum_probs=42.4

Q ss_pred             cccccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcchh
Q 002450          628 ELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       628 e~~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~~  689 (920)
                      +...|.||.+++-    +....+++||.|..++|+.|+.      ..-+|+|.|+| ..|..
T Consensus       218 ~D~~C~iC~~~~~----~n~n~ivfCD~Cnl~VHq~Cyg------i~~ipeg~WlC-r~Cl~  268 (1051)
T KOG0955|consen  218 EDAVCCICLDGEC----QNSNVIVFCDGCNLAVHQECYG------IPFIPEGQWLC-RRCLQ  268 (1051)
T ss_pred             CCccceeeccccc----CCCceEEEcCCCcchhhhhccC------CCCCCCCcEee-hhhcc
Confidence            4468999998763    3457899999999999999996      35789999999 88953

>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2

Probab=96.36  E-value=0.0067  Score=56.45  Aligned_cols=75  Identities=17%  Similarity=0.212  Sum_probs=57.3

Q ss_pred             EEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHH--HhccCcEE
Q 002450          792 ILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIW--TDKFGFKK  869 (920)
Q Consensus       792 VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~W--t~kFGF~~  869 (920)
                      ||--.|.+||=...    .+.+||+.-.|.|+|||||+.+.++....+.|..+|+.- ++..+++-+...  .+++||..
T Consensus         3 llgpeG~PVSW~lm----dqtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P~-Y~hv~~~N~~~~r~~~~lg~~~   77 (89)
T PF08444_consen    3 LLGPEGNPVSWSLM----DQTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFPF-YGHVDEDNEASQRLSKSLGFIF   77 (89)
T ss_pred             ccCCCCCEeEEEEe----cccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCCe-EeehHhccHHHHHHHHHCCCee
Confidence            34556788886654    477899999999999999999999999999999999974 344443333222  24599988


Q ss_pred             cC
Q 002450          870 ID  871 (920)
Q Consensus       870 i~  871 (920)
                      ++
T Consensus        78 ~p   79 (89)
T PF08444_consen   78 MP   79 (89)
T ss_pred             cC
Confidence            75

3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].

>KOG1245 consensus Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains) [Chromatin structure and dynamics]

Probab=96.33  E-value=0.00097  Score=86.13  Aligned_cols=60  Identities=32%  Similarity=0.733  Sum_probs=49.2

Q ss_pred             ccccccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcchhHHHHHHHh
Q 002450          627 AELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNL  697 (920)
Q Consensus       627 ~e~~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~~I~~~LqkL  697 (920)
                      .....|.+|+..      .+...+++||+|.++||..|++|    .+..+|.++||| +.|..-....+.+
T Consensus      1106 ~~~~~c~~cr~k------~~~~~m~lc~~c~~~~h~~C~rp----~~~~~~~~dW~C-~~c~~e~~~rr~~ 1165 (1404)
T KOG1245|consen 1106 AVNALCKVCRRK------KQDEKMLLCDECLSGFHLFCLRP----ALSSVPPGDWMC-PSCRKEHRARRQK 1165 (1404)
T ss_pred             cchhhhhhhhhc------ccchhhhhhHhhhhhHHHHhhhh----hhccCCcCCccC-Cccchhhhhhhhh
Confidence            344689999873      35678999999999999999999    788999999999 8998666544443

>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]

Probab=96.28  E-value=0.064  Score=54.60  Aligned_cols=125  Identities=17%  Similarity=0.143  Sum_probs=90.2

Q ss_pred             CHHHHHHHHHHHHHHhhccCcccccCcCCCcchhhhccccCCCceeCceEEEEEee-CCeEEEEEEEEEe-----CCeee
Q 002450          740 TPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTV-NSSVVSAGILRVF-----GQEVA  813 (920)
Q Consensus       740 ~~e~~s~La~AL~I~~EcF~Pivd~rtgrDLI~~mVyg~~~~r~~f~GfY~~VLe~-~~~vVsaAslrI~-----G~~vA  813 (920)
                      +.+.-.+|-.-|+.|+.+=+|.+.  |.-+|-.+-     |....|.=.+.+.++. ++++||-|.+..+     |.+.-
T Consensus        13 D~~~i~rLikela~Fek~~~~v~~--te~~l~~~~-----F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~k~~i   85 (163)
T KOG3216|consen   13 DCEDILRLIKELAEFEKLEDQVEA--TEENLARDG-----FIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLGKQGI   85 (163)
T ss_pred             cHHHHHHHHHHHHHHHHhccchhh--chhhhhhhh-----ccCCCccEEEEEEEecCCCceeEEeeeecccccccccceE
Confidence            344555666778888887777654  344444333     3334455556666665 7899999888764     33555


Q ss_pred             EeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEE---EEcChhhhHHHHHhccCcEEcCh
Q 002450          814 ELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSI---VLPAAEEAESIWTDKFGFKKIDP  872 (920)
Q Consensus       814 ElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~L---vlpA~~ea~~~Wt~kFGF~~i~~  872 (920)
                      =|-=+=++++|||+|+|+.|+..+-+.+..+|..++   |+.--.-|+.+|.+ .|++....
T Consensus        86 YleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k-~gaq~l~~  146 (163)
T KOG3216|consen   86 YLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEK-VGAQDLKE  146 (163)
T ss_pred             EEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHH-hCccccce
Confidence            566677999999999999999999999999998875   55555678999985 99987765

>COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]

Probab=96.22  E-value=0.0024  Score=68.81  Aligned_cols=49  Identities=43%  Similarity=1.164  Sum_probs=38.4

Q ss_pred             cccccccccccCCCCCCCCCCCCceeecC--CCCCc-cccccCccCcCCccCCCCCcceeecCcchh
Q 002450          626 EAELSGCLLCRGCDFSKSGFGPRTILLCD--QCERE-FHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       626 e~e~~~C~vC~~~df~~sgf~~~~LLlCD--QCer~-YHv~CL~p~~~~~L~evP~g~WFC~~~C~~  689 (920)
                      +++.-+|+ |++-.     |  +.|+-||  -|+++ ||..|+      .|++.|+|.||| ++|+.
T Consensus       218 e~e~lYCf-CqqvS-----y--GqMVaCDn~nCkrEWFH~~CV------GLk~pPKG~WYC-~eCk~  269 (271)
T COG5034         218 EGEELYCF-CQQVS-----Y--GQMVACDNANCKREWFHLECV------GLKEPPKGKWYC-PECKK  269 (271)
T ss_pred             cCceeEEE-ecccc-----c--ccceecCCCCCchhheecccc------ccCCCCCCcEeC-HHhHh
Confidence            33445674 87743     3  5899999  68876 899999      478999999999 89975

>KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics]

Probab=96.13  E-value=0.0023  Score=70.01  Aligned_cols=36  Identities=39%  Similarity=1.022  Sum_probs=31.4

Q ss_pred             CCceeecCC--CC-CccccccCccCcCCccCCCCCcceeecCcchh
Q 002450          647 PRTILLCDQ--CE-REFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       647 ~~~LLlCDQ--Ce-r~YHv~CL~p~~~~~L~evP~g~WFC~~~C~~  689 (920)
                      -+.++.||.  |+ ..||..|+      .|++-|.|.||| +.|..
T Consensus       229 yg~Mi~CDn~~C~~eWFH~~CV------GL~~~PkgkWyC-~~C~~  267 (274)
T KOG1973|consen  229 YGKMIGCDNPGCPIEWFHFTCV------GLKTKPKGKWYC-PRCKA  267 (274)
T ss_pred             cccccccCCCCCCcceEEEecc------ccccCCCCcccc-hhhhh
Confidence            368999998  99 88999999      478899999999 68864

>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]

Probab=96.05  E-value=0.019  Score=63.40  Aligned_cols=81  Identities=20%  Similarity=0.279  Sum_probs=72.2

Q ss_pred             eEEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCc
Q 002450          788 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGF  867 (920)
Q Consensus       788 fY~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF  867 (920)
                      .++++...+++||+++++  +|.   -|+-|||++.+||-|.--.|+.++..++-++|..+||+-+-++...++.. +||
T Consensus        37 ~~v~~~~~~~~iiacGsi--aGn---vikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk~-~GF  110 (352)
T COG3053          37 YFVAIYRDNEEIIACGSI--AGN---VIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAALFKQ-CGF  110 (352)
T ss_pred             EEEEEEcCCCcEEEeccc--ccc---eeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHHHHHh-CCc
Confidence            466666777999999995  564   38999999999999999999999999999999999999999999999986 999


Q ss_pred             EEcChHH
Q 002450          868 KKIDPEL  874 (920)
Q Consensus       868 ~~i~~~e  874 (920)
                      ..+...+
T Consensus       111 ~~i~~~~  117 (352)
T COG3053         111 SEIASAE  117 (352)
T ss_pred             eEeeccC
Confidence            9988755

>KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics]

Probab=96.00  E-value=0.003  Score=69.12  Aligned_cols=37  Identities=41%  Similarity=0.945  Sum_probs=31.0

Q ss_pred             cCCCcccCC--CCCccCcchhcccccccccCCCCCCCccCccchh
Q 002450          543 NGLGIICHC--CNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQN  585 (920)
Q Consensus       543 tgdGI~CdC--Cn~evcPS~FEaHa~CL~LesIPsGdW~Cp~C~~  585 (920)
                      -|+=|-||+  |..+    =|  |..|.+|..-|.|.||||.|..
T Consensus       229 yg~Mi~CDn~~C~~e----WF--H~~CVGL~~~PkgkWyC~~C~~  267 (274)
T KOG1973|consen  229 YGKMIGCDNPGCPIE----WF--HFTCVGLKTKPKGKWYCPRCKA  267 (274)
T ss_pred             cccccccCCCCCCcc----eE--EEeccccccCCCCcccchhhhh
Confidence            456688888  7533    48  9999999999999999999974

>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B

Probab=95.97  E-value=0.04  Score=60.38  Aligned_cols=79  Identities=16%  Similarity=0.053  Sum_probs=56.3

Q ss_pred             EEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcE
Q 002450          789 YCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFK  868 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~  868 (920)
                      ||+  ..+|+|||.|+-.......+||- |+|.++|||||+.+++..++......-|+--.|--+ ..+.----.|+||+
T Consensus       168 f~i--~~~~~iVs~~~s~~~~~~~~EI~-I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WDc~-N~~S~~lA~kLGf~  243 (265)
T PF12746_consen  168 FCI--LHDGEIVSGCSSYFVYENGIEID-IETHPEYRGKGLATAVAAAFILECLENGLYPSWDCH-NLASIALAEKLGFH  243 (265)
T ss_dssp             EEE--EETTEEEEEEEEEEEETTEEEEE-EEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-EES-SHHHHHHHHHCT--
T ss_pred             EEE--EECCEEEEEEEEEEEECCEEEEE-EEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCeeCC-CHHHHHHHHHcCCc
Confidence            454  56889999777666666788985 799999999999999999999999999988888654 32322333579998


Q ss_pred             EcC
Q 002450          869 KID  871 (920)
Q Consensus       869 ~i~  871 (920)
                      ...
T Consensus       244 ~~~  246 (265)
T PF12746_consen  244 FDF  246 (265)
T ss_dssp             EEE
T ss_pred             ccc
Confidence            653

>PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A

Probab=95.89  E-value=0.0016  Score=50.96  Aligned_cols=34  Identities=35%  Similarity=1.003  Sum_probs=19.2

Q ss_pred             CCCcccCCCCCccCcchhcccccccccCCCCCC-CccCccch
Q 002450          544 GLGIICHCCNSEVSPSQFEAHAECASLSSIPQG-DWYCKYCQ  584 (920)
Q Consensus       544 gdGI~CdCCn~evcPS~FEaHa~CL~LesIPsG-dW~Cp~C~  584 (920)
                      ...|.|+.|+..       +|+.|+++..+|.+ +|+|..|+
T Consensus         2 n~ll~C~~C~v~-------VH~~CYGv~~~~~~~~W~C~~C~   36 (36)
T PF13831_consen    2 NPLLFCDNCNVA-------VHQSCYGVSEVPDGDDWLCDRCE   36 (36)
T ss_dssp             CEEEE-SSS--E-------EEHHHHT-SS--SS-----HHH-
T ss_pred             CceEEeCCCCCc-------CChhhCCcccCCCCCcEECCcCC
Confidence            356889999763       39999999999998 89999984

>KOG3397 consensus Acetyltransferases [General function prediction only]

Probab=95.88  E-value=0.017  Score=59.60  Aligned_cols=78  Identities=19%  Similarity=0.282  Sum_probs=61.6

Q ss_pred             eCCeEEEEEEEE-EeCC-eeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEcCh
Q 002450          795 VNSSVVSAGILR-VFGQ-EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP  872 (920)
Q Consensus       795 ~~~~vVsaAslr-I~G~-~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~  872 (920)
                      .+++||+-+.|- |-.. +.--+-.|.|....||||+|++||+..|..++..|.+.+.|.++ +-..||++ +||..-++
T Consensus        64 ~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~-DQ~~FYe~-lGYe~c~P  141 (225)
T KOG3397|consen   64 ENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTD-DQCRFYES-LGYEKCDP  141 (225)
T ss_pred             cccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecc-cchhhhhh-hcccccCc
Confidence            346777655543 3333 44556788899999999999999999999999999999999875 45789987 99998776


Q ss_pred             HH
Q 002450          873 EL  874 (920)
Q Consensus       873 ~e  874 (920)
                      -+
T Consensus       142 i~  143 (225)
T KOG3397|consen  142 IV  143 (225)
T ss_pred             ee
Confidence            55

>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]

Probab=95.82  E-value=0.05  Score=52.65  Aligned_cols=89  Identities=19%  Similarity=0.207  Sum_probs=66.3

Q ss_pred             CceEEEEEeeCC--eEEEEEEEEEeC----CeeeEeeeeeeccCccCCChhHHHHHHHHHHhhh-cCccEEEEcChhhhH
Q 002450          786 GGMYCAILTVNS--SVVSAGILRVFG----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSF-LRVKSIVLPAAEEAE  858 (920)
Q Consensus       786 ~GfY~~VLe~~~--~vVsaAslrI~G----~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~-LgVe~LvlpA~~ea~  858 (920)
                      .+.|.+++..++  ++||.+.+..+.    .+.+|+=..- .+.|+|||++...+.++.+.+-. +++.+|++-..+.-+
T Consensus        64 ~~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~ig~~l-~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~  142 (187)
T COG1670          64 GGAFAIELKATGDGELIGVIGLSDIDRAANGDLAEIGYWL-DPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENE  142 (187)
T ss_pred             CceEEEEEEeCCCCeEEEEEEEEEeccccccceEEEEEEE-ChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCH
Confidence            345666656544  999999998654    4667766555 89999999999999998888655 999999988777654


Q ss_pred             HHHH--hccCcEEcChHHH
Q 002450          859 SIWT--DKFGFKKIDPELL  875 (920)
Q Consensus       859 ~~Wt--~kFGF~~i~~~el  875 (920)
                      .-+.  .|+||+..+....
T Consensus       143 ~S~rv~ek~Gf~~eg~~~~  161 (187)
T COG1670         143 ASIRVYEKLGFRLEGELRQ  161 (187)
T ss_pred             HHHHHHHHcCChhhhhhhh
Confidence            4444  5699997765443

>KOG0957 consensus PHD finger protein [General function prediction only]

Probab=95.80  E-value=0.0033  Score=72.67  Aligned_cols=47  Identities=34%  Similarity=0.946  Sum_probs=39.9

Q ss_pred             cccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCc----ceeecCcc
Q 002450          630 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKG----KWFCCMDC  687 (920)
Q Consensus       630 ~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g----~WFC~~~C  687 (920)
                      ..|.||++..      +-..++.||.|-..||++||.|    ||+.+|.-    -|-| ..|
T Consensus       545 ysCgiCkks~------dQHll~~CDtC~lhYHlGCL~P----PLTR~Pkk~kn~gWqC-sEC  595 (707)
T KOG0957|consen  545 YSCGICKKST------DQHLLTQCDTCHLHYHLGCLSP----PLTRLPKKNKNFGWQC-SEC  595 (707)
T ss_pred             eeeeeeccch------hhHHHhhcchhhceeeccccCC----ccccCcccccCcceee-ccc
Confidence            5899999842      3457789999999999999999    89998875    4999 699

>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]

Probab=95.72  E-value=0.013  Score=48.19  Aligned_cols=44  Identities=16%  Similarity=0.120  Sum_probs=38.0

Q ss_pred             eeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCc
Q 002450          818 VATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGF  867 (920)
Q Consensus       818 vAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF  867 (920)
                      ++|.++|||+|+|+.|+..+++.+...|+.     ....+..+|.. +||
T Consensus        87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~-----~~~~~~~~~~~-~~~  130 (156)
T COG0454          87 LYVLPEYRGKGIGSALLEAALEWARKRGIS-----LNRLALEVYEK-NGF  130 (156)
T ss_pred             EEecchhhccchHHHHHHHHHHHHHHcCce-----ehHHHHHHHHh-cCC
Confidence            999999999999999999999999998877     44456777765 888

>KOG0956 consensus PHD finger protein AF10 [General function prediction only]

Probab=95.64  E-value=0.0051  Score=73.33  Aligned_cols=49  Identities=31%  Similarity=0.987  Sum_probs=41.6

Q ss_pred             cccccccCCCCCCCCCCCCceeecC--CCCCccccccCccCcCCccCCCCCcceeecCcchh
Q 002450          630 SGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       630 ~~C~vC~~~df~~sgf~~~~LLlCD--QCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~~  689 (920)
                      ++|-||.+..    |..+..++.||  -|.-+.|+.|+.      +.++|.|.||| ..|..
T Consensus         6 GGCCVCSDEr----GWaeNPLVYCDG~nCsVAVHQaCYG------IvqVPtGpWfC-rKCes   56 (900)
T KOG0956|consen    6 GGCCVCSDER----GWAENPLVYCDGHNCSVAVHQACYG------IVQVPTGPWFC-RKCES   56 (900)
T ss_pred             cceeeecCcC----CCccCceeeecCCCceeeeehhcce------eEecCCCchhh-hhhhh
Confidence            6899997632    45588999999  699999999994      57899999999 89963

>cd04718 BAH_plant_2 BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function

Probab=95.58  E-value=0.0058  Score=61.54  Aligned_cols=23  Identities=39%  Similarity=1.135  Sum_probs=20.9

Q ss_pred             cccccc--cCCCCCCCccCccchhh
Q 002450          564 HAECAS--LSSIPQGDWYCKYCQNM  586 (920)
Q Consensus       564 Ha~CL~--LesIPsGdW~Cp~C~~~  586 (920)
                      |..||+  |..+|+|+|+||.|...
T Consensus         3 H~~CL~Ppl~~~P~g~W~Cp~C~~~   27 (148)
T cd04718           3 HLCCLRPPLKEVPEGDWICPFCEVE   27 (148)
T ss_pred             ccccCCCCCCCCCCCCcCCCCCcCC
Confidence            999998  67999999999999864

BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.

>KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only]

Probab=95.40  E-value=0.009  Score=69.44  Aligned_cols=126  Identities=22%  Similarity=0.379  Sum_probs=71.4

Q ss_pred             CCcccCCCCCccCcchhcccccccccCCCCCCCccCccchhh-hhhccccccchhhhhccccC------CCChhhHHhhh
Q 002450          545 LGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNM-FERKRFLQHDANAVEAGRVS------GVDSVEQITKR  617 (920)
Q Consensus       545 dGI~CdCCn~evcPS~FEaHa~CL~LesIPsGdW~Cp~C~~~-f~~ek~~~~n~Na~aag~i~------gvD~~e~i~~R  617 (920)
                      ....|+-|..     .+  |+.|--....-.+.|.+..|... +..++....      .|+.+      +....++   +
T Consensus        99 e~~~~~r~~~-----~~--~q~~~i~~~~~~~~~~~~~c~~~~~~~~g~a~K------~g~~a~~~l~y~~~~l~w---D  162 (464)
T KOG4323|consen   99 EKVICGRCKS-----GY--HQGCNIPRFPSLDIGESTECVFPIFSQEGGALK------KGRLARPSLPYPEASLDW---D  162 (464)
T ss_pred             hhhhhhhhcc-----Cc--ccccCccCcCcCCcccccccccccccccccccc------ccccccccccCccccccc---C
Confidence            3445777754     45  99997665555688999988642 332221110      11111      1111110   0


Q ss_pred             hhhhhccccccccccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcchhHHHHHHHh
Q 002450          618 CIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNL  697 (920)
Q Consensus       618 C~R~vk~~e~e~~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~~I~~~LqkL  697 (920)
                      -.     ...+ ..|.+|+....   +. ...|+.|+.|...||..|..+-...-+-.-|...||| ..|.+=.+.+..+
T Consensus       163 ~~-----~~~n-~qc~vC~~g~~---~~-~NrmlqC~~C~~~fHq~Chqp~i~~~l~~D~~~~w~C-~~C~~~~~~~~r~  231 (464)
T KOG4323|consen  163 SG-----HKVN-LQCSVCYCGGP---GA-GNRMLQCDKCRQWYHQACHQPLIKDELAGDPFYEWFC-DVCNRGPKKVPRL  231 (464)
T ss_pred             cc-----cccc-ceeeeeecCCc---Cc-cceeeeecccccHHHHHhccCCCCHhhccCccceEee-hhhccchhhcccc
Confidence            00     0112 24999986332   22 3489999999999999999984322222346789999 6887544444333

>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]

Probab=95.40  E-value=0.045  Score=57.31  Aligned_cols=83  Identities=22%  Similarity=0.289  Sum_probs=64.3

Q ss_pred             EEEEEeeCCeEEEEEEEEEe---CCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEc---ChhhhHHHHH
Q 002450          789 YCAILTVNSSVVSAGILRVF---GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP---AAEEAESIWT  862 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI~---G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~Lvlp---A~~ea~~~Wt  862 (920)
                      |....+..+++||-+++|+-   |-.++=.-=|-+.+.|||+|+|+.|++.+|.+....+.+.++|-   .-.-+.+||.
T Consensus        94 Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~  173 (202)
T KOG2488|consen   94 YICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYH  173 (202)
T ss_pred             EEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHH
Confidence            66666666699999999984   54455555566778899999999999999999988888866553   4445788997


Q ss_pred             hccCcEEcCh
Q 002450          863 DKFGFKKIDP  872 (920)
Q Consensus       863 ~kFGF~~i~~  872 (920)
                      + +||-+.+.
T Consensus       174 ~-~gf~~~~~  182 (202)
T KOG2488|consen  174 R-LGFVVDEE  182 (202)
T ss_pred             H-cCcccCCC
Confidence            6 99987654

>COG5141 PHD zinc finger-containing protein [General function prediction only]

Probab=95.35  E-value=0.0067  Score=70.13  Aligned_cols=47  Identities=32%  Similarity=0.830  Sum_probs=38.7

Q ss_pred             cccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcc
Q 002450          630 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDC  687 (920)
Q Consensus       630 ~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C  687 (920)
                      +.|.+|...+-+    +.+.+++||.|+-.-|..|+.      +..+|+|.|+| +.|
T Consensus       194 ~~C~~c~~t~~e----N~naiVfCdgC~i~VHq~CYG------I~f~peG~WlC-rkC  240 (669)
T COG5141         194 DICTKCTSTHNE----NSNAIVFCDGCEICVHQSCYG------IQFLPEGFWLC-RKC  240 (669)
T ss_pred             hhhHhccccccC----CcceEEEecCcchhhhhhccc------ceecCcchhhh-hhh
Confidence            568888775533    246899999999999999995      46789999999 788

>COG2388 Predicted acetyltransferase [General function prediction only]

Probab=95.04  E-value=0.083  Score=50.17  Aligned_cols=73  Identities=16%  Similarity=0.144  Sum_probs=60.4

Q ss_pred             CceEEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHH
Q 002450          786 GGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWT  862 (920)
Q Consensus       786 ~GfY~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt  862 (920)
                      +++|++  ..+|+.++.++..-.|.+.--|+=--|.+++||||+++.|+....+.++.-|.+  ++|.-+-+...|.
T Consensus        15 ~~~y~~--~~~G~~~~e~~y~~~~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~k--iiP~Csf~~a~~~   87 (99)
T COG2388          15 NGRYVL--TDEGEVIGEATYYDRGENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLK--IIPLCSFAVATYF   87 (99)
T ss_pred             ceEEEE--ecCCcEEEEEEEecCCCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCe--EcccchHHHHHHH
Confidence            567876  888999999999888989999999999999999999999999999999999863  5566553333343

>COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]

Probab=95.03  E-value=0.01  Score=64.18  Aligned_cols=53  Identities=32%  Similarity=0.777  Sum_probs=38.9

Q ss_pred             CCCCCCEEeEeeCCeeeecceecCCCcccCC--CCCccCcchhcccccccccCCCCCCCccCccchh
Q 002450          521 GLPDGTEVGYYACGQKLLEGYKNGLGIICHC--CNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQN  585 (920)
Q Consensus       521 gL~dGteV~Y~~~gq~lL~G~ktgdGI~CdC--Cn~evcPS~FEaHa~CL~LesIPsGdW~Cp~C~~  585 (920)
                      +..+|.+|..|-+-      .-.|+-|-||.  |..+    =|  |..|.+|...|.|.|||+.|..
T Consensus       215 d~se~e~lYCfCqq------vSyGqMVaCDn~nCkrE----WF--H~~CVGLk~pPKG~WYC~eCk~  269 (271)
T COG5034         215 DNSEGEELYCFCQQ------VSYGQMVACDNANCKRE----WF--HLECVGLKEPPKGKWYCPECKK  269 (271)
T ss_pred             ccccCceeEEEecc------cccccceecCCCCCchh----he--eccccccCCCCCCcEeCHHhHh
Confidence            34578888777431      12456677874  5444    37  9999999999999999999963

>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]

Probab=95.02  E-value=0.03  Score=68.75  Aligned_cols=59  Identities=15%  Similarity=0.113  Sum_probs=46.7

Q ss_pred             EeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEc--ChhhhHHHHHhccCcEEcChHH
Q 002450          814 ELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP--AAEEAESIWTDKFGFKKIDPEL  874 (920)
Q Consensus       814 ElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~Lvlp--A~~ea~~~Wt~kFGF~~i~~~e  874 (920)
                      .|--|||+|++|++|||++|+..+.+.++ .|+..|-..  +.+++..||.+ .||.++--..
T Consensus       533 RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~r-nGF~pVhls~  593 (758)
T COG1444         533 RIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLR-NGFVPVHLSP  593 (758)
T ss_pred             eEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHH-cCeEEEEecC
Confidence            34457999999999999999999999985 444444433  57889999996 9999886544

>PF15446 zf-PHD-like: PHD/FYVE-zinc-finger like domain

Probab=95.02  E-value=0.018  Score=59.01  Aligned_cols=22  Identities=23%  Similarity=0.603  Sum_probs=18.8

Q ss_pred             CCceeecCCCCCccccccCccC
Q 002450          647 PRTILLCDQCEREFHVGCLKKH  668 (920)
Q Consensus       647 ~~~LLlCDQCer~YHv~CL~p~  668 (920)
                      +..|.-|..|.++||+.-|.+.
T Consensus       121 ~nVLFRC~~C~RawH~~HLP~~  142 (175)
T PF15446_consen  121 DNVLFRCTSCHRAWHFEHLPPP  142 (175)
T ss_pred             hheEEecCCccceeehhhCCCC
Confidence            4567889999999999999774

>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A

Probab=94.99  E-value=0.11  Score=46.66  Aligned_cols=67  Identities=12%  Similarity=0.051  Sum_probs=51.8

Q ss_pred             EeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHh
Q 002450          793 LTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTD  863 (920)
Q Consensus       793 Le~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~  863 (920)
                      +..+|+.+|...++. +.+.-.|--.-|.+++||||+++.||.++.+.++.-|.+-  .|. .+...-|.+
T Consensus         4 ~~~~g~~~a~l~Y~~-~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv--~p~-C~y~~~~~~   70 (78)
T PF14542_consen    4 LKDDGEEIAELTYRE-DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKV--VPT-CSYVAKYFR   70 (78)
T ss_dssp             EESSTTEEEEEEEEE-SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EE--EET-SHHHHHHHH
T ss_pred             EEECCEEEEEEEEEe-CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEE--EEE-CHHHHHHHH
Confidence            356688999999988 5578888889999999999999999999999999999653  344 334445553

>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]

Probab=94.58  E-value=0.029  Score=57.17  Aligned_cols=59  Identities=20%  Similarity=0.277  Sum_probs=49.9

Q ss_pred             eEeeeeeeccCccCCChhHHHHHH-HHHHhhhcCccEEEEcChhhhHHHHHhccCcEEcCh
Q 002450          813 AELPLVATSKINHGKGYFQLLFAC-IEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP  872 (920)
Q Consensus       813 AElplvAT~~~yqgqG~gr~Lv~~-IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~  872 (920)
                      +-|-.+|+.++||.||++..|+.. |..+-..-=|.+.+|-+-+.+++||.+ |||+.+++
T Consensus       102 i~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvPFYEr-~gFk~vgp  161 (190)
T KOG4144|consen  102 IHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVPFYER-FGFKAVGP  161 (190)
T ss_pred             eeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccchhHh-cCceeecc
Confidence            567789999999999999999877 555555556778888888889999986 99999998

>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.57  E-value=0.011  Score=48.15  Aligned_cols=36  Identities=44%  Similarity=1.103  Sum_probs=28.9

Q ss_pred             cCCCcccCCCCCccCcchhcccccccccC----CCCCCCccCccchh
Q 002450          543 NGLGIICHCCNSEVSPSQFEAHAECASLS----SIPQGDWYCKYCQN  585 (920)
Q Consensus       543 tgdGI~CdCCn~evcPS~FEaHa~CL~Le----sIPsGdW~Cp~C~~  585 (920)
                      .++.|.|+.|+.     .|  |..|+++.    .++.+.|+|+.|+.
T Consensus        11 ~~~~i~C~~C~~-----~~--H~~C~~~~~~~~~~~~~~w~C~~C~~   50 (51)
T PF00628_consen   11 DGDMIQCDSCNR-----WY--HQECVGPPEKAEEIPSGDWYCPNCRP   50 (51)
T ss_dssp             TSSEEEBSTTSC-----EE--ETTTSTSSHSHHSHHSSSBSSHHHHH
T ss_pred             CCCeEEcCCCCh-----hh--CcccCCCChhhccCCCCcEECcCCcC
Confidence            466789999975     56  99999965    55667999999974

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the PHD (homeodomain) zinc finger domain [,], which is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in chromatin-mediated transcriptional regulation. The PHD finger motif is reminiscent of, but distinct from the C3HC4 type RING finger. The function of this domain is not yet known but in analogy with the LIM domain it could be involved in protein-protein interaction and be important for the assembly or activity of multicomponent complexes involved in transcriptional activation or repression. Alternatively, the interactions could be intra-molecular and be important in maintaining the structural integrity of the protein. In similarity to the RING finger and the LIM domain, the PHD finger is thought to bind two zinc ions. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0005515 protein binding; PDB: 3ZVY_A 2LGG_A 3SOW_A 3SOU_B 3ASL_A 3ASK_A 3ZVZ_B 3T6R_A 2LGK_A 3SOX_B ....

>KOG0957 consensus PHD finger protein [General function prediction only]

Probab=94.00  E-value=0.017  Score=66.93  Aligned_cols=116  Identities=27%  Similarity=0.580  Sum_probs=68.3

Q ss_pred             cCCCcccCCCCCccCcchhcccccccccC---CCCCC-------CccCccchh-------hhhhcc--ccc-cchhhhhc
Q 002450          543 NGLGIICHCCNSEVSPSQFEAHAECASLS---SIPQG-------DWYCKYCQN-------MFERKR--FLQ-HDANAVEA  602 (920)
Q Consensus       543 tgdGI~CdCCn~evcPS~FEaHa~CL~Le---sIPsG-------dW~Cp~C~~-------~f~~ek--~~~-~n~Na~aa  602 (920)
                      .++-|-|+-|+..|       |-+|++..   +||+|       .|||-.|..       .+|+.+  .+. .....|++
T Consensus       133 a~ei~qCd~CGi~V-------HEgCYGv~dn~si~s~~s~~stepWfCeaC~~Gvs~P~CElCPn~~GifKetDigrWvH  205 (707)
T KOG0957|consen  133 AGEILQCDKCGINV-------HEGCYGVLDNVSIPSGSSDCSTEPWFCEACLYGVSLPHCELCPNRFGIFKETDIGRWVH  205 (707)
T ss_pred             ccceeeccccCcee-------cccccccccccccCCCCccCCCCchhhhhHhcCCCCCccccCCCcCCcccccchhhHHH
Confidence            35668899998754       99999853   66764       599999974       345432  222 22333432


Q ss_pred             c----ccCCCChhhHHhhhhhhhhccccccc---cccccccCCCCCCCCCCCCceeecC--CCCCccccccCccCcC
Q 002450          603 G----RVSGVDSVEQITKRCIRIVKNLEAEL---SGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCLKKHKM  670 (920)
Q Consensus       603 g----~i~gvD~~e~i~~RC~R~vk~~e~e~---~~C~vC~~~df~~sgf~~~~LLlCD--QCer~YHv~CL~p~~~  670 (920)
                      -    -+.|+ ..-++..+|.=++.++....   ..|..|.+.-|.+.    |..+.||  .|..-|||+|.+--++
T Consensus       206 ~iCALYvpGV-afg~~~~l~~Vtl~em~ysk~Gak~Cs~Ced~~fARt----Gvci~CdaGMCk~YfHVTCAQk~Gl  277 (707)
T KOG0957|consen  206 AICALYVPGV-AFGQTHTLCGVTLEEMDYSKFGAKTCSACEDKIFART----GVCIRCDAGMCKEYFHVTCAQKLGL  277 (707)
T ss_pred             HHHHhhcCcc-ccccccccccccHHHhhhhhhccchhccccchhhhhc----ceeeeccchhhhhhhhhhHHhhhcc
Confidence            1    11222 11233344443344433222   46999988766543    4567777  6777899999976543

>smart00258 SAND SAND domain

Probab=93.49  E-value=0.064  Score=48.41  Aligned_cols=50  Identities=24%  Similarity=0.324  Sum_probs=39.6

Q ss_pred             eCCeeEeeCcCCCCCeecChhhhhhccccc-cCCcccceeccCCccHHHHHHH
Q 002450          260 RDGGILCSCSLCNGCRVIPPSKFEIHACKQ-YRRASQYICFENGKSLLEVLRA  311 (920)
Q Consensus       260 ~~~GilC~C~~C~~~~vvs~s~FE~HAGs~-~~~p~~~I~LenG~SL~~v~~a  311 (920)
                      ...|+++-|..+++ +-+||.+||.|||.. +++=-..| --||.+|+.+|+.
T Consensus        19 f~~G~~~kCI~~~~-~~~TP~eFe~~~g~~~~K~WK~sI-R~~g~~Lr~L~~~   69 (73)
T smart00258       19 FKCGISVKCIQYED-KWFTPKEFEIEGGKGKSKDWKRSI-RCGGSSLRTLMEN   69 (73)
T ss_pred             hhcCcccCCccCCC-EEEChHHHHhhcCCcccCCcchhe-eECCccHHHHHHc
Confidence            45589999999987 899999999999974 55533444 4579999999875

>KOG0954 consensus PHD finger protein [General function prediction only]

Probab=93.41  E-value=0.036  Score=66.94  Aligned_cols=50  Identities=32%  Similarity=0.830  Sum_probs=41.6

Q ss_pred             cccccccccCCCCCCCCCCCCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcch
Q 002450          628 ELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS  688 (920)
Q Consensus       628 e~~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~  688 (920)
                      +.-.|.+|+..|-+    ...+|++||.|.-..|+.|+.      +.++|+|.|.| ..|.
T Consensus       270 edviCDvCrspD~e----~~neMVfCd~Cn~cVHqaCyG------Ile~p~gpWlC-r~Ca  319 (893)
T KOG0954|consen  270 EDVICDVCRSPDSE----EANEMVFCDKCNICVHQACYG------ILEVPEGPWLC-RTCA  319 (893)
T ss_pred             ccceeceecCCCcc----ccceeEEeccchhHHHHhhhc------eeecCCCCeee-hhcc
Confidence            33579999987743    468999999999999999994      67899999999 6774

>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain

Probab=92.66  E-value=0.68  Score=43.28  Aligned_cols=64  Identities=8%  Similarity=-0.172  Sum_probs=55.1

Q ss_pred             eEEEEEeeCCeEEEEEEEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEc
Q 002450          788 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP  852 (920)
Q Consensus       788 fY~~VLe~~~~vVsaAslrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~Lvlp  852 (920)
                      ....++..+|++||++..-.++ +.+..-+.++.++|++.+.|..|+..+.+.+.+.|++.+=+-
T Consensus        71 ~~l~~~~~~g~~va~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g  134 (142)
T PF13480_consen   71 LRLFVLYDGGEPVAFALGFRHG-GTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFG  134 (142)
T ss_pred             EEEEEEEECCEEEEEEEEEEEC-CEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEEC
Confidence            4556677899999999776666 688899999999999999999999999999999999887543

>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]

Probab=92.60  E-value=0.16  Score=53.19  Aligned_cols=64  Identities=19%  Similarity=0.186  Sum_probs=49.1

Q ss_pred             eeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcC-ccEEEE--cChhhhHHHHHhccCcEEcChHH
Q 002450          811 EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLR-VKSIVL--PAAEEAESIWTDKFGFKKIDPEL  874 (920)
Q Consensus       811 ~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~Lg-Ve~Lvl--pA~~ea~~~Wt~kFGF~~i~~~e  874 (920)
                      ++.-+-.++|.+.||..|+|+.|++.+.+.....+ .+++++  .|..+..-.|.+++||+.+..-.
T Consensus        88 ~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~  154 (187)
T KOG3138|consen   88 RVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLK  154 (187)
T ss_pred             ceeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeeccc
Confidence            36778999999999999999999999999998888 555444  34444444444469999876543

>smart00249 PHD PHD zinc finger

Probab=92.38  E-value=0.077  Score=41.17  Aligned_cols=35  Identities=31%  Similarity=0.900  Sum_probs=27.6

Q ss_pred             ecCCCcccCCCCCccCcchhcccccccccCC---CCCCCccCccc
Q 002450          542 KNGLGIICHCCNSEVSPSQFEAHAECASLSS---IPQGDWYCKYC  583 (920)
Q Consensus       542 ktgdGI~CdCCn~evcPS~FEaHa~CL~Les---IPsGdW~Cp~C  583 (920)
                      ..+..|.|+.|++     .|  |..|+++..   .+...|+|+.|
T Consensus        10 ~~~~~i~C~~C~~-----~~--H~~C~~~~~~~~~~~~~~~C~~C   47 (47)
T smart00249       10 DGGELLQCDGCDR-----WY--HQTCLGPPLLEEEPDGKWYCPKC   47 (47)
T ss_pred             CCCCEEECCCCCc-----hh--hhhhCCCcccCCCCCCCEECcCC
Confidence            3566788998854     67  999998754   47889999987

The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in epigenetics and chromatin-mediated transcriptional regulation. The PHD finger binds two zinc ions using the so-called 'cross-brace' motif and is thus structurally related to the

>KOG0825 consensus PHD Zn-finger protein [General function prediction only]

Probab=92.26  E-value=0.059  Score=65.46  Aligned_cols=33  Identities=33%  Similarity=0.972  Sum_probs=28.1

Q ss_pred             CcccCCCCCccCcchhccccccccc--CCCCCCCccCccch
Q 002450          546 GIICHCCNSEVSPSQFEAHAECASL--SSIPQGDWYCKYCQ  584 (920)
Q Consensus       546 GI~CdCCn~evcPS~FEaHa~CL~L--esIPsGdW~Cp~C~  584 (920)
                      +|+|+.||+.+    |  |..||++  ..+|-+.|||++|.
T Consensus       230 LLLCDsCN~~~----Y--H~YCLDPdl~eiP~~eWYC~NC~  264 (1134)
T KOG0825|consen  230 LLLCDSCNKVY----Y--HVYCLDPDLSESPVNEWYCTNCS  264 (1134)
T ss_pred             heeecccccce----e--eccccCcccccccccceecCcch
Confidence            58999999851    4  9999996  46999999999995

>PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A

Probab=91.35  E-value=0.047  Score=42.83  Aligned_cols=33  Identities=36%  Similarity=1.075  Sum_probs=18.6

Q ss_pred             CceeecCCCCCccccccCccCcCCccCCCCCc-ceeecCcc
Q 002450          648 RTILLCDQCEREFHVGCLKKHKMADLRELPKG-KWFCCMDC  687 (920)
Q Consensus       648 ~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g-~WFC~~~C  687 (920)
                      +.|+.|+.|.-..|..|+.-      ..+|.+ +|+| ..|
T Consensus         2 n~ll~C~~C~v~VH~~CYGv------~~~~~~~~W~C-~~C   35 (36)
T PF13831_consen    2 NPLLFCDNCNVAVHQSCYGV------SEVPDGDDWLC-DRC   35 (36)
T ss_dssp             CEEEE-SSS--EEEHHHHT-------SS--SS------HHH
T ss_pred             CceEEeCCCCCcCChhhCCc------ccCCCCCcEEC-CcC
Confidence            47999999999999999953      455655 7999 566

>PF01342 SAND: SAND domain; InterPro: IPR000770 The SAND domain (named after Sp100, AIRE-1, NucP41/75, DEAF-1) is a conserved ~80 residue region found in a number of nuclear proteins, many of which function in chromatin-dependent transcriptional control

Probab=89.98  E-value=0.14  Score=47.01  Aligned_cols=55  Identities=27%  Similarity=0.470  Sum_probs=39.0

Q ss_pred             eEEEEe-----CCeeEeeCcCCCCCeecChhhhhhccccc-cCCcccceeccCCccHHHHHHH
Q 002450          255 LRGIIR-----DGGILCSCSLCNGCRVIPPSKFEIHACKQ-YRRASQYICFENGKSLLEVLRA  311 (920)
Q Consensus       255 L~G~I~-----~~GilC~C~~C~~~~vvs~s~FE~HAGs~-~~~p~~~I~LenG~SL~~v~~a  311 (920)
                      ++|++.     ..|+...|-.+. .+-+||.+||.|||.. +|+=-..|.. +|.+|..+|++
T Consensus        18 ~~G~L~~~k~~~~g~~~kCI~~~-g~~~TP~eFE~~~G~~~sK~WK~SIr~-~g~~L~~li~~   78 (82)
T PF01342_consen   18 VKGTLYKKKFVKQGICGKCIQCE-GRWFTPSEFERHGGKGSSKDWKRSIRC-GGEPLGKLIEK   78 (82)
T ss_dssp             EEEEEEHHHH-TTGTTSS-EEET-TEEE-HHHHHHHHTTCTCS-HHHHSEE-TTEEHHHHHHT
T ss_pred             eEEEEEHHHhhcccccCceEeeC-CcEECHHHHHhhcCcccCCCCCccEEE-CCEEHHHHHhh
Confidence            467665     345556677777 6799999999999985 5544456776 99999998874

These include proteins linked to various human diseases, such as the Sp100 (Speckled protein 100 kDa), NUDR (Nuclear DEAF-1 related), GMEB (Glucocorticoid Modulatory Element Binding) proteins and AIRE-1 (Autoimmune regulator 1) proteins. Proteins containing the SAND domain have a modular structure; the SAND domain can be associated with a number of other modules, including the bromodomain, the PHD finger and the MYND finger. Because no SAND domain has been found in yeast, it is thought that the SAND domain could be restricted to animal phyla. Many SAND domain-containing proteins, including NUDR, DEAF-1 (Deformed epidermal autoregulatory factor-1) and GMEB, have been shown to bind DNA sequences specifically. The SAND domain has been proposed to mediate the DNA binding activity of these proteins [, ]. The resolution of the 3D structure of the SAND domain from Sp100b has revealed that it consists of a novel alpha/beta fold. The SAND domain adopts a compact fold consisting of a strongly twisted, five-stranded antiparallel beta-sheet with four alpha-helices packing against one side of the beta-sheet. The opposite side of the beta-sheet is solvent exposed. The beta-sheet and alpha-helical parts of the structure form two distinct regions. Multiple hydrophobic residues pack between these regions to form a structural core. A conserved KDWK sequence motif is found within the alpha-helical, positively charged surface patch. The DNA binding surface has been mapped to the alpha-helical region encompassing the KDWK motif [].; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1OQJ_B 1UFN_A 1H5P_A.

>KOG0383 consensus Predicted helicase [General function prediction only]

Probab=89.74  E-value=0.22  Score=61.06  Aligned_cols=37  Identities=8%  Similarity=-0.025  Sum_probs=30.3

Q ss_pred             CCceeecCCCCCccccccCccCcCCccCCCCCcceeecCcch
Q 002450          647 PRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS  688 (920)
Q Consensus       647 ~~~LLlCDQCer~YHv~CL~p~~~~~L~evP~g~WFC~~~C~  688 (920)
                      ...+..|+.|+++||..|+++    .+..++..-|.| ..|.
T Consensus       186 ~~k~~~~a~~~~r~~~~~iKp----e~~~i~rii~~~-~s~~  222 (696)
T KOG0383|consen  186 KGKLVPYADLEERFLLYGIKP----EWMPIARIINRR-SSQK  222 (696)
T ss_pred             Cccccccccchhhhhheeccc----cccccchhhhhh-cccc
Confidence            467888999999999999999    456677888888 5675

>KOG1473 consensus Nucleosome remodeling factor, subunit NURF301/BPTF [Chromatin structure and dynamics; Transcription]

Probab=89.73  E-value=0.07  Score=67.01  Aligned_cols=113  Identities=22%  Similarity=0.350  Sum_probs=68.5

Q ss_pred             CCCcccCCCCCccCcchhccccccccc--CCCCCCCccCccchhhhhhccccccchhhhhccccCCCChhhH-Hh-hhhh
Q 002450          544 GLGIICHCCNSEVSPSQFEAHAECASL--SSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQ-IT-KRCI  619 (920)
Q Consensus       544 gdGI~CdCCn~evcPS~FEaHa~CL~L--esIPsGdW~Cp~C~~~f~~ek~~~~n~Na~aag~i~gvD~~e~-i~-~RC~  619 (920)
                      ++..+|.-     ||.-+  |.+|...  ..+|+..|-|--|..  ++       .|    |-++++-+.+. .. .|+.
T Consensus       354 ~~~lc~Et-----~prvv--hlEcv~hP~~~~~s~~~e~evc~~--hk-------vn----gvvd~vl~~~K~~~~iR~~  413 (1414)
T KOG1473|consen  354 GDLLCCET-----CPRVV--HLECVFHPRFAVPSAFWECEVCNI--HK-------VN----GVVDCVLPPSKNVDSIRHT  413 (1414)
T ss_pred             cceeeccc-----CCceE--EeeecCCccccCCCccchhhhhhh--hc-------cC----cccccccChhhcccceecc
Confidence            44555544     57777  9999874  579999999998852  21       11    11112211110 00 0111


Q ss_pred             -----hhhccccccccccccccCCCCCCCCCCCCceeecCC-CCCcccc-ccCccCcCCccCCCCCcceeecCcch
Q 002450          620 -----RIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQ-CEREFHV-GCLKKHKMADLRELPKGKWFCCMDCS  688 (920)
Q Consensus       620 -----R~vk~~e~e~~~C~vC~~~df~~sgf~~~~LLlCDQ-Cer~YHv-~CL~p~~~~~L~evP~g~WFC~~~C~  688 (920)
                           |.-..-......|.||+.         +++.+.|+. |++.||. .||+..-.  -..++++-|+| ++|-
T Consensus       414 ~iG~dr~gr~ywfi~rrl~Ie~~---------det~l~yysT~pqly~ll~cLd~~~~--e~~L~d~i~~~-~ee~  477 (1414)
T KOG1473|consen  414 PIGRDRYGRKYWFISRRLRIEGM---------DETLLWYYSTCPQLYHLLRCLDRTYV--EMYLCDGIWER-REEI  477 (1414)
T ss_pred             CCCcCccccchhceeeeeEEecC---------CCcEEEEecCcHHHHHHHHHhchHHH--HHhhccchhhh-HHHH
Confidence                 110111223457999986         578999998 9999999 99984211  13578999999 7884

>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans

Probab=89.66  E-value=1.8  Score=45.29  Aligned_cols=83  Identities=16%  Similarity=0.158  Sum_probs=57.2

Q ss_pred             EEEEEeeCCeEEEEEEEEE-eC----Ce--eeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHH
Q 002450          789 YCAILTVNSSVVSAGILRV-FG----QE--VAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIW  861 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI-~G----~~--vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~W  861 (920)
                      |.++|.-.++||+.+++=. +.    .+  +--+=+.=+.|+|||+|+++.+...+-+.+..-+ ...++-+...+..+|
T Consensus        48 ~~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~-~N~~~~~~~~~~~~w  126 (181)
T PF06852_consen   48 VLTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVD-DNSVAQGNVKMSNFW  126 (181)
T ss_pred             EEEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCC-CceeeecCHHHHHHH
Confidence            5555555567888776633 31    23  4445555589999999999755554445555543 456667888899999


Q ss_pred             HhccCcEEcCh
Q 002450          862 TDKFGFKKIDP  872 (920)
Q Consensus       862 t~kFGF~~i~~  872 (920)
                      .+-|||..++.
T Consensus       127 ~k~~G~~~~~h  137 (181)
T PF06852_consen  127 HKMFGFDDYGH  137 (181)
T ss_pred             HHHhCCCCCcc
Confidence            99999988877

Note that some proteins in the entry contain more than one copy of this region.

>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]

Probab=88.90  E-value=0.55  Score=53.48  Aligned_cols=83  Identities=19%  Similarity=0.223  Sum_probs=63.0

Q ss_pred             ceeCceEEEEEeeCCeEEEEEEEEEe------CC---eeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcC
Q 002450          783 QEFGGMYCAILTVNSSVVSAGILRVF------GQ---EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPA  853 (920)
Q Consensus       783 ~~f~GfY~~VLe~~~~vVsaAslrI~------G~---~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA  853 (920)
                      +++.++|.+  ..+.+++|  .|++.      |.   ..|=|-.||+-|+|||+|+-|+|+....+..+.-|+.-.+|-.
T Consensus        36 l~~~n~~vi--~~nqkl~s--~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P  111 (389)
T COG4552          36 LAEPNSYVI--YMNQKLAS--RLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHP  111 (389)
T ss_pred             ccCCcceEE--eehhhhhh--cccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEecc
Confidence            556667765  66777655  33332      44   4466778999999999999999999999999999999888765


Q ss_pred             hhhhHHHHHhccCcEEcCh
Q 002450          854 AEEAESIWTDKFGFKKIDP  872 (920)
Q Consensus       854 ~~ea~~~Wt~kFGF~~i~~  872 (920)
                      .  ..++|. ||||..-+.
T Consensus       112 ~--s~~iYr-KfGye~asn  127 (389)
T COG4552         112 F--SGGIYR-KFGYEYASN  127 (389)
T ss_pred             C--chhhHh-hccccccce
Confidence            3  566886 599986554

>PF07897 DUF1675: Protein of unknown function (DUF1675); InterPro: IPR012463 The members of this family are sequences derived from hypothetical plant proteins of unknown function

Probab=88.58  E-value=0.75  Score=51.14  Aligned_cols=69  Identities=17%  Similarity=0.275  Sum_probs=49.0

Q ss_pred             CcchHHHhhcCCCCCceEEEEcCCccccceeEEEEeCCe------eEeeCcCCCCCeecChhhhhhccccc-cCCcccce
Q 002450          225 PMTVTELFETGLLDGVSVVYMGGIKFQASGLRGIIRDGG------ILCSCSLCNGCRVIPPSKFEIHACKQ-YRRASQYI  297 (920)
Q Consensus       225 p~~vk~Ll~tGlLeG~~V~Y~~~~~~~~~~L~G~I~~~G------ilC~C~~C~~~~vvs~s~FE~HAGs~-~~~p~~~I  297 (920)
                      +.+...-..+.+++.+|-.+-.+.+-++....|+.+.-|      |.|-|.    -.-+||.+|=.|||.. .-||-.||
T Consensus       208 ~~~~~~~~~~~~~~~mp~v~t~g~gpng~~i~g~ly~y~~~~~v~i~c~ch----g~~~~~~efv~h~~~~~~~~p~~hi  283 (284)
T PF07897_consen  208 RTNSGGDGSRNMMEDMPCVSTTGDGPNGKRIEGFLYKYGKGEEVRIVCVCH----GSFLSPAEFVKHAGGGDVANPLRHI  283 (284)
T ss_pred             cccccccccccccccCCceeeccCCCCCceeeEEEEEecCCCeEEEEEEec----CCCCCHHHHHHhcCCCCcCCchhcc
Confidence            344444455666777776555443334566788877653      888888    5599999999999984 77999988

One member of this family (Q9SFV5 from SWISSPROT) is annotated as a putative RNA-binding protein, but no evidence was found to support this.

>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]

Probab=87.92  E-value=0.46  Score=55.66  Aligned_cols=65  Identities=22%  Similarity=0.278  Sum_probs=50.5

Q ss_pred             EEEEeCCeeeEeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhhHHHHHhccCcEEcCh
Q 002450          804 ILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP  872 (920)
Q Consensus       804 slrI~G~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~  872 (920)
                      -|||+|..+..=.   ....+|.||||+.||...|+.+++-+.+++.+-+.-.+..-|. ||||...++
T Consensus       445 elhvyg~~vpig~---~~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG~ReYy~-k~GY~~~gp  509 (515)
T COG1243         445 ELHVYGSEVPIGK---REDEWQHRGYGRELLEEAERIAREEGAKKILVISGIGVREYYR-KLGYELDGP  509 (515)
T ss_pred             hhhcccccccccc---CcchhhcccHHHHHHHHHHHHHHhhccccEEEEecccHHHHHH-HhCccccCC
Confidence            4668886443322   2578999999999999999999999999987777666666665 699987654

>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]

Probab=87.82  E-value=0.5  Score=48.57  Aligned_cols=55  Identities=11%  Similarity=0.132  Sum_probs=42.5

Q ss_pred             EeeeeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEc---ChhhhHHHHHhccCcEE
Q 002450          814 ELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP---AAEEAESIWTDKFGFKK  869 (920)
Q Consensus       814 ElplvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~Lvlp---A~~ea~~~Wt~kFGF~~  869 (920)
                      -+--+++.|+|||+|++..||+.+|+.....+.--+.|-   .-.-|..+|++ |||.+
T Consensus        71 HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkk-LGY~~  128 (173)
T KOG3234|consen   71 HVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKK-LGYSV  128 (173)
T ss_pred             EEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHh-cCceE
Confidence            345578899999999999999999999877654443333   33458999985 99975

>KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription]

Probab=86.82  E-value=0.28  Score=53.90  Aligned_cols=37  Identities=27%  Similarity=0.767  Sum_probs=30.0

Q ss_pred             CCCcccCCCCCccCcchhccccccccc--CCCCCCCccCccchhhh
Q 002450          544 GLGIICHCCNSEVSPSQFEAHAECASL--SSIPQGDWYCKYCQNMF  587 (920)
Q Consensus       544 gdGI~CdCCn~evcPS~FEaHa~CL~L--esIPsGdW~Cp~C~~~f  587 (920)
                      ..+++||-|+.     .|  |..||..  ...|+|.|.|.-|...|
T Consensus       294 dqllfcddcdr-----gy--hmyclsppm~eppegswsc~KOG~~~  332 (336)
T KOG1244|consen  294 DQLLFCDDCDR-----GY--HMYCLSPPMVEPPEGSWSCHLCLEEL  332 (336)
T ss_pred             ceeEeecccCC-----ce--eeEecCCCcCCCCCCchhHHHHHHHH
Confidence            45678999987     55  9999985  46799999999997654

>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]

Probab=86.65  E-value=1.7  Score=44.88  Aligned_cols=84  Identities=17%  Similarity=0.222  Sum_probs=61.9

Q ss_pred             EEEEEeeCCeEEEEEEEEEeC-----CeeeEeeeeeeccCccCCChhHHHHHHHHHH-hhhcCccEEEEcChh---hhHH
Q 002450          789 YCAILTVNSSVVSAGILRVFG-----QEVAELPLVATSKINHGKGYFQLLFACIEKL-LSFLRVKSIVLPAAE---EAES  859 (920)
Q Consensus       789 Y~~VLe~~~~vVsaAslrI~G-----~~vAElplvAT~~~yqgqG~gr~Lv~~IE~~-L~~LgVe~LvlpA~~---ea~~  859 (920)
                      |++- ..+|+|||-.....+.     ..-.-|-.+||...|||.|+++.||..-.+. +...+.+.+=|..+.   .|..
T Consensus        44 yVA~-D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~  122 (193)
T KOG3235|consen   44 YVAE-DENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALH  122 (193)
T ss_pred             EEEE-cCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHH
Confidence            5552 2678999977766653     1134577999999999999999999875554 455666666666554   5799


Q ss_pred             HHHhccCcEEcChH
Q 002450          860 IWTDKFGFKKIDPE  873 (920)
Q Consensus       860 ~Wt~kFGF~~i~~~  873 (920)
                      .|++.+||.+.+-+
T Consensus       123 LY~~tl~F~v~eve  136 (193)
T KOG3235|consen  123 LYKNTLGFVVCEVE  136 (193)
T ss_pred             hhhhccceEEeecc
Confidence            99999999987653

>KOG1512 consensus PHD Zn-finger protein [General function prediction only]

Probab=86.58  E-value=0.3  Score=53.87  Aligned_cols=41  Identities=27%  Similarity=0.800  Sum_probs=32.9

Q ss_pred             eecceecCCCcccCCCCCccCcchhcccccccccCCCCCCCccCcc-ch
Q 002450          537 LLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKY-CQ  584 (920)
Q Consensus       537 lL~G~ktgdGI~CdCCn~evcPS~FEaHa~CL~LesIPsGdW~Cp~-C~  584 (920)
                      .++-.+..+-++||-|+.     .|  |.-|++|..+|+|.|-|.. |.
T Consensus       320 C~~P~~E~E~~FCD~CDR-----G~--HT~CVGL~~lP~G~WICD~~C~  361 (381)
T KOG1512|consen  320 CLGPVIESEHLFCDVCDR-----GP--HTLCVGLQDLPRGEWICDMRCR  361 (381)
T ss_pred             cCCcccchheeccccccC-----CC--CccccccccccCccchhhhHHH
Confidence            355566777788888876     67  9999999999999999983 43

>KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only]

Probab=85.50  E-value=0.41  Score=57.76  Aligned_cols=97  Identities=25%  Similarity=0.513  Sum_probs=54.0

Q ss_pred             CcccCCCCCccCcchhccccccccc--CCCCCCCccCccchhhhhhccccccchhhhhccccCCCChhhHHhhhhhhhhc
Q 002450          546 GIICHCCNSEVSPSQFEAHAECASL--SSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVK  623 (920)
Q Consensus       546 GI~CdCCn~evcPS~FEaHa~CL~L--esIPsGdW~Cp~C~~~f~~ek~~~~n~Na~aag~i~gvD~~e~i~~RC~R~vk  623 (920)
                      +.+|+.|+.     +|  |-.|..+  ..||+|.|+|+.|..-..-+-.+..+.+.|-.+.       .+ .--|+    
T Consensus        83 f~~Ck~cDv-----sy--h~yc~~P~~~~v~sg~~~ckk~~~c~qc~~~lpg~s~~~~~~~-------~~-~~~c~----  143 (694)
T KOG4443|consen   83 FLLCKRCDV-----SY--HCYCQKPPNDKVPSGPWLCKKCTRCRQCDSTLPGLSLDLQEGY-------LQ-CAPCA----  143 (694)
T ss_pred             ccccccccc-----cc--cccccCCccccccCcccccHHHHhhhhccccccccchhhhccC-------cc-ccccc----
Confidence            467888865     67  9889874  6899999999998521111111111111111000       00 00111    


Q ss_pred             cccccccccccccCCCCCCCCCCCCceeecCCCCCccccccCccC
Q 002450          624 NLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKH  668 (920)
Q Consensus       624 ~~e~e~~~C~vC~~~df~~sgf~~~~LLlCDQCer~YHv~CL~p~  668 (920)
                          ....|.+|-..-..   ...-.++.|++|.+.-|-.|-.-.
T Consensus       144 ----s~~~cPvc~~~Y~~---~e~~~~~~c~~c~rwsh~~c~~~s  181 (694)
T KOG4443|consen  144 ----SLSYCPVCLIVYQD---SESLPMVCCSICQRWSHGGCDGIS  181 (694)
T ss_pred             ----ccccCchHHHhhhh---ccchhhHHHHHhcccccCCCCccc
Confidence                12457777542111   012345899999999999998653

>COG3981 Predicted acetyltransferase [General function prediction only]

Probab=84.90  E-value=1.7  Score=45.30  Aligned_cols=70  Identities=16%  Similarity=0.148  Sum_probs=54.8

Q ss_pred             CceEEEEEeeCCeEEEEEEEEEeCCeeeEee-----eeeeccCccCCChhHHHHHHHHHHhhhcCccEEEEcChhhh
Q 002450          786 GGMYCAILTVNSSVVSAGILRVFGQEVAELP-----LVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEA  857 (920)
Q Consensus       786 ~GfY~~VLe~~~~vVsaAslrI~G~~vAElp-----lvAT~~~yqgqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea  857 (920)
                      .-.|-++-+ ++++||...||-.=.+ ..++     --+|+|.-||+||++.++.-..+.++.||++.+.+-++.+-
T Consensus        68 ~~~y~~v~~-d~~ivG~i~lRh~Ln~-~ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN  142 (174)
T COG3981          68 ASTYWAVDE-DGQIVGFINLRHQLND-FLLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDN  142 (174)
T ss_pred             ceeEEEEec-CCcEEEEEEeeeecch-HHHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCC
Confidence            335666655 8999999999975211 1222     23589999999999999999999999999999998887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	920
1z4r_A	168	General control of amino acid synthesis protein 5-	6e-14
1qst_A	160	TGCN5 histone acetyl transferase; GCN5-related N-a	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07
1ygh_A	164	ADA4, protein (transcriptional activator GCN5); tr	3e-08
2kwj_A	114	Zinc finger protein DPF3; acetyl-lysine, transcrip	9e-08
2kwj_A	114	Zinc finger protein DPF3; acetyl-lysine, transcrip	2e-04
2e6r_A	92	Jumonji/ARID domain-containing protein 1D; PHD dom	1e-07
2ysm_A	111	Myeloid/lymphoid or mixed-lineage leukemia protein	2e-07
2ysm_A	111	Myeloid/lymphoid or mixed-lineage leukemia protein	7e-04
1f62_A	51	Transcription factor WSTF; Zn-finger; NMR {Homo sa	3e-07
3v43_A	112	Histone acetyltransferase KAT6A; MOZ, PHD finger,	8e-07
3v43_A	112	Histone acetyltransferase KAT6A; MOZ, PHD finger,	1e-05
2yql_A	56	PHD finger protein 21A; PHD domain, structural gen	4e-06
2l43_A	88	N-teminal domain from histone H3.3, linker, PHD1 f	4e-06
2l43_A	88	N-teminal domain from histone H3.3, linker, PHD1 f	4e-04
2l5u_A	61	Chromodomain-helicase-DNA-binding protein 4; CHD4,	6e-06
2puy_A	60	PHD finger protein 21A; PHD finger, histone CODE,	7e-06
1fp0_A	88	KAP-1 corepressor; PHD domain, C3HC4 type zinc bin	1e-05
1mm2_A	61	MI2-beta; PHD, zinc finger, protein scaffold, DNA	2e-05
1wev_A	88	Riken cDNA 1110020M19; structural genomics, PHD do	2e-05
3asl_A	70	E3 ubiquitin-protein ligase UHRF1; histone reader	5e-05
2e6s_A	77	E3 ubiquitin-protein ligase UHRF2; PHD domain, str	5e-05
1xwh_A	66	Autoimmune regulator; PHD domain, Zn binding domai	5e-05
2yt5_A	66	Metal-response element-binding transcription facto	6e-05
2ku3_A	71	Bromodomain-containing protein 1; PHD finger, chro	6e-05
2ku3_A	71	Bromodomain-containing protein 1; PHD finger, chro	1e-04
3shb_A	77	E3 ubiquitin-protein ligase UHRF1; unmodified hist	9e-05
3ask_A	226	E3 ubiquitin-protein ligase UHRF1; histone reader	1e-04
2k16_A	75	Transcription initiation factor TFIID subunit 3; p	1e-04
3ql9_A	129	Transcriptional regulator ATRX; zinc finger, trans	2e-04
2g6q_A	62	Inhibitor of growth protein 2; protein-peptide com	5e-04
2jmi_A	90	Protein YNG1, ING1 homolog 1; PHD, histone, recogn	5e-04
2ro1_A	189	Transcription intermediary factor 1-beta; KAP, TIF	7e-04

>1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* Length = 168

 Score = 70.0 bits (171), Expect = 6e-14
 Identities = 29/181 (16%), Positives = 52/181 (28%), Gaps = 26/181 (14%)

Query: 729 VRWRLLSGK---AATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEF 785
           + + ++       A     L L     +F      +      ++ I  +V+         
Sbjct: 5   IEFHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPRM-----PKEYIARLVFDPK------ 53

Query: 786 GGMYCAILTVNSSVVSAGILRVF-GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFL 844
                  L  +  V+     R+F  Q   E+   A +     KGY   L   +++     
Sbjct: 54  --HKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKH 111

Query: 845 RVKSIVLPAAEEAESIWTDKFGFKK---IDPELLSIYRKRCSQLVTFKGTSMLQKRVPAC 901
            +   +  A E A   +  K GF K   +       Y K          T M  +  P  
Sbjct: 112 NILYFLTYADEYAIGYFK-KQGFSKDIKVPKSRYLGYIKDYEG-----ATLMECELNPRI 165

Query: 902 R 902
            
Sbjct: 166 P 166

>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* Length = 160

 Score = 62.6 bits (152), Expect = 1e-11
 Identities = 33/178 (18%), Positives = 56/178 (31%), Gaps = 23/178 (12%)

Query: 729 VRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGM 788
           + + +L+    T     LL     IF             ++ I  +V+ R+         
Sbjct: 1   LDFDILTNDG-THRNMKLLIDLKNIFSRQL-----PKMPKEYIVKLVFDRHHES------ 48

Query: 789 YCAILTVNSSVVSAGILRVF-GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVK 847
              IL     V+     R +  Q  AE+  +A +     +GY   L    +  +    ++
Sbjct: 49  -MVILKNKQKVIGGICFRQYKPQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIE 107

Query: 848 SIVLPAAEEAESIWTDKFGFKK---IDPELLSIYRKRCSQLVTFKGTSMLQKRVPACR 902
            ++  A   A   +  K GF K   +  E    Y K         GT M     P   
Sbjct: 108 YLLTYADNFAIG-YFKKQGFTKEHRMPQEKWKGYIKDYDG-----GTLMECYIHPYVD 159

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 64.9 bits (157), Expect = 1e-10
 Identities = 102/697 (14%), Positives = 207/697 (29%), Gaps = 237/697 (34%)

Query: 65  NSDDLLED----DVID--KRINSKIHEGRINKVVKNVLNENG-------ILESVVEEENQ 111
             D  +++    DV D  K I SK       + + +++           +  +++ ++ +
Sbjct: 25  FEDAFVDNFDCKDVQDMPKSILSK-------EEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77

Query: 112 LVQMTVENVIEETVKGKKAPICKEEPISK-------VECFPRKEGGSEVSNGLNKKCLKR 164
           +VQ  VE V+    K   +PI K E           +E   R    ++V     K  + R
Sbjct: 78  MVQKFVEEVLRINYKFLMSPI-KTEQRQPSMMTRMYIEQRDRLYNDNQV---FAKYNVSR 133

Query: 165 PSAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKK 224
                   +P   L                        AL      LEL+ +K +     
Sbjct: 134 L-------QPYLKLRQ----------------------AL------LELRPAKNV----- 153

Query: 225 PMTVTELFETGLLDGVSVVYMGGI-KFQASGLRGIIRDGGILCSC---SLCNGCRVIPPS 280
                      L+DG     + G  K                 +     +C   +V    
Sbjct: 154 -----------LIDG-----VLGSGK-----------------TWVALDVCLSYKVQCKM 180

Query: 281 KFEIH--ACKQYRRAS------QYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLP 332
            F+I     K            Q + ++   +     R+  S  + +   ++Q+ L  L 
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS--RSDHSSNIKLRIHSIQAELRRLL 238

Query: 333 EEKSFA-C------VRCKGT---FPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIR 382
           + K +  C      V+       F ++C  K     L  +  K      +   TT I + 
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSC--KI----LLTTRFKQVTDFLSAATTTHISLD 292

Query: 383 ASGPKLVSRSSENDSMCISYQNNK-----RERKKTRKLLEADLVSKSSSKSVSLRNLLKT 437
                L     E  S+ + Y + +     RE   T     + ++++      S+R+ L T
Sbjct: 293 HHSMTLT--PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS-IIAE------SIRDGLAT 343

Query: 438 RSPWELTRNSSRPGLIANSTPVTSVHKSS------QSQRQR-----------KITKKSKK 480
              W+  ++        N   +T++ +SS         R+             I      
Sbjct: 344 ---WDNWKHV-------NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI--- 390

Query: 481 TVL----ISKPFENASPPLS-FPNKS---RWNITPKDQR--LHKLVFDESGLPDGTEVGY 530
            +L          +    ++     S   +    PK+    +  +  +     +      
Sbjct: 391 -LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ---PKESTISIPSIYLELKVKLE----NE 442

Query: 531 YACGQKLLEGYKNGLGIICHCCNSEVSPS------QFEAHAECASLSSIPQGDWYCKYCQ 584
           YA  + +++ Y           +  + P           H     L +I   +       
Sbjct: 443 YALHRSIVDHYNIPK---TFDSDDLIPPYLDQYFYSHIGH----HLKNIEHPERM----- 490

Query: 585 NMFERK----RFLQ----HDANAVEAGRVSGVDSVEQ-------ITKRCI---RIVKNLE 626
            +F       RFL+    HD+ A  A   S +++++Q       I        R+V  + 
Sbjct: 491 TLFRMVFLDFRFLEQKIRHDSTAWNA-SGSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549

Query: 627 AELSGC----LLCRGCDFSKSGFGPRTILLCDQCERE 659
             L       +  +  D  +         + ++  ++
Sbjct: 550 DFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQ 586

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 7e-07
 Identities = 77/617 (12%), Positives = 168/617 (27%), Gaps = 196/617 (31%)

Query: 386 PKLVSRSSENDSMCISYQNNKRERKKTRKLLEADLVSKSSSKSVSLRNLLKTRSPWELTR 445
           PK +    E D + +S    K     T +L    L  +       +  +L+    + ++ 
Sbjct: 42  PKSILSKEEIDHIIMS----KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP 97

Query: 446 NSSR---PGLIAN--STPVTSVHKSSQS------QRQRKITK-KSK-------------- 479
             +    P ++          ++  +Q        R +   K +                
Sbjct: 98  IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157

Query: 480 -----KTVLISKPFENASPPLSFPNKSRW-NI----TPKD-----QRL-HKLVFDESGLP 523
                KT +      +         K  W N+    +P+      Q+L +++  + +   
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 524 DGTEVGYYACGQ------KLL--EGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQ 575
           D +               +LL  + Y+N L ++ +  N++   + F              
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA-FNLS----------- 265

Query: 576 GDWYCKYCQNMF-ERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAE--LSGC 632
                  C+ +   R + +    +A     +S       +T          E +  L   
Sbjct: 266 -------CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD--------EVKSLLLKY 310

Query: 633 LLCRGCDFSKS--GFGPRTILLCDQCEREF--------HVGCLKKHKM----------AD 672
           L CR  D  +      PR + +  +  R+         HV C K   +          A+
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370

Query: 673 LREL-------PKGKWFCCMDCSRI-NSVLQ----NLLVQEAEK-LPEFH-LNAIKKYAG 718
            R++       P          + I   +L     +++  +    + + H  + ++K   
Sbjct: 371 YRKMFDRLSVFPPS--------AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422

Query: 719 NSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVY-- 776
            S  ++  I +  ++           ++    +    D  D I   +          Y  
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ--------YFY 474

Query: 777 ---GRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLL 833
              G +L+  E                         + +    +V          +    
Sbjct: 475 SHIGHHLKNIE-----------------------HPERMTLFRMV----------FLD-- 499

Query: 834 FACIEKLLSFLRVKSIVLPAAEEAESIWTDKFG--------FKKIDP---ELLSIYRK-- 880
                    FL  K      A  A     +               DP    L++      
Sbjct: 500 -------FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFL 552

Query: 881 -RCSQ-LVTFKGTSMLQ 895
            +  + L+  K T +L+
Sbjct: 553 PKIEENLICSKYTDLLR 569

>1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 Length = 164

 Score = 53.3 bits (128), Expect = 3e-08
 Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 13/132 (9%)

Query: 740 TPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSV 799
           T E  ++L+    IF             ++ I  +VY R+           A++    +V
Sbjct: 12  TKENMMVLTGLKNIFQKQL-----PKMPKEYIARLVYDRSHLS-------MAVIRKPLTV 59

Query: 800 VSAGILRVF-GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAE 858
           V     R F  +E AE+   A S     +GY   L   ++  +         L  A+   
Sbjct: 60  VGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYA 119

Query: 859 SIWTDKFGFKKI 870
             +  K GF K 
Sbjct: 120 IGYFKKQGFTKE 131

>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A* Length = 114

 Score = 50.4 bits (120), Expect = 9e-08
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 9/79 (11%)

Query: 613 QITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMAD 672
           Q T      VK  + +   C  C  C    +      +L CD C+R +H+ CL       
Sbjct: 39  QFTLNMTEAVKTYKWQCIECKSCILC---GTSENDDQLLFCDDCDRGYHMYCLN----PP 91

Query: 673 LRELPKGKWFC--CMDCSR 689
           + E P+G W C  C +  +
Sbjct: 92  VAEPPEGSWSCHLCWELLK 110

>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A* Length = 114

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 7/66 (10%)

Query: 630 SGCLLCRGCDFSKSGFG-PRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC----- 683
           S C  C G        G P  ++ C  C R  H  CL+   +     +   KW C     
Sbjct: 2   SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFT-LNMTEAVKTYKWQCIECKS 60

Query: 684 CMDCSR 689
           C+ C  
Sbjct: 61  CILCGT 66

>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 92

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 9/58 (15%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDC 687
             +C+ C     G     +L CD C+  +H+ CL       L E+P+G W C  C+  
Sbjct: 16  SYICQVC---SRGDEDDKLLFCDGCDDNYHIFCLL----PPLPEIPRGIWRCPKCILA 66

>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} Length = 111

 Score = 49.2 bits (117), Expect = 2e-07
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCS 688
           C  C+ C   K       +L+CD C++ +H  CL+      ++ +P   W C  C  C 
Sbjct: 51  CPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQP----VMKSVPTNGWKCKNCRICI 105

>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} Length = 111

 Score = 39.2 bits (91), Expect = 7e-04
 Identities = 12/60 (20%), Positives = 18/60 (30%), Gaps = 9/60 (15%)

Query: 635 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC-----CMDCSR 689
              C    S         C  C + +H  CL       +  L +  W C     C +C +
Sbjct: 7   GANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIA----VTPLKRAGWQCPECKVCQNCKQ 62

>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2 Length = 51

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 9/56 (16%)

Query: 635 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCS 688
           C+ C   +       ++LCD+C + FH+ CL+      L E+P G+W C  C   +
Sbjct: 3   CKVC---RKKGEDDKLILCDECNKAFHLFCLR----PALYEVPDGEWQCPACQPAT 51

>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A Length = 112

 Score = 47.7 bits (113), Expect = 8e-07
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 7/76 (9%)

Query: 613 QITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMAD 672
           + +      VK L  +   C  C  C     G     +L CD C+R FH+ C        
Sbjct: 42  KFSPELTVRVKALRWQCIECKTCSSC--RDQGKNADNMLFCDSCDRGFHMECCD----PP 95

Query: 673 LRELPKGKWFCCMDCS 688
           L  +PKG W  C  C 
Sbjct: 96  LTRMPKGMWI-CQICR 110

>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A Length = 112

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 16/77 (20%), Positives = 22/77 (28%), Gaps = 6/77 (7%)

Query: 628 ELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC---- 683
            +  C  C G         P  ++ C  C    H  CL K        +   +W C    
Sbjct: 4   PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCL-KFSPELTVRVKALRWQCIECK 62

Query: 684 -CMDCSRINSVLQNLLV 699
            C  C        N+L 
Sbjct: 63  TCSSCRDQGKNADNMLF 79

>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 56

 Score = 43.9 bits (104), Expect = 4e-06
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 13/52 (25%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 683
           C +CR             +L+CD C R +H+ CL       L+ +PKG W C
Sbjct: 12  CSVCRKSG---------QLLMCDTCSRVYHLDCLD----PPLKTIPKGMWIC 50

>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} Length = 88

 Score = 45.0 bits (106), Expect = 4e-06
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 7/52 (13%)

Query: 547 IICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDAN 598
           + C  CN  V       H EC  +  IP+G W C++C     R     H  +
Sbjct: 43  LFCDMCNLAV-------HQECYGVPYIPEGQWLCRHCLQSRARPALEHHHHH 87

>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} Length = 88

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 10/53 (18%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCC 684
           C +C   +          IL CD C    H  C        +  +P+G+W C 
Sbjct: 28  CSICMDGE----SQNSNVILFCDMCNLAVHQECY------GVPYIPEGQWLCR 70

>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens} Length = 61

 Score = 43.6 bits (103), Expect = 6e-06
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 13/52 (25%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 683
           C +C+             I+LCD C R +H+ CL      D+ + P+GKW C
Sbjct: 14  CEVCQQGG---------EIILCDTCPRAYHMVCLD----PDMEKAPEGKWSC 52

>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens} Length = 60

 Score = 43.2 bits (102), Expect = 7e-06
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 13/52 (25%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 683
           C +CR             +L+CD C R +H+ CL       L+ +PKG W C
Sbjct: 8   CSVCRKSG---------QLLMCDTCSRVYHLDCLD----PPLKTIPKGMWIC 46

>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2 Length = 88

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 12/58 (20%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDC 687
             +CR C        P  +++C+QCE  FH+ C        L+++P  +W C  C   
Sbjct: 25  ATICRVCQ------KPGDLVMCNQCEFCFHLDCHL----PALQDVPGEEWSCSLCHVL 72

>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A Length = 61

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 13/52 (25%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 683
           C +C+             +L CD C   +H+ CL       L E+P G+W C
Sbjct: 12  CRVCKDGG---------ELLCCDTCPSSYHIHCLN----PPLPEIPNGEWLC 50

>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2 Length = 88

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 4/52 (7%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 683
           C++CR    +        ++ C +C   +H  C K          P+  W+C
Sbjct: 19  CVVCRQMTVASGN----QLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYC 66

>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B Length = 70

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 11/54 (20%)

Query: 631 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELP-KGKWFC 683
            C LC G         P   L+CD+C+  FH+ CL       L  +P + +W+C
Sbjct: 20  ACHLCGGRQ------DPDKQLMCDECDMAFHIYCLDPP----LSSVPSEDEWYC 63

>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 77

 Score = 41.7 bits (98), Expect = 5e-05
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 8/50 (16%)

Query: 635 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKG-KWFC 683
           CR C        P   LLCD+C   +H+ CL       L ++P+   W+C
Sbjct: 29  CRVC---GGKHEPNMQLLCDECNVAYHIYCLN----PPLDKVPEEEYWYC 71

>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A Length = 66

 Score = 40.9 bits (96), Expect = 5e-05
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 13/52 (25%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 683
           C +CR             ++ CD C R FH+ CL       LRE+P G W C
Sbjct: 11  CAVCRDGG---------ELICCDGCPRAFHLACLS----PPLREIPSGTWRC 49

>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus} Length = 66

 Score = 41.0 bits (96), Expect = 6e-05
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 5/52 (9%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 683
           C +C+          P  +++CD+C + +H  C   H +         KW C
Sbjct: 9   CTICQEEYSEA----PNEMVICDKCGQGYHQLCHTPH-IDSSVIDSDEKWLC 55

>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} Length = 71

 Score = 41.0 bits (96), Expect = 6e-05
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 547 IICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFER 589
           + C  CN  V       H EC  +  IP+G W C++C     R
Sbjct: 34  LFCDMCNLAV-------HQECYGVPYIPEGQWLCRHCLQSRAR 69

>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} Length = 71

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 10/53 (18%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCC 684
           C +C   +          IL CD C    H  C        +  +P+G+W C 
Sbjct: 19  CSICMDGE----SQNSNVILFCDMCNLAVHQECY------GVPYIPEGQWLCR 61

>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens} Length = 77

 Score = 41.0 bits (96), Expect = 9e-05
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 11/54 (20%)

Query: 631 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELP-KGKWFC 683
            C LC G         P   L+CD+C+  FH+ CL       L  +P + +W+C
Sbjct: 28  ACHLCGGRQ------DPDKQLMCDECDMAFHIYCLDPP----LSSVPSEDEWYC 71

>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens} Length = 226

 Score = 43.6 bits (102), Expect = 1e-04
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 9/67 (13%)

Query: 618 CIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELP 677
           C     ++      C  C  C   +    P   L+CD+C+  FH+ CL       L  +P
Sbjct: 161 CKHCKDDVNRLCRVCA-CHLCGGRQD---PDKQLMCDECDMAFHIYCLD----PPLSSVP 212

Query: 678 -KGKWFC 683
            + +W+C
Sbjct: 213 SEDEWYC 219

>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* Length = 75

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 11/57 (19%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 688
           C  C   D          ++ CD C+  +H  C+            + +WF C  C+
Sbjct: 21  CPGCNKPDDG------SPMIGCDDCDDWYHWPCVG----IMAAPPEEMQWF-CPKCA 66

>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A Length = 129

 Score = 41.3 bits (96), Expect = 2e-04
 Identities = 24/172 (13%), Positives = 45/172 (26%), Gaps = 50/172 (29%)

Query: 540 GYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANA 599
              +   + C  C  +V+  Q ++     SL         CK C   +      +     
Sbjct: 2   PLGSMGIVSCTACGQQVNHFQKDSIYRHPSL-----QVLICKNCFKYYMSDDISRDS--- 53

Query: 600 VEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCERE 659
                    D +++                  C  C              ++ CD C   
Sbjct: 54  ---------DGMDEQ-----------------CRWCAEG---------GNLICCDFCHNA 78

Query: 660 FHVGCLKKHKM---ADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEF 708
           F   C+ ++              +W+C + C      L + LV     + E 
Sbjct: 79  FCKKCILRNLGRRELSTIMDENNQWYCYI-CH--PEPLLD-LVTACNSVYEN 126

>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus} Length = 62

 Score = 38.3 bits (89), Expect = 5e-04
 Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 9/61 (14%)

Query: 524 DGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYC 583
           D  E  Y  C Q        G  I C      +    F  H  C SL+  P+G WYC  C
Sbjct: 7   DPNEPTYCLCNQ-----VSYGEMIGCDNEQCPIE--WF--HFSCVSLTYKPKGKWYCPKC 57

Query: 584 Q 584
           +
Sbjct: 58  R 58

>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A* Length = 90

 Score = 39.4 bits (91), Expect = 5e-04
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 16/62 (25%)

Query: 634 LCRGCDFSKSGFGPRTILLCD--QCERE-FHVGCLKKHKMADLRELPKGKWFCCMDCSRI 690
            CR   +         ++ CD   C  E FH GC+       L++ PKGKW+C  DC  I
Sbjct: 30  FCRNVSYG-------PMVACDNPACPFEWFHYGCVG------LKQAPKGKWYCSKDCKEI 76

Query: 691 NS 692
            +
Sbjct: 77  AN 78

>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens} Length = 189

 Score = 41.0 bits (95), Expect = 7e-04
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 10/52 (19%)

Query: 634 LCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCM 685
           +CR C        P  +++C+QCE  FH+ C     +  L+++P  +W C +
Sbjct: 4   ICRVCQ------KPGDLVMCNQCEFCFHLDCH----LPALQDVPGEEWSCSL 45

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	920
d1ygha_	164	d.108.1.1 (A:) Catalytic domain of GCN5 histone ac	7e-15
d1qsra_	162	d.108.1.1 (A:) Catalytic domain of GCN5 histone ac	1e-09
d1f62a_	51	g.50.1.2 (A:) Williams-Beuren syndrome transcripti	8e-07
d1fp0a1	70	g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-	2e-06
d1weva_	88	g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus mu	2e-06
d1mm2a_	61	g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens	2e-05
d1wema_	76	g.50.1.2 (A:) Death associated transcription facto	1e-04
d1weea_	72	g.50.1.2 (A:) PHD finger protein At1g33420 {Thale	0.002
d1we9a_	64	g.50.1.2 (A:) PHD finger protein At5g26210 {Thale	0.003

>d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 164

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.9 bits (173), Expect = 7e-15
 Identities = 31/154 (20%), Positives = 56/154 (36%), Gaps = 14/154 (9%)

Query: 729 VRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGM 788
           + +R+++    T E  ++L+    IF             ++ I  +VY R+        +
Sbjct: 2   IEFRVVNNDN-TKENMMVLTGLKNIFQKQL-----PKMPKEYIARLVYDRS-------HL 48

Query: 789 YCAILTVNSSVVSAGILRVF-GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVK 847
             A++    +VV     R F  +E AE+   A S     +GY   L   ++  +      
Sbjct: 49  SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNI 108

Query: 848 SIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKR 881
              L  A+     +  K GF K      SI+   
Sbjct: 109 KYFLTYADNYAIGYFKKQGFTKEITLDKSIWMGY 142

>d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Tetrahymena thermophila [TaxId: 5911]

 Score = 56.3 bits (135), Expect = 1e-09
 Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 15/154 (9%)

Query: 729 VRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGM 788
           + + +L     T     LL     IF             ++ I  +V+ R+         
Sbjct: 1   LDFDIL-TNDGTHRNMKLLIDLKNIFSRQL-----PKMPKEYIVKLVFDRH-------HE 47

Query: 789 YCAILTVNSSVVSAGILRVF-GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVK 847
              IL     V+     R +  Q  AE+  +A +     +GY   L    +  +    ++
Sbjct: 48  SMVILKNKQKVIGGICFRQYKPQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIE 107

Query: 848 SIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKR 881
            ++  A   A   +  K GF K        ++  
Sbjct: 108 YLLTYADNFAIG-YFKKQGFTKEHRMPQEKWKGY 140

>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Williams-Beuren syndrome transcription factor, WSTF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 8e-07
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 12/59 (20%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCS 688
           C +CR             ++LCD+C + FH+ CL+      L E+P G+W C  C   +
Sbjct: 3   CKVCRKKG------EDDKLILCDECNKAFHLFCLRP----ALYEVPDGEWQCPACQPAT 51

>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Length = 70

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Nuclear corepressor KAP-1 (TIF-1beta)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 12/58 (20%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDC 687
             +CR C        P  +++C+QCE  FH+ C        L+++P  +W C  C   
Sbjct: 7   ATICRVCQ------KPGDLVMCNQCEFCFHLDCHLP----ALQDVPGEEWSCSLCHVL 54

>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein 22
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.8 bits (105), Expect = 2e-06
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 689
           C++CR    +        ++ C +C   +H  C K          P+  W+ C  C+R
Sbjct: 19  CVVCRQMTVASGNQ----LVECQECHNLYHQDCHKPQVTDKEVNDPRLVWY-CARCTR 71

>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Length = 61

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Mi2-beta (CHD4)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 10/52 (19%)

Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 683
              CR C           +L CD C   +H+ CL       L E+P G+W C
Sbjct: 9   MEFCRVCK------DGGELLCCDTCPSSYHIHCLNPP----LPEIPNGEWLC 50

>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 76

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Death associated transcription factor 1, Datf1 (DIO-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 8/56 (14%)

Query: 634 LCRGCDFSKSGFGPRTILLCDQCEREFHVGCLK-KHKMADLRELPKGKWFCCMDCS 688
           +CR    +      R ++ CD+CE  FH  C+        L E     + C  +C+
Sbjct: 20  ICRQPHNN------RFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICP-NCT 68

>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 72

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein At1g33420
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 10/50 (20%), Positives = 15/50 (30%), Gaps = 9/50 (18%)

Query: 634 LCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 683
            C   D          +L CD C    H  C+      +  +    K+ C
Sbjct: 20  KCGTKDD-----DGERMLACDGCGVWHHTRCIGI----NNADALPSKFLC 60

>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein At5g26210
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 6/55 (10%)

Query: 635 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 689
           C  C   +S       + CD CE  FH  C+   K+   R     ++ C   CS 
Sbjct: 9   CGAC--GESYAADEFWICCDLCEMWFHGKCV---KITPARAEHIKQYKCP-SCSN 57

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	920
d1z4ra1	162	Catalytic domain of GCN5 histone acetyltransferase	99.66
d1qsra_	162	Catalytic domain of GCN5 histone acetyltransferase	99.58
d1ygha_	164	Catalytic domain of GCN5 histone acetyltransferase	99.56
d1q2ya_	140	Probable acetyltransferase YjcF {Bacillus subtilis	99.17
d2jdca1	145	Probable acetyltransferase YitI {Bacillus lichenif	99.16
d2atra1	137	Probable acetyltransferase SP0256 {Streptococcus p	99.0
d1y7ra1	133	Hypothetical protein SA2161 {Staphylococcus aureus	99.0
d1y9ka1	152	IAA acetyltransferase {Bacillus cereus [TaxId: 139	98.98
d1yvka1	152	Hypothetical protein YvbK (BSu33890) {Bacillus sub	98.94
d1yx0a1	151	Hypothetical protein YsnE {Bacillus subtilis [TaxI	98.92
d1y9wa1	140	Probable acetyltransferase BC2806 {Bacillus cereus	98.92
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	98.88
d1n71a_	180	Aminoglycoside 6'-N-acetyltransferase {Enterococcu	98.87
d2fiwa1	156	Probable N-acetyltransferase RPA1999 {Rhodopseudom	98.83
d1ghea_	170	Tabtoxin resistance protein {Pseudomonas syringae	98.8
d1xeba_	149	Hypothetical protein PA0115 {Pseudomonas aeruginos	98.8
d1u6ma_	189	Putative acetyltransferase EF0945 {Enterococcus fa	98.77
d1i12a_	157	Glucosamine-phosphate N-acetyltransferase GNA1 {Ba	98.76
d2fe7a1	156	Probable N-acetyltransferase PA0478 {Pseudomonas a	98.74
d2gana1	182	Hypothetical protein PH0736 {Pyrococcus horikoshii	98.69
d1vkca_	149	Putative acetyltransferase PF0028 {Pyrococcus furi	98.66
d1tiqa_	173	Protease synthase and sporulation negative regulat	98.65
d1s3za_	147	Aminoglycoside N-acetyltransferase AAC(6')-IY {Sal	98.64
d2fiaa1	157	Probable acetyltransferase EF1919 {Enterococcus fa	98.62
d2fl4a1	146	Probable spermine/spermidine acetyltransferase EF1	98.58
d2ozga2	283	Putative acetyltransferase Ava4977 {Anabaena varia	98.58
d1mk4a_	157	Hypothetical protein YqiY {Bacillus subtilis [TaxI	98.55
d1z4ea1	150	Transcriptional regulator BH1968 {Bacillus halodur	98.54
d2i00a2	291	Putative acetyltransferase EF2353 {Enterococcus fa	98.52
d2hv2a2	285	Hypothetical protein EF1021 {Enterococcus faecalis	98.5
d1cjwa_	166	Serotonin N-acetyltranferase {Sheep (Ovis aries) [	98.47
d1yr0a1	163	Phosphinothricin acetyltransferase {Agrobacterium	98.46
d1ufha_	155	Putative acetyltransferase YycN {Bacillus subtilis	98.46
d1fp0a1	70	Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo	98.44
d2cy2a1	174	Probable acetyltransferase TTHA1209 {Thermus therm	98.43
d1m4ia_	181	Aminoglycoside 2'-N-acetyltransferase {Mycobacteri	98.42
d1vhsa_	165	Putative phosphinothricin acetyltransferase YwnH {	98.41
d1yvoa1	169	Hypothetical protein PA4866 {Pseudomonas aeruginos	98.41
d1wwza1	157	Hypothetical protein PH1933 {Pyrococcus horikoshii	98.38
d1bo4a_	137	Aminoglycoside 3-N-acetyltransferase {Serratia mar	98.35
d2ae6a1	161	Putative acetyltransferase EF0244 {Enterococcus fa	98.34
d1f62a_	51	Williams-Beuren syndrome transcription factor, WST	98.33
d1p0ha_	308	Mycothiol synthase MshD {Mycobacterium tuberculosi	98.31
d1mm2a_	61	Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606	98.3
d2euia1	153	Probable acetyltransferase PA4026 {Pseudomonas aer	98.3
d2i6ca1	160	Putative acetyltransferase PA4794 {Pseudomonas aer	98.27
d2b5ga1	167	Diamine acetyltransferase 1 {Human (Homo sapiens)	98.24
d2beia1	167	Diamine acetyltransferase 2 {Human (Homo sapiens)	98.16
d2aj6a1	118	Hypothetical protein MW0638 {Staphylococcus aureus	98.12
d1sqha_	297	Hypothetical protein cg14615-pa {Fruit fly (Drosop	98.1
d1qsma_	150	Histone acetyltransferase HPA2 {Baker's yeast (Sac	98.1
d2ge3a1	164	Probable acetyltransferase Atu2290 {Agrobacterium	98.09
d1r57a_	102	Hypothetical protein SA2309 {Staphylococcus aureus	98.08
d1weva_	88	PHD finger protein 22 {Mouse (Mus musculus) [TaxId	98.04
d1yrea1	183	Hypothetical protein PA3270 {Pseudomonas aeruginos	97.46
d1wesa_	71	PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu	97.45
d1nsla_	180	Probable acetyltransferase YdaF {Bacillus subtilis	97.4
d1weea_	72	PHD finger protein At1g33420 {Thale cress (Arabido	97.39
d1s7ka1	174	L7/L12-Ribosomal-protein-serine acetyltransferase	97.35
d1p0ha_	308	Mycothiol synthase MshD {Mycobacterium tuberculosi	97.19
d1ro5a_	197	Autoinducer synthesis protein LasI {Pseudomonas ae	97.05
d2fcka1	178	Putative ribosomal-protein-serine acetyltransferas	97.01
d1wesa_	71	PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu	96.82
d2pnxa1	51	Inhibitor of growth protein 4, Ing4 {Homo sapiens	96.8
d1fp0a1	70	Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo	96.75
d1yk3a1	198	Hypothetical protein Rv1347c/MT1389 {Mycobacterium	96.75
d1we9a_	64	PHD finger protein At5g26210 {Thale cress (Arabido	96.73
d1mm2a_	61	Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606	96.57
d1wema_	76	Death associated transcription factor 1, Datf1 (DI	96.39
d1wepa_	79	PHD finger protein 8 {Mouse (Mus musculus) [TaxId:	96.31
d1f62a_	51	Williams-Beuren syndrome transcription factor, WST	96.12
d2pnxa1	51	Inhibitor of growth protein 4, Ing4 {Homo sapiens	96.0
d2fsra1	164	Probable acetyltranferase Atu2435 {Agrobacterium t	95.86
d1weva_	88	PHD finger protein 22 {Mouse (Mus musculus) [TaxId	95.29
d1wewa_	78	Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop	95.01
d1weea_	72	PHD finger protein At1g33420 {Thale cress (Arabido	92.08
d1kzfa_	210	Acyl-homoserinelactone synthase EsaI {Pantoea stew	90.19
d1ufna_	94	Putative nuclear protein homolog 5830484a20rik {Mo	90.02
d1wila_	89	Hypothetical protein KIAA1045 {Human (Homo sapiens	87.94
d1wewa_	78	Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop	86.68
d1we9a_	64	PHD finger protein At5g26210 {Thale cress (Arabido	86.05

>d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=4.2e-15  Score=115.26  Aligned_cols=154  Identities=16%  Similarity=0.201  Sum_probs=119.3

Q ss_pred             EEEECCCC---CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEEE
Q ss_conf             38993589---899877898999999972406863125857782001010446897321761999994489699999997
Q 002450          730 RWRLLSGK---AATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILR  806 (920)
Q Consensus       730 ~W~LL~gk---~~~~e~~s~La~AL~I~~EcF~Pivd~rTgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAslr  806 (920)
                      ..++++-+   ..+.+....|..+.+||...|..     ..+|.|..++|..+.        .+.++..++++|++++++
T Consensus         4 ~~~~~~n~~~~~~~~~~~~~L~~~~~iF~~~lp~-----m~~~yi~r~~~d~~~--------~~~v~~~~~~iIG~i~~~   70 (162)
T d1z4ra1           4 EFHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPR-----MPKEYIARLVFDPKH--------KTLALIKDGRVIGGICFR   70 (162)
T ss_dssp             EEEEECCSSCTTSCHHHHHHHHHHHHHHHHHCTT-----SCHHHHHHHHTCTTC--------EEEEEEETTEEEEEEEEE
T ss_pred             EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHCCCCC--------EEEEEEECCEEEEEEEEE
T ss_conf             9999647778765888999999989999876789-----739999999659884--------699999999999999999


Q ss_pred             EE-CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCE
Q ss_conf             74-78146753334204855779159999999998321491199983813259997833694882967899998717540
Q 002450          807 VF-GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQL  885 (920)
Q Consensus       807 I~-G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~~el~~~~~~~~~~  885 (920)
                      ++ +.+.|||..+||+++|||||+|+.||..+++.++..|+.++++.|...|.++|.+ +||++....... .|..  -+
T Consensus        71 ~~~~~~~aeI~~laV~~~~qgkGiG~~Lm~~l~~~~~~~g~~~i~~~~~~~A~~fY~k-~GF~~~~~~~~~-~~~~--~i  146 (162)
T d1z4ra1          71 MFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKK-QGFSKDIKVPKS-RYLG--YI  146 (162)
T ss_dssp             EETTTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHH-TTEESCCCSCHH-HHTT--TS
T ss_pred             EECCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH-CCCEEECCCCHH-HHCC--CC
T ss_conf             9788998999999998036552589999999999998779869999258416778985-798672337666-7628--76


Q ss_pred             EEECCCCEEEECCCC
Q ss_conf             233486102311247
Q 002450          886 VTFKGTSMLQKRVPA  900 (920)
Q Consensus       886 ~~F~Gts~LqK~L~~  900 (920)
                      -.+.|.++|+=.|-+
T Consensus       147 kdy~~~~lm~~~~~p  161 (162)
T d1z4ra1         147 KDYEGATLMECELNP  161 (162)
T ss_dssp             CCCTTCEEEEEECCC
T ss_pred             CCCCCEEEEEEECCC
T ss_conf             688983999986479

>d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Tetrahymena thermophila [TaxId: 5911]

Probab=99.58  E-value=3.7e-14  Score=109.01  Aligned_cols=155  Identities=18%  Similarity=0.243  Sum_probs=117.7

Q ss_pred             CEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEEEEE
Q ss_conf             23899358989987789899999997240686312585778200101044689732176199999448969999999774
Q 002450          729 VRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVF  808 (920)
Q Consensus       729 ~~W~LL~gk~~~~e~~s~La~AL~I~~EcF~Pivd~rTgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAslrI~  808 (920)
                      +.|+++.-+ ..+|....|....+||.+-+ |    ....+.+..+++..       ...+.+|++.+++||++++++++
T Consensus         1 ~~~r~i~~~-d~~e~~~lL~~l~~if~~~l-p----~~~~~y~~r~i~d~-------~~~~~~v~~~~g~iVG~~~~~~~   67 (162)
T d1qsra_           1 LDFDILTND-GTHRNMKLLIDLKNIFSRQL-P----KMPKEYIVKLVFDR-------HHESMVILKNKQKVIGGICFRQY   67 (162)
T ss_dssp             CEEEEECCC-SCHHHHHHHHHHHHHHHHHC-T----TSCHHHHHHHHTST-------TEEEEEEEETTTEEEEEEEEEEE
T ss_pred             CEEEEECCC-CCHHHHHHHHHHHHHHHHHC-C----CCCHHHHHHHHHCC-------CCCEEEEEEECCEEEEEEEEEEE
T ss_conf             989996389-98899999999999998777-8----98778999985385-------77679999979989999999997


Q ss_pred             -CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCEEE
Q ss_conf             -7814675333420485577915999999999832149119998381325999783369488296789999871754023
Q 002450          809 -GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVT  887 (920)
Q Consensus       809 -G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~~el~~~~~~~~~~~~  887 (920)
                       ..+.||+..+|+.++|||||+|++||..+++.++..|+..+++.|...+.+||.+ +||++...... ..|.....  .
T Consensus        68 ~~~~~~ei~~laV~p~~rg~GiG~~Ll~~l~~~a~~~g~~~i~l~~~~~a~~fY~k-~GF~~~~~~~~-~~~~~~~k--~  143 (162)
T d1qsra_          68 KPQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKK-QGFTKEHRMPQ-EKWKGYIK--D  143 (162)
T ss_dssp             TTTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTHHHHHH-TTCBSSCSSCH-HHHBTTBC--C
T ss_pred             CCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-CCCEEECCCCH-HHHCCCCC--C
T ss_conf             88999999999995778267268999999999998689829998547730779996-79956145776-67507535--7


Q ss_pred             ECCCCEEEECCCC
Q ss_conf             3486102311247
Q 002450          888 FKGTSMLQKRVPA  900 (920)
Q Consensus       888 F~Gts~LqK~L~~  900 (920)
                      ..|...|+..|.+
T Consensus       144 y~~~~~M~~~l~~  156 (162)
T d1qsra_         144 YDGGTLMECYIHP  156 (162)
T ss_dssp             CTTSEEEEEECCT
T ss_pred             CCCEEEEEEECCC
T ss_conf             7870999972688

>d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.56  E-value=7.1e-14  Score=107.13  Aligned_cols=155  Identities=21%  Similarity=0.296  Sum_probs=120.8

Q ss_pred             CEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEEEEE
Q ss_conf             23899358989987789899999997240686312585778200101044689732176199999448969999999774
Q 002450          729 VRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVF  808 (920)
Q Consensus       729 ~~W~LL~gk~~~~e~~s~La~AL~I~~EcF~Pivd~rTgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAslrI~  808 (920)
                      +.|++++ ...++|....|....+||.+-+     |...+|.|..++|..+       ....+|++.+++|||+++++++
T Consensus         2 ~~~r~i~-~~~~~e~~~~L~~~~~if~~~l-----p~~~~~~i~r~~~d~~-------~~~~~v~~~~~~iVG~~~~~~~   68 (164)
T d1ygha_           2 IEFRVVN-NDNTKENMMVLTGLKNIFQKQL-----PKMPKEYIARLVYDRS-------HLSMAVIRKPLTVVGGITYRPF   68 (164)
T ss_dssp             EEEEEEC-CSSCHHHHHHHHHHHHHHHHHC-----TTSCHHHHHHHHHCTT-------CEEEEEEETTTEEEEEEEEEEE
T ss_pred             EEEEEEC-CCCCHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHHCCC-------CCEEEEEEECCEEEEEEEEEEC
T ss_conf             6999975-8998789999999999999876-----8862889999973657-------8639999849949999999961


Q ss_pred             C-CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC-CCEEEECCHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCEE
Q ss_conf             7-814675333420485577915999999999832149-11999838132599978336948829678999987175402
Q 002450          809 G-QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLR-VKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLV  886 (920)
Q Consensus       809 G-~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~Lg-Ve~LvlpA~~ea~~~Wt~kFGF~~i~~~el~~~~~~~~~~~  886 (920)
                      . .+.|||..+|+.++|||||+|+.||..+++.++..+ +..++..+...|..+|.+ +||......+... |..  -..
T Consensus        69 ~~~~~aeI~~laV~p~~rg~GiG~~L~~~l~~~~k~~~~~~~~~~~~n~~A~~fY~k-~GF~~~~~~~~~~-~~g--y~k  144 (164)
T d1ygha_          69 DKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKK-QGFTKEITLDKSI-WMG--YIK  144 (164)
T ss_dssp             GGGTEEEEEEEEECTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHH-TTCBSSCCSCHHH-HBT--TBC
T ss_pred             CCCCEEEEEEEEECCHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHH-CCCEEECCCCHHH-HCC--CCC
T ss_conf             899889999999870022378999999999999975276478999567889999985-4988802364454-368--646


Q ss_pred             EECCCCEEEECCCC
Q ss_conf             33486102311247
Q 002450          887 TFKGTSMLQKRVPA  900 (920)
Q Consensus       887 ~F~Gts~LqK~L~~  900 (920)
                      .+.+++.|+..|.+
T Consensus       145 d~e~~ilM~~~l~p  158 (164)
T d1ygha_         145 DYEGGTLMQCSMLP  158 (164)
T ss_dssp             CTTCCEEEEEECCC
T ss_pred             CCCCEEEEEEECCC
T ss_conf             99984999977689

>d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase YjcF
species: Bacillus subtilis [TaxId: 1423]

Probab=99.17  E-value=9.5e-11  Score=86.42  Aligned_cols=90  Identities=16%  Similarity=0.177  Sum_probs=78.0

Q ss_pred             CCEECCEEEEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH
Q ss_conf             73217619999944896999999977478146753334204855779159999999998321491199983813259997
Q 002450          782 GQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIW  861 (920)
Q Consensus       782 r~~f~GfY~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~W  861 (920)
                      ..|-..+| +|+..++++|+++.++..+ +.++|..+||.++|||||+|+.|+.++++.++..|+++++|.|...+++||
T Consensus        37 ~~D~~~~h-~v~~~~~~~vg~~~~~~~~-~~~~i~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~a~~~a~~fY  114 (140)
T d1q2ya_          37 ELENESEH-IVVYDGEKPVGAGRWRMKD-GYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGASGFILNAQTQAVPFY  114 (140)
T ss_dssp             TTGGGSEE-EEEEETTEEEEEEEEEEET-TEEEEEEEECCGGGTTTTHHHHHHHHHHHHHHHTTCCSEEEEEEGGGHHHH
T ss_pred             CCCCCCEE-EEEECCCCEEEEEEEECCC-CEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
T ss_conf             77755689-9973456478998641444-101673369814351871899999999999998699853876779999999


Q ss_pred             HHCCCCEECCHHH
Q ss_conf             8336948829678
Q 002450          862 TDKFGFKKIDPEL  874 (920)
Q Consensus       862 t~kFGF~~i~~~e  874 (920)
                      .+ +||+.+++.+
T Consensus       115 ~k-~GF~~~~~~~  126 (140)
T d1q2ya_         115 KK-HGYRVLSEKE  126 (140)
T ss_dssp             HH-TTCEESCSCC
T ss_pred             HH-CCCEECCCEE
T ss_conf             98-8697948740

>d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase YitI
species: Bacillus licheniformis [TaxId: 1402]

Probab=99.16  E-value=2.1e-10  Score=84.11  Aligned_cols=82  Identities=16%  Similarity=0.062  Sum_probs=73.3

Q ss_pred             EEEEECCEEEEEEEEEEE------CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHC
Q ss_conf             999448969999999774------78146753334204855779159999999998321491199983813259997833
Q 002450          791 AILTVNSSVVSAGILRVF------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDK  864 (920)
Q Consensus       791 ~VLe~~~~iVsaAslrI~------G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~k  864 (920)
                      .+...++++|+++++...      +...+++..++|.++|||||+|+.||..+++.++..|++.+++.|...|..||.+ 
T Consensus        41 ~~a~~~~~iVg~~~~~~~~~~~~~~~~~~~l~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~a~~~A~~fY~k-  119 (145)
T d2jdca1          41 LGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKK-  119 (145)
T ss_dssp             EEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHH-
T ss_pred             EEEEECCEEEEEEEEEECCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH-
T ss_conf             9998699899999997302356688986999999996899541699999999999999839979999665307889998-


Q ss_pred             CCCEECCHH
Q ss_conf             694882967
Q 002450          865 FGFKKIDPE  873 (920)
Q Consensus       865 FGF~~i~~~  873 (920)
                      +||..+++.
T Consensus       120 ~GF~~~g~~  128 (145)
T d2jdca1         120 LGFSEQGEV  128 (145)
T ss_dssp             TTCEEEEEE
T ss_pred             CCCEEECCE
T ss_conf             899896958

>d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase SP0256
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.00  E-value=1.1e-09  Score=79.34  Aligned_cols=116  Identities=9%  Similarity=-0.008  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCC
Q ss_conf             99999997240686312585778200101044689732176199999448969999999774781467533342048557
Q 002450          747 LSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHG  826 (920)
Q Consensus       747 La~AL~I~~EcF~Pivd~rTgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrr  826 (920)
                      +...+.++.+.|-+-..  ...+.+..+..+.         .+..++..++++|+.+.+...+...|.+--++|.++|||
T Consensus        12 ~~ei~~l~~~~~~~~~~--~~~~~l~~~~~~~---------~~~~~~~~~~~ivG~~~~~~~~~~~~~i~~l~V~~~~rg   80 (137)
T d2atra1          12 LEDVLHLYQAVGWTNYT--HQTEMLEQALSHS---------LVIYLALDGDAVVGLIRLVGDGFSSVFVQDLIVLPSYQR   80 (137)
T ss_dssp             HHHHHHHHHTTCCCC-------CHHHHHHTSC---------SEEEEEEETTEEEEEEEEEECSSSEEEEEEEEECTTSCS
T ss_pred             HHHHHHHHHHCCCCCCC--CCHHHHHHHHHCC---------CEEEEEEECCEEEEEEEEECCCCCEEEEEEEEEEHHHCC
T ss_conf             99999999976999877--9999999997579---------399999979999999999815784399978999879838


Q ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCEECCHHH
Q ss_conf             791599999999983214911999838132599978336948829678
Q 002450          827 KGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPEL  874 (920)
Q Consensus       827 qG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~~e  874 (920)
                      +|+|+.||..+++.+...|+..+++.+.+.+..+|.+ +||+.+++..
T Consensus        81 ~GiG~~Ll~~~~~~~~~~~~~~i~l~~~~~a~~fY~k-~GF~~~~~~~  127 (137)
T d2atra1          81 QGIGSSLMKEALGNFKEAYQVQLATEETEKNVGFYRS-MGFEILSTYD  127 (137)
T ss_dssp             SSHHHHHHHHHHGGGTTCSEEECCCCCCHHHHHHHHH-TTCCCGGGGT
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHH-CCCEECCCCC
T ss_conf             6699999999999999779839999306877999996-8999976489

>d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein SA2161
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.00  E-value=1.4e-09  Score=78.75  Aligned_cols=85  Identities=24%  Similarity=0.375  Sum_probs=73.8

Q ss_pred             EEEEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE--ECCHHHHHHHHHHCC
Q ss_conf             199999448969999999774781467533342048557791599999999983214911999--838132599978336
Q 002450          788 MYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIV--LPAAEEAESIWTDKF  865 (920)
Q Consensus       788 fY~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~Lv--lpA~~ea~~~Wt~kF  865 (920)
                      .+.+++..++++|+.+.+...+...++|-.++++++|||||+|++|+..+++.++..|+++++  +.+...+..+|.+ +
T Consensus        39 ~~~~~~~~~~~~vG~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g~~~~~l~~~a~~~a~~fY~k-~  117 (133)
T d1y7ra1          39 LFTVTLYDKDRLIGMGRVIGDGGTVFQIVDIAVLKSYQGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVK-F  117 (133)
T ss_dssp             SEEEEEEETTEEEEEEEEEECSSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHCCTTCEEEEEEETTHHHHHHT-T
T ss_pred             EEEEEEEECCEEEEEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH-C
T ss_conf             599999999999999999962588999988999651053489999999999999986997899998488489999998-8


Q ss_pred             CCEECCHH
Q ss_conf             94882967
Q 002450          866 GFKKIDPE  873 (920)
Q Consensus       866 GF~~i~~~  873 (920)
                      ||.+.++.
T Consensus       118 GF~~~~~~  125 (133)
T d1y7ra1         118 GFMPTEPD  125 (133)
T ss_dssp             TCEECTTT
T ss_pred             CCEEECCC
T ss_conf             79990799

>d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: IAA acetyltransferase
species: Bacillus cereus [TaxId: 1396]

Probab=98.98  E-value=2.9e-09  Score=76.56  Aligned_cols=100  Identities=12%  Similarity=0.124  Sum_probs=80.9

Q ss_pred             EEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH---HHHHHHHHCCC
Q ss_conf             999944896999999977478146753334204855779159999999998321491199983813---25999783369
Q 002450          790 CAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWTDKFG  866 (920)
Q Consensus       790 ~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~Wt~kFG  866 (920)
                      +.|++.++++|+++.+...+.+.+||..+||.++|||||+|+.|+..+++.++..|++.+.+.+..   .+..+|.+ +|
T Consensus        37 ~~v~~~~g~ivG~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~t~~~n~~a~~fY~k-~G  115 (152)
T d1y9ka1          37 TYVAKQGGSVIGVYVLLETRPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQK-CG  115 (152)
T ss_dssp             EEEEECSSSEEEEEEEEECSTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH-TT
T ss_pred             EEEEEECCEEEEEEEEEECCCCEEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH-CC
T ss_conf             99999999999999999937998999999983788799840479999999999869956899954687899999998-89


Q ss_pred             CEECCHHHHHHHHHHCCCEEEECCCC
Q ss_conf             48829678999987175402334861
Q 002450          867 FKKIDPELLSIYRKRCSQLVTFKGTS  892 (920)
Q Consensus       867 F~~i~~~el~~~~~~~~~~~~F~Gts  892 (920)
                      |+.++...  .|....+.-..|.+.+
T Consensus       116 F~~~~~~~--~~f~~~y~~~i~e~g~  139 (152)
T d1y9ka1         116 FRIFSIDF--DYFSKHYEEEIIENGI  139 (152)
T ss_dssp             CEEEEEET--THHHHHCSSCEEETTE
T ss_pred             CEEEEEEC--CCCCCCCCCCHHHCCC
T ss_conf             99995886--8454678762343796

>d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein YvbK (BSu33890)
species: Bacillus subtilis [TaxId: 1423]

Probab=98.94  E-value=5.4e-09  Score=74.79  Aligned_cols=100  Identities=13%  Similarity=0.125  Sum_probs=82.6

Q ss_pred             EEEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH---HHHHHHHHCC
Q ss_conf             9999944896999999977478146753334204855779159999999998321491199983813---2599978336
Q 002450          789 YCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWTDKF  865 (920)
Q Consensus       789 Y~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~Wt~kF  865 (920)
                      .++|+..++++||.+.+...+.+.+++..++|.++|||||+|+.|+..+++.+...|+.++++.+..   .+..+|.+ +
T Consensus        36 ~~~v~~~~g~ivG~~~~~~~~~~~~~l~~i~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~~~l~~~~~n~~a~~fYek-~  114 (152)
T d1yvka1          36 ECYTAWAGDELAGVYVLLKTRPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQK-C  114 (152)
T ss_dssp             EEEEEEETTEEEEEEEEEECSTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH-T
T ss_pred             EEEEEEECCEEEEEEEEEECCCCEEEEEEEEECHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHH-C
T ss_conf             399999999999999998457988999886457857389842277888888864200020101214587999999998-8


Q ss_pred             CCEECCHHHHHHHHHHCCCEEEECCC
Q ss_conf             94882967899998717540233486
Q 002450          866 GFKKIDPELLSIYRKRCSQLVTFKGT  891 (920)
Q Consensus       866 GF~~i~~~el~~~~~~~~~~~~F~Gt  891 (920)
                      ||...+...- -+... ....+|...
T Consensus       115 GF~~~~~~~~-~~~~~-~~~~~~e~g  138 (152)
T d1yvka1         115 GFRIQAIDHD-FFLRH-YDEDIFENG  138 (152)
T ss_dssp             TCEEEEEETT-HHHHS-CSSCEEETT
T ss_pred             CCEEEEEECC-CCCCC-CCCCCCCCC
T ss_conf             9999989937-32357-997510069

>d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein YsnE
species: Bacillus subtilis [TaxId: 1423]

Probab=98.92  E-value=3e-09  Score=76.43  Aligned_cols=81  Identities=19%  Similarity=0.231  Sum_probs=72.5

Q ss_pred             EEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC-----HHHHHHHHHHCC
Q ss_conf             999448969999999774781467533342048557791599999999983214911999838-----132599978336
Q 002450          791 AILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPA-----AEEAESIWTDKF  865 (920)
Q Consensus       791 ~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA-----~~ea~~~Wt~kF  865 (920)
                      ++.+.++++|+++.++....+.+||..++|.++|||||+|+.|+..+++.++..|.+.++|.+     -+.|..+|.+ +
T Consensus        49 ~va~~~~~~vG~~~~~~~~~~~~~i~~~~V~p~~Rg~Glg~~Ll~~~~~~A~~~g~~~i~L~t~~~~~n~~A~~lY~k-~  127 (151)
T d1yx0a1          49 WSAWEGDELAGCGALKELDTRHGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYES-F  127 (151)
T ss_dssp             EEEECSSSEEEEEEEEEEETTEEECCCCCCSTTTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHT-T
T ss_pred             EEEEECCEEEEEEEEEECCCCEEEEEEEEECHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH-C
T ss_conf             999999999999999841696599986002898996770489999999999977984999994456335999999998-6


Q ss_pred             CCEECCH
Q ss_conf             9488296
Q 002450          866 GFKKIDP  872 (920)
Q Consensus       866 GF~~i~~  872 (920)
                      ||..++.
T Consensus       128 GF~~~~~  134 (151)
T d1yx0a1         128 GFQYCEP  134 (151)
T ss_dssp             SEEECCC
T ss_pred             CCEECCC
T ss_conf             9999875

>d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase BC2806
species: Bacillus cereus [TaxId: 1396]

Probab=98.92  E-value=3.8e-09  Score=75.77  Aligned_cols=82  Identities=11%  Similarity=0.113  Sum_probs=72.8

Q ss_pred             EEEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCH-HHHHHHHHHCCCC
Q ss_conf             999994489699999997747814675333420485577915999999999832149119998381-3259997833694
Q 002450          789 YCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA-EEAESIWTDKFGF  867 (920)
Q Consensus       789 Y~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~-~ea~~~Wt~kFGF  867 (920)
                      ..+|.+.++++|+.+.++..+ +.+++-.+++.++|||||+|+.|+.++++.+...|++++++.+. +.|..+|.+ +||
T Consensus        41 ~~~v~~~~~~ivG~~~~~~~~-~~~~i~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~A~~fY~k-~GF  118 (140)
T d1y9wa1          41 SLVVKNEEGKIFGGVTGTMYF-YHLHIDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKK-HGY  118 (140)
T ss_dssp             EEEEECTTCCEEEEEEEEEET-TEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHH-TTC
T ss_pred             EEEEEECCCCEEEEEEEEEEC-CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHH-CCC
T ss_conf             999996799599999999844-726999999981026998189999999999996114089876021558999982-999


Q ss_pred             EECCH
Q ss_conf             88296
Q 002450          868 KKIDP  872 (920)
Q Consensus       868 ~~i~~  872 (920)
                      ..++.
T Consensus       119 ~~~g~  123 (140)
T d1y9wa1         119 REYGV  123 (140)
T ss_dssp             EEEEE
T ss_pred             EEEEE
T ss_conf             99999

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.88  E-value=1.7e-08  Score=71.46  Aligned_cols=85  Identities=16%  Similarity=0.144  Sum_probs=73.6

Q ss_pred             CEEEEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCH-HHHHHHHHHCC
Q ss_conf             61999994489699999997747814675333420485577915999999999832149119998381-32599978336
Q 002450          787 GMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA-EEAESIWTDKF  865 (920)
Q Consensus       787 GfY~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~-~ea~~~Wt~kF  865 (920)
                      .+..++...++++|+.+..++++ +.++|..+++.++|||||+|+.|+..++..+...|+.++++.+. +.+..||.+ +
T Consensus        36 ~~~~~v~d~~g~ivG~~~~~~~~-~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~a~~fY~k-~  113 (137)
T d2g3aa1          36 DLNITIRNDDNSVTGGLVGHTAR-GWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYER-Y  113 (137)
T ss_dssp             EEEEEEECTTCCEEEEEEEEEET-TEEEEEEEECCGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHH-H
T ss_pred             CEEEEEEECCCCEEEEEEEEEEC-CEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH-C
T ss_conf             26999995799899999999968-937998999994345998299999999999998699347886153766999984-9


Q ss_pred             CCEECCHH
Q ss_conf             94882967
Q 002450          866 GFKKIDPE  873 (920)
Q Consensus       866 GF~~i~~~  873 (920)
                      ||+.++..
T Consensus       114 GF~~~g~~  121 (137)
T d2g3aa1         114 GFTKIGSL  121 (137)
T ss_dssp             TCEEEEEE
T ss_pred             CCEEEEEE
T ss_conf             99999988

>d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside 6'-N-acetyltransferase
species: Enterococcus faecium [TaxId: 1352]

Probab=98.87  E-value=1.4e-08  Score=72.02  Aligned_cols=103  Identities=14%  Similarity=0.018  Sum_probs=78.4

Q ss_pred             EEEEEEECCEEEEEEEEE-EECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCH-------------
Q ss_conf             999994489699999997-747814675333420485577915999999999832149119998381-------------
Q 002450          789 YCAILTVNSSVVSAGILR-VFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA-------------  854 (920)
Q Consensus       789 Y~~VLe~~~~iVsaAslr-I~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~-------------  854 (920)
                      +.++...++++|+.+.++ .++...+||-.++++++|||||+|+.|+..+++.++..|+++++|-+.             
T Consensus        46 ~~~va~~~~~iig~~~~~~~~~~~~~~I~~i~V~p~~rg~GiG~~Ll~~~~~~a~~~G~~~i~L~t~~~~~~~~~~~~~~  125 (180)
T d1n71a_          46 IAVAAVDQDELVGFIGAIPQYGITGWELHPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDL  125 (180)
T ss_dssp             EEEEEEETTEEEEEEEEEEEETTTEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCT
T ss_pred             EEEEEEECCEEEEEEEEEEECCCCEEEEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHC
T ss_conf             89999999968788888972699889999999836772168999999999999998799799998257434220233320


Q ss_pred             ---------------HHHHHHHHHCCCCEECCHHHHHHHHHHCCCEEEECCCCEEEECCCC
Q ss_conf             ---------------3259997833694882967899998717540233486102311247
Q 002450          855 ---------------EEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPA  900 (920)
Q Consensus       855 ---------------~ea~~~Wt~kFGF~~i~~~el~~~~~~~~~~~~F~Gts~LqK~L~~  900 (920)
                                     ..+..||.+ +||..++...  .+...      ......|.|.|.+
T Consensus       126 ~~~~~~~~~~~~~~n~~a~~fY~k-~Gf~~~g~~~--~~~g~------~~~~~~m~k~l~~  177 (180)
T d1n71a_         126 YEHTFDKVASIQNLREHPYEFYEK-LGYKIVGVLP--NANGW------DKPDIWMAKTIIP  177 (180)
T ss_dssp             TSSHHHHHHTCCBSSCCTHHHHHH-TTCEEEEEET--TTTST------TCCEEEEEEECSC
T ss_pred             CCCCCCCCCHHCCCCHHHHHHHHH-CCCEEEEEEC--CCCCC------CCCCEEEEEECCC
T ss_conf             122110000000152879999997-7998986666--77889------9974999986579

>d2fiwa1 d.108.1.1 (A:2-157) Probable N-acetyltransferase RPA1999 {Rhodopseudomonas palustris [TaxId: 1076]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable N-acetyltransferase RPA1999
species: Rhodopseudomonas palustris [TaxId: 1076]

Probab=98.83  E-value=7.9e-09  Score=73.68  Aligned_cols=84  Identities=15%  Similarity=0.160  Sum_probs=72.2

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCC
Q ss_conf             76199999448969999999774781467533342048557791599999999983214911999838132599978336
Q 002450          786 GGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKF  865 (920)
Q Consensus       786 ~GfY~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kF  865 (920)
                      .+.++.|.+.++++|+.+.+.-.    .+|..++|+++|||||+|++||..+++.+...|+..|.+.+-..+.++|.+ +
T Consensus        56 ~~~~~~va~~~~~ivG~~~~~~~----~~i~~l~V~p~~~g~GiG~~Ll~~~~~~a~~~g~~~l~~~~~~~A~~fY~k-~  130 (156)
T d2fiwa1          56 SGQLTLIATLQGVPVGFASLKGP----DHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAK-R  130 (156)
T ss_dssp             HTSEEEEEEETTEEEEEEEEETT----TEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHT-T
T ss_pred             CCCEEEEEEECCEEEEEEEECCC----HHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH-C
T ss_conf             68669999779999999962430----118987135977398799999999999998658978999945321579983-8


Q ss_pred             CCEECCHHH
Q ss_conf             948829678
Q 002450          866 GFKKIDPEL  874 (920)
Q Consensus       866 GF~~i~~~e  874 (920)
                      ||+.+.+..
T Consensus       131 GF~~~~~~~  139 (156)
T d2fiwa1         131 GYVAKQRNT  139 (156)
T ss_dssp             TCEEEEEEE
T ss_pred             CCEEEEEEE
T ss_conf             998998999

>d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Tabtoxin resistance protein
species: Pseudomonas syringae [TaxId: 317]

Probab=98.80  E-value=3.4e-08  Score=69.48  Aligned_cols=108  Identities=15%  Similarity=0.197  Sum_probs=80.3

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEEC----CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC--CHHHHHH
Q ss_conf             761999994489699999997747----8146753334204855779159999999998321491199983--8132599
Q 002450          786 GGMYCAILTVNSSVVSAGILRVFG----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLP--AAEEAES  859 (920)
Q Consensus       786 ~GfY~~VLe~~~~iVsaAslrI~G----~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~Lvlp--A~~ea~~  859 (920)
                      .+.+.+|.+.+++||+.+.+....    ...+||-.++|+++|||||+|+.|+..+++.+...|+..+.|.  ..+.+..
T Consensus        57 ~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~l~L~~~~n~~a~~  136 (170)
T d1ghea_          57 GSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEA  136 (170)
T ss_dssp             TSEEEEEEEETTEEEEEEEEEECCSTTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHH
T ss_pred             CCCEEEEEEECCEEEEEEEEEECCCCCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
T ss_conf             98489999989999898998621456777489999999960465188488999999999987598467653133347799


Q ss_pred             HHHHCCCCEECCHHHHHHHHHHCCCEEEECCCCEEEECC
Q ss_conf             978336948829678999987175402334861023112
Q 002450          860 IWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRV  898 (920)
Q Consensus       860 ~Wt~kFGF~~i~~~el~~~~~~~~~~~~F~Gts~LqK~L  898 (920)
                      +|.+ +||..++.--  .|...  .--.+..++.+.|.|
T Consensus       137 fY~k-~GF~~~g~~~--~y~~~--~~g~~~d~~~~~k~L  170 (170)
T d1ghea_         137 FYSA-LAYTRVGELP--GYCAT--PDGRLHPTAIYFKTL  170 (170)
T ss_dssp             HHHH-TTCEEEEEEE--EEEEC--TTSCEEEEEEEEEEC
T ss_pred             HHHH-CCCEEEEEEC--CCEEC--CCCCEEEEEEEEEEC
T ss_conf             9997-8999997767--80189--799897899999989

>d1xeba_ d.108.1.1 (A:) Hypothetical protein PA0115 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PA0115
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.80  E-value=1.1e-08  Score=72.85  Aligned_cols=91  Identities=13%  Similarity=0.113  Sum_probs=72.8

Q ss_pred             CCEEC-CEEEEEEEECCEEEEEEEEEEEC--CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC-CEEEECCHHHH
Q ss_conf             73217-61999994489699999997747--8146753334204855779159999999998321491-19998381325
Q 002450          782 GQEFG-GMYCAILTVNSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRV-KSIVLPAAEEA  857 (920)
Q Consensus       782 r~~f~-GfY~~VLe~~~~iVsaAslrI~G--~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgV-e~LvlpA~~ea  857 (920)
                      +.|+. .-+-++...++++|+++.+...+  .+.+.|.-+||+++|||+|+|+.||..+++.+...+. ..++|.|...+
T Consensus        41 ~~D~~~~s~hl~~~~~~~~vg~~rl~~~~~~~~~~~i~rvaV~~~~Rg~GiG~~L~~~~l~~~~~~~~~~~i~l~A~~~a  120 (149)
T d1xeba_          41 GLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQLMERALQAAERLWLDTPVYLSAQAHL  120 (149)
T ss_dssp             SCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHHTTCCEEEEEESTT
T ss_pred             CCCCCCCEEEEEEEECCEEEEEEEEEECCCCCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHH
T ss_conf             77666860899999689278999875113568818999989820330367258999999999998689987999676999


Q ss_pred             HHHHHHCCCCEECCHH
Q ss_conf             9997833694882967
Q 002450          858 ESIWTDKFGFKKIDPE  873 (920)
Q Consensus       858 ~~~Wt~kFGF~~i~~~  873 (920)
                      ++||.+ |||..+++.
T Consensus       121 ~~FY~k-~GF~~~g~~  135 (149)
T d1xeba_         121 QAYYGR-YGFVAVTEV  135 (149)
T ss_dssp             HHHHHT-TTEEECSCC
T ss_pred             HHHHHH-CCCEECCCC
T ss_conf             999997-799897886

>d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase EF0945
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.77  E-value=2.8e-08  Score=69.99  Aligned_cols=123  Identities=13%  Similarity=0.156  Sum_probs=84.9

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC--CCCCCEECCEEEEEEEECCEEEEEEEEEEEC----------------
Q ss_conf             9999997240686312585778200101044--6897321761999994489699999997747----------------
Q 002450          748 SQAVAIFHDCFDPIVDSISGRDLIPSMVYGR--NLRGQEFGGMYCAILTVNSSVVSAGILRVFG----------------  809 (920)
Q Consensus       748 a~AL~I~~EcF~Pivd~rTgrDLI~~mVyg~--~~~r~~f~GfY~~VLe~~~~iVsaAslrI~G----------------  809 (920)
                      ..-..+|++.+.|+.......++...+-...  ...+..+..++  |.+.+++++++.......                
T Consensus        16 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--v~e~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~   93 (189)
T d1u6ma_          16 RLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRIL--VYEHAGEVAGIAVGYPAEDEKIIDEPLREVFKKH   93 (189)
T ss_dssp             HHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEE--EEEETTEEEEEEEEEEGGGTTTSSHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE--EEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHC
T ss_conf             99999999855533267788999999999973711136554299--9997572789999962642000001344444321


Q ss_pred             ---------------CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHH---HHHHHHHCCCCEECC
Q ss_conf             ---------------81467533342048557791599999999983214911999838132---599978336948829
Q 002450          810 ---------------QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---AESIWTDKFGFKKID  871 (920)
Q Consensus       810 ---------------~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e---a~~~Wt~kFGF~~i~  871 (920)
                                     .+.++|-.+||.++|||||+|+.|+.++++.++..|...+++.+..+   +..+|.+ |||..++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~v~~~N~~a~~~Yek-~GF~~~~  172 (189)
T d1u6ma_          94 GLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYAS-KGFKDVT  172 (189)
T ss_dssp             TSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHHHHHT-TTCEEEE
T ss_pred             CCCCCCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH-CCCEEEE
T ss_conf             433332112344567997999989999899499967222678999998669852478870799999999998-8998998


Q ss_pred             HH
Q ss_conf             67
Q 002450          872 PE  873 (920)
Q Consensus       872 ~~  873 (920)
                      +.
T Consensus       173 ~~  174 (189)
T d1u6ma_         173 TM  174 (189)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             99

>d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Glucosamine-phosphate N-acetyltransferase GNA1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=4e-08  Score=69.00  Aligned_cols=83  Identities=14%  Similarity=0.155  Sum_probs=72.7

Q ss_pred             EEEEEEEECCEEEEEEEEEEE------CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH
Q ss_conf             199999448969999999774------78146753334204855779159999999998321491199983813259997
Q 002450          788 MYCAILTVNSSVVSAGILRVF------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIW  861 (920)
Q Consensus       788 fY~~VLe~~~~iVsaAslrI~------G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~W  861 (920)
                      .+.++.+.++++|+.+.+.+.      +...+.+-.+++.++|||||+|+.||..+++.++..|+..+++.+.+.++.+|
T Consensus        62 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~Gig~~L~~~~~~~a~~~g~~~i~l~~~~~~~~~Y  141 (157)
T d1i12a_          62 PMVIVDKRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFY  141 (157)
T ss_dssp             CEEEEETTTTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHH
T ss_pred             EEEEEEEECCEEEEEEEEECCCCCCCCCCCEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH
T ss_conf             39999977998999998750345445676246799889628664998357899999999998799889999898999999


Q ss_pred             HHCCCCEECC
Q ss_conf             8336948829
Q 002450          862 TDKFGFKKID  871 (920)
Q Consensus       862 t~kFGF~~i~  871 (920)
                      .+ +||...+
T Consensus       142 ~k-~GF~~~g  150 (157)
T d1i12a_         142 EK-CGFSNAG  150 (157)
T ss_dssp             HH-TTCEEEE
T ss_pred             HH-CCCEEEE
T ss_conf             96-8997956

>d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable N-acetyltransferase PA0478
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.74  E-value=8.6e-08  Score=66.78  Aligned_cols=86  Identities=9%  Similarity=0.017  Sum_probs=74.6

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEE-----CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH---HH
Q ss_conf             76199999448969999999774-----78146753334204855779159999999998321491199983813---25
Q 002450          786 GGMYCAILTVNSSVVSAGILRVF-----GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EA  857 (920)
Q Consensus       786 ~GfY~~VLe~~~~iVsaAslrI~-----G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea  857 (920)
                      ..+++.|.+.++++||.+.+...     ..+.+.+--+.|+++|||+|+|++|+.++++.+...|+.++.+.+.+   .+
T Consensus        47 ~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~i~~~~V~p~~Rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~a  126 (156)
T d2fe7a1          47 SPTRALMCLSEGRPIGYAVFFYSYSTWLGRNGIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPA  126 (156)
T ss_dssp             CSEEEEEEEETTEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHH
T ss_pred             CCCEEEEEEECCEEEEEEEEEECCCCCCCCCEEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH
T ss_conf             97358998528979998767502454445776776211100023206768999999999999726775357870788999


Q ss_pred             HHHHHHCCCCEECCH
Q ss_conf             999783369488296
Q 002450          858 ESIWTDKFGFKKIDP  872 (920)
Q Consensus       858 ~~~Wt~kFGF~~i~~  872 (920)
                      ..+|.+ +||.++++
T Consensus       127 ~~~Y~k-~GF~~~~~  140 (156)
T d2fe7a1         127 IDFYRS-IGALPQDE  140 (156)
T ss_dssp             HHHHHH-TTCEECTT
T ss_pred             HHHHHH-CCCEECCC
T ss_conf             999998-79989475

>d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PH0736
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.69  E-value=8.6e-08  Score=66.81  Aligned_cols=83  Identities=18%  Similarity=0.171  Sum_probs=67.7

Q ss_pred             EEEEEECCEEEEEEEEEEE---------------CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE--EC
Q ss_conf             9999448969999999774---------------781467533342048557791599999999983214911999--83
Q 002450          790 CAILTVNSSVVSAGILRVF---------------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIV--LP  852 (920)
Q Consensus       790 ~~VLe~~~~iVsaAslrI~---------------G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~Lv--lp  852 (920)
                      ..|++.+++|||++.+...               +.+.++|-.++++++|||||+|+.||..+++.++..|++.++  .+
T Consensus        69 ~~va~~d~~ivG~~~l~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~ak~~G~~~~l~~~~  148 (182)
T d2gana1          69 LYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKDPYVVTFP  148 (182)
T ss_dssp             EEEEEESSCEEEEEEEECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred             EEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             99999899899999973267433432225444677987999999999766699879999999999999859929999816


Q ss_pred             CHHHHHHHHHHCCCCEECCHH
Q ss_conf             813259997833694882967
Q 002450          853 AAEEAESIWTDKFGFKKIDPE  873 (920)
Q Consensus       853 A~~ea~~~Wt~kFGF~~i~~~  873 (920)
                      +.+.|..+|.+ +||..+..-
T Consensus       149 ~n~~a~~fY~k-~GF~~~~~y  168 (182)
T d2gana1         149 NLEAYSYYYMK-KGFREIMRY  168 (182)
T ss_dssp             GGSHHHHHHHT-TTEEEEECC
T ss_pred             CCHHHHHHHHH-CCCEEEEEE
T ss_conf             99899999997-899995487

>d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase PF0028
species: Pyrococcus furiosus [TaxId: 2261]

Probab=98.66  E-value=1.1e-07  Score=66.15  Aligned_cols=79  Identities=19%  Similarity=0.138  Sum_probs=67.2

Q ss_pred             EEEECCEEEEEEEEEEE-----CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHH--HHHHHHHC
Q ss_conf             99448969999999774-----781467533342048557791599999999983214911999838132--59997833
Q 002450          792 ILTVNSSVVSAGILRVF-----GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE--AESIWTDK  864 (920)
Q Consensus       792 VLe~~~~iVsaAslrI~-----G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e--a~~~Wt~k  864 (920)
                      ++..++++||.+.+.+.     +...+.+--++|.++|||||+|+.||..+++.++.+|+.++.|.+..+  |..+|.+ 
T Consensus        57 ~~~~~g~ivG~~~~~~~~~~~~~~~~~~i~~l~V~~~~Rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~n~A~~~Y~k-  135 (149)
T d1vkca_          57 ALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEE-  135 (149)
T ss_dssp             EEETTCCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHHHHH-
T ss_pred             EEECCCEEEEEEEEEECCCCCCCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH-
T ss_conf             9926996999999996267778876899999998777759982999999999999987998899998899779999998-


Q ss_pred             CCCEECC
Q ss_conf             6948829
Q 002450          865 FGFKKID  871 (920)
Q Consensus       865 FGF~~i~  871 (920)
                      +||....
T Consensus       136 ~GF~~~~  142 (149)
T d1vkca_         136 RGYKARA  142 (149)
T ss_dssp             TTCCCCC
T ss_pred             CCCEEEE
T ss_conf             8799987

>d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Protease synthase and sporulation negative regulatory protein PaiA
species: Bacillus subtilis [TaxId: 1423]

Probab=98.65  E-value=2e-07  Score=64.38  Aligned_cols=146  Identities=12%  Similarity=0.119  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCH--HHHCCCC-CC-CCEECCEEEEEEEECCEEEEEEEEEEE-------CCEE
Q ss_conf             89899999997240686312585778200--1010446-89-732176199999448969999999774-------7814
Q 002450          744 RLLLSQAVAIFHDCFDPIVDSISGRDLIP--SMVYGRN-LR-GQEFGGMYCAILTVNSSVVSAGILRVF-------GQEV  812 (920)
Q Consensus       744 ~s~La~AL~I~~EcF~Pivd~rTgrDLI~--~mVyg~~-~~-r~~f~GfY~~VLe~~~~iVsaAslrI~-------G~~v  812 (920)
                      ......+.+.|.+-|.+...+   -|+-.  ...|+.. +. .+.-......|.+.++++||.+.+...       +...
T Consensus        13 ~~l~~l~~~~~~~~~~~~~~~---e~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~   89 (173)
T d1tiqa_          13 QTLQQLSIETFNDTFKEQNSP---ENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQSEEMGAES   89 (173)
T ss_dssp             HHHHHHHHHHHHHHHSTTSCH---HHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGSSSCCCTTE
T ss_pred             HHHHHHHHHHHHHHHCCCCCH---HHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCEECCEEEEEECCCCCCCCCCCE
T ss_conf             999999999999973152999---99999998538999999998299957999998987041489995676554468986


Q ss_pred             EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCH---HHHHHHHHHCCCCEECCHHHHHHHHHHCCCEEEEC
Q ss_conf             675333420485577915999999999832149119998381---32599978336948829678999987175402334
Q 002450          813 AELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFK  889 (920)
Q Consensus       813 AEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~---~ea~~~Wt~kFGF~~i~~~el~~~~~~~~~~~~F~  889 (920)
                      ++|-.+++.+.|||+|+|+.||.++++.+...|+.++++.+.   ..+..+|.+ +||.++++... .+ ..     ...
T Consensus        90 ~~i~~i~v~~~~rgkGig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~fY~k-~GF~~~g~~~~-~~-~~-----~~~  161 (173)
T d1tiqa_          90 LEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKK-MGFVQTGAHSF-YM-GD-----EEQ  161 (173)
T ss_dssp             EEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH-TTCEEEEEEEE-EE-TT-----EEE
T ss_pred             EEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHH-CCCEEEEEEEE-EC-CC-----CCC
T ss_conf             999999999899599977006676666434220100010244148999999998-79989607974-15-99-----774


Q ss_pred             CCCEEEECCCC
Q ss_conf             86102311247
Q 002450          890 GTSMLQKRVPA  900 (920)
Q Consensus       890 Gts~LqK~L~~  900 (920)
                      ...+|.|.|..
T Consensus       162 ~~~im~k~L~~  172 (173)
T d1tiqa_         162 TDLIMAKTLIL  172 (173)
T ss_dssp             EEEEEEEECCC
T ss_pred             EEEEEEEECCC
T ss_conf             79999948888

>d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside N-acetyltransferase AAC(6')-IY
species: Salmonella enteritidis [TaxId: 149539]

Probab=98.64  E-value=2.6e-07  Score=63.56  Aligned_cols=84  Identities=11%  Similarity=0.128  Sum_probs=71.2

Q ss_pred             EEEEEEEECCEEEEEEEEEEEC--------CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHH---
Q ss_conf             1999994489699999997747--------81467533342048557791599999999983214911999838132---
Q 002450          788 MYCAILTVNSSVVSAGILRVFG--------QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---  856 (920)
Q Consensus       788 fY~~VLe~~~~iVsaAslrI~G--------~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e---  856 (920)
                      ...++...++++|+.+.+.+..        .+.+.+-.++|+++|||||+|+.|+..+++.++..|+.++.+.+..+   
T Consensus        45 ~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~  124 (147)
T d1s3za_          45 LASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTI  124 (147)
T ss_dssp             EEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHH
T ss_pred             CEEEEEEECCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
T ss_conf             48999998999999999996057656567787699999999789869718999999999986531465229997489899


Q ss_pred             HHHHHHHCCCCEECCH
Q ss_conf             5999783369488296
Q 002450          857 AESIWTDKFGFKKIDP  872 (920)
Q Consensus       857 a~~~Wt~kFGF~~i~~  872 (920)
                      +..+|.+ +||+.++.
T Consensus       125 a~~fY~k-~GF~~~~~  139 (147)
T d1s3za_         125 SQKVHQA-LGFEETER  139 (147)
T ss_dssp             HHHHHHH-TTCEEEEE
T ss_pred             HHHHHHH-CCCEEECE
T ss_conf             9999998-89989873

>d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase EF1919
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.62  E-value=1.1e-07  Score=66.10  Aligned_cols=85  Identities=24%  Similarity=0.226  Sum_probs=73.3

Q ss_pred             EEEEEEECCEEEEEEEEEEEC-CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH---HHHHHHHHC
Q ss_conf             999994489699999997747-8146753334204855779159999999998321491199983813---259997833
Q 002450          789 YCAILTVNSSVVSAGILRVFG-QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWTDK  864 (920)
Q Consensus       789 Y~~VLe~~~~iVsaAslrI~G-~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~Wt~k  864 (920)
                      +..|++.++++|+.+.+.... ...+++-.++|.+.|||+|+|+.|+..+++.+...|++++.+....   .+..+|.+ 
T Consensus        51 ~~~v~~~~~~~~g~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k-  129 (157)
T d2fiaa1          51 RLYLLVHEEMIFSMATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFES-  129 (157)
T ss_dssp             CEEEEEETTEEEEEEEEEECTTCSEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHH-
T ss_pred             CEEEEEECCEEEEEEEEEECCCCCEEEECCCEECHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH-
T ss_conf             6599999997899888751376542220052799888699974213589999999779988999816780999999998-


Q ss_pred             CCCEECCHHH
Q ss_conf             6948829678
Q 002450          865 FGFKKIDPEL  874 (920)
Q Consensus       865 FGF~~i~~~e  874 (920)
                      +||+.+++..
T Consensus       130 ~GF~~v~e~~  139 (157)
T d2fiaa1         130 KGFTKIHESL  139 (157)
T ss_dssp             TTCEEEEEEC
T ss_pred             CCCEEEEEEC
T ss_conf             8999962587

>d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine acetyltransferase EF1086 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable spermine/spermidine acetyltransferase EF1086
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.58  E-value=3e-07  Score=63.22  Aligned_cols=88  Identities=11%  Similarity=0.083  Sum_probs=72.6

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHH-HHHHCCCCEEEECCHH---HHHHHH
Q ss_conf             761999994489699999997747814675333420485577915999999999-8321491199983813---259997
Q 002450          786 GGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEK-LLSFLRVKSIVLPAAE---EAESIW  861 (920)
Q Consensus       786 ~GfY~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~-~L~~LgVe~LvlpA~~---ea~~~W  861 (920)
                      ...+++++..++++||.+.++......+++-.+++.++|||||+|+.|+..+++ .....+++++.+....   .+..+|
T Consensus        43 ~~~~~~~i~~~~~~vG~~~~~~~~~~~~~i~~~~v~~~~rgkGiG~~ll~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y  122 (146)
T d2fl4a1          43 PEWESAGIYDGNQLIGYAMYGRWQDGRVWLDRFLIDQRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLY  122 (146)
T ss_dssp             TTEEEEEEEETTEEEEEEEEEECTTSCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECTTCHHHHHHH
T ss_pred             CCEEEEEEEECCEEEEEEEEEECCCCEEEEEEEEECHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHH
T ss_conf             97079999989999999999972897499963898589969981343556420241124673078752132519999999


Q ss_pred             HHCCCCEECCHHH
Q ss_conf             8336948829678
Q 002450          862 TDKFGFKKIDPEL  874 (920)
Q Consensus       862 t~kFGF~~i~~~e  874 (920)
                      .+ +||..+++.+
T Consensus       123 ~k-~GF~~~g~~~  134 (146)
T d2fl4a1         123 QQ-LGFVFNGELD  134 (146)
T ss_dssp             HH-TTCEEEEEEC
T ss_pred             HH-CCCEEEEEEE
T ss_conf             98-8998952994

>d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: EF1021-like
domain: Putative acetyltransferase Ava4977
species: Anabaena variabilis [TaxId: 1172]

Probab=98.58  E-value=5.5e-07  Score=61.45  Aligned_cols=110  Identities=18%  Similarity=0.253  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEEEEEC-----C--EEEEEEEEE
Q ss_conf             999999972406863125857782001010446897321761999994489699999997747-----8--146753334
Q 002450          747 LSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFG-----Q--EVAELPLVA  819 (920)
Q Consensus       747 La~AL~I~~EcF~Pivd~rTgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAslrI~G-----~--~vAEiPlvA  819 (920)
                      +.+...++.+||..-..        ..=.|-.   ++.-+.||  |+..+++||+.+.+..++     .  ..+.|-.||
T Consensus        12 ~~~l~~l~~~~F~~~~~--------~~~~~~~---~~~~~~~~--v~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~   78 (283)
T d2ozga2          12 IQQLGNILEQCFVMSFG--------DSEIYVK---GIGLENFR--VIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAVG   78 (283)
T ss_dssp             HHHHHHHHHHHTTCCTT--------HHHHHHH---HHCGGGEE--EEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHCCCCCC--------CHHHHHH---HHCCCCEE--EEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEE
T ss_conf             99999999987699967--------6999998---73689889--99999999999998871035898560174698999


Q ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCEECCH
Q ss_conf             20485577915999999999832149119998381325999783369488296
Q 002450          820 TSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP  872 (920)
Q Consensus       820 T~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~  872 (920)
                      |.++|||||+++.|+..+.+.+...|+...++.+.  ..++|.+ |||..+..
T Consensus        79 v~p~~rg~G~~~~L~~~~~~~~~~~g~~~~~l~~~--~~~~Y~~-~Gf~~~~~  128 (283)
T d2ozga2          79 IAPEYRGDGAAIALIQHTLQEISEQDIPISVLYPA--TQRLYRK-AGYEQAGS  128 (283)
T ss_dssp             ECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHH-TTCEEEEE
T ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCC--CCCHHHC-CCCEEECE
T ss_conf             98101469859999999999998609669972687--6046770-89969041

>d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein YqiY
species: Bacillus subtilis [TaxId: 1423]

Probab=98.55  E-value=1.1e-07  Score=65.97  Aligned_cols=115  Identities=10%  Similarity=0.065  Sum_probs=82.3

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEEEE--ECCEEEEEEEEEECCCCC
Q ss_conf             999999724068631258577820010104468973217619999944896999999977--478146753334204855
Q 002450          748 SQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRV--FGQEVAELPLVATSKINH  825 (920)
Q Consensus       748 a~AL~I~~EcF~Pivd~rTgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAslrI--~G~~vAEiPlvAT~~~yr  825 (920)
                      .....++++.|...    .-.+.++.+.+..      +.+. ++|.+.++++|+.+....  .+.+.+++-.++|.++||
T Consensus        13 ~~i~~l~~~~~~~~----~~~~~~~~~~~~~------~~~~-~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~r   81 (157)
T d1mk4a_          13 EMVTSVLNEWWGGR----QLKEKLPRLFFEH------FQDT-SFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFR   81 (157)
T ss_dssp             HHHHHHTTTSSTTC----CCSCCCCTHHHHH------CGGG-CEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSC
T ss_pred             HHHHHHHHHHHCCC----CHHHHHHHHHHHC------CCCE-EEEEEECCEEEEEEEEEEECCCCCCCEEEEEEEEHHHC
T ss_conf             99999999873687----5356777766521------6863-99999999998876445402577654003899978983


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEECCHHH---HHHHHHHCCCCEECCHHH
Q ss_conf             7791599999999983214911999838132---599978336948829678
Q 002450          826 GKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---AESIWTDKFGFKKIDPEL  874 (920)
Q Consensus       826 rqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e---a~~~Wt~kFGF~~i~~~e  874 (920)
                      |+|+|++|+..+++.+...|++++++.+.++   +..+|.+ +||.......
T Consensus        82 g~Gig~~Ll~~~~~~~~~~g~~~v~~~~~~~N~~a~~~y~k-~GF~~~~~~~  132 (157)
T d1mk4a_          82 KMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTK-LGFDIEKGTK  132 (157)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHH-TTCEECCCSE
T ss_pred             CCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHH-CCCEEEEEEE
T ss_conf             88634317788877502554227999842243899999998-8999931372

>d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Transcriptional regulator BH1968
species: Bacillus halodurans [TaxId: 86665]

Probab=98.54  E-value=7.4e-07  Score=60.60  Aligned_cols=85  Identities=15%  Similarity=0.075  Sum_probs=70.9

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEEC------CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH---H
Q ss_conf             761999994489699999997747------8146753334204855779159999999998321491199983813---2
Q 002450          786 GGMYCAILTVNSSVVSAGILRVFG------QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---E  856 (920)
Q Consensus       786 ~GfY~~VLe~~~~iVsaAslrI~G------~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---e  856 (920)
                      ...+.++.+.++++|+.+.+.+.+      ...+.+--+++.++|||+|+|+.|+..+++.++..|+..+.+.+.+   .
T Consensus        50 ~~~~~~~~~~~g~iiG~~~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~l~~~~~~~a~~~g~~~i~l~~~~~N~~  129 (150)
T d1z4ea1          50 KNNELIVACNGEEIVGMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPD  129 (150)
T ss_dssp             TTEEEEEEEETTEEEEEEEEEEEECSHHHHCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTT
T ss_pred             CCCEEEEEEECCCEEEEEEEEEECCCCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
T ss_conf             98289999989956999999951234768887899998970887829982577999999999986997999998689999


Q ss_pred             HHHHHHHCCCCEECC
Q ss_conf             599978336948829
Q 002450          857 AESIWTDKFGFKKID  871 (920)
Q Consensus       857 a~~~Wt~kFGF~~i~  871 (920)
                      +..+|.+ +||.+..
T Consensus       130 a~~~y~k-~GF~~~~  143 (150)
T d1z4ea1         130 ALRFYEQ-LGFKASH  143 (150)
T ss_dssp             HHHHHHH-HTCEEEE
T ss_pred             HHHHHHH-CCCEECC
T ss_conf             9999998-8998935

>d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: EF1021-like
domain: Putative acetyltransferase EF2353
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.52  E-value=3.9e-07  Score=62.46  Aligned_cols=121  Identities=11%  Similarity=0.085  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHCCCCCCCCCC--CCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEEE-----EECC--EEEEEEE
Q ss_conf             99999997240686312585--7782001010446897321761999994489699999997-----7478--1467533
Q 002450          747 LSQAVAIFHDCFDPIVDSIS--GRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILR-----VFGQ--EVAELPL  817 (920)
Q Consensus       747 La~AL~I~~EcF~Pivd~rT--grDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAslr-----I~G~--~vAEiPl  817 (920)
                      +.+..++++.+|.+-.....  +............ ..++...+|  +...+|++||.+.+.     +.|.  ..+.|-.
T Consensus        11 ~~~i~~L~~~~F~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~lvg~~~~~~~~~~~~g~~~~~~~i~~   87 (291)
T d2i00a2          11 IDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQ-PILELSKVF--GWFHENQLISQIAIYPCEVNIHGALYKMGGVTG   87 (291)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTH-HHHHHSEEE--EEEETTEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred             HHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHC-CCCCCCCEE--EEEECCEEEEEEEEEEEEEEECCEEEEEEEEEE
T ss_conf             99999999987285522100022133678887632-000248489--999999999999999848889983501778999


Q ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCEECCHH
Q ss_conf             34204855779159999999998321491199983813259997833694882967
Q 002450          818 VATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPE  873 (920)
Q Consensus       818 vAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~~  873 (920)
                      |+|.++|||||+++.||..+.+.+...|+...++.+.  ..++|.+ |||..+...
T Consensus        88 v~v~p~~r~~G~~~~L~~~~~~~~~~~~~~~~~l~~~--~~~~Y~~-~Gf~~~~~~  140 (291)
T d2i00a2          88 VGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFPY--NIPYYRR-KGWEIMSDK  140 (291)
T ss_dssp             EEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHH-TTCEEEEEE
T ss_pred             EEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECC--CHHHHHC-CCCEEECCE
T ss_conf             9996543599869999999999998549767996045--6436761-898891117

>d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: EF1021-like
domain: Hypothetical protein EF1021
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.50  E-value=7.2e-07  Score=60.66  Aligned_cols=112  Identities=12%  Similarity=0.164  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEE-----EEECC--EEEEEEEEE
Q ss_conf             99999997240686312585778200101044689732176199999448969999999-----77478--146753334
Q 002450          747 LSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGIL-----RVFGQ--EVAELPLVA  819 (920)
Q Consensus       747 La~AL~I~~EcF~Pivd~rTgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAsl-----rI~G~--~vAEiPlvA  819 (920)
                      +....++..++|..-..+ ..+...     ...   .+-.-+|  ++..+|++||.+.+     .+.|.  ..+.|-.||
T Consensus        13 ~~~i~~l~~~~F~~~~~~-~~~~~~-----~~~---~~~~~~~--~~~~~~~lvg~~~~~~~~~~~~g~~~~~~~i~~v~   81 (285)
T d2hv2a2          13 MKEMFDLVIYAFNQEPTA-ERQERF-----EKL---LSHTQSY--GFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVA   81 (285)
T ss_dssp             HHHHHHHHHHHTTCCCCH-HHHHHH-----HHH---HHTSEEE--EEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHCCCCCCH-HHHHHH-----HHH---HCCCCEE--EEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEE
T ss_conf             999999999975999981-689999-----974---1669689--99999989999999986777888021078899999


Q ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCEECCH
Q ss_conf             20485577915999999999832149119998381325999783369488296
Q 002450          820 TSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP  872 (920)
Q Consensus       820 T~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~  872 (920)
                      |.++|||+|+++.||..+.+.++..|+...++.+.  ..++|.+ |||..+..
T Consensus        82 v~p~~rg~G~~~~l~~~~~~~~~~~g~~~~~l~~~--~~~~Y~~-~Gf~~~~~  131 (285)
T d2hv2a2          82 SYPEYRGEGGISAIMKEMLADLAKQKVALSYLAPF--SYPFYRQ-YGYEQTFE  131 (285)
T ss_dssp             ECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHT-TTCEECCE
T ss_pred             ECHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECC--CHHHHHC-CCCEEEEE
T ss_conf             98888489849999999999998739960145224--5215760-89689201

>d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Serotonin N-acetyltranferase
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.47  E-value=4.2e-07  Score=62.25  Aligned_cols=83  Identities=18%  Similarity=0.152  Sum_probs=67.3

Q ss_pred             EEEEECCEEEEEEEEEEE---------------CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH-CCCCEEEECCH
Q ss_conf             999448969999999774---------------78146753334204855779159999999998321-49119998381
Q 002450          791 AILTVNSSVVSAGILRVF---------------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSF-LRVKSIVLPAA  854 (920)
Q Consensus       791 ~VLe~~~~iVsaAslrI~---------------G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~-LgVe~LvlpA~  854 (920)
                      .+++.++++++.......               +.+.++|-.++|.++|||+|+|+.||..+.+.++. .+++.+++-+.
T Consensus        53 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~~~~~~i~l~~~  132 (166)
T d1cjwa_          53 LGWFVEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCE  132 (166)
T ss_dssp             EEEEETTEEEEEEEEEEECSSSCCGGGGGCCCTTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred             EEEEECCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             99998890456520111453210244542136899989999999977871578999999999999998589806898428


Q ss_pred             HHHHHHHHHCCCCEECCHHH
Q ss_conf             32599978336948829678
Q 002450          855 EEAESIWTDKFGFKKIDPEL  874 (920)
Q Consensus       855 ~ea~~~Wt~kFGF~~i~~~e  874 (920)
                      +.+..+|.+ +||+.+++.+
T Consensus       133 ~~ai~fY~k-~GF~~~G~~~  151 (166)
T d1cjwa_         133 DALVPFYQR-FGFHPAGPCA  151 (166)
T ss_dssp             GGGHHHHHT-TTEEEEEECS
T ss_pred             HHHHHHHHH-CCCEEECCEE
T ss_conf             889999998-8998984053

>d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Phosphinothricin acetyltransferase
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.46  E-value=1.1e-06  Score=59.47  Aligned_cols=104  Identities=9%  Similarity=0.071  Sum_probs=75.0

Q ss_pred             EEEEEEECCEEEEEEEEEEECC----EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCH---HHHHHHH
Q ss_conf             9999944896999999977478----14675333420485577915999999999832149119998381---3259997
Q 002450          789 YCAILTVNSSVVSAGILRVFGQ----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EEAESIW  861 (920)
Q Consensus       789 Y~~VLe~~~~iVsaAslrI~G~----~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~---~ea~~~W  861 (920)
                      ..+|.+.++++|+.+.+..+..    ..+++-.+++.++|||||+|+.|+..+++.+..+|++++++.+.   +.+..+|
T Consensus        53 ~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~v~p~~rg~Glg~~ll~~~~~~a~~~g~~~l~~~v~~~N~~a~~~y  132 (163)
T d1yr0a1          53 PVIVAILDGKVAGYASYGDWRAFDGYRHTREHSVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLH  132 (163)
T ss_dssp             CEEEEEETTEEEEEEEEEESSSSGGGTTEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHH
T ss_pred             CEEEEEECCEEEEEECCEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHH
T ss_conf             58999989928775100000234556612898765510335788720511020000124542059999933887899999


Q ss_pred             HHCCCCEECCHHHHHHHHHHCCCEEEECCCCEEEECC
Q ss_conf             8336948829678999987175402334861023112
Q 002450          862 TDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRV  898 (920)
Q Consensus       862 t~kFGF~~i~~~el~~~~~~~~~~~~F~Gts~LqK~L  898 (920)
                      .+ +||...+...  .+   ....-.|-+...|+|.|
T Consensus       133 ~k-~GF~~~G~~~--~~---~~~~g~~~D~~~m~k~L  163 (163)
T d1yr0a1         133 ES-LGFRVVGRFS--EV---GTKFGRWLDLTCMELKL  163 (163)
T ss_dssp             HH-TTCEEEEEEE--EE---EEETTEEEEEEEEEEEC
T ss_pred             HH-CCCEEEEEEE--EE---EEECCEEEEEEEEEEEC
T ss_conf             97-8999999994--34---88999998999999889

>d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase YycN
species: Bacillus subtilis [TaxId: 1423]

Probab=98.46  E-value=1e-06  Score=59.68  Aligned_cols=83  Identities=16%  Similarity=0.205  Sum_probs=70.7

Q ss_pred             EEEEEEEECCEEEEEEEEEEE---CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH---HHHHHH
Q ss_conf             199999448969999999774---78146753334204855779159999999998321491199983813---259997
Q 002450          788 MYCAILTVNSSVVSAGILRVF---GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIW  861 (920)
Q Consensus       788 fY~~VLe~~~~iVsaAslrI~---G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~W  861 (920)
                      ++.++...++++|+.+.++..   ..+.+++-.++++++|||||+|+.|+..+++.+...|+.++++.+..   .+..+|
T Consensus        60 ~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y  139 (155)
T d1ufha_          60 HLWSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLY  139 (155)
T ss_dssp             EEEEEESSSSCEEEEEEEEECTTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHH
T ss_pred             EEEEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
T ss_conf             89999974983999999996304798735999999978986996332488899987650387326899848999999999


Q ss_pred             HHCCCCEECC
Q ss_conf             8336948829
Q 002450          862 TDKFGFKKID  871 (920)
Q Consensus       862 t~kFGF~~i~  871 (920)
                      .+ +||++++
T Consensus       140 ~k-~GF~~~g  148 (155)
T d1ufha_         140 EQ-TGFQETD  148 (155)
T ss_dssp             HH-TTCCCCC
T ss_pred             HH-CCCEEEE
T ss_conf             98-7999984

>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Nuclear corepressor KAP-1 (TIF-1beta)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=7.8e-08  Score=67.09  Aligned_cols=48  Identities=31%  Similarity=0.857  Sum_probs=40.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHH
Q ss_conf             56556126688888889899942534778985464557657677557999963031676353
Q 002450          628 ELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       628 e~~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~  689 (920)
                      ....|.+|++         ++.+|.||.|.+.||..|+.|    ++..+|.++||| +.|..
T Consensus         6 ~c~~C~~C~~---------~~~ll~Cd~C~~~~H~~C~~p----~l~~~p~~~W~C-~~C~~   53 (70)
T d1fp0a1           6 SATICRVCQK---------PGDLVMCNQCEFCFHLDCHLP----ALQDVPGEEWSC-SLCHV   53 (70)
T ss_dssp             SSSCCSSSCS---------SSCCEECTTSSCEECTTSSST----TCCCCCSSSCCC-CSCCC
T ss_pred             CCCCCCCCCC---------CCEEEECCCCCHHHCCCCCCC----CCCCCCCCCEEC-CCCCC
T ss_conf             9799877799---------697888999991563514899----868488989899-67948

>d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase TTHA1209
species: Thermus thermophilus [TaxId: 274]

Probab=98.43  E-value=1.3e-06  Score=59.01  Aligned_cols=88  Identities=15%  Similarity=0.037  Sum_probs=70.8

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEE-----CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCH---HHH
Q ss_conf             76199999448969999999774-----7814675333420485577915999999999832149119998381---325
Q 002450          786 GGMYCAILTVNSSVVSAGILRVF-----GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EEA  857 (920)
Q Consensus       786 ~GfY~~VLe~~~~iVsaAslrI~-----G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~---~ea  857 (920)
                      .+...++...++++|+.+.+...     +...+++-.++|.++|||+|+|+.|+..+++.++.+|+.++++...   +-+
T Consensus        57 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~~~l~v~~~N~~a  136 (174)
T d2cy2a1          57 PGRLFVAESESGEVVGFAAFGPDRASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKG  136 (174)
T ss_dssp             CCEEEEEECTTSCEEEEEEEEECCSCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHH
T ss_pred             CCEEEEEEECCCEEEEEEECCCCCCCCCCCCCEEEEEEEECHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHH
T ss_conf             74699999839988764202322343346773299999994799627972479999999999869976788883799999


Q ss_pred             HHHHHHCCCCEECCHHH
Q ss_conf             99978336948829678
Q 002450          858 ESIWTDKFGFKKIDPEL  874 (920)
Q Consensus       858 ~~~Wt~kFGF~~i~~~e  874 (920)
                      ..+|.+ +||..++..+
T Consensus       137 ~~~y~k-~GF~~~g~~~  152 (174)
T d2cy2a1         137 RGFYEH-LGGVLLGERE  152 (174)
T ss_dssp             HHHHHH-TTCEEEEEEE
T ss_pred             HHHHHH-CCCEEEEEEE
T ss_conf             999997-8998986899

>d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside 2'-N-acetyltransferase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.42  E-value=2e-06  Score=57.74  Aligned_cols=110  Identities=12%  Similarity=0.179  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEEEE----ECC---EEEEEEEE
Q ss_conf             89999999724068631258577820010104468973217619999944896999999977----478---14675333
Q 002450          746 LLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRV----FGQ---EVAELPLV  818 (920)
Q Consensus       746 ~La~AL~I~~EcF~Pivd~rTgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAslrI----~G~---~vAEiPlv  818 (920)
                      .+.....+..++|.-        |. ..--+.     ..+.+++.. ...++++|+.+.+.-    ++.   ..+.|-.|
T Consensus        20 ~~~~i~~l~~~aF~~--------d~-~~~~~~-----~~~~~~~~l-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~I~~v   84 (181)
T d1m4ia_          20 TRQDIRQMVTGAFAG--------DF-TETDWE-----HTLGGMHAL-IWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGV   84 (181)
T ss_dssp             HHHHHHHHHHHHTTT--------CC-CHHHHH-----HTCSSEEEE-EEETTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHCCC--------CC-CHHHHH-----HHCCCEEEE-EEECCCEEEEEEEEEEEEECCCCCCCEEEEEEE
T ss_conf             999999999986367--------87-788986-----205866999-996896058889999987318853336999899


Q ss_pred             EECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCEECCH
Q ss_conf             420485577915999999999832149119998381325999783369488296
Q 002450          819 ATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP  872 (920)
Q Consensus       819 AT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~  872 (920)
                      ||.++|||||+|++||.++++.++.-+ ...++.+.+.+.+||.+ |||.++..
T Consensus        85 ~V~p~~Rg~Gig~~Ll~~~~~~~r~~~-~~~~l~~~~~~~~fY~~-~G~~~~~~  136 (181)
T d1m4ia_          85 AVRADWRGQRLVSALLDAVEQVMRGAY-QLGALSSSARARRLYAS-RGWLPWHG  136 (181)
T ss_dssp             EECGGGTTSSHHHHHHHHHHHHHHHHC-SEEEEECCTTTHHHHHH-TTCEECCS
T ss_pred             EECHHHCCCHHHHHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHH-CCCEECCC
T ss_conf             986899798799999999999998549-99999565046899997-59988678

>d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative phosphinothricin acetyltransferase YwnH
species: Bacillus subtilis [TaxId: 1423]

Probab=98.41  E-value=1.4e-06  Score=58.72  Aligned_cols=102  Identities=14%  Similarity=0.094  Sum_probs=75.1

Q ss_pred             EEEEECCEEEEEEEEEEEC-----CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH---HHHHHHH
Q ss_conf             9994489699999997747-----8146753334204855779159999999998321491199983813---2599978
Q 002450          791 AILTVNSSVVSAGILRVFG-----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWT  862 (920)
Q Consensus       791 ~VLe~~~~iVsaAslrI~G-----~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~Wt  862 (920)
                      ++...+++||+.+.+..+.     ...+|+. +++.++|||||+|+.|+..+++.+..+|++++++...+   .+..+|.
T Consensus        55 v~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~-~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~i~~~v~~~N~~a~~~y~  133 (165)
T d1vhsa_          55 VAEDENGNVAAWISFETFYGRPAYNKTAEVS-IYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFE  133 (165)
T ss_dssp             EEECTTSCEEEEEEEEESSSSGGGTTEEEEE-EEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHH
T ss_pred             EEEECCCCEEEEEEEEECCCCCCCCCEEEEE-EECCCHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHH
T ss_conf             9996599358630000015666545149985-202712302444401354321221035420599999038878899999


Q ss_pred             HCCCCEECCHHHHHHHHHHCCCEEEECCCCEEEECCC
Q ss_conf             3369488296789999871754023348610231124
Q 002450          863 DKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVP  899 (920)
Q Consensus       863 ~kFGF~~i~~~el~~~~~~~~~~~~F~Gts~LqK~L~  899 (920)
                      + +||+.++....  +   ...--.+.....|+|.|.
T Consensus       134 k-~GF~~~g~~~~--~---~~~~g~~~D~~~m~k~l~  164 (165)
T d1vhsa_         134 K-HGFAEWGLFPG--I---AEMDGKRYDLKILGRELS  164 (165)
T ss_dssp             H-TTCEEEEEEEE--E---EEETTEEEEEEEEEEECC
T ss_pred             H-CCCEEEEEECC--E---EEECCEEEEEEEEEEECC
T ss_conf             8-89999999737--6---999999989899980888

>d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PA4866
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.41  E-value=1.2e-06  Score=59.17  Aligned_cols=107  Identities=10%  Similarity=0.053  Sum_probs=76.7

Q ss_pred             EEEEEECCEEEEEEEEEEECC----EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH---HHHHHHH
Q ss_conf             999944896999999977478----146753334204855779159999999998321491199983813---2599978
Q 002450          790 CAILTVNSSVVSAGILRVFGQ----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWT  862 (920)
Q Consensus       790 ~~VLe~~~~iVsaAslrI~G~----~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~Wt  862 (920)
                      .++.+.++++|+.+.+..+..    +-..+-.+++.++|||||+|+.|+..+++.+..+|..++++...+   .++.+|.
T Consensus        53 ~v~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~i~v~p~~rg~G~g~~l~~~~~~~a~~~g~~~l~~~v~~~N~~s~~~y~  132 (169)
T d1yvoa1          53 LVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHR  132 (169)
T ss_dssp             EEEECTTCCEEEEEEEEESSSSGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHH
T ss_pred             EEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCHHHHCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHH
T ss_conf             99992699788851135644444455138997630803404870333121000123344302799973157588999976


Q ss_pred             HCCCCEECCHHHHHHHHHHCCCEEEECCCCEEEECCCCCC
Q ss_conf             3369488296789999871754023348610231124774
Q 002450          863 DKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPACR  902 (920)
Q Consensus       863 ~kFGF~~i~~~el~~~~~~~~~~~~F~Gts~LqK~L~~~~  902 (920)
                      + +||+.++.-.  +++   ..--.+.....|+|.|++.+
T Consensus       133 k-~GF~~~g~~~--~~~---~~~g~~~D~~~~~~~l~~~~  166 (169)
T d1yvoa1         133 R-LGFEISGQMP--QVG---QKFGRWLDLTFMQLNLDPTR  166 (169)
T ss_dssp             H-TTCEEEEEEE--EEE---EETTEEEEEEEEEEESCTTC
T ss_pred             C-CCCEEEEEEE--EEE---EECCEEEEEEEEEEECCCCC
T ss_conf             2-8969999974--279---99999989999999989999

>d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PH1933
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.38  E-value=2.2e-06  Score=57.50  Aligned_cols=124  Identities=17%  Similarity=0.226  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHCCCCCCCCC-CCCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEEEEE------CCEEEEEEEE
Q ss_conf             89999999724068631258-5778200101044689732176199999448969999999774------7814675333
Q 002450          746 LLSQAVAIFHDCFDPIVDSI-SGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVF------GQEVAELPLV  818 (920)
Q Consensus       746 ~La~AL~I~~EcF~Pivd~r-TgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAslrI~------G~~vAEiPlv  818 (920)
                      -+..-+.+..+.|....... ...+.....+..  .-+.....++  |++.++++|+.+.+...      +...++|-.+
T Consensus        16 d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--v~~~~~~~vg~~~~~~~~~~~~~~~~~~~i~~l   91 (157)
T d1wwza1          16 ALNELIDVYMSGYEGLEEYGGEGRDYARNYIKW--CWKKASDGFF--VAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEF   91 (157)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHCSHHHHHHHHHHH--HHHHHGGGEE--EEEETTEEEEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH--HHHCCCCEEE--EEEECCEEEEEEEEECCCCCCCCCCCEEEEEEE
T ss_conf             999999999999741453056567789999999--9828997499--999999987888861256665468747999999


Q ss_pred             EECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE--CCHHHHHHHHHHCCCCEECCHHH
Q ss_conf             420485577915999999999832149119998--38132599978336948829678
Q 002450          819 ATSKINHGKGYFQLLFACIEKLLSFLRVKSIVL--PAAEEAESIWTDKFGFKKIDPEL  874 (920)
Q Consensus       819 AT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~Lvl--pA~~ea~~~Wt~kFGF~~i~~~e  874 (920)
                      +|.++|||||+|+.|+..+++.+...+...++.  +.-..+..+|.+ +||..+++..
T Consensus        92 ~V~p~~rg~GiG~~Ll~~~~~~a~~~~~~~~~~v~~~N~~a~~~Y~k-~GF~~~g~~~  148 (157)
T d1wwza1          92 VVDKKFQGKGIGRKLLITCLDFLGKYNDTIELWVGEKNYGAMNLYEK-FGFKKVGKSG  148 (157)
T ss_dssp             EECGGGTTSSHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH-TTCEEEEEET
T ss_pred             EEEEHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH-CCCEEEEEEC
T ss_conf             99701114036999999999999981995599982799999999997-7999972774

>d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside 3-N-acetyltransferase
species: Serratia marcescens [TaxId: 615]

Probab=98.35  E-value=7.8e-07  Score=60.45  Aligned_cols=118  Identities=16%  Similarity=0.081  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEEECCEEEEEEEEEEE-----CCEEEEEEE
Q ss_conf             789899999997240686312585778200101044689732176199999448969999999774-----781467533
Q 002450          743 TRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVF-----GQEVAELPL  817 (920)
Q Consensus       743 ~~s~La~AL~I~~EcF~Pivd~rTgrDLI~~mVyg~~~~r~~f~GfY~~VLe~~~~iVsaAslrI~-----G~~vAEiPl  817 (920)
                      ....|...+.++.+.|........  +....-.+...   ..-.+++.++...++++|+.+.+.++     +...++|-.
T Consensus        12 d~~~l~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~   86 (137)
T d1bo4a_          12 QVKSMRAALDLFGREFGDVATYSQ--HQPDSDYLGNL---LRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEIYIYD   86 (137)
T ss_dssp             CHHHHHHHHHHHHHHTTCHHHHHS--SCCCHHHHHHH---HHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCHHHHCC--CCCCHHHHHHH---HCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCEEEEEE
T ss_conf             699999999999998455443034--89839999986---3399759999998890201012234667567898799999


Q ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHH---HHHHHHHCCC
Q ss_conf             342048557791599999999983214911999838132---5999783369
Q 002450          818 VATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---AESIWTDKFG  866 (920)
Q Consensus       818 vAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e---a~~~Wt~kFG  866 (920)
                      ++|.++|||+|+|+.||.++++.+...|++++++.+.++   +..+|.+ +|
T Consensus        87 l~V~p~~Rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~~-~G  137 (137)
T d1bo4a_          87 LAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTK-LG  137 (137)
T ss_dssp             EEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEE-C-
T ss_pred             EEECHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHH-CC
T ss_conf             9996798401100489999999999869979999980888999999985-59

>d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase EF0244
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.34  E-value=2e-06  Score=57.68  Aligned_cols=81  Identities=11%  Similarity=0.066  Sum_probs=66.6

Q ss_pred             EEEEECCEEEEEEEEEEECC----EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHH---HHHHHHH
Q ss_conf             99944896999999977478----1467533342048557791599999999983214911999838132---5999783
Q 002450          791 AILTVNSSVVSAGILRVFGQ----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---AESIWTD  863 (920)
Q Consensus       791 ~VLe~~~~iVsaAslrI~G~----~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e---a~~~Wt~  863 (920)
                      .|.+.++++|+.+.++....    +.+.+-.+++.++|||||+|+.|+..+++.++..|++++.+.+.++   +..+|.+
T Consensus        53 ~va~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~v~~~~rg~Gig~~ll~~l~~~~~~~g~~~i~~~~~~~N~~a~~~y~~  132 (161)
T d2ae6a1          53 FVAISGQQLAGFIEVHPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEK  132 (161)
T ss_dssp             EEEEETTEEEEEEEEECSSSCGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHH
T ss_pred             EEEEECCEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHEEECCCCCCCHHHEEHHCCCCHHHHHHHHH
T ss_conf             99999999999874103566554516999989996300434432221011000012322022200203243999999998


Q ss_pred             CCCCEECCH
Q ss_conf             369488296
Q 002450          864 KFGFKKIDP  872 (920)
Q Consensus       864 kFGF~~i~~  872 (920)
                       +||...+.
T Consensus       133 -~GF~~~g~  140 (161)
T d2ae6a1         133 -HGFVQEAH  140 (161)
T ss_dssp             -TTCEEEEE
T ss_pred             -CCCEEEEE
T ss_conf             -89999999

>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Williams-Beuren syndrome transcription factor, WSTF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=9.4e-08  Score=66.55  Aligned_cols=48  Identities=38%  Similarity=1.007  Sum_probs=41.2

Q ss_pred             CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHH
Q ss_conf             56126688888889899942534778985464557657677557999963031676353
Q 002450          631 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       631 ~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~  689 (920)
                      .|.+|+..+      +++.+|.||.|++.||+.|+++    ++..+|.++||| +.|+.
T Consensus         2 ~C~vC~~~~------~~~~~i~Cd~C~~~~H~~C~~p----~~~~~p~~~W~C-~~C~~   49 (51)
T d1f62a_           2 RCKVCRKKG------EDDKLILCDECNKAFHLFCLRP----ALYEVPDGEWQC-PACQP   49 (51)
T ss_dssp             CCTTTCCSS------CCSCCEECTTTCCEECHHHHCT----TCCSCCSSCCSC-TTTSC
T ss_pred             CCCCCCCCC------CCCCEEECCCCCCCCCCCCCCC----CCCCCCCCCEEC-CCCCC
T ss_conf             995768979------9988788589997897998899----878589979899-28909

>d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Mycothiol synthase MshD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.31  E-value=1.8e-06  Score=58.02  Aligned_cols=80  Identities=13%  Similarity=0.070  Sum_probs=64.6

Q ss_pred             EEEECCEEEEEEEEEEE--CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCE----------EEECCH---HH
Q ss_conf             99448969999999774--7814675333420485577915999999999832149119----------998381---32
Q 002450          792 ILTVNSSVVSAGILRVF--GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKS----------IVLPAA---EE  856 (920)
Q Consensus       792 VLe~~~~iVsaAslrI~--G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~----------LvlpA~---~e  856 (920)
                      +.+.++++|+.+.++..  +...+++-.++|.++|||+|+|++|+..+.+.++..|+..          ++|...   ..
T Consensus       208 ~~~~~g~vvG~~~~~~~~~~~~~~~i~~~~V~p~~RGrGlG~~Ll~~~~~~~~~~g~~~~~~~~~g~~~i~L~V~~~N~~  287 (308)
T d1p0ha_         208 PRERPGRLLGFHWTKVHPDHPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVA  287 (308)
T ss_dssp             -----CCEEEEEEEECCTTSTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHH
T ss_pred             CCCCCCEEEEEEEEEECCCCCCEEEEECCEECHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCHH
T ss_conf             23558738999999974899968999533787888389999999999999999708753033037863799961578999


Q ss_pred             HHHHHHHCCCCEECCH
Q ss_conf             5999783369488296
Q 002450          857 AESIWTDKFGFKKIDP  872 (920)
Q Consensus       857 a~~~Wt~kFGF~~i~~  872 (920)
                      |..+|.+ +||++++.
T Consensus       288 A~~lY~~-~GF~~~~~  302 (308)
T d1p0ha_         288 AVRTYQS-LGFTTYSV  302 (308)
T ss_dssp             HHHHHHH-TTCEEEEE
T ss_pred             HHHHHHH-CCCEEECE
T ss_conf             9999998-89979566

>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Mi2-beta (CHD4)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2.6e-07  Score=63.59  Aligned_cols=48  Identities=33%  Similarity=0.990  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHH
Q ss_conf             56556126688888889899942534778985464557657677557999963031676353
Q 002450          628 ELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       628 e~~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~  689 (920)
                      +.+.|.+|++         ++.+|.||.|++.||+.|+.+    +++.+|.+.||| +.|..
T Consensus         8 ~~~~C~~C~~---------~g~lv~Cd~C~~~~H~~C~~~----~~~~~~~~~W~C-~~C~~   55 (61)
T d1mm2a_           8 HMEFCRVCKD---------GGELLCCDTCPSSYHIHCLNP----PLPEIPNGEWLC-PRCTC   55 (61)
T ss_dssp             SCSSCTTTCC---------CSSCBCCSSSCCCBCSSSSSS----CCSSCCSSCCCC-TTTTT
T ss_pred             CCCCCCCCCC---------CCEEEEECCCCCCCCHHHCCC----CCCCCCCCCEEC-CCCCC
T ss_conf             8689867899---------795888699996076114588----857589976899-78838

>d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase PA4026
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.30  E-value=1.1e-06  Score=59.40  Aligned_cols=85  Identities=11%  Similarity=0.096  Sum_probs=72.3

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEEC-----CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHH---H
Q ss_conf             761999994489699999997747-----81467533342048557791599999999983214911999838132---5
Q 002450          786 GGMYCAILTVNSSVVSAGILRVFG-----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---A  857 (920)
Q Consensus       786 ~GfY~~VLe~~~~iVsaAslrI~G-----~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e---a  857 (920)
                      ..++.++...++++|+.+.+...+     ...++|-.++|.+.+|++|+|+.|+..+++.++..|+.++++.+...   +
T Consensus        47 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~~~V~~~~r~~Gig~~Ll~~~~~~ak~~g~~~i~l~~~~~N~~a  126 (153)
T d2euia1          47 SVIYLALADEEDRLLGFCQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVA  126 (153)
T ss_dssp             SEEEEEECSSSCCEEEEEEEEEEEETTTTEEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHH
T ss_pred             CCEEEEEEECCCEEEEEEEEECCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHH
T ss_conf             80999999629939999853023343345646775240044203674213679998765677764043157763887999


Q ss_pred             HHHHHHCCCCEECC
Q ss_conf             99978336948829
Q 002450          858 ESIWTDKFGFKKID  871 (920)
Q Consensus       858 ~~~Wt~kFGF~~i~  871 (920)
                      ..+|.+ +||....
T Consensus       127 ~~~Y~k-~GF~~~~  139 (153)
T d2euia1         127 QKVYES-IGFREDQ  139 (153)
T ss_dssp             HHHHHT-TTCBCCC
T ss_pred             HHHHHH-CCCEECC
T ss_conf             999998-8999924

>d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase PA4794
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.27  E-value=9.7e-06  Score=53.18  Aligned_cols=100  Identities=12%  Similarity=0.161  Sum_probs=75.6

Q ss_pred             EEEEEECCEEEEEEEEEE-ECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH-CCCCEEEEC---CHHHHHHHHHHC
Q ss_conf             999944896999999977-478146753334204855779159999999998321-491199983---813259997833
Q 002450          790 CAILTVNSSVVSAGILRV-FGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSF-LRVKSIVLP---AAEEAESIWTDK  864 (920)
Q Consensus       790 ~~VLe~~~~iVsaAslrI-~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~-LgVe~Lvlp---A~~ea~~~Wt~k  864 (920)
                      ..|++.++++|+.+.+.. ...+.+++-.+++.++|||||+|+.|+..+++.+.+ .+++.+++.   .-..+..+|.+ 
T Consensus        52 ~~v~~~~g~~vG~~~~~~~~~~~~~~i~~~~V~p~~rgkGig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k-  130 (160)
T d2i6ca1          52 STVAVHDGQVLGFANFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQ-  130 (160)
T ss_dssp             EEEEEETTEEEEEEEEEEEETTTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHH-
T ss_pred             EEEEEECCEEEEEEEEECCCCCCEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH-
T ss_conf             6999999999998633101468879987767487672974034566778889987445421012012122102568984-


Q ss_pred             CCCEECCHHHHHHHHHHCCCEEEECCC----CEEEECCCC
Q ss_conf             694882967899998717540233486----102311247
Q 002450          865 FGFKKIDPELLSIYRKRCSQLVTFKGT----SMLQKRVPA  900 (920)
Q Consensus       865 FGF~~i~~~el~~~~~~~~~~~~F~Gt----s~LqK~L~~  900 (920)
                      +||+++...+.          ....|.    ++|+|+|.+
T Consensus       131 ~GF~~~~~~~~----------~~~~g~~~~~~~m~k~l~p  160 (160)
T d2i6ca1         131 LGYQPRAIAER----------HDPDGRRVALIQMDKPLEP  160 (160)
T ss_dssp             TTCEEEEEEEE----------ECTTSCEEEEEEEEEECCC
T ss_pred             CCCEEEEEEEE----------ECCCCCEEEEEEEEEECCC
T ss_conf             89989889996----------5699989899999621798

>d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Diamine acetyltransferase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=2.5e-06  Score=57.11  Aligned_cols=81  Identities=14%  Similarity=0.063  Sum_probs=67.0

Q ss_pred             EEECCEEEEEEEEEEEC----CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH---HHHHHHHHCC
Q ss_conf             94489699999997747----8146753334204855779159999999998321491199983813---2599978336
Q 002450          793 LTVNSSVVSAGILRVFG----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWTDKF  865 (920)
Q Consensus       793 Le~~~~iVsaAslrI~G----~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~Wt~kF  865 (920)
                      ...++.+|+.+.+....    .....+-.+.+.+.|||||+|+.||..+++.+...|+.++++....   .+..+|.+ +
T Consensus        63 ~~~~~~ivG~~~~~~~~~~~~~~~~~i~~l~v~~~~rg~Gig~~L~~~l~~~a~~~g~~~i~l~v~~~N~~A~~fY~k-~  141 (167)
T d2b5ga1          63 TPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKR-R  141 (167)
T ss_dssp             CTTCCCEEEEEEEEEEEETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHT-T
T ss_pred             EEECCEEEEEEEEEEECCCCCCCCEECCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH-C
T ss_conf             842892999999995035455531010004440001258973354665654310368543465646686999999998-7


Q ss_pred             CCEECCHHH
Q ss_conf             948829678
Q 002450          866 GFKKIDPEL  874 (920)
Q Consensus       866 GF~~i~~~e  874 (920)
                      ||+.+.+.+
T Consensus       142 GF~~~~~~~  150 (167)
T d2b5ga1         142 GASDLSSEE  150 (167)
T ss_dssp             TCEEHHHHH
T ss_pred             CCEECCEEC
T ss_conf             999984753

>d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Diamine acetyltransferase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=8.1e-06  Score=53.71  Aligned_cols=80  Identities=13%  Similarity=0.122  Sum_probs=64.7

Q ss_pred             EECCEEEEEEEEEEE----CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCH---HHHHHHHHHCCC
Q ss_conf             448969999999774----7814675333420485577915999999999832149119998381---325999783369
Q 002450          794 TVNSSVVSAGILRVF----GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAA---EEAESIWTDKFG  866 (920)
Q Consensus       794 e~~~~iVsaAslrI~----G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~---~ea~~~Wt~kFG  866 (920)
                      ..++.+++.+.+...    ..+.+++-.+.+.++|||||+|+.|+..+++.++..|++++.+.+.   +.+..+|.+ +|
T Consensus        64 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k-~G  142 (167)
T d2beia1          64 LLGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKA-LG  142 (167)
T ss_dssp             --CCEEEEEEEEEEEEETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHH-TT
T ss_pred             EECCEEEEEEEEECCCCCCCCCCEECCCEECCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHH-CC
T ss_conf             54012214788640222136662010221347765599843326898999975201344310344378999999998-79


Q ss_pred             CEECCHHH
Q ss_conf             48829678
Q 002450          867 FKKIDPEL  874 (920)
Q Consensus       867 F~~i~~~e  874 (920)
                      |+.+++.+
T Consensus       143 F~~~~~~~  150 (167)
T d2beia1         143 AQDLTEAE  150 (167)
T ss_dssp             CEEHHHHH
T ss_pred             CEECCEEC
T ss_conf             99953705

>d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein MW0638
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.12  E-value=5.2e-06  Score=54.97  Aligned_cols=61  Identities=13%  Similarity=0.048  Sum_probs=54.1

Q ss_pred             EEEEEEECCEEEEEEEEEEE-CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             99999448969999999774-78146753334204855779159999999998321491199
Q 002450          789 YCAILTVNSSVVSAGILRVF-GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSI  849 (920)
Q Consensus       789 Y~~VLe~~~~iVsaAslrI~-G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~L  849 (920)
                      .+.|.+.++++||.+.+++. ....+++-.++++++|||||+|++||..+++.++..|+.+|
T Consensus        54 ~~~va~~~~~ivG~~~~~~~~~~~~~~i~~l~V~~~~RgkGiG~~Ll~~~~~~a~~~g~~~i  115 (118)
T d2aj6a1          54 KIYIYENEGQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRI  115 (118)
T ss_dssp             EEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCC
T ss_pred             EEEEEEECCEEEEEEEECCCCCCCEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCCEE
T ss_conf             89999989999998631123678839998999843044699999999999999998099989

>d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: Hypothetical protein cg14615-pa
domain: Hypothetical protein cg14615-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.10  E-value=2.8e-06  Score=56.80  Aligned_cols=79  Identities=10%  Similarity=0.072  Sum_probs=61.7

Q ss_pred             EEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHH---HHHHHHHCCC
Q ss_conf             9999448969999999774781467533342048557791599999999983214911999838132---5999783369
Q 002450          790 CAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---AESIWTDKFG  866 (920)
Q Consensus       790 ~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e---a~~~Wt~kFG  866 (920)
                      .++...+|++|+.+..    .+.++|-.++|.++|||+|+|++|+.++++.++..|+..+.+...++   +..+|.+ +|
T Consensus       207 gl~~~e~G~lv~w~~~----~~~g~l~~l~V~p~~r~~G~g~~l~~~~~~~~~~~g~~~v~~~v~~~N~~s~~ly~k-lG  281 (297)
T d1sqha_         207 GICRSDTGELIAWIFQ----NDFSGLGMLQVLPKAERRGLGGLLAAAMSREIARGEEITLTAWIVATNWRSEALLKR-IG  281 (297)
T ss_dssp             EEEETTTCCEEEEEEE----CTTSSEEEEEECGGGCSSSHHHHHHHHHHHHHHHHSCSCEEEEEETTCHHHHHHHHH-HT
T ss_pred             EEEECCCCCEEEEEEE----CCCEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH-CC
T ss_conf             9999899989999998----898799999999676699899999999999999879988999995896999999998-89


Q ss_pred             CEECCHH
Q ss_conf             4882967
Q 002450          867 FKKIDPE  873 (920)
Q Consensus       867 F~~i~~~  873 (920)
                      |++++..
T Consensus       282 F~~~~~~  288 (297)
T d1sqha_         282 YQKDLVN  288 (297)
T ss_dssp             CEEEEEE
T ss_pred             CEEEEEE
T ss_conf             9894278

>d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Histone acetyltransferase HPA2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.10  E-value=1.1e-05  Score=52.88  Aligned_cols=75  Identities=12%  Similarity=0.071  Sum_probs=64.9

Q ss_pred             EECCEEEEEEEEEEEC-----CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH---HHHHHHHHCC
Q ss_conf             4489699999997747-----8146753334204855779159999999998321491199983813---2599978336
Q 002450          794 TVNSSVVSAGILRVFG-----QEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE---EAESIWTDKF  865 (920)
Q Consensus       794 e~~~~iVsaAslrI~G-----~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~---ea~~~Wt~kF  865 (920)
                      +.++.+|+.+.+....     ...+.|-.+++.+++||+|+|++|+..+++.++..|+.++++.+.+   .|+.+|.+ +
T Consensus        58 ~~~~~ivg~~~~~~~~~~~~~~~~~~l~~l~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k-~  136 (150)
T d1qsma_          58 SSSEKIIGMINFFNHMTTWDFKDKIYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVK-V  136 (150)
T ss_dssp             SSSCCEEEEEEEEEECCTTCSSCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHH-H
T ss_pred             HHCCCEEEEEEEEECCCCCCCCCHHEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHH-C
T ss_conf             203817999878621322346520010011210013574078888877874300122455246884477999999998-4


Q ss_pred             CCEE
Q ss_conf             9488
Q 002450          866 GFKK  869 (920)
Q Consensus       866 GF~~  869 (920)
                      ||..
T Consensus       137 GFk~  140 (150)
T d1qsma_         137 GYKA  140 (150)
T ss_dssp             EEEC
T ss_pred             CCCC
T ss_conf             9987

>d2ge3a1 d.108.1.1 (A:6-169) Probable acetyltransferase Atu2290 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2290
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.09  E-value=1.4e-05  Score=52.07  Aligned_cols=80  Identities=14%  Similarity=0.134  Sum_probs=64.6

Q ss_pred             EEEEECCEEEEEEEEEEECC----EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHH---HHHHHHH
Q ss_conf             99944896999999977478----1467533342048557791599999999983214911999838132---5999783
Q 002450          791 AILTVNSSVVSAGILRVFGQ----EVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE---AESIWTD  863 (920)
Q Consensus       791 ~VLe~~~~iVsaAslrI~G~----~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~e---a~~~Wt~  863 (920)
                      .+...++++|+.+.+.....    ..+++- +++.++|||||+|+.|+..+++.+..+|++++.+-+.++   +..+|.+
T Consensus        56 ~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~-~~v~~~~rg~Gig~~l~~~~~~~a~~~~~~~i~~~v~~~N~~s~~~y~k  134 (164)
T d2ge3a1          56 FVAIADGDVIGWCDIRRQDRATRAHCGTLG-MGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEK  134 (164)
T ss_dssp             EEEEETTEEEEEEEEEECCSTTTTTEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHH
T ss_pred             EEEEECCEEEEEEEEECCCCCCCCCEEEEE-EEECHHHCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             999999999999985011367767079999-9967456211012210000111000122212222357126899999998


Q ss_pred             CCCCEECCH
Q ss_conf             369488296
Q 002450          864 KFGFKKIDP  872 (920)
Q Consensus       864 kFGF~~i~~  872 (920)
                       +||...+.
T Consensus       135 -~GF~~~g~  142 (164)
T d2ge3a1         135 -IGFAHEGR  142 (164)
T ss_dssp             -HTCEEEEE
T ss_pred             -CCCEEEEE
T ss_conf             -89999989

>d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein SA2309
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.08  E-value=7.6e-06  Score=53.90  Aligned_cols=74  Identities=12%  Similarity=0.126  Sum_probs=61.3

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHC
Q ss_conf             7619999944896999999977478146753334204855779159999999998321491199983813259997833
Q 002450          786 GGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDK  864 (920)
Q Consensus       786 ~GfY~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~k  864 (920)
                      ..||.+  ..+|++|+++.++..+.+.+||..++|.+++||||+|++|+.++++.++..|.+  ++|.-+-+. -|..|
T Consensus        11 ~~f~v~--~~~g~~vg~~~~~~~~~~~~~i~~~~V~p~~RG~Gig~~Lv~~~l~~Ar~~g~k--vvp~c~y~~-~~~~k   84 (102)
T d1r57a_          11 NKFYIG--DDENNALAEITYRFVDNNEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLK--IIASCSFAK-HMLEK   84 (102)
T ss_dssp             TEEEEE--SSSTTEEEEEEEEESSSSEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTCE--EEESSHHHH-HHHHH
T ss_pred             CEEEEE--EECCCEEEEEEEEECCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCE--EEEECHHHH-HHHHH
T ss_conf             789999--948960799999982799899999998967779548999999999999888989--999667589-99886

>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein 22
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=6e-07  Score=61.21  Aligned_cols=55  Identities=24%  Similarity=0.716  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHH
Q ss_conf             556126688888889899942534778985464557657677557999963031676353
Q 002450          630 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       630 ~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~  689 (920)
                      ..|.+|++.+..    +.+.||.||.|.+.||..|+.|.....+...|.+.||| +.|..
T Consensus        17 ~~C~iC~~~~~~----~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C-~~C~~   71 (88)
T d1weva_          17 LACVVCRQMTVA----SGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYC-ARCTR   71 (88)
T ss_dssp             CSCSSSCCCCCC----TTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCC-HHHHH
T ss_pred             CCCCCCCCCCCC----CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC-CCCCC
T ss_conf             992578990678----99968884899974561127985554334558983899-44573

>d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PA3270
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.46  E-value=0.00096  Score=39.97  Aligned_cols=83  Identities=16%  Similarity=0.189  Sum_probs=66.0

Q ss_pred             EEEEEEECCEEEEEEEEEEE--CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH-HHCCCCEEEECCHHH--H-HHHHH
Q ss_conf             99999448969999999774--781467533342048557791599999999983-214911999838132--5-99978
Q 002450          789 YCAILTVNSSVVSAGILRVF--GQEVAELPLVATSKINHGKGYFQLLFACIEKLL-SFLRVKSIVLPAAEE--A-ESIWT  862 (920)
Q Consensus       789 Y~~VLe~~~~iVsaAslrI~--G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L-~~LgVe~LvlpA~~e--a-~~~Wt  862 (920)
                      |.++...++++||.+.+.-+  ....|||-.+...++|||+|+++..+..+.+.+ ..+|+.++.+.+.++  + ...+.
T Consensus        59 ~~~~i~~~g~~iG~i~l~~~~~~~~~~eiG~~~l~~~~~g~G~~~ea~~~l~~~af~~lg~~~i~~~v~~~N~aS~~~~~  138 (183)
T d1yrea1          59 LPLAVRLGVQLVGTTRFAEFLPALPACEIGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAID  138 (183)
T ss_dssp             EEEEEEETTEEEEEEEEEEEETTTTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHH
T ss_pred             EEEEEEECCEEEEEEEEEECCCCCCEEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
T ss_conf             59999999999999996621366986999999955877297611457888753324215863177542547888885675


Q ss_pred             HCCCCEECCH
Q ss_conf             3369488296
Q 002450          863 DKFGFKKIDP  872 (920)
Q Consensus       863 ~kFGF~~i~~  872 (920)
                       |+||...+.
T Consensus       139 -k~Gf~~eg~  147 (183)
T d1yrea1         139 -KLGAQREGV  147 (183)
T ss_dssp             -HHTCEEEEE
T ss_pred             -CCCEEEEEE
T ss_conf             -067479999

>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD Inhibitor of growth protein 2, Ing2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=4.4e-05  Score=48.81  Aligned_cols=45  Identities=38%  Similarity=0.947  Sum_probs=32.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEEC--CCCCC-CCCCCCCCCCCCCCCCCCCCCCEEECCCCHH
Q ss_conf             556126688888889899942534--77898-5464557657677557999963031676353
Q 002450          630 SGCLLCRGCDFSKSGFGPRTILLC--DQCER-EFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       630 ~~C~VC~~~d~~~Sgf~~~~ILlC--DQCer-~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~  689 (920)
                      ..| ||++.+       .+.++.|  +.|.. .||..|+.      |+..|.++||| +.|+.
T Consensus        17 ~~C-iC~~~~-------~~~~i~c~~~~C~~~wfH~~Cvg------l~~~p~~~w~C-~~C~~   64 (71)
T d1wesa_          17 TYC-LCNQVS-------YGEMIGCDNEQCPIEWFHFSCVS------LTYKPKGKWYC-PKCRG   64 (71)
T ss_dssp             CCS-TTCCCC-------CSSEECCSCTTCSCCCEETTTTT------CSSCCSSCCCC-TTTSS
T ss_pred             CEE-EECCCC-------CCCEEEEECCCCCCCCCCCCCCC------CCCCCCCCEEC-CCCCC
T ss_conf             877-828977-------89877887889999685485478------98479985899-68866

>d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase YdaF
species: Bacillus subtilis [TaxId: 1423]

Probab=97.40  E-value=0.0012  Score=39.21  Aligned_cols=84  Identities=17%  Similarity=0.151  Sum_probs=65.2

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEE--CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH-HHCCCCEEEECCHHH---HHH
Q ss_conf             76199999448969999999774--781467533342048557791599999999983-214911999838132---599
Q 002450          786 GGMYCAILTVNSSVVSAGILRVF--GQEVAELPLVATSKINHGKGYFQLLFACIEKLL-SFLRVKSIVLPAAEE---AES  859 (920)
Q Consensus       786 ~GfY~~VLe~~~~iVsaAslrI~--G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L-~~LgVe~LvlpA~~e---a~~  859 (920)
                      .+++.++ ..++++||.+.+.-.  ....||+- +.+.+++||+|++..++..+.+.+ ..+++.++.+...+.   +..
T Consensus        67 ~~~~~~~-~~~~~~iG~~~~~~~~~~~~~~eig-~~i~~~~~g~G~~~e~~~~~~~~af~~~~~~~i~~~v~~~N~~s~~  144 (180)
T d1nsla_          67 NGIEAGL-LYDGSLCGMISLHNLDQVNRKAEIG-YWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRA  144 (180)
T ss_dssp             SCEEEEE-EETTEEEEEEEEEEEETTTTEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHH
T ss_pred             CCEEEEE-EECCCEEEEEEEEECCCCCCEEEEE-EEECCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHH
T ss_conf             7579999-9889289999853114678858887-7613220111210356666520121335751010002446688999


Q ss_pred             HHHHCCCCEECCH
Q ss_conf             9783369488296
Q 002450          860 IWTDKFGFKKIDP  872 (920)
Q Consensus       860 ~Wt~kFGF~~i~~  872 (920)
                      ++.+ +||+..+.
T Consensus       145 ~~~k-~GF~~eg~  156 (180)
T d1nsla_         145 VPER-IGFLEEGK  156 (180)
T ss_dssp             HHHH-HTCEEEEE
T ss_pred             HHHH-CCCEEEEE
T ss_conf             9998-89899999

>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein At1g33420
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.39  E-value=4.4e-05  Score=48.83  Aligned_cols=49  Identities=24%  Similarity=0.599  Sum_probs=37.4

Q ss_pred             CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHH
Q ss_conf             561266888888898999425347789854645576576775579999630316763537
Q 002450          631 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI  690 (920)
Q Consensus       631 ~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~I  690 (920)
                      .| +|+..+.     +...+|.|++|++.||..|+..    +....+.++|+| +.|...
T Consensus        18 ~C-~C~~~~~-----~~~~mv~Cd~C~~w~H~~C~g~----~~~~~~~~~~~C-~~C~~~   66 (72)
T d1weea_          18 DC-KCGTKDD-----DGERMLACDGCGVWHHTRCIGI----NNADALPSKFLC-FRCIEL   66 (72)
T ss_dssp             CC-TTCCCSC-----CSSCEEECSSSCEEEETTTTTC----CTTSCCCSCCCC-HHHHHH
T ss_pred             EE-ECCCCCC-----CCCEEEEECCCCCCCCHHHCCC----CCCCCCCCCEEC-CCCCCC
T ss_conf             70-6899848-----9986989599998395512697----624589976999-288581

>d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine acetyltransferase RimL {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: L7/L12-Ribosomal-protein-serine acetyltransferase RimL
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.35  E-value=0.0016  Score=38.48  Aligned_cols=82  Identities=6%  Similarity=0.042  Sum_probs=63.4

Q ss_pred             EEEEEEECCEEEEEEEEEEEC--CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH-HHCCCCEEEECCHHH---HHHHHH
Q ss_conf             999994489699999997747--81467533342048557791599999999983-214911999838132---599978
Q 002450          789 YCAILTVNSSVVSAGILRVFG--QEVAELPLVATSKINHGKGYFQLLFACIEKLL-SFLRVKSIVLPAAEE---AESIWT  862 (920)
Q Consensus       789 Y~~VLe~~~~iVsaAslrI~G--~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L-~~LgVe~LvlpA~~e---a~~~Wt  862 (920)
                      +..++..++++|+.+.++...  ...+|+.. .+.++|||||+++.++..+.+.+ ..++++++.+.+.++   +..++.
T Consensus        66 ~~~~i~~~~~~iG~~~~~~~~~~~~~~eig~-~i~~~~~gkG~~~ea~~~l~~~~f~~~~~~~l~a~~~~~N~~S~~~~~  144 (174)
T d1s7ka1          66 KMYLIFCQNEMAGVLSFNAIEPINKAAYIGY-WLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVAR  144 (174)
T ss_dssp             EEEEEEETTEEEEEEEEEEEETTTTEEEEEE-EECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHH
T ss_pred             CEEEEEECCCCEEEEEECCCCCCCCEEEEEE-EEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHH
T ss_conf             1567997697147884010058888699999-996000332157899988875423203754102014557499999999


Q ss_pred             HCCCCEECCH
Q ss_conf             3369488296
Q 002450          863 DKFGFKKIDP  872 (920)
Q Consensus       863 ~kFGF~~i~~  872 (920)
                      + +||+..+.
T Consensus       145 k-~Gf~~eG~  153 (174)
T d1s7ka1         145 R-NHFTLEGC  153 (174)
T ss_dssp             H-TTCEEEEE
T ss_pred             H-CCCEEEEE
T ss_conf             8-79999999

>d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Mycothiol synthase MshD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.19  E-value=0.00071  Score=40.83  Aligned_cols=81  Identities=6%  Similarity=-0.097  Sum_probs=58.6

Q ss_pred             CEEEEEEEECCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH-HHHHHHHHCC
Q ss_conf             619999944896999999977478146753334204855779159999999998321491199983813-2599978336
Q 002450          787 GMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAE-EAESIWTDKF  865 (920)
Q Consensus       787 GfY~~VLe~~~~iVsaAslrI~G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L~~LgVe~LvlpA~~-ea~~~Wt~kF  865 (920)
                      .+..++.+.++++|+.+.+...+.....+-.+.+.++|||+|+|+.|+..++..+...+...+  .... ....+.. ++
T Consensus        47 ~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~~~~V~P~~R~~GiG~~Ll~~~~~~~~~~~~~~v--~~~~~~~~~~~~-~~  123 (308)
T d1p0ha_          47 HLLVAGSRPGGPIIGYLNLSPPRGAGGAMAELVVHPQSRRRGIGTAMARAALAKTAGRNQFWA--HGTLDPARATAS-AL  123 (308)
T ss_dssp             EEEEECSSTTCCEEEEEEEECC---CCCEEEEEECGGGCSSSHHHHHHHHHHHHTTTCCEEEE--GGGCHHHHHHHH-HT
T ss_pred             CEEEEEEECCCEEEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHHCCCEE--CCCCHHHHHHHH-HC
T ss_conf             269999921997999999993278751589888887871677999999999998754144122--046356688888-52


Q ss_pred             CCEEC
Q ss_conf             94882
Q 002450          866 GFKKI  870 (920)
Q Consensus       866 GF~~i  870 (920)
                      ||...
T Consensus       124 ~~~~~  128 (308)
T d1p0ha_         124 GLVGV  128 (308)
T ss_dssp             TCEEE
T ss_pred             CCCCC
T ss_conf             34321

>d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: Autoinducer synthetase
domain: Autoinducer synthesis protein LasI
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.05  E-value=0.0081  Score=33.82  Aligned_cols=95  Identities=12%  Similarity=0.122  Sum_probs=71.1

Q ss_pred             CCCCCCCEECCEEEEEEEECCEEEEEEEEEE---------------------ECCEEEEEEEEEECCCCCCCC----HHH
Q ss_conf             4468973217619999944896999999977---------------------478146753334204855779----159
Q 002450          777 GRNLRGQEFGGMYCAILTVNSSVVSAGILRV---------------------FGQEVAELPLVATSKINHGKG----YFQ  831 (920)
Q Consensus       777 g~~~~r~~f~GfY~~VLe~~~~iVsaAslrI---------------------~G~~vAEiPlvAT~~~yrrqG----~gr  831 (920)
                      +.+..+.|...-+..+...++++|+++-+..                     .+..++|+--+|+.+++++++    +..
T Consensus        43 g~E~D~~D~~~~~~lv~~~~g~~vG~~Rl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~E~sR~aV~~~~r~~~r~~~~~~  122 (197)
T d1ro5a_          43 EMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHGKEAPCSPHIWELSRFAINSGQKGSLGFSDCTL  122 (197)
T ss_dssp             TEECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTTCCCCCCTTEEEEEEEEECCSTTCCSCSHHHHH
T ss_pred             CCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHH
T ss_conf             54366678855388885046614799985048888753230403305755457886599998998042012442339999


Q ss_pred             HHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCC--EECCH
Q ss_conf             999999998321491199983813259997833694--88296
Q 002450          832 LLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGF--KKIDP  872 (920)
Q Consensus       832 ~Lv~~IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF--~~i~~  872 (920)
                      .|+.++.+.....|++.++.-+.+.+..+|.+ +||  +++++
T Consensus       123 ~L~~~~~~~a~~~G~~~~~~~~~~~~~r~~~r-~G~~~~~~G~  164 (197)
T d1ro5a_         123 EAMRALARYSLQNDIQTLVTVTTVGVEKMMIR-AGLDVSRFGP  164 (197)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEEEHHHHHHHHH-TTCEEEESSC
T ss_pred             HHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH-CCCCEEECCC
T ss_conf             99999999999879989999932899999998-7994797688

>d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative ribosomal-protein-serine acetyltransferase VC1889
species: Vibrio cholerae [TaxId: 666]

Probab=97.01  E-value=0.0019  Score=38.06  Aligned_cols=80  Identities=11%  Similarity=0.142  Sum_probs=62.0

Q ss_pred             EEEE-ECCEEEEEEEEEEE--CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH-HHCCCCEEEECCHHH---HHHHHHH
Q ss_conf             9994-48969999999774--781467533342048557791599999999983-214911999838132---5999783
Q 002450          791 AILT-VNSSVVSAGILRVF--GQEVAELPLVATSKINHGKGYFQLLFACIEKLL-SFLRVKSIVLPAAEE---AESIWTD  863 (920)
Q Consensus       791 ~VLe-~~~~iVsaAslrI~--G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L-~~LgVe~LvlpA~~e---a~~~Wt~  863 (920)
                      +|.. .++++||.+.+.-+  ....+|+- +.+.++|||+|+++.++..+.+.+ ..++++++.+.+.++   +..++.+
T Consensus        71 ~i~~~~~~~~iG~~~l~~~~~~~~~~eig-~~i~~~~~g~G~~~e~l~~l~~~af~~~~~~~i~~~~~~~N~~s~~l~ek  149 (178)
T d2fcka1          71 GVFERQTQTLVGMVAINEFYHTFNMASLG-YWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALR  149 (178)
T ss_dssp             EEEETTTCCEEEEEEEEEEEGGGTEEEEE-EEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHH
T ss_pred             EEEECCCCCEEEEEEECCCCCCCCEEEEE-EEEECCCCCCHHHHHHHHEEEEEECCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf             76510179269997502456677758887-76411223310234442055334014467403567637783999999998


Q ss_pred             CCCCEECCH
Q ss_conf             369488296
Q 002450          864 KFGFKKIDP  872 (920)
Q Consensus       864 kFGF~~i~~  872 (920)
                       +||+..+.
T Consensus       150 -~GF~~eg~  157 (178)
T d2fcka1         150 -CGANREQL  157 (178)
T ss_dssp             -TTCEEEEE
T ss_pred             -CCCEEEEE
T ss_conf             -89999999

>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD Inhibitor of growth protein 2, Ing2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.82  E-value=0.00023  Score=44.05  Aligned_cols=37  Identities=41%  Similarity=0.877  Sum_probs=29.2

Q ss_pred             CCCCCCCCCCCCCCCC-HHCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             8982018779866743-00000112445788999855811000
Q 002450          544 GLGIICHCCNSEVSPS-QFEAHAECASLSSIPQGDWYCKYCQN  585 (920)
Q Consensus       544 g~GI~CdCCn~evsPS-~FEaHA~CL~LesIPsGdW~Cp~C~~  585 (920)
                      ++.|.|+|++   |+. -|  |..|++|..+|+++|||+.|+.
T Consensus        27 ~~~i~c~~~~---C~~~wf--H~~Cvgl~~~p~~~w~C~~C~~   64 (71)
T d1wesa_          27 GEMIGCDNEQ---CPIEWF--HFSCVSLTYKPKGKWYCPKCRG   64 (71)
T ss_dssp             SSEECCSCTT---CSCCCE--ETTTTTCSSCCSSCCCCTTTSS
T ss_pred             CCEEEEECCC---CCCCCC--CCCCCCCCCCCCCCEECCCCCC
T ss_conf             9877887889---999685--4854789847998589968866

>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Inhibitor of growth protein 4, Ing4
species: Homo sapiens [TaxId: 9606]

Probab=96.80  E-value=0.00018  Score=44.75  Aligned_cols=44  Identities=41%  Similarity=1.016  Sum_probs=31.1

Q ss_pred             CCCCCCCCCCCCCCCCCCCEEECCC--C-CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHH
Q ss_conf             5612668888888989994253477--8-985464557657677557999963031676353
Q 002450          631 GCLLCRGCDFSKSGFGPRTILLCDQ--C-EREFHVGCLKKHKMADLRELPKGKWFCCMDCSR  689 (920)
Q Consensus       631 ~C~VC~~~d~~~Sgf~~~~ILlCDQ--C-er~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~  689 (920)
                      .| +|++.+       .+.+|.|+.  | ...||..|+.      +.+.|.++||| +.|.+
T Consensus         4 yC-~C~~~~-------~~~mi~Cd~~~C~~~WfH~~Cvg------l~~~p~~~w~C-~~C~~   50 (51)
T d2pnxa1           4 YC-LCHQVS-------YGEMIGCDNPDCSIEWFHFACVG------LTTKPRGKWFC-PRCSQ   50 (51)
T ss_dssp             ET-TTTEEC-------CSEEEECSCTTCSSCEEEGGGGT------CSSCCSSCCCC-HHHHC
T ss_pred             EE-ECCCCC-------CCCEEEEECCCCCCCCEECCCCC------CCCCCCCCEEC-CCCCC
T ss_conf             78-817978-------89898885679998779287648------88479986999-37779

>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Nuclear corepressor KAP-1 (TIF-1beta)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00031  Score=43.25  Aligned_cols=36  Identities=31%  Similarity=0.872  Sum_probs=30.0

Q ss_pred             CCCCCCCCCCCCCCCCCHHCCCCCCCC--CCCCCCCCCCCCCCHH
Q ss_conf             189820187798667430000011244--5788999855811000
Q 002450          543 NGLGIICHCCNSEVSPSQFEAHAECAS--LSSIPQGDWYCKYCQN  585 (920)
Q Consensus       543 tg~GI~CdCCn~evsPS~FEaHA~CL~--LesIPsGdW~Cp~C~~  585 (920)
                      .++.|+|+.|+     ..|  |..|++  +..+|.++|+|+.|..
T Consensus        16 ~~~ll~Cd~C~-----~~~--H~~C~~p~l~~~p~~~W~C~~C~~   53 (70)
T d1fp0a1          16 PGDLVMCNQCE-----FCF--HLDCHLPALQDVPGEEWSCSLCHV   53 (70)
T ss_dssp             SSCCEECTTSS-----CEE--CTTSSSTTCCCCCSSSCCCCSCCC
T ss_pred             CCEEEECCCCC-----HHH--CCCCCCCCCCCCCCCCEECCCCCC
T ss_conf             69788899999-----156--351489986848898989967948

>d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein Rv1347c/MT1389
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.75  E-value=0.0063  Score=34.57  Aligned_cols=88  Identities=13%  Similarity=-0.035  Sum_probs=66.0

Q ss_pred             CEEEEEEEECCEEEEEEEEEEE-----------CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH--HHCCCCEEEECC
Q ss_conf             6199999448969999999774-----------781467533342048557791599999999983--214911999838
Q 002450          787 GMYCAILTVNSSVVSAGILRVF-----------GQEVAELPLVATSKINHGKGYFQLLFACIEKLL--SFLRVKSIVLPA  853 (920)
Q Consensus       787 GfY~~VLe~~~~iVsaAslrI~-----------G~~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~L--~~LgVe~LvlpA  853 (920)
                      ..+..+++.++..++...+...           +..-+++-.+...++|||||||+.++.++.+.+  ..+++.+|++..
T Consensus        81 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GkG~gt~~l~~li~~~f~~~~~~~ri~~~v  160 (198)
T d1yk3a1          81 YSLPLIGSWHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDP  160 (198)
T ss_dssp             SEEEEEEEETTEEEEEEEEEEGGGBGGGGSSCCCTTCEEEEEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECC
T ss_pred             CCCEEEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             54207999999788999998226651011101588854899999785553875899999999999975368940999983


Q ss_pred             HHH---HHHHHHHCCCCEECCHHHH
Q ss_conf             132---5999783369488296789
Q 002450          854 AEE---AESIWTDKFGFKKIDPELL  875 (920)
Q Consensus       854 ~~e---a~~~Wt~kFGF~~i~~~el  875 (920)
                      ..+   +...+.+ +||+.+++-++
T Consensus       161 ~~~N~~s~rl~er-lGF~~~ge~d~  184 (198)
T d1yk3a1         161 DHRNTATRRLCEW-AGCKFLGEHDT  184 (198)
T ss_dssp             BTTCHHHHHHHHH-HTCEEEEEEEC
T ss_pred             CCCCHHHHHHHHH-CCCEEEEEEEC
T ss_conf             7889999999998-69989868946

>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein At5g26210
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.73  E-value=0.00031  Score=43.21  Aligned_cols=51  Identities=25%  Similarity=0.458  Sum_probs=37.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC-CCCCEEECCCCHHH
Q ss_conf             55612668888888989994253477898546455765767755799-99630316763537
Q 002450          630 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLREL-PKGKWFCCMDCSRI  690 (920)
Q Consensus       630 ~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~ei-P~g~WFC~~~C~~I  690 (920)
                      ..|.+|++.+-     ++..+|.||.|...||..|+..    +.... +..+|+| +.|...
T Consensus         7 ~~C~~C~~~~~-----~~~~~I~Cd~C~~w~H~~C~~~----~~~~~~~~~~w~C-~~C~~~   58 (64)
T d1we9a_           7 GQCGACGESYA-----ADEFWICCDLCEMWFHGKCVKI----TPARAEHIKQYKC-PSCSNK   58 (64)
T ss_dssp             CCCSSSCCCCC-----SSSCEEECSSSCCEEETTTTTC----CTTGGGGCSSCCC-HHHHTT
T ss_pred             CCCCCCCCCCC-----CCCCEEECCCCCCCCCCCCCCC----CHHHCCCCCEEEC-CCCCCC
T ss_conf             81848699779-----9987877489995698045785----8678888980899-689380

>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Mi2-beta (CHD4)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.00066  Score=41.03  Aligned_cols=37  Identities=35%  Similarity=0.942  Sum_probs=30.5

Q ss_pred             CCCCCCCCCCCCCCCCCHHCCCCCCCC--CCCCCCCCCCCCCCHHH
Q ss_conf             189820187798667430000011244--57889998558110002
Q 002450          543 NGLGIICHCCNSEVSPSQFEAHAECAS--LSSIPQGDWYCKYCQNM  586 (920)
Q Consensus       543 tg~GI~CdCCn~evsPS~FEaHA~CL~--LesIPsGdW~Cp~C~~~  586 (920)
                      .++.|.|+.|+.     .|  |..|++  +..+|+++|+|+.|++.
T Consensus        18 ~g~lv~Cd~C~~-----~~--H~~C~~~~~~~~~~~~W~C~~C~~~   56 (61)
T d1mm2a_          18 GGELLCCDTCPS-----SY--HIHCLNPPLPEIPNGEWLCPRCTCP   56 (61)
T ss_dssp             CSSCBCCSSSCC-----CB--CSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred             CCEEEEECCCCC-----CC--CHHHCCCCCCCCCCCCEECCCCCCC
T ss_conf             795888699996-----07--6114588857589976899788384

>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Death associated transcription factor 1, Datf1 (DIO-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.39  E-value=9.6e-05  Score=46.60  Aligned_cols=53  Identities=28%  Similarity=0.664  Sum_probs=36.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCEEECCCCHHH
Q ss_conf             5561266888888898999425347789854645576576-775579999630316763537
Q 002450          630 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHK-MADLRELPKGKWFCCMDCSRI  690 (920)
Q Consensus       630 ~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~-~~~L~eiP~g~WFC~~~C~~I  690 (920)
                      ..| +|++.+      .++.+|.|+.|+..||..|+.-.. ...+...+..+|+| +.|...
T Consensus        17 ~~C-iC~~~~------~~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C-~~C~~~   70 (76)
T d1wema_          17 LYC-ICRQPH------NNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYIC-PNCTIL   70 (76)
T ss_dssp             CCS-TTCCCC------CSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCC-HHHHHH
T ss_pred             CEE-ECCCCC------CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC-CCCCCC
T ss_conf             887-899925------998188879999769951068870101114789981899-798184

>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein 8
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.31  E-value=0.00049  Score=41.87  Aligned_cols=51  Identities=24%  Similarity=0.526  Sum_probs=35.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHH
Q ss_conf             5561266888888898999425347789854645576576775579999630316763537
Q 002450          630 SGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI  690 (920)
Q Consensus       630 ~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~I  690 (920)
                      -.| +|++.+.     .++.+|.||.|+..||..|+....   ......++|+| +.|...
T Consensus        13 v~C-iC~~~~~-----~~~~mI~Cd~C~~W~H~~C~g~~~---~~~~~~~~~~C-~~C~~~   63 (79)
T d1wepa_          13 VYC-LCRQPYN-----VNHFMIECGLCQDWFHGSCVGIEE---ENAVDIDIYHC-PDCEAV   63 (79)
T ss_dssp             CCS-TTSCSCC-----SSSCEEEBTTTCCEEEHHHHTCCH---HHHTTCSBBCC-TTTTTT
T ss_pred             EEE-ECCCCCC-----CCCCEEECCCCCCCEECCCCCCCH---HCCCCCCEEEC-CCCCCC
T ss_conf             684-8989659-----998688899899739603417451---02787877899-567387

>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Williams-Beuren syndrome transcription factor, WSTF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.00092  Score=40.09  Aligned_cols=36  Identities=36%  Similarity=0.889  Sum_probs=29.8

Q ss_pred             CCCCCCCCCCCCCCCCCHHCCCCCCCCC--CCCCCCCCCCCCCHH
Q ss_conf             1898201877986674300000112445--788999855811000
Q 002450          543 NGLGIICHCCNSEVSPSQFEAHAECASL--SSIPQGDWYCKYCQN  585 (920)
Q Consensus       543 tg~GI~CdCCn~evsPS~FEaHA~CL~L--esIPsGdW~Cp~C~~  585 (920)
                      .+..|.|+.|+.     .|  |..|+++  ..+|+++|+|+.|+.
T Consensus        12 ~~~~i~Cd~C~~-----~~--H~~C~~p~~~~~p~~~W~C~~C~~   49 (51)
T d1f62a_          12 DDKLILCDECNK-----AF--HLFCLRPALYEVPDGEWQCPACQP   49 (51)
T ss_dssp             CSCCEECTTTCC-----EE--CHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred             CCCEEECCCCCC-----CC--CCCCCCCCCCCCCCCCEECCCCCC
T ss_conf             988788589997-----89--799889987858997989928909

>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Inhibitor of growth protein 4, Ing4
species: Homo sapiens [TaxId: 9606]

Probab=96.00  E-value=0.001  Score=39.86  Aligned_cols=38  Identities=32%  Similarity=0.773  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCCCCCCCC-HHCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             18982018779866743-00000112445788999855811000
Q 002450          543 NGLGIICHCCNSEVSPS-QFEAHAECASLSSIPQGDWYCKYCQN  585 (920)
Q Consensus       543 tg~GI~CdCCn~evsPS-~FEaHA~CL~LesIPsGdW~Cp~C~~  585 (920)
                      .++.|.|++++   |+. -|  |..|+++..+|.|+|||+.|..
T Consensus        12 ~~~mi~Cd~~~---C~~~Wf--H~~Cvgl~~~p~~~w~C~~C~~   50 (51)
T d2pnxa1          12 YGEMIGCDNPD---CSIEWF--HFACVGLTTKPRGKWFCPRCSQ   50 (51)
T ss_dssp             CSEEEECSCTT---CSSCEE--EGGGGTCSSCCSSCCCCHHHHC
T ss_pred             CCCEEEEECCC---CCCCCE--ECCCCCCCCCCCCCEECCCCCC
T ss_conf             89898885679---998779--2876488847998699937779

>d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltranferase Atu2435
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.86  E-value=0.031  Score=29.92  Aligned_cols=87  Identities=11%  Similarity=0.019  Sum_probs=62.5

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEECC-EEEEEEEEEECCCCCCCCHHHHHHHHHHHH-HHHCCCCEEEECCHHH---HHHH
Q ss_conf             7619999944896999999977478-146753334204855779159999999998-3214911999838132---5999
Q 002450          786 GGMYCAILTVNSSVVSAGILRVFGQ-EVAELPLVATSKINHGKGYFQLLFACIEKL-LSFLRVKSIVLPAAEE---AESI  860 (920)
Q Consensus       786 ~GfY~~VLe~~~~iVsaAslrI~G~-~vAEiPlvAT~~~yrrqG~gr~Lv~~IE~~-L~~LgVe~LvlpA~~e---a~~~  860 (920)
                      .++|.+....++.+|+...+..... ..+++ .+...+.|+++|++..++..+... ...+|++++++...++   +..+
T Consensus        60 ~~~~~i~~~~~~~~ig~~~~~~~~~~~~~~~-g~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~v~~~v~~~N~~S~rl  138 (164)
T d2fsra1          60 HGALMIDLGETGECIGQIGINHGPLFPEKEL-GWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAV  138 (164)
T ss_dssp             CCEEEEEETTTTEEEEEEEEECSTTCSSCEE-EEEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHH
T ss_pred             CCEEEEEECCCCEEEEEEEEECCCCCCCCEE-EEEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHH
T ss_conf             6147899758880788887521676665268-567431000133343213378740124540106999998688999999


Q ss_pred             HHHCCCCEECCHHH
Q ss_conf             78336948829678
Q 002450          861 WTDKFGFKKIDPEL  874 (920)
Q Consensus       861 Wt~kFGF~~i~~~e  874 (920)
                      .. |+||+..+...
T Consensus       139 ~e-k~GF~~eg~~~  151 (164)
T d2fsra1         139 AE-RIGGTLDPLAP  151 (164)
T ss_dssp             HH-HTTCEECTTSC
T ss_pred             HH-HCCCEEEEEEC
T ss_conf             99-87999962683

>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein 22
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.29  E-value=0.0024  Score=37.31  Aligned_cols=36  Identities=25%  Similarity=0.739  Sum_probs=28.2

Q ss_pred             CCCCCCCCCCCCCCCCHHCCCCCCCCCC------CCCCCCCCCCCCHHH
Q ss_conf             8982018779866743000001124457------889998558110002
Q 002450          544 GLGIICHCCNSEVSPSQFEAHAECASLS------SIPQGDWYCKYCQNM  586 (920)
Q Consensus       544 g~GI~CdCCn~evsPS~FEaHA~CL~Le------sIPsGdW~Cp~C~~~  586 (920)
                      +..|.|+.|+.     .|  |..|+++.      .+|+++|||+.|...
T Consensus        31 ~~~v~Cd~C~~-----~~--H~~C~~p~~~~~~~~~~~~~W~C~~C~~~   72 (88)
T d1weva_          31 NQLVECQECHN-----LY--HQDCHKPQVTDKEVNDPRLVWYCARCTRQ   72 (88)
T ss_dssp             CCEEECSSSCC-----EE--ETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred             CEEEECCCCCC-----CC--CCCCCCCCCCCCCCCCCCCEEECCCCCCH
T ss_conf             96888489997-----45--61127985554334558983899445733

>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Sumoylation ligase E3, SIZ1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.01  E-value=0.0048  Score=35.32  Aligned_cols=52  Identities=19%  Similarity=0.519  Sum_probs=32.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCCCCCCC--CCCCCEEECCCCHH
Q ss_conf             65561266888888898999425347--789854645576576775579--99963031676353
Q 002450          629 LSGCLLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCLKKHKMADLRE--LPKGKWFCCMDCSR  689 (920)
Q Consensus       629 ~~~C~VC~~~d~~~Sgf~~~~ILlCD--QCer~YHv~CL~p~~~~~L~e--iP~g~WFC~~~C~~  689 (920)
                      ...| +|+..+      ..+.+|.|+  +|...||..|+.-... ++..  .....|+| +.|..
T Consensus        16 ~~~C-~C~~~~------~~~~~i~c~c~~C~~W~H~~Cvgi~~~-~~~~~~~~~~~~~C-~~C~~   71 (78)
T d1wewa_          16 KVRC-VCGNSL------ETDSMIQCEDPRCHVWQHVGCVILPDK-PMDGNPPLPESFYC-EICRL   71 (78)
T ss_dssp             CCCC-SSCCCC------CCSCEEECSSTTTCCEEEHHHHSCCCT-TTCSCSCSCSSCCC-HHHHH
T ss_pred             CCEE-ECCCCC------CCCCEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEC-CCCCC
T ss_conf             5483-899941------788678886898986798001176632-42245689998989-78848

>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein At1g33420
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.08  E-value=0.025  Score=30.60  Aligned_cols=36  Identities=17%  Similarity=0.526  Sum_probs=28.9

Q ss_pred             CCCCCCCCCCCCCCCCHHCCCCCCCCCC--CCCCCCCCCCCCHHH
Q ss_conf             8982018779866743000001124457--889998558110002
Q 002450          544 GLGIICHCCNSEVSPSQFEAHAECASLS--SIPQGDWYCKYCQNM  586 (920)
Q Consensus       544 g~GI~CdCCn~evsPS~FEaHA~CL~Le--sIPsGdW~Cp~C~~~  586 (920)
                      ..-|.|+.|+.     -|  |+.|+++.  .+|.++|+|+.|+..
T Consensus        29 ~~mv~Cd~C~~-----w~--H~~C~g~~~~~~~~~~~~C~~C~~~   66 (72)
T d1weea_          29 ERMLACDGCGV-----WH--HTRCIGINNADALPSKFLCFRCIEL   66 (72)
T ss_dssp             SCEEECSSSCE-----EE--ETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred             CEEEEECCCCC-----CC--CHHHCCCCCCCCCCCCEECCCCCCC
T ss_conf             86989599998-----39--5512697624589976999288581

>d1kzfa_ d.108.1.3 (A:) Acyl-homoserinelactone synthase EsaI {Pantoea stewartii subsp. stewartii [TaxId: 66271]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: Autoinducer synthetase
domain: Acyl-homoserinelactone synthase EsaI
species: Pantoea stewartii subsp. stewartii [TaxId: 66271]

Probab=90.19  E-value=0.42  Score=22.45  Aligned_cols=88  Identities=15%  Similarity=0.019  Sum_probs=66.6

Q ss_pred             CEEC-CEEEEEEEECCEEEEEEEEEE-------------------ECCEEEEEEEEEECCCCCCC------CHHHHHHHH
Q ss_conf             3217-619999944896999999977-------------------47814675333420485577------915999999
Q 002450          783 QEFG-GMYCAILTVNSSVVSAGILRV-------------------FGQEVAELPLVATSKINHGK------GYFQLLFAC  836 (920)
Q Consensus       783 ~~f~-GfY~~VLe~~~~iVsaAslrI-------------------~G~~vAEiPlvAT~~~yrrq------G~gr~Lv~~  836 (920)
                      .|-. -.|.+ ...+|++||++-|--                   ...+++|+--+|+...+++.      .....|+.+
T Consensus        47 yD~~~~~~lv-~~~~g~~vG~~Rllp~~~~~~l~~~f~~l~~~~~~~~~i~E~sR~~V~~~~r~~~~~~~~~v~~~L~~~  125 (210)
T d1kzfa_          47 FDGPGTRYIL-GICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYGTESSRFFVDKARARALLGEHYPISQVLFLA  125 (210)
T ss_dssp             TCSTTCEEEE-EEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSCEEEEEEEECHHHHHHHHCTTCCHHHHHHHH
T ss_pred             CCCCCCEEEE-EECCCEEEEEEEECCCCCCCCHHHCCHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf             6788978999-973995899997447899734100322331687899986899778963333555555534689999999


Q ss_pred             HHHHHHHCCCCEEEECCHHHHHHHHHHCCCC--EECCH
Q ss_conf             9998321491199983813259997833694--88296
Q 002450          837 IEKLLSFLRVKSIVLPAAEEAESIWTDKFGF--KKIDP  872 (920)
Q Consensus       837 IE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF--~~i~~  872 (920)
                      +.......|++.++.-+.+.+..+|.+ +||  .++++
T Consensus       126 ~~~~a~~~Gi~~~~~v~~~~~~r~~~r-~G~~~~~lg~  162 (210)
T d1kzfa_         126 MVNWAQNNAYGNIYTIVSRAMLKILTR-SGWQIKVIKE  162 (210)
T ss_dssp             HHHHHHHTTCSEEEEEEEHHHHHHHHH-HCCCCEEEEE
T ss_pred             HHHHHHHCCCCEEEEEECHHHHHHHHH-CCCCEEECCC
T ss_conf             999999879988999947899999987-7997287677

>d1ufna_ d.217.1.1 (A:) Putative nuclear protein homolog 5830484a20rik {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SAND domain-like
superfamily: SAND domain-like
family: SAND domain
domain: Putative nuclear protein homolog 5830484a20rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.02  E-value=0.044  Score=28.97  Aligned_cols=64  Identities=14%  Similarity=0.159  Sum_probs=47.0

Q ss_pred             CCEEEEECCCCCCCCEEEEEE--E--CCEEEEECCCCCCCEECCHHHHHHCCCC-CCCCCCCCEECCCCCCHHHHHHH
Q ss_conf             835999728764320047999--3--7826740767999700281245330146-56894555002379429999999
Q 002450          239 GVSVVYMGGIKFQASGLRGII--R--DGGILCSCSLCNGCRVIPPSKFEIHACK-QYRRASQYICFENGKSLLEVLRA  311 (920)
Q Consensus       239 G~~V~Y~~~~~~~~~~L~G~I--~--~~GilC~C~~C~~~~vvs~s~FE~HAGs-~~~~p~~~I~LenG~SL~~v~~a  311 (920)
                      -.||++-        .++|++  .  ..|++|-|-.|.+.+-++|.+||.|+|. +.+.--..|.. +|++|..+|+.
T Consensus        16 ~LpVtCG--------~~~G~L~~~kf~~G~~~kCI~~~~g~w~TP~eFe~~~gk~~~K~WK~sIr~-~g~~L~~Lie~   84 (94)
T d1ufna_          16 TLPVTCG--------KAKGTLFQEKLKQGASKKCIQNEAGDWLTVKEFLNEGGRATSKDWKGVIRC-NGETLRHLEQK   84 (94)
T ss_dssp             EEEEEET--------TEEEEEEHHHHHSCTTSCCEECTTCCEECHHHHHHHHTCTTCSCHHHHCEE-TTEEHHHHHHT
T ss_pred             CEEEEEC--------CCEEEEEHHHCCCCCEECCEEECCCCEECHHHHHHHCCCCCCCCCCCCEEE-CCEEHHHHHHC
T ss_conf             1036868--------938899776744875503448079818888999772586455787340889-98459999877

>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: variant PHD-like domain
domain: Hypothetical protein KIAA1045
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.94  E-value=0.094  Score=26.76  Aligned_cols=58  Identities=26%  Similarity=0.587  Sum_probs=41.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-------CC-CCCCCCCCCEEECCCCHHHHH
Q ss_conf             3565561266888888898999425347789854645576576-------77-557999963031676353789
Q 002450          627 AELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHK-------MA-DLRELPKGKWFCCMDCSRINS  692 (920)
Q Consensus       627 ~e~~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~-------~~-~L~eiP~g~WFC~~~C~~I~~  692 (920)
                      .+...|.+|..+       ....++-|--|.|-||-+||+..+       ++ ......+--|-| ..|.++..
T Consensus        13 ~~D~mC~vC~v~-------t~~~l~pCRvCtRv~H~~CL~r~gyl~~e~a~e~~e~A~T~~GWSC-~~C~nl~~   78 (89)
T d1wila_          13 VNDEMCDVCEVW-------TAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSC-HYCDNINL   78 (89)
T ss_dssp             CCSCCCTTTCCC-------CSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCC-TTTCCCCS
T ss_pred             CCCCCCCCCCCC-------CCCCEECCEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCH-HHHCCHHH
T ss_conf             867623656743-------3454023213341124788988510244899999986047888310-22122545

>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Sumoylation ligase E3, SIZ1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.68  E-value=0.1  Score=26.50  Aligned_cols=36  Identities=28%  Similarity=0.655  Sum_probs=26.3

Q ss_pred             CCCCCCCCC--CCCCCCCCHHCCCCCCCCCCCCCCC-------CCCCCCCHH
Q ss_conf             189820187--7986674300000112445788999-------855811000
Q 002450          543 NGLGIICHC--CNSEVSPSQFEAHAECASLSSIPQG-------DWYCKYCQN  585 (920)
Q Consensus       543 tg~GI~CdC--Cn~evsPS~FEaHA~CL~LesIPsG-------dW~Cp~C~~  585 (920)
                      .+..|.|+|  |..     -|  |..|+++...|.+       .|+|+.|..
T Consensus        27 ~~~~i~c~c~~C~~-----W~--H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~   71 (78)
T d1wewa_          27 TDSMIQCEDPRCHV-----WQ--HVGCVILPDKPMDGNPPLPESFYCEICRL   71 (78)
T ss_dssp             CSCEEECSSTTTCC-----EE--EHHHHSCCCTTTCSCSCSCSSCCCHHHHH
T ss_pred             CCCEEEEECCCCCC-----CC--CCCCCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf             88678886898986-----79--80011766324224568999898978848

>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein At5g26210
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.05  E-value=0.14  Score=25.71  Aligned_cols=34  Identities=26%  Similarity=0.679  Sum_probs=25.5

Q ss_pred             CCCCCCCCCCCCCCHHCCCCCCCCCC--CC-CCCCCCCCCCHHH
Q ss_conf             82018779866743000001124457--88-9998558110002
Q 002450          546 GIICHCCNSEVSPSQFEAHAECASLS--SI-PQGDWYCKYCQNM  586 (920)
Q Consensus       546 GI~CdCCn~evsPS~FEaHA~CL~Le--sI-PsGdW~Cp~C~~~  586 (920)
                      -|.|+.|+.     -|  |+.|+++.  .+ +..+|+|+.|...
T Consensus        22 ~I~Cd~C~~-----w~--H~~C~~~~~~~~~~~~~w~C~~C~~~   58 (64)
T d1we9a_          22 WICCDLCEM-----WF--HGKCVKITPARAEHIKQYKCPSCSNK   58 (64)
T ss_dssp             EEECSSSCC-----EE--ETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred             EEECCCCCC-----CC--CCCCCCCCHHHCCCCCEEECCCCCCC
T ss_conf             877489995-----69--80457858678888980899689380