Citrus Sinensis ID: 002976
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 861 | 2.2.26 [Sep-21-2011] | |||||||
| Q80Y81 | 831 | Zinc phosphodiesterase EL | yes | no | 0.775 | 0.803 | 0.311 | 3e-85 | |
| Q9BQ52 | 826 | Zinc phosphodiesterase EL | yes | no | 0.793 | 0.826 | 0.305 | 2e-84 | |
| Q9GL73 | 826 | Zinc phosphodiesterase EL | N/A | no | 0.786 | 0.819 | 0.303 | 6e-84 | |
| Q9GL72 | 826 | Zinc phosphodiesterase EL | yes | no | 0.793 | 0.826 | 0.304 | 1e-83 | |
| Q8CGS5 | 827 | Zinc phosphodiesterase EL | yes | no | 0.761 | 0.793 | 0.305 | 2e-83 | |
| Q8MKW7 | 766 | Ribonuclease Z, mitochond | yes | no | 0.765 | 0.860 | 0.293 | 8e-74 | |
| Q10155 | 809 | Ribonuclease Z 1 OS=Schiz | yes | no | 0.795 | 0.846 | 0.265 | 9e-65 | |
| O44476 | 833 | Ribonuclease Z OS=Caenorh | yes | no | 0.793 | 0.819 | 0.269 | 9e-61 | |
| Q8HY87 | 826 | Zinc phosphodiesterase EL | N/A | no | 0.579 | 0.604 | 0.299 | 7e-53 | |
| P36159 | 838 | Ribonuclease Z OS=Sacchar | yes | no | 0.824 | 0.847 | 0.247 | 2e-50 |
| >sp|Q80Y81|RNZ2_MOUSE Zinc phosphodiesterase ELAC protein 2 OS=Mus musculus GN=Elac2 PE=1 SV=1 | Back alignment and function desciption |
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Score = 317 bits (812), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 256/822 (31%), Positives = 366/822 (44%), Gaps = 154/822 (18%)
Query: 62 VLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGD 121
+ +F + R++FN GEG+QR EHK+K++++D+IFL+R+ GGL G++LTL G
Sbjct: 66 LYVFSEYNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSNVGGLCGMILTLKETGL 125
Query: 122 EGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVD- 180
++ GP L+ ++A+K F + P S D + + +
Sbjct: 126 PKCVLS--GPPQLEKYLEAIKIFSGPLKGIE---LAVRPHSAPEYKDETMTVYQVPIHSE 180
Query: 181 --------NELAKISAILLKP-SCSDGSPVKPGETS--------------------VIYV 211
++ + S L P SD + G+ V +V
Sbjct: 181 RRCGKQQPSQSPRTSPNRLSPKQSSDSGSAENGQCPPEDSSAGANRKAWGRDPSLVVAFV 240
Query: 212 CELPEITGKFDPKKAVALGLKPGPKYRE-----LQSGKSVKSDTLDIMVHPSDVLGPSLP 266
C+L G F KA LGL G ++ GKS+ + +I ++ P P
Sbjct: 241 CKLHLRKGNFLVLKAKELGLPVGTAAIAPIIAAVKDGKSITYEGREIAA--EELCTPPDP 298
Query: 267 GPLVLLVDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHLSPVSVTGTSNYQK 326
G + ++V+CP E +L + ++ Y A+ V ++H++P SV S YQ+
Sbjct: 299 GLVFIVVECPDEGFILPICENDTFKRYQAEADA------PVALVVHIAPESVLIDSRYQQ 352
Query: 327 WMKRFG-SAQHIMAGHEMKNVEIPILKSSARITTRLNYLCPQLFPASGFWSLPHFNTSAA 385
WM+RFG QH++ +V S +I T+L+ + P +FP L F +
Sbjct: 353 WMERFGPDTQHLILNENCPSVHN---LRSHKIQTQLSLIHPDIFP-----QLTSFYSKEE 404
Query: 386 ESSASEGPVPSICAENLLKFTLRPLANLGIDRTNIPSLEAPSEITNELLSEVPEVVDAAH 445
S+ S VP++ E LLK+ LRP D T L E + A
Sbjct: 405 GSTLS---VPTVRGECLLKYQLRPKREWQRDTT--------------LDCNTDEFIAEAL 447
Query: 446 QISQFWQGPRELKDDCPMLDNEVMIEESWLDENRLPNCLDNVRRDDLEIVLLGTGSSQPS 505
++ F + E + + + EN P R EIV LGTGS+ P
Sbjct: 448 ELPSFQESVEEYRKN--------------VQENPAPA---EKRSQYPEIVFLGTGSAIPM 490
Query: 506 KYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHA 565
K RNVSS VNL S+LLDCGEGT GQL R YG + D + L +++SH+HADHH
Sbjct: 491 KIRNVSSTLVNLSPDKSVLLDCGEGTFGQLCRHYG-QQIDRVLCSLTAVFVSHLHADHHT 549
Query: 566 GLARILALRRDLLK--GVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWN 623
GL IL R L G P +PLLVV P L+ +L Y HC+
Sbjct: 550 GLLNILLQREHALASLGKPFQPLLVVAPTQLRAWLQQYHN---------HCQ-------- 592
Query: 624 DFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLK 683
E + ++S C+Q G V N L+
Sbjct: 593 ------EILHHVS-------------------MIPAKCLQK-----GAEVSNTTLERLIS 622
Query: 684 NLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPEL 743
L L LE + V HC AFG AL + GWK+VYSGDT PC L
Sbjct: 623 LL---LETCDLEEFQTCLVRHCKHAFGCALVHSS----------GWKVVYSGDTMPCEAL 669
Query: 744 VEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIP 803
V+ + AT+LIHEAT EDG+ EEA+ K HSTT +AI+VG I+L HFSQRY KIP
Sbjct: 670 VQMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQRYAKIP 729
Query: 804 VVDETHMHKTCIAFDLMSINLADLPILPKVLPYFKLLFKDEM 845
+ K IAFD M + D P +PK++P K LF ++
Sbjct: 730 LFSPDFNEKVGIAFDHMKVCFGDFPTVPKLIPPLKALFAGDI 771
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Zinc phosphodiesterase, which displays some tRNA 3'-processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA. Mus musculus (taxid: 10090) EC: 3EC: .EC: 1EC: .EC: 2EC: 6EC: .EC: 1EC: 1 |
| >sp|Q9BQ52|RNZ2_HUMAN Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens GN=ELAC2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9GL73|RNZ2_GORGO Zinc phosphodiesterase ELAC protein 2 OS=Gorilla gorilla gorilla GN=ELAC2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9GL72|RNZ2_PANTR Zinc phosphodiesterase ELAC protein 2 OS=Pan troglodytes GN=ELAC2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8CGS5|RNZ2_RAT Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus GN=Elac2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8MKW7|RNZ_DROME Ribonuclease Z, mitochondrial OS=Drosophila melanogaster GN=JhI-1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q10155|RNZ1_SCHPO Ribonuclease Z 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trz1 PE=3 SV=1 | Back alignment and function description |
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| >sp|O44476|RNZ_CAEEL Ribonuclease Z OS=Caenorhabditis elegans GN=hoe-1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q8HY87|RNZ2_MACFA Zinc phosphodiesterase ELAC protein 2 OS=Macaca fascicularis GN=ELAC2 PE=2 SV=1 | Back alignment and function description |
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| >sp|P36159|RNZ_YEAST Ribonuclease Z OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRZ1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 861 | ||||||
| 225442543 | 951 | PREDICTED: zinc phosphodiesterase ELAC p | 0.986 | 0.892 | 0.735 | 0.0 | |
| 297743234 | 841 | unnamed protein product [Vitis vinifera] | 0.959 | 0.982 | 0.737 | 0.0 | |
| 224054386 | 829 | predicted protein [Populus trichocarpa] | 0.953 | 0.990 | 0.724 | 0.0 | |
| 449448166 | 961 | PREDICTED: zinc phosphodiesterase ELAC p | 0.989 | 0.886 | 0.710 | 0.0 | |
| 147838869 | 1694 | hypothetical protein VITISV_011432 [Viti | 0.969 | 0.492 | 0.685 | 0.0 | |
| 356557289 | 911 | PREDICTED: zinc phosphodiesterase ELAC p | 0.975 | 0.922 | 0.704 | 0.0 | |
| 356547384 | 912 | PREDICTED: zinc phosphodiesterase ELAC p | 0.982 | 0.927 | 0.699 | 0.0 | |
| 357454847 | 950 | Zinc phosphodiesterase ELAC protein [Med | 0.980 | 0.888 | 0.672 | 0.0 | |
| 297830222 | 946 | hypothetical protein ARALYDRAFT_341756 [ | 0.946 | 0.861 | 0.687 | 0.0 | |
| 26449703 | 942 | unknown protein [Arabidopsis thaliana] | 0.946 | 0.865 | 0.684 | 0.0 |
| >gi|225442543|ref|XP_002278956.1| PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1260 bits (3260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/869 (73%), Positives = 725/869 (83%), Gaps = 20/869 (2%)
Query: 3 ESAKESSFGFNKRRAEGRDKDVHDKKKLQLKVRKLNPINTLSYVQILGTGMDTQDTSPSV 62
E + S GFNKRRAEGRDK+ K LQLK RKLNP+NT+ YVQILGTGMDTQDTS SV
Sbjct: 84 EETESGSVGFNKRRAEGRDKN-DRPKTLQLKARKLNPVNTICYVQILGTGMDTQDTSSSV 142
Query: 63 LLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDE 122
LLFFD QRFIFNAGEGLQRFCTEHKIKLSK+DHIFLSRVCSETAGGLPGLLLTLAG+GDE
Sbjct: 143 LLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCSETAGGLPGLLLTLAGMGDE 202
Query: 123 GLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSD-ASLPDSAKSANHIILVDN 181
G+SVN+WGPSDLKYLVDAM+SFIP+AAMVHT FG A SD A +PD + ++ I+L+D+
Sbjct: 203 GMSVNIWGPSDLKYLVDAMRSFIPNAAMVHTRSFGQALGSDGAPIPDLREFSDPIVLIDD 262
Query: 182 ELAKISAILLKPS--CSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRE 239
E+ KISAILL+PS G+ VKPG+ SVIYVCELPEI GKFDP+KAVALGLK GPKYRE
Sbjct: 263 EVVKISAILLRPSEDSKAGAMVKPGDISVIYVCELPEIKGKFDPQKAVALGLKAGPKYRE 322
Query: 240 LQSGKSVKSDTLDIMVHPSDVLGPSLPGPLVLLVDCPTESHVLELLSAESLNSYYADFSG 299
LQ GKSV SD +IMVHPSDV+GPS+PGPLVLLVDCPTES++ +LLS ESL+SYYA S
Sbjct: 323 LQLGKSVVSDRKNIMVHPSDVMGPSIPGPLVLLVDCPTESYLQDLLSVESLSSYYAGSSS 382
Query: 300 DP-QCAKTVNCIIHLSPVSVTGTSNYQKWMKRFGSAQHIMAGHEMKNVEIPILKSSARIT 358
+P + AKTVNC+IHLSP SV NYQ WMKRFG+AQHIMAGHEMKNVEIPILKSSARI
Sbjct: 383 NPPESAKTVNCVIHLSPASVVRAPNYQVWMKRFGAAQHIMAGHEMKNVEIPILKSSARIA 442
Query: 359 TRLNYLCPQLFPASGFWSLPHFNTSAAESSAS----------EGPVPSICAENLLKFTLR 408
RLNYLCP+ FPA GFWSL H N S E AS + S+ AENLLKF LR
Sbjct: 443 ARLNYLCPRFFPAPGFWSLRHLNHSIPELIASSEVCLLSHCFDTLCESVAAENLLKFHLR 502
Query: 409 PLANLGIDRTNIPSLEAPSEITNELLSEVPEVVDAAHQISQFWQGPRELKDD-CPMLDNE 467
P A LG+DR+ IPSL +PSEI ++L+SE+PEVVDAA ++ QFW G E K + PM D++
Sbjct: 503 PYAQLGLDRSGIPSLSSPSEIIDDLVSEIPEVVDAAQEVGQFWNGFGEAKGEITPMHDDK 562
Query: 468 VMIEESWLDENRLPNCLDNVRRDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDC 527
VMIEE WL+ N LP CL+N+ R+D+EIVLLGTGSSQPSKYRNV+SIY+NLFSKGSLLLDC
Sbjct: 563 VMIEEPWLNWNTLPGCLENITREDMEIVLLGTGSSQPSKYRNVTSIYINLFSKGSLLLDC 622
Query: 528 GEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLL 587
GEGTLGQLKRR+ VEGAD+AVR LRCIWISHIHADHHAGLARIL LRRDLLKGVPHEPLL
Sbjct: 623 GEGTLGQLKRRFSVEGADNAVRGLRCIWISHIHADHHAGLARILTLRRDLLKGVPHEPLL 682
Query: 588 VVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGL 647
V+GP LKRYLDAY++LEDLDMQFL CR+T E S N FE + E K S+P E +
Sbjct: 683 VIGPRQLKRYLDAYQKLEDLDMQFLDCRHTTEVSLNAFECSFETNKEHSSP----EVELM 738
Query: 648 INKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQ 707
+++LFAKGS MQS WK PG PVD++ AFP+LKNLK VL EAGLE LISFPVVHCPQ
Sbjct: 739 NQNIDSSLFAKGSRMQSYWKRPGSPVDHSVAFPILKNLKKVLCEAGLEALISFPVVHCPQ 798
Query: 708 AFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEA 767
AFG LKA+ERINSVGKVIPGWKIVYSGDTRPCPEL+EA+RGATVLIHEATFE+GM++EA
Sbjct: 799 AFGVVLKASERINSVGKVIPGWKIVYSGDTRPCPELIEAARGATVLIHEATFEEGMVDEA 858
Query: 768 IAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIPVVDETHMHKTCIAFDLMSINLADL 827
IA+NHSTT EAI+VG+SAG YRIILTHFSQRYPKIPV D+ HMHKTCIAFDLMS+N+ADL
Sbjct: 859 IARNHSTTNEAIEVGNSAGAYRIILTHFSQRYPKIPVFDDAHMHKTCIAFDLMSVNMADL 918
Query: 828 PILPKVLPYFKLLFKDEMPVDESDDVVDA 856
P+LPKVLPY KLLF++EM VDE DDV+ A
Sbjct: 919 PVLPKVLPYLKLLFRNEMTVDELDDVISA 947
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743234|emb|CBI36101.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224054386|ref|XP_002298234.1| predicted protein [Populus trichocarpa] gi|222845492|gb|EEE83039.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449448166|ref|XP_004141837.1| PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|147838869|emb|CAN70334.1| hypothetical protein VITISV_011432 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356557289|ref|XP_003546950.1| PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356547384|ref|XP_003542092.1| PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357454847|ref|XP_003597704.1| Zinc phosphodiesterase ELAC protein [Medicago truncatula] gi|355486752|gb|AES67955.1| Zinc phosphodiesterase ELAC protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|297830222|ref|XP_002882993.1| hypothetical protein ARALYDRAFT_341756 [Arabidopsis lyrata subsp. lyrata] gi|297328833|gb|EFH59252.1| hypothetical protein ARALYDRAFT_341756 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|26449703|dbj|BAC41975.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 861 | ||||||
| TAIR|locus:2037430 | 890 | TRZ3 "AT1G52160" [Arabidopsis | 0.714 | 0.691 | 0.584 | 3.4e-268 | |
| TAIR|locus:2094912 | 942 | TRZ4 "AT3G16260" [Arabidopsis | 0.730 | 0.667 | 0.603 | 1.2e-198 | |
| UNIPROTKB|E1BDK7 | 777 | ELAC2 "Uncharacterized protein | 0.181 | 0.200 | 0.467 | 1e-70 | |
| MGI|MGI:1890496 | 831 | Elac2 "elaC homolog 2 (E. coli | 0.178 | 0.185 | 0.460 | 6.2e-69 | |
| UNIPROTKB|Q9BQ52 | 826 | ELAC2 "Zinc phosphodiesterase | 0.181 | 0.188 | 0.431 | 1e-68 | |
| UNIPROTKB|G3V6F5 | 827 | Elac2 "Zinc phosphodiesterase | 0.181 | 0.188 | 0.445 | 3.6e-68 | |
| ZFIN|ZDB-GENE-041111-227 | 865 | elac2 "elaC homolog 2 (E. coli | 0.137 | 0.136 | 0.5 | 5.6e-68 | |
| RGD|628882 | 827 | Elac2 "elaC homolog 2 (E. coli | 0.181 | 0.188 | 0.445 | 7.5e-68 | |
| UNIPROTKB|E2RHF6 | 821 | ELAC2 "Uncharacterized protein | 0.181 | 0.190 | 0.425 | 3.6e-65 | |
| UNIPROTKB|G5E9D5 | 807 | ELAC2 "Zinc phosphodiesterase | 0.181 | 0.193 | 0.431 | 1.9e-62 |
| TAIR|locus:2037430 TRZ3 "AT1G52160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1827 (648.2 bits), Expect = 3.4e-268, Sum P(2) = 3.4e-268
Identities = 382/653 (58%), Positives = 448/653 (68%)
Query: 5 AKESSFGFNKRRAEGRDKDVHDKKK--LQLKVRKLNPINTLSYVQILGTGMDTQDTSPSV 62
+ +SF FNKRRAEG D + DKKK L+ K +KLNP NT++Y QILGTGMDTQDTS SV
Sbjct: 63 SSSNSFVFNKRRAEGFD--ITDKKKRNLERKSQKLNPTNTIAYAQILGTGMDTQDTSSSV 120
Query: 63 LLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSEXXXXXXXXXXXXXXXXDE 122
LLFFD QRFIFNAGEGLQRFCTEHKIKLSK+DH+FLSRVCSE +E
Sbjct: 121 LLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHVFLSRVCSETAGGLPGLLLTLAGIGEE 180
Query: 123 GLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGXXXXXXXXXXXXXXXXNHIILVDNE 182
GLSVNVWGPSDL YLVDAMKSFIP AAMVHT FG + I+LV++E
Sbjct: 181 GLSVNVWGPSDLNYLVDAMKSFIPRAAMVHTRSFGPSSTP-----------DPIVLVNDE 229
Query: 183 LAKISAILLKPSCSD-GSPVKPGETSVIYVCELPEITGKFDPKKAVAL-GLKPGPKYREL 240
+ KISAI+LKP S+ S K G+ SV+YVCELPEI GKFD +KA + G+KPGPKY L
Sbjct: 230 VVKISAIILKPCHSEEDSGNKSGDLSVVYVCELPEILGKFDLEKAKKVFGVKPGPKYSRL 289
Query: 241 QSGKSVKSDTLDIMVHXXXXXXXXXXXXXXXXXXCPTESHVLELLSAESLNSYYADFSGD 300
QSG+SVKSD DI VH CPTESH EL S +SL SYY+ S D
Sbjct: 290 QSGESVKSDERDITVHPSDVMGPSLPGPIVLLVDCPTESHAAELFSLKSLESYYS--SPD 347
Query: 301 PQC--AKTVNCIIHLSPVSVTGTSNYQKWMKRFGSAQHIMAGHEMKNVEIPILKSSARIT 358
Q AK VNCIIHLSP SVT + YQ WMK+F QHI+AGH+ KN+ PILK+S+RI
Sbjct: 348 EQTIGAKFVNCIIHLSPSSVTSSPTYQSWMKKFHLTQHILAGHQRKNMAFPILKASSRIA 407
Query: 359 TRLNYLCPQLFPASGFWSLPHFNTSAAESS-----ASEGPVPSICAENLLKFTLRPLANL 413
RLNYLCPQ FPA GFW + S + + +S SI AENLLKF LRP+A
Sbjct: 408 ARLNYLCPQFFPAPGFWPSQLTDNSIIDPTPSNKCSSSNLAESISAENLLKFNLRPVAIR 467
Query: 414 GIDRTNIPSLEAPSEITNELLSEVPEVVDAAHQISQFWQGPRELKDDCPMLDNEVMIEES 473
GIDR+ IP+ SE+ +ELLSE+PE+ D + +I QFW N+ +IE+
Sbjct: 468 GIDRSCIPAPLTSSEVVDELLSEIPEIKDKSEEIKQFWNKQH----------NKTIIEKL 517
Query: 474 WLDE-NR-LPNCLDNVRRDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGT 531
WL E N LPNCL+ +RRDD+EIV+LGTGSSQPSKYRNVS+I+++LFS+GSLLLDCGEGT
Sbjct: 518 WLSECNTVLPNCLEKIRRDDMEIVILGTGSSQPSKYRNVSAIFIDLFSRGSLLLDCGEGT 577
Query: 532 LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHXXXXXXXXXXXXXXKGVPHEPLLVVGP 591
LGQLKRRYG++GAD AVRKLRCIWISHIHADHH KGV HEP++VVGP
Sbjct: 578 LGQLKRRYGLDGADEAVRKLRCIWISHIHADHHTGLARILALRSKLLKGVTHEPVIVVGP 637
Query: 592 GPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFST 644
PLKR+LDAY+RLEDLDM+FL CR T SW E GE +L T GSP +
Sbjct: 638 RPLKRFLDAYQRLEDLDMEFLDCRSTTATSWASLESGGEAEGSLFTQGSPMQS 690
|
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| TAIR|locus:2094912 TRZ4 "AT3G16260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BDK7 ELAC2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| MGI|MGI:1890496 Elac2 "elaC homolog 2 (E. coli)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9BQ52 ELAC2 "Zinc phosphodiesterase ELAC protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G3V6F5 Elac2 "Zinc phosphodiesterase ELAC protein 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-041111-227 elac2 "elaC homolog 2 (E. coli)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| RGD|628882 Elac2 "elaC homolog 2 (E. coli)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RHF6 ELAC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G5E9D5 ELAC2 "Zinc phosphodiesterase ELAC protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.26.11 | 0.824 |
| 3rd Layer | 3.1.26 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 861 | |||
| COG1234 | 292 | COG1234, ElaC, Metal-dependent hydrolases of the b | 2e-56 | |
| PRK00055 | 270 | PRK00055, PRK00055, ribonuclease Z; Reviewed | 6e-29 | |
| TIGR02651 | 299 | TIGR02651, RNase_Z, ribonuclease Z | 1e-26 | |
| TIGR02649 | 303 | TIGR02649, true_RNase_BN, ribonuclease BN | 1e-25 | |
| PRK00055 | 270 | PRK00055, PRK00055, ribonuclease Z; Reviewed | 3e-20 | |
| TIGR02651 | 299 | TIGR02651, RNase_Z, ribonuclease Z | 1e-19 | |
| TIGR02651 | 299 | TIGR02651, RNase_Z, ribonuclease Z | 1e-19 | |
| pfam13691 | 63 | pfam13691, Lactamase_B_4, Family description | 3e-18 | |
| PRK00055 | 270 | PRK00055, PRK00055, ribonuclease Z; Reviewed | 2e-14 | |
| pfam12706 | 197 | pfam12706, Lactamase_B_2, Beta-lactamase superfami | 3e-13 | |
| COG1234 | 292 | COG1234, ElaC, Metal-dependent hydrolases of the b | 2e-11 | |
| PRK02126 | 334 | PRK02126, PRK02126, ribonuclease Z; Provisional | 2e-10 | |
| pfam12706 | 197 | pfam12706, Lactamase_B_2, Beta-lactamase superfami | 2e-07 | |
| TIGR02650 | 277 | TIGR02650, RNase_Z_T_toga, ribonuclease Z, Thermot | 6e-05 | |
| TIGR02649 | 303 | TIGR02649, true_RNase_BN, ribonuclease BN | 3e-04 | |
| PRK14866 | 451 | PRK14866, PRK14866, hypothetical protein; Provisio | 3e-04 | |
| smart00849 | 177 | smart00849, Lactamase_B, Metallo-beta-lactamase su | 7e-04 | |
| pfam00753 | 148 | pfam00753, Lactamase_B, Metallo-beta-lactamase sup | 0.003 |
| >gnl|CDD|224155 COG1234, ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 2e-56
Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 53/339 (15%)
Query: 491 DLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRK 550
+EI LGTG + P+K RNVSSI + L + L DCGEGT QL R A RK
Sbjct: 1 MMEITFLGTGGAVPTKDRNVSSILLRLEGE-KFLFDCGEGTQHQLLR------AGLPPRK 53
Query: 551 LRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQ 610
+ I+I+H+H DH AGL +L R + EPL + GP +K +++ RL +
Sbjct: 54 IDAIFITHLHGDHIAGLPGLLVSRSFRGR---REPLKIYGPPGIKEFVETSLRLSYSKLT 110
Query: 611 FLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPG 670
+ E + FE + + + A G ++ +
Sbjct: 111 YE--IIGHEIEEDAFEVEALELDHG-------------------VPALGYRIEEPDRPGR 149
Query: 671 IPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGWK 730
+ P + + H + + A+RI K G
Sbjct: 150 FDAEKLKGLPPGPLIT------------ALKAGHPVE--ERVITPADRIGEPRK---GKS 192
Query: 731 IVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRI 790
+VYSGDTRPC EL++ ++GA +LIHEATFED + + A HST +EA ++ AGV ++
Sbjct: 193 VVYSGDTRPCDELIDLAKGADLLIHEATFEDDLEDLANEGGHSTAEEAAEIAKEAGVKKL 252
Query: 791 ILTHFSQRYPK-----IPVVDETHMHKTCIAFDLMSINL 824
ILTHFS RYPK + +T +A D + +
Sbjct: 253 ILTHFSPRYPKDDEELLKEARAIFPGETIVARDGLVFEV 291
|
Length = 292 |
| >gnl|CDD|234602 PRK00055, PRK00055, ribonuclease Z; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233963 TIGR02651, RNase_Z, ribonuclease Z | Back alignment and domain information |
|---|
| >gnl|CDD|131697 TIGR02649, true_RNase_BN, ribonuclease BN | Back alignment and domain information |
|---|
| >gnl|CDD|234602 PRK00055, PRK00055, ribonuclease Z; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233963 TIGR02651, RNase_Z, ribonuclease Z | Back alignment and domain information |
|---|
| >gnl|CDD|233963 TIGR02651, RNase_Z, ribonuclease Z | Back alignment and domain information |
|---|
| >gnl|CDD|205867 pfam13691, Lactamase_B_4, Family description | Back alignment and domain information |
|---|
| >gnl|CDD|234602 PRK00055, PRK00055, ribonuclease Z; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|221727 pfam12706, Lactamase_B_2, Beta-lactamase superfamily domain | Back alignment and domain information |
|---|
| >gnl|CDD|224155 COG1234, ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|235006 PRK02126, PRK02126, ribonuclease Z; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|221727 pfam12706, Lactamase_B_2, Beta-lactamase superfamily domain | Back alignment and domain information |
|---|
| >gnl|CDD|188239 TIGR02650, RNase_Z_T_toga, ribonuclease Z, Thermotoga type | Back alignment and domain information |
|---|
| >gnl|CDD|131697 TIGR02649, true_RNase_BN, ribonuclease BN | Back alignment and domain information |
|---|
| >gnl|CDD|237840 PRK14866, PRK14866, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|214854 smart00849, Lactamase_B, Metallo-beta-lactamase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|216099 pfam00753, Lactamase_B, Metallo-beta-lactamase superfamily | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 861 | |||
| KOG2121 | 746 | consensus Predicted metal-dependent hydrolase (bet | 100.0 | |
| COG1234 | 292 | ElaC Metal-dependent hydrolases of the beta-lactam | 100.0 | |
| TIGR02649 | 303 | true_RNase_BN ribonuclease BN. Members of this pro | 100.0 | |
| TIGR02651 | 299 | RNase_Z ribonuclease Z. Processing of the 3-prime | 100.0 | |
| PRK00055 | 270 | ribonuclease Z; Reviewed | 100.0 | |
| PRK11244 | 250 | phnP carbon-phosphorus lyase complex accessory pro | 100.0 | |
| TIGR02649 | 303 | true_RNase_BN ribonuclease BN. Members of this pro | 100.0 | |
| PRK02113 | 252 | putative hydrolase; Provisional | 100.0 | |
| PRK05184 | 302 | pyrroloquinoline quinone biosynthesis protein PqqB | 99.98 | |
| TIGR02651 | 299 | RNase_Z ribonuclease Z. Processing of the 3-prime | 99.97 | |
| COG1234 | 292 | ElaC Metal-dependent hydrolases of the beta-lactam | 99.96 | |
| TIGR02108 | 302 | PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B. | 99.96 | |
| PRK02126 | 334 | ribonuclease Z; Provisional | 99.96 | |
| TIGR03307 | 238 | PhnP phosphonate metabolism protein PhnP. This fam | 99.95 | |
| TIGR02650 | 277 | RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me | 99.94 | |
| PRK02126 | 334 | ribonuclease Z; Provisional | 99.93 | |
| PRK00055 | 270 | ribonuclease Z; Reviewed | 99.9 | |
| PF12706 | 194 | Lactamase_B_2: Beta-lactamase superfamily domain; | 99.87 | |
| PRK00685 | 228 | metal-dependent hydrolase; Provisional | 99.81 | |
| PRK04286 | 298 | hypothetical protein; Provisional | 99.78 | |
| TIGR00649 | 422 | MG423 conserved hypothetical protein. Contains an | 99.75 | |
| PRK11709 | 355 | putative L-ascorbate 6-phosphate lactonase; Provis | 99.7 | |
| PRK05184 | 302 | pyrroloquinoline quinone biosynthesis protein PqqB | 99.65 | |
| PRK02113 | 252 | putative hydrolase; Provisional | 99.61 | |
| COG1235 | 269 | PhnP Metal-dependent hydrolases of the beta-lactam | 99.58 | |
| PF13691 | 63 | Lactamase_B_4: tRNase Z endonuclease | 99.58 | |
| TIGR03675 | 630 | arCOG00543 arCOG00543 universal archaeal KH-domain | 99.54 | |
| TIGR02650 | 277 | RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me | 99.54 | |
| PRK11244 | 250 | phnP carbon-phosphorus lyase complex accessory pro | 99.52 | |
| TIGR02108 | 302 | PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B. | 99.47 | |
| COG1236 | 427 | YSH1 Predicted exonuclease of the beta-lactamase f | 99.39 | |
| COG0595 | 555 | mRNA degradation ribonucleases J1/J2 (metallo-beta | 99.37 | |
| smart00849 | 183 | Lactamase_B Metallo-beta-lactamase superfamily. Ap | 99.31 | |
| PF02112 | 335 | PDEase_II: cAMP phosphodiesterases class-II; Inter | 99.31 | |
| COG1782 | 637 | Predicted metal-dependent RNase, consists of a met | 99.27 | |
| TIGR03307 | 238 | PhnP phosphonate metabolism protein PhnP. This fam | 99.25 | |
| PF13483 | 163 | Lactamase_B_3: Beta-lactamase superfamily domain; | 99.24 | |
| KOG1136 | 501 | consensus Predicted cleavage and polyadenylation s | 99.18 | |
| KOG2121 | 746 | consensus Predicted metal-dependent hydrolase (bet | 99.16 | |
| COG2220 | 258 | Predicted Zn-dependent hydrolases of the beta-lact | 99.05 | |
| KOG1137 | 668 | consensus mRNA cleavage and polyadenylation factor | 98.96 | |
| TIGR00649 | 422 | MG423 conserved hypothetical protein. Contains an | 98.88 | |
| PF00753 | 194 | Lactamase_B: Metallo-beta-lactamase superfamily; I | 98.86 | |
| PF12706 | 194 | Lactamase_B_2: Beta-lactamase superfamily domain; | 98.82 | |
| PRK04286 | 298 | hypothetical protein; Provisional | 98.81 | |
| PRK11921 | 394 | metallo-beta-lactamase/flavodoxin domain-containin | 98.62 | |
| PRK00685 | 228 | metal-dependent hydrolase; Provisional | 98.62 | |
| COG1237 | 259 | Metal-dependent hydrolases of the beta-lactamase s | 98.61 | |
| smart00849 | 183 | Lactamase_B Metallo-beta-lactamase superfamily. Ap | 98.57 | |
| TIGR03413 | 248 | GSH_gloB hydroxyacylglutathione hydrolase. Members | 98.56 | |
| COG1237 | 259 | Metal-dependent hydrolases of the beta-lactamase s | 98.49 | |
| COG0595 | 555 | mRNA degradation ribonucleases J1/J2 (metallo-beta | 98.47 | |
| TIGR03675 | 630 | arCOG00543 arCOG00543 universal archaeal KH-domain | 98.36 | |
| KOG1361 | 481 | consensus Predicted hydrolase involved in interstr | 98.35 | |
| PRK10241 | 251 | hydroxyacylglutathione hydrolase; Provisional | 98.34 | |
| PRK05452 | 479 | anaerobic nitric oxide reductase flavorubredoxin; | 98.33 | |
| COG1235 | 269 | PhnP Metal-dependent hydrolases of the beta-lactam | 98.33 | |
| COG5212 | 356 | PDE1 Low-affinity cAMP phosphodiesterase [Signal t | 98.31 | |
| KOG3798 | 343 | consensus Predicted Zn-dependent hydrolase (beta-l | 98.26 | |
| TIGR00361 | 662 | ComEC_Rec2 DNA internalization-related competence | 98.2 | |
| PLN02469 | 258 | hydroxyacylglutathione hydrolase | 98.16 | |
| COG2248 | 304 | Predicted hydrolase (metallo-beta-lactamase superf | 98.13 | |
| PLN02398 | 329 | hydroxyacylglutathione hydrolase | 98.11 | |
| COG0491 | 252 | GloB Zn-dependent hydrolases, including glyoxylase | 98.02 | |
| TIGR03413 | 248 | GSH_gloB hydroxyacylglutathione hydrolase. Members | 98.0 | |
| PRK11921 | 394 | metallo-beta-lactamase/flavodoxin domain-containin | 97.95 | |
| PF00753 | 194 | Lactamase_B: Metallo-beta-lactamase superfamily; I | 97.89 | |
| PLN02962 | 251 | hydroxyacylglutathione hydrolase | 97.89 | |
| PRK11539 | 755 | ComEC family competence protein; Provisional | 97.88 | |
| COG1782 | 637 | Predicted metal-dependent RNase, consists of a met | 97.86 | |
| PRK11709 | 355 | putative L-ascorbate 6-phosphate lactonase; Provis | 97.81 | |
| PRK14866 | 451 | hypothetical protein; Provisional | 97.8 | |
| COG2333 | 293 | ComEC Predicted hydrolase (metallo-beta-lactamase | 97.76 | |
| COG1236 | 427 | YSH1 Predicted exonuclease of the beta-lactamase f | 97.72 | |
| PF13691 | 63 | Lactamase_B_4: tRNase Z endonuclease | 97.66 | |
| TIGR00361 | 662 | ComEC_Rec2 DNA internalization-related competence | 97.62 | |
| KOG1136 | 501 | consensus Predicted cleavage and polyadenylation s | 97.6 | |
| PRK10241 | 251 | hydroxyacylglutathione hydrolase; Provisional | 97.56 | |
| PLN02398 | 329 | hydroxyacylglutathione hydrolase | 97.52 | |
| PLN02469 | 258 | hydroxyacylglutathione hydrolase | 97.42 | |
| COG0426 | 388 | FpaA Uncharacterized flavoproteins [Energy product | 97.37 | |
| PRK11539 | 755 | ComEC family competence protein; Provisional | 97.32 | |
| KOG0813 | 265 | consensus Glyoxylase [General function prediction | 97.25 | |
| PRK05452 | 479 | anaerobic nitric oxide reductase flavorubredoxin; | 97.07 | |
| KOG1135 | 764 | consensus mRNA cleavage and polyadenylation factor | 97.05 | |
| COG2333 | 293 | ComEC Predicted hydrolase (metallo-beta-lactamase | 96.9 | |
| PLN02962 | 251 | hydroxyacylglutathione hydrolase | 96.88 | |
| KOG1137 | 668 | consensus mRNA cleavage and polyadenylation factor | 96.83 | |
| PF02112 | 335 | PDEase_II: cAMP phosphodiesterases class-II; Inter | 96.82 | |
| KOG0813 | 265 | consensus Glyoxylase [General function prediction | 96.68 | |
| COG0491 | 252 | GloB Zn-dependent hydrolases, including glyoxylase | 96.66 | |
| PF13483 | 163 | Lactamase_B_3: Beta-lactamase superfamily domain; | 96.03 | |
| KOG1135 | 764 | consensus mRNA cleavage and polyadenylation factor | 95.27 | |
| COG2015 | 655 | Alkyl sulfatase and related hydrolases [Secondary | 95.09 | |
| COG5212 | 356 | PDE1 Low-affinity cAMP phosphodiesterase [Signal t | 94.43 | |
| COG2220 | 258 | Predicted Zn-dependent hydrolases of the beta-lact | 94.11 | |
| COG0426 | 388 | FpaA Uncharacterized flavoproteins [Energy product | 94.09 | |
| KOG0814 | 237 | consensus Glyoxylase [General function prediction | 93.94 | |
| COG2015 | 655 | Alkyl sulfatase and related hydrolases [Secondary | 88.12 | |
| KOG3592 | 934 | consensus Microtubule-associated proteins [Cytoske | 82.45 | |
| KOG3592 | 934 | consensus Microtubule-associated proteins [Cytoske | 80.83 |
| >KOG2121 consensus Predicted metal-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-117 Score=981.84 Aligned_cols=733 Identities=48% Similarity=0.774 Sum_probs=588.9
Q ss_pred ccccccccccccCCCccchhhhHHHhhhhccCCCCCeeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHHHHHHHc
Q 002976 7 ESSFGFNKRRAEGRDKDVHDKKKLQLKVRKLNPINTLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEH 86 (861)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtqr~l~~~ 86 (861)
--||++|+||+.|-++-.+.+..+..+..+-+|.|+.++++|+|+|.++.++..++++..+.++|+|+||||+||.+.++
T Consensus 12 s~s~~~~~~~~~~~d~~~~~~~~l~~~~~s~~~~~~~~~~~I~~~~~dt~~s~~~~~~~~~~~~~~~n~Geg~qr~~~eh 91 (746)
T KOG2121|consen 12 SISFAFNPRRAPGFDSVRRAKASLKRGAQSLNPTNTIRYLQISGSGMDTQDSPLSVYLFDDRKRFIFNCGEGTQRLLTEH 91 (746)
T ss_pred hhhhccCcccccCcchhhhhhhhcccccccCCCCceEEEEEEecCcccccccchhhhhhcchhhhhhhhhHHHHHHHHHh
Confidence 35799999999999999999999999999999999999999999997776677778888899999999999999999999
Q ss_pred CCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcC
Q 002976 87 KIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASL 166 (861)
Q Consensus 87 ~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (861)
+++.++++.||+|..+|+.+||||||++|+++.|..+ ++.+|||+.+..++.+++.|+.+.++.....+..+ ..+
T Consensus 92 k~~~sk~~~iflt~~~w~~~GglpGl~ltl~~~G~~g-~~~l~gP~~l~~~l~~mr~f~~r~~~~l~~~~~~s----~~~ 166 (746)
T KOG2121|consen 92 KIKLSKLDSIFLTRVCWSSCGGLPGLLLTLADIGEPG-PVVLHGPSDLNYILSAMRYFVPRSGMVLTLSIDPS----AEL 166 (746)
T ss_pred hhhhhhhhheEeecccHHHhCCCccceeehhhcCCCC-cccccCchhHHHHHHHHHHhhccCCceeecccCCc----cch
Confidence 9999999999999999999999999999999999775 78899999999999999999988776444333321 011
Q ss_pred CCCccCCCceeEeeCCcEEEEEEEcCCCCCCCCCCCCCCCeeEEEEEeCCccCCCCHHHHHHcCCCCChhhhhhcCCCcE
Q 002976 167 PDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSV 246 (861)
Q Consensus 167 ~~~~~~~~~~~~~~d~~i~V~~~~l~h~~~~~~~~~~~~~s~gY~~~~~~~~gkf~~~ka~~lGv~~g~~~~~L~~G~~V 246 (861)
++.....++...++++..++.++.+.+..............+.|+|+.++.+|+|+++||+++|||+||.+++|++|++|
T Consensus 167 ~~~~~~~~~~~~~~~~v~k~s~~~l~~~~~~~~sg~~~~~~~~y~~~~~~~~G~f~~~kA~~lGvp~Gp~~~~L~~G~~v 246 (746)
T KOG2121|consen 167 YNLSEPVRPCVLFSDEVLKISAINLSPPESPTDSGVKRELVVNYICQLHPIRGKFDVEKAKELGVPKGPLIGKLKSGESV 246 (746)
T ss_pred hhcccCcccccccCccchhhheeecCCcccCCccCChhhheeEEEEecccCCCcccHHHHHHhCCCCCcchhhhcCCCce
Confidence 11000113345677888888888887653221111112467899999999999999999999999999999999999999
Q ss_pred EeCCCceeecCCCccCCCCCCCEEEEEcCCChhHHHHHhhhhccccccccCCCCcccCCceeEEEEeCCCCCCCChHHHH
Q 002976 247 KSDTLDIMVHPSDVLGPSLPGPLVLLVDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHLSPVSVTGTSNYQK 326 (861)
Q Consensus 247 ~l~dg~~~v~p~~v~~~~~~g~~~~ilD~p~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~H~~~~~v~~~~~y~~ 326 (861)
++++|++ +.+.||+||+.||..|+|+|||++.|+++++++.....|.... . ..+.|++|++|.+|+.+++|+.
T Consensus 247 t~~~g~i-~~~~ev~gp~~~~~~f~il~cp~e~~l~~i~~~~~~~~y~~~~----~--~~V~civh~~p~~v~~~~~y~~ 319 (746)
T KOG2121|consen 247 TLDDGTI-VVPSEVVGPSRPGASFLILDCPDESYLNAILENIKKHKYSGLP----D--EPVACIVHITPASVYSSDRYQS 319 (746)
T ss_pred eccCCcE-EehhhhcCCCCCccEEEEecCCcHHHHHHHHhccchhhhccCC----C--cceeEEEEEcccceeccHHHHh
Confidence 9999986 6669999999999999999999999999999987665553311 1 3589999999999999999999
Q ss_pred HHHHcCCC-ceEEeCCCCCCcccccccchHHHHHHHhhhCCCCCCCCCCCCCCCCCCccccCCCCCCCCCceecccceEE
Q 002976 327 WMKRFGSA-QHIMAGHEMKNVEIPILKSSARITTRLNYLCPQLFPASGFWSLPHFNTSAAESSASEGPVPSICAENLLKF 405 (861)
Q Consensus 327 ~~~~~~~~-~Hi~~~~~~~~~~~~~~~~s~~~~~~L~~~~p~~Fp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (861)
||++|++. ||+++++++ +..+.+.++++++++||.++|.+||.+.+|..+....... .+ ...+.++|
T Consensus 320 ~~~~f~s~~qH~~~~~~~--~~~~~~~~~~~~~~~ln~l~p~~Fpl~~~f~~~~s~~~~~--~~--------~~~~~~k~ 387 (746)
T KOG2121|consen 320 WMEKFYSEAQHIILSEEN--AAFPNLRASHRIQAQLNLLLPQVFPLLGSFDVKLSGLGIQ--IP--------SPSNLLKY 387 (746)
T ss_pred hHhhccchhhhhhhcccc--ccccccccHHHHHHhhcccCchhccCcccceeeccCCccc--cc--------CCccccee
Confidence 99999766 999999874 3457889999999999999999999998776543222111 11 12336799
Q ss_pred EeccCcccCCCCCCCCCCCChhHHHHHhhhcChhHHHHHHHHHHhhcCCCcccCCCCCcchhhhhhhcccccCCCCcccc
Q 002976 406 TLRPLANLGIDRTNIPSLEAPSEITNELLSEVPEVVDAAHQISQFWQGPRELKDDCPMLDNEVMIEESWLDENRLPNCLD 485 (861)
Q Consensus 406 ~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (861)
+|+|.. |+|...+- +..+...+-.++.+.... +...+++.++....+|.+.+
T Consensus 388 ~Lrp~~--g~d~~~~~---~~pe~~~~~~~~~~~~~~-----------------------~~~~i~k~~~~~~~~P~~~e 439 (746)
T KOG2121|consen 388 VLRPEG--GIDDEVLF---DIPEEKSEELKQSPNKQK-----------------------RSTKIQKYHLSGDHFPNFAE 439 (746)
T ss_pred EeeccC--CCCcceee---cCchhhhhhhccCcchhc-----------------------chhhhhhhhccCCCCCCccc
Confidence 999986 66622110 111111111111111110 01122233333344565443
Q ss_pred ccCCCccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhc
Q 002976 486 NVRRDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHA 565 (861)
Q Consensus 486 ~~~~~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~ 565 (861)
.++++|+||||||++|+||||+|+++|+++...+||+||||||++||.|+||.+..+..++++++|||||+|+|||+
T Consensus 440 ---~~~~eIi~LGTGSaiPskyRNVSS~lv~i~~~~~IlLDCGEgTlgql~R~YG~~~~~~~lr~LraI~ISHlHADHh~ 516 (746)
T KOG2121|consen 440 ---KKDPEIIFLGTGSAIPSKYRNVSSILVRIDSDDSILLDCGEGTLGQLVRHYGVENVDTALRKLRAIFISHLHADHHL 516 (746)
T ss_pred ---cCCcEEEEecCCccCCCcccceEEEEEeccCCccEEeecCCchHHHHHHHhhhcchHHHHHhHHHHHHHhhcccccc
Confidence 37899999999999999999999999999777789999999999999999998888899999999999999999999
Q ss_pred cHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCcc
Q 002976 566 GLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTE 645 (861)
Q Consensus 566 GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 645 (861)
||+.+|+.|.++.+|....|+.|++|+.+..||++|...... ....|.... .|+.
T Consensus 517 Gl~~vL~~r~k~~k~~~~~pl~vv~P~ql~~wl~~y~~~~~~----------~~~~~~~i~----------~~g~----- 571 (746)
T KOG2121|consen 517 GLISVLQARTKLLKGVENSPLLVVAPRQLKKWLQEYHRCPSF----------PASSVAKIG----------APGA----- 571 (746)
T ss_pred cHHHHHHHHHHhccccccCceEEeChHHHHHHHHHHhcCccc----------chhhhhhhc----------Cchh-----
Confidence 999999999998887667899999999999999999743221 111111110 0000
Q ss_pred ccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccccccCcc
Q 002976 646 GLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV 725 (861)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~~~~~~~ 725 (861)
.|... .|. .+.+ ..+..++.++|+..|.++||.||.++||..|+..
T Consensus 572 ---------lf~~~--------s~~------s~~~--~~~~~~l~~~~l~~i~tc~viHCp~syg~~i~~~--------- 617 (746)
T KOG2121|consen 572 ---------LFAQK--------SPD------SVPE--RLLSYLLRELGLESIQTCPVIHCPQSYGCSITHG--------- 617 (746)
T ss_pred ---------hhhcc--------Ccc------ccch--hhhhHHHHhcCceeEEecCcEecChhhceeEecc---------
Confidence 00000 010 0000 1355677889999999999999999999999983
Q ss_pred cCCcEEEEeCCCCCChhHHhhcCCCcEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHcCCCEEEEeeccCCCCCCccc
Q 002976 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIPVV 805 (861)
Q Consensus 726 ~~G~ki~YsGDT~p~~~l~~~~~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~~~~~~ 805 (861)
.||||+||||||||+.+++++++||||||||||+|+++++|..++|||++||+.+++.|+||++|||||||||++.|..
T Consensus 618 -~~~Ki~YSGDTrP~~~~v~~g~datlLIHEAT~ED~l~EeAv~k~HST~sEAi~V~~~m~ar~liLTHFSQRY~K~pl~ 696 (746)
T KOG2121|consen 618 -SGWKIVYSGDTRPCEDLVKAGKDATLLIHEATLEDDLEEEAVEKGHSTTSEAISVAKKMNAKRLILTHFSQRYPKVPLP 696 (746)
T ss_pred -cceEEEEcCCCCCchhHhhhccCCceEEeehhhchhHHHHHHHhCCCCHHHHHHHHHhccchhhhhhhhhcccCCCCCC
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999999944
Q ss_pred ccccCCceEEeeeCcEEecCCCCCCcchhHHHHHhhcccCCCCCchhhh
Q 002976 806 DETHMHKTCIAFDLMSINLADLPILPKVLPYFKLLFKDEMPVDESDDVV 854 (861)
Q Consensus 806 ~~~~~~~v~~A~D~m~i~l~~~~~~~~~~~~l~~lf~~~~~~~~~~~~~ 854 (861)
.+....++++|||+|.|...|+..++++.|+++.+|.++.+|||+++++
T Consensus 697 ~d~~~~~~~~afd~m~v~~~D~~~~~~~~p~l~~~f~e~~~e~E~~~~~ 745 (746)
T KOG2121|consen 697 SDGEMDPVCVAFDKMAVSVADLQEVPKFEPYLKALFAEEKEEEEERDEK 745 (746)
T ss_pred CccccchHHHhhhcceeeccccchhhhhhhHHHHHhhhhhhhhhhhhcc
Confidence 5555667999999999999999999999999999999999999998875
|
|
| >COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02649 true_RNase_BN ribonuclease BN | Back alignment and domain information |
|---|
| >TIGR02651 RNase_Z ribonuclease Z | Back alignment and domain information |
|---|
| >PRK00055 ribonuclease Z; Reviewed | Back alignment and domain information |
|---|
| >PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02649 true_RNase_BN ribonuclease BN | Back alignment and domain information |
|---|
| >PRK02113 putative hydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional | Back alignment and domain information |
|---|
| >TIGR02651 RNase_Z ribonuclease Z | Back alignment and domain information |
|---|
| >COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B | Back alignment and domain information |
|---|
| >PRK02126 ribonuclease Z; Provisional | Back alignment and domain information |
|---|
| >TIGR03307 PhnP phosphonate metabolism protein PhnP | Back alignment and domain information |
|---|
| >TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type | Back alignment and domain information |
|---|
| >PRK02126 ribonuclease Z; Provisional | Back alignment and domain information |
|---|
| >PRK00055 ribonuclease Z; Reviewed | Back alignment and domain information |
|---|
| >PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A | Back alignment and domain information |
|---|
| >PRK00685 metal-dependent hydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK04286 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00649 MG423 conserved hypothetical protein | Back alignment and domain information |
|---|
| >PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional | Back alignment and domain information |
|---|
| >PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional | Back alignment and domain information |
|---|
| >PRK02113 putative hydrolase; Provisional | Back alignment and domain information |
|---|
| >COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] | Back alignment and domain information |
|---|
| >PF13691 Lactamase_B_4: tRNase Z endonuclease | Back alignment and domain information |
|---|
| >TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein | Back alignment and domain information |
|---|
| >TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type | Back alignment and domain information |
|---|
| >PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B | Back alignment and domain information |
|---|
| >COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >smart00849 Lactamase_B Metallo-beta-lactamase superfamily | Back alignment and domain information |
|---|
| >PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3 | Back alignment and domain information |
|---|
| >COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03307 PhnP phosphonate metabolism protein PhnP | Back alignment and domain information |
|---|
| >PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A | Back alignment and domain information |
|---|
| >KOG1136 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG2121 consensus Predicted metal-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1137 consensus mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification] | Back alignment and domain information |
|---|
| >TIGR00649 MG423 conserved hypothetical protein | Back alignment and domain information |
|---|
| >PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain [] | Back alignment and domain information |
|---|
| >PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A | Back alignment and domain information |
|---|
| >PRK04286 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK00685 metal-dependent hydrolase; Provisional | Back alignment and domain information |
|---|
| >COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] | Back alignment and domain information |
|---|
| >smart00849 Lactamase_B Metallo-beta-lactamase superfamily | Back alignment and domain information |
|---|
| >TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] | Back alignment and domain information |
|---|
| >COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein | Back alignment and domain information |
|---|
| >KOG1361 consensus Predicted hydrolase involved in interstrand cross-link repair [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK10241 hydroxyacylglutathione hydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional | Back alignment and domain information |
|---|
| >COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] | Back alignment and domain information |
|---|
| >COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3798 consensus Predicted Zn-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2 | Back alignment and domain information |
|---|
| >PLN02469 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02398 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain [] | Back alignment and domain information |
|---|
| >PLN02962 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >PRK11539 ComEC family competence protein; Provisional | Back alignment and domain information |
|---|
| >COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] | Back alignment and domain information |
|---|
| >PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional | Back alignment and domain information |
|---|
| >PRK14866 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF13691 Lactamase_B_4: tRNase Z endonuclease | Back alignment and domain information |
|---|
| >TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2 | Back alignment and domain information |
|---|
| >KOG1136 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK10241 hydroxyacylglutathione hydrolase; Provisional | Back alignment and domain information |
|---|
| >PLN02398 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >PLN02469 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >PRK11539 ComEC family competence protein; Provisional | Back alignment and domain information |
|---|
| >KOG0813 consensus Glyoxylase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional | Back alignment and domain information |
|---|
| >KOG1135 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit) [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02962 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >KOG1137 consensus mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3 | Back alignment and domain information |
|---|
| >KOG0813 consensus Glyoxylase [General function prediction only] | Back alignment and domain information |
|---|
| >COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] | Back alignment and domain information |
|---|
| >PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A | Back alignment and domain information |
|---|
| >KOG1135 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit) [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] | Back alignment and domain information |
|---|
| >COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0814 consensus Glyoxylase [General function prediction only] | Back alignment and domain information |
|---|
| >COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >KOG3592 consensus Microtubule-associated proteins [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG3592 consensus Microtubule-associated proteins [Cytoskeleton] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 861 | ||||
| 2cbn_A | 306 | Crystal Structure Of Zipd From Escherichia Coli Len | 3e-19 | ||
| 2fk6_A | 320 | Crystal Structure Of Rnase ZTRNA(THR) COMPLEX Lengt | 9e-08 | ||
| 4gcw_A | 320 | Crystal Structure Of Rnase Z In Complex With Precur | 9e-08 | ||
| 1y44_A | 320 | Crystal Structure Of Rnase Z Length = 320 | 3e-07 | ||
| 3zwf_A | 368 | Crystal Structure Of Human Trnase Z, Short Form (El | 4e-06 | ||
| 1ww1_A | 280 | Crystal Structure Of Trnase Z From Thermotoga Marit | 6e-04 |
| >pdb|2CBN|A Chain A, Crystal Structure Of Zipd From Escherichia Coli Length = 306 | Back alignment and structure |
|
| >pdb|2FK6|A Chain A, Crystal Structure Of Rnase ZTRNA(THR) COMPLEX Length = 320 | Back alignment and structure |
| >pdb|4GCW|A Chain A, Crystal Structure Of Rnase Z In Complex With Precursor Trna(Thr) Length = 320 | Back alignment and structure |
| >pdb|1Y44|A Chain A, Crystal Structure Of Rnase Z Length = 320 | Back alignment and structure |
| >pdb|3ZWF|A Chain A, Crystal Structure Of Human Trnase Z, Short Form (Elac1). Length = 368 | Back alignment and structure |
| >pdb|1WW1|A Chain A, Crystal Structure Of Trnase Z From Thermotoga Maritima Length = 280 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* Length = 320 | Back alignment and structure |
|---|
Score = 259 bits (664), Expect = 7e-80
Identities = 86/351 (24%), Positives = 142/351 (40%), Gaps = 43/351 (12%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGS--LLLDCGEGTLGQLKRRYGVEGADSAVR 549
+E++ LGTG+ P+K RNV+S+ + L + L DCGE T Q+ + R
Sbjct: 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQM-LHTTI-----KPR 54
Query: 550 KLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDM 609
K+ I+I+H+H DH GL +L R +G L V GP +K +++ + +
Sbjct: 55 KIEKIFITHMHGDHVYGLPGLLGSRS--FQGGED-ELTVYGPKGIKAFIETSLAVTKTHL 111
Query: 610 QFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGP 669
+ E FE + V +S + + E ++ GS V K
Sbjct: 112 TYPLAIQEIE-EGIVFEDDQFIVTAVSVIHGVEAFGYRV--QEKDV--PGSLKADVLKEM 166
Query: 670 GIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGW 729
IP + +K + V E G + + + G
Sbjct: 167 NIPP--GPVYQKIKKGETVTLEDGRI-----------------INGNDF---LEPPKKGR 204
Query: 730 KIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYR 789
+V+SGDTR +L E +R V++HEATF + A HSTT++A A +
Sbjct: 205 SVVFSGDTRVSDKLKELARDCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQ 264
Query: 790 IILTHFSQRYPKIPVVD-----ETHMHKTCIAFDLMSINLADLPILPKVLP 835
+ILTH S RY ++ + A+D + +N+ + +
Sbjct: 265 LILTHISARYQGDASLELQKEAVDVFPNSVAAYDFLEVNVPRGKLAAALEH 315
|
| >1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* Length = 320 | Back alignment and structure |
|---|
| >2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 Length = 306 | Back alignment and structure |
|---|
| >2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 Length = 306 | Back alignment and structure |
|---|
| >3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
| >3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
| >1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Length = 268 | Back alignment and structure |
|---|
| >1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Length = 268 | Back alignment and structure |
|---|
| >1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Length = 268 | Back alignment and structure |
|---|
| >2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A Length = 280 | Back alignment and structure |
|---|
| >2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A Length = 280 | Back alignment and structure |
|---|
| >2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A Length = 280 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A Length = 258 | Back alignment and structure |
|---|
| >3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} PDB: 1xto_A Length = 321 | Back alignment and structure |
|---|
| >1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Length = 269 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 861 | |||
| 3zwf_A | 368 | Zinc phosphodiesterase ELAC protein 1; beta-lactam | 100.0 | |
| 2cbn_A | 306 | Ribonuclease Z; phosphodiesterase beta lactamase t | 100.0 | |
| 1y44_A | 320 | Ribonuclease Z; zinc-dependent metal hydrolase, hy | 100.0 | |
| 3zwf_A | 368 | Zinc phosphodiesterase ELAC protein 1; beta-lactam | 100.0 | |
| 1zkp_A | 268 | Hypothetical protein BA1088; zinc binding protein, | 99.98 | |
| 3jxp_A | 321 | Coenzyme PQQ synthesis protein B; alpha-beta prote | 99.98 | |
| 3md7_A | 293 | Beta-lactamase-like; ssgcid, hydrolase, structural | 99.97 | |
| 3g1p_A | 258 | Protein PHNP; C-P lyase, phosphodiesterase, phosph | 99.97 | |
| 2e7y_A | 280 | TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, | 99.95 | |
| 2cbn_A | 306 | Ribonuclease Z; phosphodiesterase beta lactamase t | 99.95 | |
| 1y44_A | 320 | Ribonuclease Z; zinc-dependent metal hydrolase, hy | 99.94 | |
| 2az4_A | 429 | Hypothetical protein EF2904; structural genomics, | 99.84 | |
| 3bv6_A | 379 | Metal-dependent hydrolase; metallo protein, beta-l | 99.82 | |
| 3kl7_A | 235 | Putative metal-dependent hydrolase; structural gen | 99.82 | |
| 2wyl_A | 360 | L-ascorbate-6-phosphate lactonase ULAG; hydrolase; | 99.82 | |
| 3bk2_A | 562 | RNAse J, metal dependent hydrolase; endoribonuclea | 99.79 | |
| 3rpc_A | 264 | Possible metal-dependent hydrolase; structural gen | 99.79 | |
| 3iek_A | 431 | Ribonuclease TTHA0252; metallo beta lactamase fold | 99.77 | |
| 1vjn_A | 220 | Zn-dependent hydrolase of metallo-beta-lactamase s | 99.73 | |
| 2i7t_A | 459 | Cleavage and polyadenylation specificity factor 73 | 99.71 | |
| 3af5_A | 651 | Putative uncharacterized protein PH1404; archaeal | 99.7 | |
| 2ycb_A | 636 | Beta-CAsp RNAse, cleavage and polyadenylation spec | 99.68 | |
| 3zq4_A | 555 | Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat | 99.67 | |
| 2p4z_A | 284 | Metal-dependent hydrolases of the beta-lactamase s | 99.65 | |
| 2xr1_A | 640 | Cleavage and polyadenylation specificity factor 1 | 99.65 | |
| 2i7x_A | 717 | Protein CFT2; polyadenylation, metallo-B-lactamase | 99.63 | |
| 4b87_A | 367 | DNA cross-LINK repair 1A protein; dclre1A, DCLRE, | 99.55 | |
| 3md7_A | 293 | Beta-lactamase-like; ssgcid, hydrolase, structural | 99.52 | |
| 3jxp_A | 321 | Coenzyme PQQ synthesis protein B; alpha-beta prote | 99.5 | |
| 1zkp_A | 268 | Hypothetical protein BA1088; zinc binding protein, | 99.45 | |
| 2e7y_A | 280 | TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, | 99.45 | |
| 3zdk_A | 336 | 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A | 99.45 | |
| 3g1p_A | 258 | Protein PHNP; C-P lyase, phosphodiesterase, phosph | 99.42 | |
| 1ztc_A | 221 | Hypothetical protein TM0894; structural genomics, | 99.23 | |
| 3dha_A | 254 | N-acyl homoserine lactone hydrolase; zinc bimetall | 99.18 | |
| 3aj3_A | 274 | MLR6805 protein, 4-pyridoxolactonase; Zn-protein, | 99.17 | |
| 2r2d_A | 276 | AGR_PTI_140P, Zn-dependent hydrolases; lactonase, | 99.15 | |
| 2bib_A | 547 | CBPE, teichoic acid phosphorylcholine esterase/ ch | 99.14 | |
| 3adr_A | 261 | Putative uncharacterized protein ST1585; quorum se | 99.13 | |
| 3m8t_A | 294 | 'BLR6230 protein; subclass B3 beta-lactamase, zinc | 99.08 | |
| 1k07_A | 263 | FEZ-1 beta-lactamase; monomer with alpha-beta/BETA | 99.02 | |
| 2az4_A | 429 | Hypothetical protein EF2904; structural genomics, | 99.02 | |
| 3bk2_A | 562 | RNAse J, metal dependent hydrolase; endoribonuclea | 98.98 | |
| 3iek_A | 431 | Ribonuclease TTHA0252; metallo beta lactamase fold | 98.93 | |
| 2zwr_A | 207 | Metallo-beta-lactamase superfamily protein; hydrol | 98.91 | |
| 2i7t_A | 459 | Cleavage and polyadenylation specificity factor 73 | 98.89 | |
| 1p9e_A | 331 | Methyl parathion hydrolase; Zn containing; 2.40A { | 98.88 | |
| 1sml_A | 269 | Protein (penicillinase); metallo-beta-lactamase, a | 98.87 | |
| 4efz_A | 298 | Metallo-beta-lactamase family protein; structural | 98.86 | |
| 3zq4_A | 555 | Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat | 98.85 | |
| 3l6n_A | 219 | Metallo-beta-lactamase; zinc, hydolase, antibiotic | 98.83 | |
| 1e5d_A | 402 | Rubredoxin\:oxygen oxidoreductase; oxygenreductase | 98.83 | |
| 2xf4_A | 210 | Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A | 98.83 | |
| 3esh_A | 280 | Protein similar to metal-dependent hydrolase; stru | 98.79 | |
| 1ycg_A | 398 | Nitric oxide reductase; DIIRON site, oxidoreductas | 98.79 | |
| 2ycb_A | 636 | Beta-CAsp RNAse, cleavage and polyadenylation spec | 98.78 | |
| 2ohh_A | 404 | Type A flavoprotein FPRA; beta-lactamase like doma | 98.78 | |
| 2gcu_A | 245 | Putative hydroxyacylglutathione hydrolase 3; ethyl | 98.78 | |
| 2qed_A | 258 | Hydroxyacylglutathione hydrolase; metallo-B- super | 98.77 | |
| 3kl7_A | 235 | Putative metal-dependent hydrolase; structural gen | 98.77 | |
| 2wyl_A | 360 | L-ascorbate-6-phosphate lactonase ULAG; hydrolase; | 98.76 | |
| 3af5_A | 651 | Putative uncharacterized protein PH1404; archaeal | 98.75 | |
| 3hnn_A | 262 | Putative diflavin flavoprotein A 5; PSI-2, protein | 98.74 | |
| 1qh5_A | 260 | Glyoxalase II, protein (hydroxyacylglutathione hyd | 98.74 | |
| 2p18_A | 311 | Glyoxalase II; metalloprotein, beta sandwich, alph | 98.73 | |
| 4ad9_A | 289 | Lactb2, beta-lactamase-like protein 2; hydrolase, | 98.72 | |
| 2i7x_A | 717 | Protein CFT2; polyadenylation, metallo-B-lactamase | 98.71 | |
| 4ax1_B | 303 | Metallo-beta-lactamase AIM-1; hydrolase, antibioti | 98.7 | |
| 2vw8_A | 303 | PA1000, PQSE; quinolone signal response protein, s | 98.7 | |
| 3bv6_A | 379 | Metal-dependent hydrolase; metallo protein, beta-l | 98.7 | |
| 1m2x_A | 223 | Class B carbapenemase BLAB-1; alpha-beta/BETA-alph | 98.7 | |
| 1a7t_A | 232 | Metallo-beta-lactamase; hydrolase (beta-lactamase) | 98.68 | |
| 2xr1_A | 640 | Cleavage and polyadenylation specificity factor 1 | 98.67 | |
| 2zo4_A | 317 | Metallo-beta-lactamase family protein; hydrolase; | 98.67 | |
| 3m8t_A | 294 | 'BLR6230 protein; subclass B3 beta-lactamase, zinc | 98.67 | |
| 1xm8_A | 254 | Glyoxalase II; structural genomics, protein struct | 98.66 | |
| 4hl2_A | 243 | Beta-lactamase NDM-1; structural genomics, PSI-bio | 98.66 | |
| 1mqo_A | 227 | Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd | 98.65 | |
| 1sml_A | 269 | Protein (penicillinase); metallo-beta-lactamase, a | 98.61 | |
| 3q6v_A | 233 | Beta-lactamase; metalloenzyme, alpha-beta, hydrola | 98.6 | |
| 3tp9_A | 474 | Beta-lactamase and rhodanese domain protein; struc | 98.59 | |
| 1k07_A | 263 | FEZ-1 beta-lactamase; monomer with alpha-beta/BETA | 98.59 | |
| 2q9u_A | 414 | A-type flavoprotein; flavodoxin like, beta lactama | 98.55 | |
| 3dha_A | 254 | N-acyl homoserine lactone hydrolase; zinc bimetall | 98.49 | |
| 2p4z_A | 284 | Metal-dependent hydrolases of the beta-lactamase s | 98.46 | |
| 3iog_A | 227 | Beta-lactamase; hydrolase, antibiotic resistance, | 98.45 | |
| 2y8b_A | 265 | Metallo-B-lactamase; hydrolase, cephalosporins, an | 98.43 | |
| 1ztc_A | 221 | Hypothetical protein TM0894; structural genomics, | 98.42 | |
| 3aj3_A | 274 | MLR6805 protein, 4-pyridoxolactonase; Zn-protein, | 98.42 | |
| 1jjt_A | 228 | IMP-1 metallo beta-lactamase; metallo-beta-lactama | 98.41 | |
| 2fhx_A | 246 | SPM-1; metallo-beta-lactamase, dinuclear zinc, ant | 98.41 | |
| 4ax1_B | 303 | Metallo-beta-lactamase AIM-1; hydrolase, antibioti | 98.4 | |
| 3h3e_A | 267 | Uncharacterized protein TM1679; structural genomic | 98.39 | |
| 3adr_A | 261 | Putative uncharacterized protein ST1585; quorum se | 98.37 | |
| 2zwr_A | 207 | Metallo-beta-lactamase superfamily protein; hydrol | 98.37 | |
| 4efz_A | 298 | Metallo-beta-lactamase family protein; structural | 98.33 | |
| 3r2u_A | 466 | Metallo-beta-lactamase family protein; structural | 98.33 | |
| 3rpc_A | 264 | Possible metal-dependent hydrolase; structural gen | 98.31 | |
| 4dik_A | 410 | Flavoprotein; TM0755, electron transport, DI-iron | 98.27 | |
| 2bib_A | 547 | CBPE, teichoic acid phosphorylcholine esterase/ ch | 98.25 | |
| 3l6n_A | 219 | Metallo-beta-lactamase; zinc, hydolase, antibiotic | 98.24 | |
| 2xf4_A | 210 | Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A | 98.22 | |
| 2gcu_A | 245 | Putative hydroxyacylglutathione hydrolase 3; ethyl | 98.2 | |
| 2r2d_A | 276 | AGR_PTI_140P, Zn-dependent hydrolases; lactonase, | 98.18 | |
| 4eyb_A | 270 | Beta-lactamase NDM-1; metallo beta lactamase, anti | 98.17 | |
| 2ohh_A | 404 | Type A flavoprotein FPRA; beta-lactamase like doma | 98.16 | |
| 1xm8_A | 254 | Glyoxalase II; structural genomics, protein struct | 98.15 | |
| 1e5d_A | 402 | Rubredoxin\:oxygen oxidoreductase; oxygenreductase | 98.14 | |
| 1ycg_A | 398 | Nitric oxide reductase; DIIRON site, oxidoreductas | 98.1 | |
| 2qed_A | 258 | Hydroxyacylglutathione hydrolase; metallo-B- super | 98.06 | |
| 1m2x_A | 223 | Class B carbapenemase BLAB-1; alpha-beta/BETA-alph | 98.04 | |
| 4b87_A | 367 | DNA cross-LINK repair 1A protein; dclre1A, DCLRE, | 98.03 | |
| 2p18_A | 311 | Glyoxalase II; metalloprotein, beta sandwich, alph | 98.01 | |
| 3tp9_A | 474 | Beta-lactamase and rhodanese domain protein; struc | 97.98 | |
| 1p9e_A | 331 | Methyl parathion hydrolase; Zn containing; 2.40A { | 97.97 | |
| 1mqo_A | 227 | Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd | 97.95 | |
| 1qh5_A | 260 | Glyoxalase II, protein (hydroxyacylglutathione hyd | 97.95 | |
| 1a7t_A | 232 | Metallo-beta-lactamase; hydrolase (beta-lactamase) | 97.94 | |
| 2zo4_A | 317 | Metallo-beta-lactamase family protein; hydrolase; | 97.92 | |
| 2p97_A | 201 | Hypothetical protein; putative metal-dependent hyd | 97.92 | |
| 3esh_A | 280 | Protein similar to metal-dependent hydrolase; stru | 97.88 | |
| 2vw8_A | 303 | PA1000, PQSE; quinolone signal response protein, s | 97.79 | |
| 4hl2_A | 243 | Beta-lactamase NDM-1; structural genomics, PSI-bio | 97.77 | |
| 3iog_A | 227 | Beta-lactamase; hydrolase, antibiotic resistance, | 97.77 | |
| 4ad9_A | 289 | Lactb2, beta-lactamase-like protein 2; hydrolase, | 97.73 | |
| 3r2u_A | 466 | Metallo-beta-lactamase family protein; structural | 97.71 | |
| 3q6v_A | 233 | Beta-lactamase; metalloenzyme, alpha-beta, hydrola | 97.69 | |
| 3hnn_A | 262 | Putative diflavin flavoprotein A 5; PSI-2, protein | 97.67 | |
| 1jjt_A | 228 | IMP-1 metallo beta-lactamase; metallo-beta-lactama | 97.67 | |
| 2q9u_A | 414 | A-type flavoprotein; flavodoxin like, beta lactama | 97.65 | |
| 2y8b_A | 265 | Metallo-B-lactamase; hydrolase, cephalosporins, an | 97.64 | |
| 3h3e_A | 267 | Uncharacterized protein TM1679; structural genomic | 97.63 | |
| 1vjn_A | 220 | Zn-dependent hydrolase of metallo-beta-lactamase s | 97.52 | |
| 4dik_A | 410 | Flavoprotein; TM0755, electron transport, DI-iron | 97.47 | |
| 2cfu_A | 658 | SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1 | 97.34 | |
| 3zdk_A | 336 | 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A | 97.32 | |
| 2fhx_A | 246 | SPM-1; metallo-beta-lactamase, dinuclear zinc, ant | 97.29 | |
| 2yhe_A | 668 | SEC-alkyl sulfatase; hydrolase, inversion, metallo | 95.99 | |
| 2cfu_A | 658 | SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1 | 96.75 | |
| 4eyb_A | 270 | Beta-lactamase NDM-1; metallo beta lactamase, anti | 96.63 | |
| 2p97_A | 201 | Hypothetical protein; putative metal-dependent hyd | 96.53 | |
| 2yhe_A | 668 | SEC-alkyl sulfatase; hydrolase, inversion, metallo | 95.14 |
| >3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=354.24 Aligned_cols=294 Identities=27% Similarity=0.378 Sum_probs=197.4
Q ss_pred cEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHH
Q 002976 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARIL 571 (861)
Q Consensus 492 ~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll 571 (861)
|+|+|||||+++|++.|++||++|+. ++..+|||||+|++.+|.+ .+.. +.+|++|||||.|+||++|++.|+
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~-~~~~iLiD~G~g~~~~l~~-~~~~-----~~~id~I~iTH~H~DHi~gl~~l~ 73 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRC-EGECWLFDCGEGTQTQLMK-SQLK-----AGRITKIFITHLHGDHFFGLPGLL 73 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEE-TTEEEEECCCTTHHHHHHH-SSSC-----GGGEEEEECCCSSGGGTTTHHHHH
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEE-CCeEEEEeCChhHHHHHHH-cCCC-----hHHCCEEEECCCChHHhCcHHHHH
Confidence 79999999999999999999999998 7889999999999999987 4542 478999999999999999999998
Q ss_pred HHHHHhhcCC---CCCCeEEEeCchHHHHHHHHHhcccc--cc--eeeecccccccccccccCCCCCcccCCCCCCCCCc
Q 002976 572 ALRRDLLKGV---PHEPLLVVGPGPLKRYLDAYERLEDL--DM--QFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFST 644 (861)
Q Consensus 572 ~~~~~~~~g~---~~~pl~I~~p~~~~~~L~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 644 (861)
..+... +. +..++.||+|.++.++++....+... .+ .+....... .. . +....
T Consensus 74 ~~~~~~--~~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~~~~~~~~el~~~~----~~----------~--~~~~~-- 133 (368)
T 3zwf_A 74 CTISLQ--SGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTA----DQ----------C--PAEEL-- 133 (368)
T ss_dssp HHHHHH--C------CCEEEEEETTHHHHHHHHHHHTTCCCSSCEEEEEECCCG----GG----------S--CC-----
T ss_pred HHhhhc--cccccCCCCeEEEEcHHHHHHHHHHHHhhCcCCCceEEEEEeecCc----cc----------c--ccccc--
Confidence 765421 21 12589999999999999876543221 11 111110000 00 0 00000
Q ss_pred cccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccc-----
Q 002976 645 EGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERI----- 719 (861)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~----- 719 (861)
. ....+....... ...++..+.-...... ..+.+.+.++|+++|+.|..+|+||+|+..++.
T Consensus 134 ~------~~~~~~~~~~~~--~~~~g~~i~~~~~~~~-----~~~~~~~~~~V~a~~~~H~vp~~gy~i~e~~~~g~~~~ 200 (368)
T 3zwf_A 134 K------EFAHVNRADSPP--KEEQGRTILLDSEENS-----YLLFDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNA 200 (368)
T ss_dssp ------------------------CCCEECCBTTTTB-----EEEEECSSEEEEEEEEESSSCEEEEEEEECC-------
T ss_pred c------ccccccccccCc--ccccccccccccccCc-----eeEEeCCCEEEEEEeccCCCceEEEEEEecCCcCccCH
Confidence 0 000000000000 0000100000000000 000123668999999999999999999854210
Q ss_pred ----------------------------------cccCcccCCcEEEEeCCCCC--ChhHHhhcCCCcEEEEeccCCCCh
Q 002976 720 ----------------------------------NSVGKVIPGWKIVYSGDTRP--CPELVEASRGATVLIHEATFEDGM 763 (861)
Q Consensus 720 ----------------------------------~~~~~~~~G~ki~YsGDT~p--~~~l~~~~~~aDlLIhEaTf~d~~ 763 (861)
+.+++..+|++|+|+|||++ ++.+++.++++|+|||||||.+++
T Consensus 201 ek~~~~gip~G~~~~~Lk~G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT~~~~~~~~~~~~~~~Dlli~Eat~~~~~ 280 (368)
T 3zwf_A 201 QKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLDDAQ 280 (368)
T ss_dssp -----------------------------------------CCCEEEEECSCSEECSSHHHHHTTTCSEEEEECCSCGGG
T ss_pred HHHHHcCCCchHHHHhcCCCCeEEecCCEEEEhHHhccccccceEEEEEecCCcccchhHHHHhcCCCEEEEecCCChHH
Confidence 11223345899999999999 999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHcCCCEEEEeeccCCCCC-----------Cccc-ccc---cCC-ceEEeeeCcEEecC
Q 002976 764 MEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPK-----------IPVV-DET---HMH-KTCIAFDLMSINLA 825 (861)
Q Consensus 764 ~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~~-----------~~~~-~~~---~~~-~v~~A~D~m~i~l~ 825 (861)
.+.|..++|||++||+++|+++++|+++|||||+||.. ...+ +++ +.+ ++.+|.|||++++.
T Consensus 281 ~~~a~~~~H~t~~~A~~~a~~~~~k~lil~H~s~ry~~~~~~~~~~~~~~~~~~~ea~~~f~~~~~~~a~dg~~~~i~ 358 (368)
T 3zwf_A 281 MDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLDLQEVTLAEDFMVISIP 358 (368)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHTTCSEEEEECBCCCC---------------------------CEEEECCTTCEEECC
T ss_pred HhhhhcCCCCCHHHHHHHHHHcCCCEEEEEeeCcccCccccccccccchHHHHHHHHHHhcCCCceEEecCCcEEEee
Confidence 88899999999999999999999999999999999972 1222 221 223 79999999999995
|
| >2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 | Back alignment and structure |
|---|
| >1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* | Back alignment and structure |
|---|
| >3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 | Back alignment and structure |
|---|
| >3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A | Back alignment and structure |
|---|
| >3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A* | Back alignment and structure |
|---|
| >3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A | Back alignment and structure |
|---|
| >2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A | Back alignment and structure |
|---|
| >2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 | Back alignment and structure |
|---|
| >1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* | Back alignment and structure |
|---|
| >2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 | Back alignment and structure |
|---|
| >3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor} | Back alignment and structure |
|---|
| >3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
| >2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A* | Back alignment and structure |
|---|
| >3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* | Back alignment and structure |
|---|
| >3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula} | Back alignment and structure |
|---|
| >3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A* | Back alignment and structure |
|---|
| >1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4 | Back alignment and structure |
|---|
| >2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A | Back alignment and structure |
|---|
| >3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* | Back alignment and structure |
|---|
| >2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} | Back alignment and structure |
|---|
| >3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
| >2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
| >2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 | Back alignment and structure |
|---|
| >4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens} | Back alignment and structure |
|---|
| >3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A* | Back alignment and structure |
|---|
| >3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A | Back alignment and structure |
|---|
| >1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 | Back alignment and structure |
|---|
| >2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A | Back alignment and structure |
|---|
| >3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens} | Back alignment and structure |
|---|
| >3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A | Back alignment and structure |
|---|
| >1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 | Back alignment and structure |
|---|
| >3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A | Back alignment and structure |
|---|
| >3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A | Back alignment and structure |
|---|
| >2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A* | Back alignment and structure |
|---|
| >3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A | Back alignment and structure |
|---|
| >1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A | Back alignment and structure |
|---|
| >2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 | Back alignment and structure |
|---|
| >3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* | Back alignment and structure |
|---|
| >3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A* | Back alignment and structure |
|---|
| >2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A | Back alignment and structure |
|---|
| >2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A | Back alignment and structure |
|---|
| >1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 | Back alignment and structure |
|---|
| >1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A | Back alignment and structure |
|---|
| >4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
| >3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0 | Back alignment and structure |
|---|
| >1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 | Back alignment and structure |
|---|
| >2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} | Back alignment and structure |
|---|
| >3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* | Back alignment and structure |
|---|
| >2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} | Back alignment and structure |
|---|
| >2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* | Back alignment and structure |
|---|
| >2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 | Back alignment and structure |
|---|
| >3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
| >2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A* | Back alignment and structure |
|---|
| >3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* | Back alignment and structure |
|---|
| >1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* | Back alignment and structure |
|---|
| >2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* | Back alignment and structure |
|---|
| >4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 | Back alignment and structure |
|---|
| >4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B | Back alignment and structure |
|---|
| >2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* | Back alignment and structure |
|---|
| >3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor} | Back alignment and structure |
|---|
| >1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 | Back alignment and structure |
|---|
| >1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* | Back alignment and structure |
|---|
| >2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A | Back alignment and structure |
|---|
| >1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A | Back alignment and structure |
|---|
| >4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A | Back alignment and structure |
|---|
| >1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... | Back alignment and structure |
|---|
| >1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A | Back alignment and structure |
|---|
| >3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A | Back alignment and structure |
|---|
| >3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A | Back alignment and structure |
|---|
| >2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} | Back alignment and structure |
|---|
| >3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A | Back alignment and structure |
|---|
| >2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
| >3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A | Back alignment and structure |
|---|
| >2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A | Back alignment and structure |
|---|
| >1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 | Back alignment and structure |
|---|
| >3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A | Back alignment and structure |
|---|
| >1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A | Back alignment and structure |
|---|
| >2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B | Back alignment and structure |
|---|
| >3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A | Back alignment and structure |
|---|
| >4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
| >3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula} | Back alignment and structure |
|---|
| >4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* | Back alignment and structure |
|---|
| >2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A* | Back alignment and structure |
|---|
| >3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0 | Back alignment and structure |
|---|
| >2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} | Back alignment and structure |
|---|
| >2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A | Back alignment and structure |
|---|
| >2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* | Back alignment and structure |
|---|
| >1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A | Back alignment and structure |
|---|
| >1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 | Back alignment and structure |
|---|
| >1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* | Back alignment and structure |
|---|
| >2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 | Back alignment and structure |
|---|
| >1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 | Back alignment and structure |
|---|
| >4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens} | Back alignment and structure |
|---|
| >2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* | Back alignment and structure |
|---|
| >3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 | Back alignment and structure |
|---|
| >1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... | Back alignment and structure |
|---|
| >1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* | Back alignment and structure |
|---|
| >1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* | Back alignment and structure |
|---|
| >2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 | Back alignment and structure |
|---|
| >3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* | Back alignment and structure |
|---|
| >4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A | Back alignment and structure |
|---|
| >3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A | Back alignment and structure |
|---|
| >4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A | Back alignment and structure |
|---|
| >1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A | Back alignment and structure |
|---|
| >2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} | Back alignment and structure |
|---|
| >2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A | Back alignment and structure |
|---|
| >3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4 | Back alignment and structure |
|---|
| >4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* | Back alignment and structure |
|---|
| >2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* | Back alignment and structure |
|---|
| >3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens} | Back alignment and structure |
|---|
| >2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} | Back alignment and structure |
|---|
| >2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* | Back alignment and structure |
|---|
| >4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A | Back alignment and structure |
|---|
| >2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 | Back alignment and structure |
|---|
| >2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 861 | ||||
| d1y44a1 | 307 | d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Baci | 2e-39 | |
| d1y44a1 | 307 | d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Baci | 2e-11 | |
| d2cbna1 | 305 | d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Esch | 9e-37 | |
| d2cbna1 | 305 | d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Esch | 3e-10 | |
| d2e7ya1 | 280 | d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Ther | 1e-24 | |
| d2e7ya1 | 280 | d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Ther | 6e-08 | |
| d1xtoa_ | 304 | d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, P | 3e-20 | |
| d1zkpa1 | 244 | d.157.1.9 (A:1-244) Hypothetical protein BA1088 (B | 3e-12 | |
| d1zkpa1 | 244 | d.157.1.9 (A:1-244) Hypothetical protein BA1088 (B | 5e-07 | |
| d2dkfa1 | 431 | d.157.1.10 (A:1-431) Putative RNA-degradation prot | 5e-04 |
| >d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: RNase Z-like domain: Ribonuclease Z (RNase Z) species: Bacillus subtilis [TaxId: 1423]
Score = 146 bits (369), Expect = 2e-39
Identities = 78/341 (22%), Positives = 133/341 (39%), Gaps = 45/341 (13%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGS--LLLDCGEGTLGQLKRRYGVEGADSAVR 549
+E++ LGTG+ P+K RNV+S+ + L + L DCGE T Q+ R
Sbjct: 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQMLH------TTIKPR 54
Query: 550 KLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDM 609
K+ I+I+H+H DH GL +L R + L V GP +K +++ + +
Sbjct: 55 KIEKIFITHMHGDHVYGLPGLLGSRSF---QGGEDELTVYGPKGIKAFIETSLAVTKTHL 111
Query: 610 QF-LHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
+ L + E + + ++ F +L A ++ G
Sbjct: 112 TYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGYRVQEKDVPGSLKADVLKEMNIPPG 171
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPG 728
P + + + TL +++ G
Sbjct: 172 P---------------VYQKIKKGETVTLEDGRIINGNDFLEP-------------PKKG 203
Query: 729 WKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVY 788
+V+SGDTR +L E +R V++HEATF + A HSTT++A A
Sbjct: 204 RSVVFSGDTRVSDKLKELARDCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAK 263
Query: 789 RIILTHFSQRYPKIPVVD-----ETHMHKTCIAFDLMSINL 824
++ILTH S RY ++ + A+D + +N+
Sbjct: 264 QLILTHISARYQGDASLELQKEAVDVFPNSVAAYDFLEVNV 304
|
| >d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} Length = 307 | Back information, alignment and structure |
|---|
| >d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} Length = 305 | Back information, alignment and structure |
|---|
| >d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} Length = 305 | Back information, alignment and structure |
|---|
| >d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Length = 280 | Back information, alignment and structure |
|---|
| >d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Length = 280 | Back information, alignment and structure |
|---|
| >d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Length = 304 | Back information, alignment and structure |
|---|
| >d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Length = 244 | Back information, alignment and structure |
|---|
| >d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Length = 244 | Back information, alignment and structure |
|---|
| >d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Length = 431 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 861 | |||
| d1y44a1 | 307 | Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId | 100.0 | |
| d2cbna1 | 305 | Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: | 100.0 | |
| d1zkpa1 | 244 | Hypothetical protein BA1088 (BAS1016) {Bacillus an | 100.0 | |
| d1xtoa_ | 304 | Coenzyme PQQ synthesis protein B, PqqB {Pseudomona | 99.97 | |
| d2cbna1 | 305 | Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: | 99.96 | |
| d1y44a1 | 307 | Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId | 99.95 | |
| d2e7ya1 | 280 | Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax | 99.94 | |
| d2dkfa1 | 431 | Putative RNA-degradation protein TTHA0252 {Thermus | 99.69 | |
| d2az4a1 | 183 | Hypothetical protein EF2904 {Enterococcus faecalis | 99.63 | |
| d1zkpa1 | 244 | Hypothetical protein BA1088 (BAS1016) {Bacillus an | 99.62 | |
| d1xtoa_ | 304 | Coenzyme PQQ synthesis protein B, PqqB {Pseudomona | 99.51 | |
| d2i7ta1 | 451 | Cleavage and polyadenylation specificity factor su | 99.49 | |
| d1vjna_ | 209 | Hypothetical protein TM0207 {Thermotoga maritima [ | 99.41 | |
| d2e7ya1 | 280 | Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax | 99.36 | |
| d2i7xa1 | 514 | Cleavage factor two protein 2, CFT2 {Baker's yeast | 99.36 | |
| d2dkfa1 | 431 | Putative RNA-degradation protein TTHA0252 {Thermus | 99.11 | |
| d1ztca1 | 207 | Hypothetical protein TM0894 {Thermotoga maritima [ | 99.06 | |
| d2i7ta1 | 451 | Cleavage and polyadenylation specificity factor su | 98.84 | |
| d1p9ea_ | 294 | Methyl parathion hydrolase {Pseudomonas sp. WBC-3 | 98.82 | |
| d2i7xa1 | 514 | Cleavage factor two protein 2, CFT2 {Baker's yeast | 98.68 | |
| d1k07a_ | 262 | Zn metallo-beta-lactamase {Fluoribacter gormanii, | 98.68 | |
| d1wraa1 | 305 | Teichoic acid phosphorylcholine esterase Pce (LytD | 98.65 | |
| d1ztca1 | 207 | Hypothetical protein TM0894 {Thermotoga maritima [ | 98.56 | |
| d2q0ia1 | 298 | Quinolone signal response protein PqsE {Pseudomona | 98.46 | |
| d1ycga2 | 249 | Nitric oxide reductase N-terminal domain {Moorella | 98.46 | |
| d1vmea2 | 250 | ROO-like flavoprotein TM0755, N-terminal domain {T | 98.43 | |
| d1e5da2 | 249 | Rubredoxin oxygen:oxidoreductase (ROO), N-terminal | 98.42 | |
| d2aioa1 | 266 | Zn metallo-beta-lactamase {Xanthomonas maltophilia | 98.41 | |
| d2az4a1 | 183 | Hypothetical protein EF2904 {Enterococcus faecalis | 98.29 | |
| d2gmna1 | 264 | Zn metallo-beta-lactamase {Bradyrhizobium japonicu | 98.27 | |
| d2aioa1 | 266 | Zn metallo-beta-lactamase {Xanthomonas maltophilia | 98.22 | |
| d1p9ea_ | 294 | Methyl parathion hydrolase {Pseudomonas sp. WBC-3 | 98.19 | |
| d2gmna1 | 264 | Zn metallo-beta-lactamase {Bradyrhizobium japonicu | 98.16 | |
| d1k07a_ | 262 | Zn metallo-beta-lactamase {Fluoribacter gormanii, | 98.11 | |
| d1wraa1 | 305 | Teichoic acid phosphorylcholine esterase Pce (LytD | 98.1 | |
| d1ko3a_ | 230 | Zn metallo-beta-lactamase {Pseudomonas aeruginosa, | 98.04 | |
| d2qeda1 | 251 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 98.04 | |
| d1qh5a_ | 260 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 98.03 | |
| d1xm8a_ | 254 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 97.99 | |
| d1mqoa_ | 221 | Zn metallo-beta-lactamase {Bacillus cereus [TaxId: | 97.94 | |
| d2q0ia1 | 298 | Quinolone signal response protein PqsE {Pseudomona | 97.89 | |
| d1m2xa_ | 219 | Zn metallo-beta-lactamase {Chryseobacterium mening | 97.88 | |
| d1znba_ | 230 | Zn metallo-beta-lactamase {Bacteroides fragilis [T | 97.79 | |
| d1x8ha_ | 228 | Zn metallo-beta-lactamase {Aeromonas hydrophila, C | 97.66 | |
| d1jjta_ | 220 | Zn metallo-beta-lactamase {Pseudomonas aeruginosa, | 97.65 | |
| d1vmea2 | 250 | ROO-like flavoprotein TM0755, N-terminal domain {T | 97.56 | |
| d1xm8a_ | 254 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 97.5 | |
| d1qh5a_ | 260 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 97.48 | |
| d2qeda1 | 251 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 97.35 | |
| d2cfua2 | 505 | Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI | 97.35 | |
| d1x8ha_ | 228 | Zn metallo-beta-lactamase {Aeromonas hydrophila, C | 97.25 | |
| d1ycga2 | 249 | Nitric oxide reductase N-terminal domain {Moorella | 97.18 | |
| d1e5da2 | 249 | Rubredoxin oxygen:oxidoreductase (ROO), N-terminal | 97.15 | |
| d1jjta_ | 220 | Zn metallo-beta-lactamase {Pseudomonas aeruginosa, | 96.94 | |
| d1ko3a_ | 230 | Zn metallo-beta-lactamase {Pseudomonas aeruginosa, | 96.91 | |
| d1m2xa_ | 219 | Zn metallo-beta-lactamase {Chryseobacterium mening | 96.69 | |
| d1mqoa_ | 221 | Zn metallo-beta-lactamase {Bacillus cereus [TaxId: | 96.63 | |
| d2cfua2 | 505 | Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI | 96.51 | |
| d1znba_ | 230 | Zn metallo-beta-lactamase {Bacteroides fragilis [T | 96.4 | |
| d1vjna_ | 209 | Hypothetical protein TM0207 {Thermotoga maritima [ | 95.54 | |
| d2p97a1 | 200 | Hypothetical protein Ava3068 {Anabaena variabilis | 95.29 | |
| d2p97a1 | 200 | Hypothetical protein Ava3068 {Anabaena variabilis | 91.43 |
| >d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: RNase Z-like domain: Ribonuclease Z (RNase Z) species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=1.1e-41 Score=368.58 Aligned_cols=255 Identities=31% Similarity=0.502 Sum_probs=194.2
Q ss_pred cEEEEEecCCCCCCCCCCccEEEEEEe--CCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHH
Q 002976 492 LEIVLLGTGSSQPSKYRNVSSIYVNLF--SKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLAR 569 (861)
Q Consensus 492 ~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~--~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ 569 (861)
|||+||||||+.|+++||+||++|++. ++..||||||+|++.||.+ .+. .+.+|++|||||.|+||+.||+.
T Consensus 1 Mki~~LGtg~~~p~~~r~~s~~~v~~~~~~~~~iLiD~G~g~~~~l~~-~~~-----~~~~i~~I~iTH~H~DH~~Gl~~ 74 (307)
T d1y44a1 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQMLH-TTI-----KPRKIEKIFITHMHGDHVYGLPG 74 (307)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTHHHHHTT-SSC-----CGGGEEEEECSBCCGGGTTTHHH
T ss_pred CEEEEEeeCCCcCCCCCCcCEEEEEEEccCCCEEEEeCcHHHHHHHHH-cCC-----ChhHCCEEEEcccchHhccchhh
Confidence 799999999999999999999999762 3457999999999999987 554 36899999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccc----eeeecccccccccccccCCCCCcccCCCCCCCCCcc
Q 002976 570 ILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDM----QFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTE 645 (861)
Q Consensus 570 ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 645 (861)
++..++. .+ +.+++.||+|++..++++.+........ .+....
T Consensus 75 ll~~~~~--~~-~~~~l~i~gP~~~~~~l~~~~~~~~~~~~~~~~~~~i~------------------------------ 121 (307)
T d1y44a1 75 LLGSRSF--QG-GEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIE------------------------------ 121 (307)
T ss_dssp HHHHHHH--TT-CCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECC------------------------------
T ss_pred hhhhhcc--cC-CCCcccccCCcchhHHHHHHhhhcccccCcceeEEEcc------------------------------
Confidence 9887643 23 4579999999999999987755332111 000000
Q ss_pred ccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccc------
Q 002976 646 GLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERI------ 719 (861)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~------ 719 (861)
++..+ .....+++++++.|...++||.++.....
T Consensus 122 -----------------------~~~~~-----------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (307)
T d1y44a1 122 -----------------------EGIVF-----------------EDDQFIVTAVSVIHGVEAFGYRVQEKDVPGSLKAD 161 (307)
T ss_dssp -----------------------SEEEE-----------------ECSSEEEEEEECBSSSSBEEEEEEECCBCCCC---
T ss_pred -----------------------CCceE-----------------eccCceEEEeeeccccccccccccccccccchhhh
Confidence 00000 01223455555555555555555431100
Q ss_pred ---------------------------------cccCcccCCcEEEEeCCCCCChhHHhhcCCCcEEEEeccCCCChHHH
Q 002976 720 ---------------------------------NSVGKVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEE 766 (861)
Q Consensus 720 ---------------------------------~~~~~~~~G~ki~YsGDT~p~~~l~~~~~~aDlLIhEaTf~d~~~~~ 766 (861)
...+...+|++++|+|||++++.+++++++||+|||||||.++..+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~g~~~~~sgDt~~~~~l~~~~~~~DlLi~E~~~~~~~~~~ 241 (307)
T d1y44a1 162 VLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSDKLKELARDCDVMVHEATFAKEDRKL 241 (307)
T ss_dssp -----------------------------------CCCCBCCCEEEECCSCBCCHHHHHHTTTCSEEEEECCBCTTCHHH
T ss_pred hhhhcCCCCcchhhhcccccEEEEeeeEEeecceeeecccccccccccccccchHHHHHhhcCCceEEEeccccchhhhh
Confidence 00111236889999999999999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHcCCCEEEEeeccCCCCCCcc--c-cc--ccCCceEEeeeCcEEecC
Q 002976 767 AIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIPV--V-DE--THMHKTCIAFDLMSINLA 825 (861)
Q Consensus 767 a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~~~~~--~-~~--~~~~~v~~A~D~m~i~l~ 825 (861)
|..++|+|++||+++++++++|++||||||+||..... + ++ ...+++++|+|||+|+|+
T Consensus 242 a~~~~H~t~~~a~~~a~~~~~k~lvltH~s~r~~~~~~~~~~~e~~~~~~~~~~a~Dg~~i~i~ 305 (307)
T d1y44a1 242 AYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVFPNSVAAYDFLEVNVP 305 (307)
T ss_dssp HHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHCSSEEECCTTCEEECC
T ss_pred cccCCCCCHHHHHHHHHHcCCCEEEEECcCcccCCchHHHHHHHHHHHCCCcEEccCCCEEecC
Confidence 99999999999999999999999999999999987632 2 22 235689999999999985
|
| >d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
|---|
| >d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
|---|
| >d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} | Back information, alignment and structure |
|---|
| >d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} | Back information, alignment and structure |
|---|
| >d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} | Back information, alignment and structure |
|---|
| >d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
| >d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} | Back information, alignment and structure |
|---|
| >d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
| >d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} | Back information, alignment and structure |
|---|
| >d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} | Back information, alignment and structure |
|---|
| >d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
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| >d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} | Back information, alignment and structure |
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| >d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} | Back information, alignment and structure |
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| >d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
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| >d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} | Back information, alignment and structure |
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| >d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} | Back information, alignment and structure |
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| >d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} | Back information, alignment and structure |
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| >d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} | Back information, alignment and structure |
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| >d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} | Back information, alignment and structure |
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| >d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} | Back information, alignment and structure |
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| >d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
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| >d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} | Back information, alignment and structure |
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| >d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} | Back information, alignment and structure |
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| >d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} | Back information, alignment and structure |
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| >d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
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| >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} | Back information, alignment and structure |
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| >d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
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| >d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
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