Citrus Sinensis ID: 003089
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 849 | ||||||
| 356512055 | 846 | PREDICTED: potassium transporter 7-like | 0.957 | 0.960 | 0.779 | 0.0 | |
| 356524834 | 847 | PREDICTED: potassium transporter 7-like | 0.964 | 0.966 | 0.773 | 0.0 | |
| 356525878 | 842 | PREDICTED: potassium transporter 7-like | 0.977 | 0.985 | 0.766 | 0.0 | |
| 225448277 | 840 | PREDICTED: potassium transporter 7 [Viti | 0.977 | 0.988 | 0.797 | 0.0 | |
| 255581359 | 860 | Potassium transporter, putative [Ricinus | 0.969 | 0.956 | 0.806 | 0.0 | |
| 356558670 | 841 | PREDICTED: potassium transporter 7-like | 0.971 | 0.980 | 0.767 | 0.0 | |
| 224070668 | 839 | predicted protein [Populus trichocarpa] | 0.965 | 0.977 | 0.783 | 0.0 | |
| 449438781 | 851 | PREDICTED: potassium transporter 7-like | 0.968 | 0.965 | 0.772 | 0.0 | |
| 449476454 | 851 | PREDICTED: LOW QUALITY PROTEIN: potassiu | 0.968 | 0.965 | 0.772 | 0.0 | |
| 357490751 | 886 | Potassium transporter [Medicago truncatu | 0.971 | 0.931 | 0.734 | 0.0 |
| >gi|356512055|ref|XP_003524736.1| PREDICTED: potassium transporter 7-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1295 bits (3350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/844 (77%), Positives = 713/844 (84%), Gaps = 31/844 (3%)
Query: 21 DSTESRWVFQNDDESEIDEDEDEVEDGDSG---HRTGGDSEDEDNGEQRLIRTGPRIDSF 77
DSTESRWVFQ D ED E+ED D+ H++ DS+DEDN EQRL+RTGPRIDSF
Sbjct: 19 DSTESRWVFQED------EDPSEIEDFDAADLRHQSMFDSDDEDNAEQRLVRTGPRIDSF 72
Query: 78 DVEALEVPGALRNDYEEFSVGRKIILAFQTLGVVFGDVGTSPLYTFDVMFSKAPINDNED 137
DVEALEVPGA RNDYE+ SVG+ I+LAFQTLGVVFGDVGTSPLYTF VMF KAPI NED
Sbjct: 73 DVEALEVPGAHRNDYEDVSVGKGILLAFQTLGVVFGDVGTSPLYTFSVMFRKAPIKGNED 132
Query: 138 ILGALSLVLYTLILIPLVKYVFVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDAR 197
ILGALSLVLYTLILIPLVKYV VVLWANDDGEGGTFALYSLICR+AKVSLLPNQL SDAR
Sbjct: 133 ILGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLRSDAR 192
Query: 198 ISSFRLKVPSPELERSLKIKERLETSLTLKRLLLMLVLAGTSMVIADGVVTPAMSVMSAV 257
ISSFRLKVPSPELERSLKIKERLETS+TLK++LL+ VLAG SMV+A+GVVTPAMSV+S++
Sbjct: 193 ISSFRLKVPSPELERSLKIKERLETSVTLKKILLLFVLAGISMVMANGVVTPAMSVLSSL 252
Query: 258 GGLKVGVGAINQDQVVMISVAFLVILFSVQKFGTSKVGMAVGPAYLYGFALLLALEFTTL 317
GLKVGV AI QD+VVMISVA LVILFSVQK+GTSKVG+AVGPA F L + L
Sbjct: 253 NGLKVGVDAIKQDEVVMISVACLVILFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIFNL 312
Query: 318 -----SNMTAVSGGHLIPFTYTTSSRGTQLRPGMPLGAVFFVQQVLRQCLQIFVIFQCGR 372
S + A + H+ F S++ G L A C
Sbjct: 313 VKYDSSVLRAFNPIHIYYFFARNSTKAWYSLGGCLLCATGSEAMFADLCY---------- 362
Query: 373 FS-GCLQLTFVFLVLPCLLLGYLGQAAYLMDNHAGAEQSFFSSIPSGAFWPVLLIANIAA 431
FS +QLTFVFLVLPCLLLGYLGQAAYLM+NHA A +F+SS+PSGAFWP LIANIAA
Sbjct: 363 FSVQSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGNAFYSSVPSGAFWPTFLIANIAA 422
Query: 432 LIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVVCLVFVCSI 491
LIASRAMTTATFSCIKQS ALGCFPRLKIIHTSRKFMGQIYIPVINWFLL V LV VCSI
Sbjct: 423 LIASRAMTTATFSCIKQSAALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVLVCSI 482
Query: 492 SSNTEMGNAYGIAELGVMMMTTVLVTIVMLLIWQINIVIVLSFVVVFLGIELTFFSSVLW 551
SS E+GNAYGIAELGVMMMTT+LVT+VMLLIWQI+I++VLSF VVFLG+ELTFFSSVLW
Sbjct: 483 SSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIVVLSFAVVFLGLELTFFSSVLW 542
Query: 552 SVGDGSWIILVFAIIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIG 611
SV DGSWIILVFA+IMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIG
Sbjct: 543 SVTDGSWIILVFAVIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIG 602
Query: 612 LLYNELVKGIPAIFGHFLTTLPAIHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIF 671
LLYNELVKGIP IFGHFLTTLPA+HSMIIFV IKYVPVP+VPQSERFLFRRVC +SYHIF
Sbjct: 603 LLYNELVKGIPGIFGHFLTTLPAVHSMIIFVSIKYVPVPMVPQSERFLFRRVCQRSYHIF 662
Query: 672 RCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDIDSEDDLSCSRVL 731
RCIARYGYKDVRKENHQTFEQLL+ESLEKFIRREAQERSLES+GDDD DSED+ S SRVL
Sbjct: 663 RCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESEGDDDTDSEDEYSGSRVL 722
Query: 732 IAPNGSVYSLGAPLLAEYKEKNEPIS--QPSTSEEVKPELPA----DSEQSLERELSFIR 785
IAPNGSVYSLG PLLA++ + PI + STSEE PE P D+EQSLERELSFIR
Sbjct: 723 IAPNGSVYSLGVPLLADFNDTTIPIPNFEASTSEEANPESPKPPVLDAEQSLERELSFIR 782
Query: 786 KAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGM 845
KAKESGVVYLLGHGDIRARKDSWFIKKL+INYFYAFLRKNCR GI NLSVPHS++MQVGM
Sbjct: 783 KAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYAFLRKNCRSGITNLSVPHSHMMQVGM 842
Query: 846 TYMV 849
TYMV
Sbjct: 843 TYMV 846
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356524834|ref|XP_003531033.1| PREDICTED: potassium transporter 7-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356525878|ref|XP_003531548.1| PREDICTED: potassium transporter 7-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|225448277|ref|XP_002274579.1| PREDICTED: potassium transporter 7 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255581359|ref|XP_002531489.1| Potassium transporter, putative [Ricinus communis] gi|223528898|gb|EEF30896.1| Potassium transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356558670|ref|XP_003547626.1| PREDICTED: potassium transporter 7-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224070668|ref|XP_002303189.1| predicted protein [Populus trichocarpa] gi|222840621|gb|EEE78168.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449438781|ref|XP_004137166.1| PREDICTED: potassium transporter 7-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449476454|ref|XP_004154741.1| PREDICTED: LOW QUALITY PROTEIN: potassium transporter 7-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357490751|ref|XP_003615663.1| Potassium transporter [Medicago truncatula] gi|355516998|gb|AES98621.1| Potassium transporter [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 849 | ||||||
| TAIR|locus:2184722 | 858 | KUP7 "K+ uptake permease 7" [A | 0.528 | 0.523 | 0.679 | 5.2e-263 | |
| TAIR|locus:2134153 | 855 | KUP5 "K+ uptake permease 5" [A | 0.527 | 0.523 | 0.635 | 1.1e-244 | |
| TAIR|locus:2195688 | 827 | AT1G60160 [Arabidopsis thalian | 0.505 | 0.518 | 0.525 | 9.9e-183 | |
| TAIR|locus:2029589 | 796 | KUP10 "K+ uptake permease 10" | 0.515 | 0.550 | 0.361 | 2e-130 | |
| TAIR|locus:2044717 | 793 | KUP11 "K+ uptake permease 11" | 0.508 | 0.544 | 0.354 | 7.1e-126 | |
| TAIR|locus:2078688 | 789 | KUP3 "AT3G02050" [Arabidopsis | 0.359 | 0.386 | 0.405 | 1.5e-122 | |
| TAIR|locus:2119812 | 823 | KUP9 "AT4G19960" [Arabidopsis | 0.519 | 0.535 | 0.341 | 2.8e-122 | |
| TAIR|locus:2045639 | 712 | KT1 "potassium transporter 1" | 0.355 | 0.424 | 0.396 | 4.5e-121 | |
| TAIR|locus:2142110 | 785 | HAK5 "high affinity K+ transpo | 0.500 | 0.541 | 0.315 | 2.3e-116 | |
| TAIR|locus:2061838 | 794 | KT2 "potassium transporter 2" | 0.360 | 0.385 | 0.364 | 8e-113 |
| TAIR|locus:2184722 KUP7 "K+ uptake permease 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1572 (558.4 bits), Expect = 5.2e-263, Sum P(2) = 5.2e-263
Identities = 311/458 (67%), Positives = 337/458 (73%)
Query: 401 MDNHAGAEQSFFSSIPSGAFWPVXXXXXXXXXXXSRAMTTATFSCIKQSTALGCFPRLKI 460
M+NHA A Q+FFSS+P AFWPV SR MTTATFSCIKQSTALGCFPRLKI
Sbjct: 401 MENHADASQAFFSSVPGSAFWPVLFIANIAALIASRTMTTATFSCIKQSTALGCFPRLKI 460
Query: 461 IHTSRKFMGQIYIPVINWXXXXXXXXXXXSISSNTEMGNAYGIAELGXXXXXXXXXXXXX 520
IHTSRKFMGQIYIPV+NW SISS E+GNAYG+AELG
Sbjct: 461 IHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSIDEIGNAYGMAELGVMMTTTILVTLIM 520
Query: 521 XXXWQINXXXXXXXXXXXXGIELTFFSSVLWSVGDGSWXXXXXXXXXXXXXXXWNYGSKL 580
WQIN G+EL FFSSV+ SVGDGSW WNYGSKL
Sbjct: 521 LLIWQINIVIVIAFLVVFLGVELVFFSSVIASVGDGSWIILVFAVIMFGIMYIWNYGSKL 580
Query: 581 KYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMII 640
+YETEV+QKLSMDLMRELGCNLGTIRAPGIGLLYNELVKG+PAIFGHFLTTLPAIHSM+I
Sbjct: 581 RYETEVEQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGVPAIFGHFLTTLPAIHSMVI 640
Query: 641 FVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEK 700
FVCIKYVPVPVVPQ+ERFLFRRVC KSYH+FRCIARYGYKD RKE HQ FEQLLIESLEK
Sbjct: 641 FVCIKYVPVPVVPQNERFLFRRVCTKSYHLFRCIARYGYKDARKETHQAFEQLLIESLEK 700
Query: 701 FIRREAQERXXXXXXXXXXXXXXXXXXXRVLIAPNGSVYSLGAPLLAEYKEKNEPISQPS 760
FIRREAQER RV+I PNGS+YS+G PLL+EY++ N+PI + +
Sbjct: 701 FIRREAQERSLESDGNDDSDSEEDFPGSRVVIGPNGSMYSMGVPLLSEYRDLNKPIMEMN 760
Query: 761 TSEEVKPELPADS---------EQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIK 811
TS + P D+ EQSLERELSFI KAKESGVVYLLGHGDIRARKDSWFIK
Sbjct: 761 TSSDHTNHHPFDTSSDSSVSEAEQSLERELSFIHKAKESGVVYLLGHGDIRARKDSWFIK 820
Query: 812 KLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGMTYMV 849
KLVINYFY FLRKNCRRGIANLSVP S+LMQVGMTYMV
Sbjct: 821 KLVINYFYTFLRKNCRRGIANLSVPQSHLMQVGMTYMV 858
|
|
| TAIR|locus:2134153 KUP5 "K+ uptake permease 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2142110 HAK5 "high affinity K+ transporter 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00000271001 | SubName- Full=Chromosome chr12 scaffold_103, whole genome shotgun sequence; (840 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 849 | |||
| PLN00151 | 852 | PLN00151, PLN00151, potassium transporter; Provisi | 0.0 | |
| PLN00150 | 779 | PLN00150, PLN00150, potassium ion transporter fami | 0.0 | |
| PLN00148 | 785 | PLN00148, PLN00148, potassium transporter; Provisi | 0.0 | |
| PLN00149 | 779 | PLN00149, PLN00149, potassium transporter; Provisi | 0.0 | |
| TIGR00794 | 688 | TIGR00794, kup, potassium uptake protein | 0.0 | |
| pfam02705 | 534 | pfam02705, K_trans, K+ potassium transporter | 1e-173 | |
| COG3158 | 627 | COG3158, Kup, K+ transporter [Inorganic ion transp | 1e-114 | |
| PRK10745 | 622 | PRK10745, trkD, potassium transport protein Kup; P | 2e-72 | |
| COG1459 | 397 | COG1459, PulF, Type II secretory pathway, componen | 0.001 |
| >gnl|CDD|215079 PLN00151, PLN00151, potassium transporter; Provisional | Back alignment and domain information |
|---|
Score = 1478 bits (3828), Expect = 0.0
Identities = 623/871 (71%), Positives = 694/871 (79%), Gaps = 41/871 (4%)
Query: 1 MAEETSGGLEATNGV--GLSSMDSTESRWVFQNDDESEIDEDEDEVEDGDSGHRTGGDSE 58
M EE+SGG+ +++ GL DS ESRWV ++D+SE D+ +D + E
Sbjct: 1 MEEESSGGIGSSSNGSGGLVGTDSGESRWVDGSEDDSEDPASLDDDDDDRDSGGGMLEEE 60
Query: 59 DEDNGEQRLIRTGPRIDSFDVEALEVPGALRNDYEEFSVGRKIILAFQTLGVVFGDVGTS 118
++ N +RLIRT PR+DSFDVEA+E+PGA R+D E+ SVGR + LAFQTLGVVFGDVGTS
Sbjct: 61 EDGNMRRRLIRTPPRVDSFDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTS 120
Query: 119 PLYTFDVMFSKAPINDNEDILGALSLVLYTLILIPLVKYVFVVLWANDDGEGGTFALYSL 178
PLYTF VMFSK PI ED+LGALSLVLYTLILIPL KYV VVLWANDDGEGGTFALYSL
Sbjct: 121 PLYTFSVMFSKVPIKSEEDVLGALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSL 180
Query: 179 ICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKRLLLMLVLAGT 238
ICRHAKVSLLPNQLPSD RISSFRLK+P+PELERSLKIKERLETS LK+LLL+LVLAGT
Sbjct: 181 ICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGT 240
Query: 239 SMVIADGVVTPAMSVMSAVGGLKVGVGAINQDQVVMISVAFLVILFSVQKFGTSKVGMAV 298
SMVI DGV+TPAMSVMSAV GLKVGV QD VVMISVAFLVILFSVQ+FGTSKVG A
Sbjct: 241 SMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAF 300
Query: 299 GPAYLYGFALLLALEFTTLSNMTAVSGGHLIPFTYTTSSRGTQLRPGMPLGAVFFVQQ-- 356
GPA F L + L Y +S R P+ +F ++
Sbjct: 301 GPALALWFCSLGGIGIYNLV-------------KYDSSV----FRAFNPVYIYYFFKRNS 343
Query: 357 -----VLRQCL-------QIFVIFQCGRFS-GCLQLTFVFLVLPCLLLGYLGQAAYLMDN 403
L C+ +F G FS +QL F LVLPCLLL Y+GQAAYLM N
Sbjct: 344 TKAWSALGGCVLCATGSEAMFA--DLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKN 401
Query: 404 HAGAEQSFFSSIPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHT 463
AEQ FFSS+PS FWPV LIAN+AALIASRAMTTATFSCIKQS ALGCFPRLKIIHT
Sbjct: 402 PDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHT 461
Query: 464 SRKFMGQIYIPVINWFLLVVCLVFVCSISSNTEMGNAYGIAELGVMMMTTVLVTIVMLLI 523
SRKFMGQIYIPVINWFLLV+CLV VCS S T++GNAYGIAE+GVMM++T+LVT+VMLLI
Sbjct: 462 SRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLI 521
Query: 524 WQINIVIVLSFVVVFLGIELTFFSSVLWSVGDGSWIILVFAIIMFFIMFVWNYGSKLKYE 583
WQ NI +VL F VVFL +EL FFSSVL SVGDG WI LVFA + IM++WNYGSKLKY+
Sbjct: 522 WQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQ 581
Query: 584 TEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVC 643
+EV+QKLSMDLMRELG NLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHS IIFVC
Sbjct: 582 SEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVC 641
Query: 644 IKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIR 703
IKYVPVPVVPQ ERFLFRRVCPK YH+FRCIARYGYKDVRKENHQ FEQLLIESLEKFIR
Sbjct: 642 IKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIR 701
Query: 704 REAQERSLESDGDDDIDSEDDLSCSRVLIAPNGSVYSLGAPLLAEYKEKNEPISQPSTSE 763
REAQER+LESDG+DD D ED ++ SRVLIAPNGSVYSLG PLLA+Y+ ++PI + STSE
Sbjct: 702 REAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSE 761
Query: 764 EVKPELPADS-----EQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYF 818
EV P LP+ S +QSLE ELSFIR+AKESGVVYLLGHGD+RARK+SWFIKKLVINYF
Sbjct: 762 EVSPVLPSSSMSSDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYF 821
Query: 819 YAFLRKNCRRGIANLSVPHSNLMQVGMTYMV 849
YAFLRKNCRRGIANLSVPHSN+MQVGMTYMV
Sbjct: 822 YAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852
|
Length = 852 |
| >gnl|CDD|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215077 PLN00148, PLN00148, potassium transporter; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|177753 PLN00149, PLN00149, potassium transporter; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|129876 TIGR00794, kup, potassium uptake protein | Back alignment and domain information |
|---|
| >gnl|CDD|217193 pfam02705, K_trans, K+ potassium transporter | Back alignment and domain information |
|---|
| >gnl|CDD|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|182693 PRK10745, trkD, potassium transport protein Kup; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224376 COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 849 | |||
| PLN00151 | 852 | potassium transporter; Provisional | 100.0 | |
| PLN00150 | 779 | potassium ion transporter family protein; Provisio | 100.0 | |
| PLN00148 | 785 | potassium transporter; Provisional | 100.0 | |
| PLN00149 | 779 | potassium transporter; Provisional | 100.0 | |
| TIGR00794 | 688 | kup potassium uptake protein. Proteins of the KUP | 100.0 | |
| PRK10745 | 622 | trkD potassium transport protein Kup; Provisional | 100.0 | |
| PF02705 | 534 | K_trans: K+ potassium transporter; InterPro: IPR00 | 100.0 | |
| COG3158 | 627 | Kup K+ transporter [Inorganic ion transport and me | 100.0 | |
| TIGR00911 | 501 | 2A0308 L-type amino acid transporter. | 89.71 | |
| COG0531 | 466 | PotE Amino acid transporters [Amino acid transport | 88.63 | |
| TIGR00909 | 429 | 2A0306 amino acid transporter. | 86.82 | |
| PRK10655 | 438 | potE putrescine transporter; Provisional | 85.53 |
| >PLN00151 potassium transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-266 Score=2253.80 Aligned_cols=832 Identities=74% Similarity=1.160 Sum_probs=739.8
Q ss_pred CcccccCCccccC--CCCcccCCCCCccccccCCCCcccccccCccCCCCCCCCCCCCCCCcccccccccccCCCCCccc
Q 003089 1 MAEETSGGLEATN--GVGLSSMDSTESRWVFQNDDESEIDEDEDEVEDGDSGHRTGGDSEDEDNGEQRLIRTGPRIDSFD 78 (849)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~d~~~ 78 (849)
|+||.+++..++. .+++.+++|.||||||++|||+|++++.+++.++++......+++++++.++|+||++||+||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 80 (852)
T PLN00151 1 MEEESSGGIGSSSNGSGGLVGTDSGESRWVDGSEDDSEDPASLDDDDDDRDSGGGMLEEEEDGNMRRRLIRTPPRVDSFD 80 (852)
T ss_pred CCCcccCCCCCCCCccCCcccCCCCCcccccCccccccCCcccccccccccccCCccccccccchhhhHhhCCCccchhh
Confidence 5666666555443 34478999999999999888887755444443333321222345566788999999999999999
Q ss_pred ccccccCCcccCccccchHHHHHHHHHhccceeecccCcChHHHHHHhhcCCCCCCcCcEehhHHHHHHHHHHHhhhhee
Q 003089 79 VEALEVPGALRNDYEEFSVGRKIILAFQTLGVVFGDVGTSPLYTFDVMFSKAPINDNEDILGALSLVLYTLILIPLVKYV 158 (849)
Q Consensus 79 ~ea~~~~~~~~~~~~~~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~F~~~~~~~~~dilGvLSLIfWtLtLiv~iKYv 158 (849)
+|+++++++++|+.++.++|+++.|||||||||||||||||||||+++|++.+++++|||+|+||||||||||||++|||
T Consensus 81 ~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIlGvLSLIfWtLtLiv~iKYV 160 (852)
T PLN00151 81 VEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVLGALSLVLYTLILIPLAKYV 160 (852)
T ss_pred hcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhheeeehHHHHHHHHHHHHHhhe
Confidence 99999998887777788888999999999999999999999999999997644578999999999999999999999999
Q ss_pred eEEEEecCCCCchHHHHHHHHhhhcccCCCCCCCCcccccccccccCCCchhhhhHHHHHHHhhhHhHHHHHHHHHHhhh
Q 003089 159 FVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKRLLLMLVLAGT 238 (849)
Q Consensus 159 ~ivL~Add~GEGGtfALysLi~r~ak~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~ 238 (849)
+|||||||||||||||||||+|||+|++++||||++|+++|+|+++.|+++.+|+.++|++||+|+++|++|++++++||
T Consensus 161 ~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~s~~~k~~ll~l~l~Gt 240 (852)
T PLN00151 161 LVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGT 240 (852)
T ss_pred eEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHhhhhHHHHHHHHHHHHHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccchhhhhhccccccccCCCCCCeeehhHHHHHHHHhhhccccccccccchhhHHHHHHHHHHHHHHHHhh
Q 003089 239 SMVIADGVVTPAMSVMSAVGGLKVGVGAINQDQVVMISVAFLVILFSVQKFGTSKVGMAVGPAYLYGFALLLALEFTTLS 318 (849)
Q Consensus 239 sm~igDGvlTPAiSVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIml~WF~~l~~iGiynI~ 318 (849)
||+||||||||||||||||||||++.|++++++||||||+||++||++|||||+|||++|||||++||++|+++|+|||+
T Consensus 241 amviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~ 320 (852)
T PLN00151 241 SMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLV 320 (852)
T ss_pred HHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcCcccccCCCccceecccChhhHHHHHHH-------HhhHHHHHH----HHh--ccCCCCccceehhhHhH
Q 003089 319 NMTAVSGGHLIPFTYTTSSRGTQLRPGMPLGAVFFVQQ-------VLRQCLQIF----VIF--QCGRFSGCLQLTFVFLV 385 (849)
Q Consensus 319 ~~~~~~~~~~~~~~~~p~~~~~Vl~AlnP~ya~~ff~~-------~LGgVvL~i----ALf--lGHF~~~~Iqiaw~~~V 385 (849)
+ |||+ ||+||||+|+++||++ +||||+||+ ||| |||||++|||+||+|+|
T Consensus 321 ~-------------~~p~----Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V 383 (852)
T PLN00151 321 K-------------YDSS----VFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLV 383 (852)
T ss_pred h-------------cCHH----HHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhH
Confidence 9 9999 9999999999999999 999999999 999 99999999999999999
Q ss_pred HHHHHHhhccchhhhccCCCcccCccccccCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCceeEeecCC
Q 003089 386 LPCLLLGYLGQAAYLMDNHAGAEQSFFSSIPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSR 465 (849)
Q Consensus 386 ~P~LlL~Y~GQaA~Ll~~p~~~~npFy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPrvkIvHTS~ 465 (849)
||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+|||++||++||||||+||+|||+
T Consensus 384 ~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~ 463 (852)
T PLN00151 384 LPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSR 463 (852)
T ss_pred HHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEechhHHHHHHHHhheeeecCCchhhHhhhhhHhHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHHH
Q 003089 466 KFMGQIYIPVINWFLLVVCLVFVCSISSNTEMGNAYGIAELGVMMMTTVLVTIVMLLIWQINIVIVLSFVVVFLGIELTF 545 (849)
Q Consensus 466 ~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~vW~~~~~~~~~f~~~F~~ie~~f 545 (849)
+++||||||+|||+||++|+++|++||||++|||||||||++||++||+|+++||+++||||++++++|+++|+++|++|
T Consensus 464 ~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f 543 (852)
T PLN00151 464 KFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVF 543 (852)
T ss_pred ccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHhccCCCCccccceEEEEecCCCCcchhH
Q 003089 546 FSSVLWSVGDGSWIILVFAIIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIF 625 (849)
Q Consensus 546 ~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~l~~~~~~~RvpG~glf~t~~~~gvP~~f 625 (849)
||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.+++||||+|+|||++++|+|++|
T Consensus 544 ~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f 623 (852)
T PLN00151 544 FSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIF 623 (852)
T ss_pred HHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCccceeEEEEEEEEeccccccCCCcEEEEEecCCCCcEEEEEEEeeeccccccChhhHHHHHHHHHHHHHHHh
Q 003089 626 GHFLTTLPAIHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRRE 705 (849)
Q Consensus 626 ~h~l~~~~alH~~~Vfv~ik~~~vP~V~~~eR~~v~r~~~~~~~~yR~v~RyGy~d~~~~~~~~Fe~~Li~~L~~FI~~E 705 (849)
.||++|||++||++||||||++|+|+||++|||+++|++||+|++|||++||||||.++++++|||++|+++|++|||+|
T Consensus 624 ~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e 703 (852)
T PLN00151 624 GHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRRE 703 (852)
T ss_pred HHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999987448999999999999999999
Q ss_pred hhhccccCCCCCCCCCCCccccccccccCCCccccCCCcccccccccCCCCCCCCCCCc---c-CCC-CCCcchhhHHHH
Q 003089 706 AQERSLESDGDDDIDSEDDLSCSRVLIAPNGSVYSLGAPLLAEYKEKNEPISQPSTSEE---V-KPE-LPADSEQSLERE 780 (849)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~l~~~~~~~~~~~~~~~~~~~---~-~~~-~s~~~~~~veeE 780 (849)
+.+...+++.+++..++.+...+.....++.+..+...+.+++....+........+.+ . ..+ ...+.++++++|
T Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 783 (852)
T PLN00151 704 AQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSLEYE 783 (852)
T ss_pred hhhccccccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccccccccccccCccHHHH
Confidence 86432222111100000000000000011111111111111111111000000000000 0 000 112335689999
Q ss_pred HHHHHHHHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeEeeeEEEC
Q 003089 781 LSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGMTYMV 849 (849)
Q Consensus 781 l~~L~~A~eaGVvYILG~~~VkAr~~SsflKKivIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~v 849 (849)
+++|++|+|+||+||+||++||||++|+|+||++|||+|+|||||||++.++|+|||++||||||+|||
T Consensus 784 l~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 784 LSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997
|
|
| >PLN00150 potassium ion transporter family protein; Provisional | Back alignment and domain information |
|---|
| >PLN00148 potassium transporter; Provisional | Back alignment and domain information |
|---|
| >PLN00149 potassium transporter; Provisional | Back alignment and domain information |
|---|
| >TIGR00794 kup potassium uptake protein | Back alignment and domain information |
|---|
| >PRK10745 trkD potassium transport protein Kup; Provisional | Back alignment and domain information |
|---|
| >PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members | Back alignment and domain information |
|---|
| >COG3158 Kup K+ transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00911 2A0308 L-type amino acid transporter | Back alignment and domain information |
|---|
| >COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00909 2A0306 amino acid transporter | Back alignment and domain information |
|---|
| >PRK10655 potE putrescine transporter; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 849 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 6e-05
Identities = 78/515 (15%), Positives = 145/515 (28%), Gaps = 196/515 (38%)
Query: 341 QLRP-------GMP-LGAVFFVQQVLR----QCLQIFVIF-----QCGRFSGCLQLTFVF 383
+LRP G+ G + V QC F IF C
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS----------- 194
Query: 384 LVLPCLLLGYLGQAAYLMDNHAGAEQSFFSSIPSGAFWPVLLIANIAALIASRAMTTA-- 441
P +L L + Y +D + + S+I + A + L+ S+
Sbjct: 195 ---PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS---IQAELRRLLKSKPYENCLL 248
Query: 442 ------------TFSCIKQSTALGCFPRLKIIHTSR--------KFMGQIYIPVINWF-- 479
F+ L C KI+ T+R +I + +
Sbjct: 249 VLLNVQNAKAWNAFN-------LSC----KILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 480 --------LLVVCLVFVCSISSNT---EM--GNAYGIAELGVMM--MTTVLVTIVMLLIW 524
LL+ L E+ N ++ + + +
Sbjct: 298 LTPDEVKSLLLKYL----DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 525 QINIVIVLSFVV--------VFLGIELTFFSSVLWSVGDGSWI-ILVFAIIMFFIMFVWN 575
++ +I S V +F L+ F + I ++ ++I W
Sbjct: 354 KLTTIIESSLNVLEPAEYRKMFD--RLSVFP-------PSAHIPTILLSLI-------WF 397
Query: 576 YGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLL---YNELVKGIPAIFGHFLTTL 632
+++V M ++ +L L+ E IP+I+ L
Sbjct: 398 DVI----KSDV-----MVVVNKL-HKYS--------LVEKQPKESTISIPSIYLELKVKL 439
Query: 633 ---PAIHSMII--------FVCIKYVPVPV--------------VPQSERF-LFRRVCPK 666
A+H I+ F +P + + ER LFR V
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV--- 496
Query: 667 SYHIFR------------CIARYG----------YKDVRKENHQTFEQLLIESLEKFIRR 704
+ FR A YK +N +E+ L+ ++ F+ +
Sbjct: 497 -FLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYER-LVNAILDFLPK 554
Query: 705 EAQERSLESDGDDDIDSEDDLSCSRVLIAPNGSVY 739
+E + S D + L+A + +++
Sbjct: 555 -IEENLICSKYTDLL--------RIALMAEDEAIF 580
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 849 | |||
| 3gia_A | 444 | Uncharacterized protein MJ0609; membrane protein, | 95.32 | |
| 4djk_A | 511 | Probable glutamate/gamma-aminobutyrate antiporter; | 93.04 | |
| 3l1l_A | 445 | Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC | 92.95 |
| >3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C | Back alignment and structure |
|---|
Probab=95.32 E-value=0.1 Score=56.14 Aligned_cols=44 Identities=16% Similarity=0.318 Sum_probs=27.2
Q ss_pred eehhHHHHHHHHhhhccccccccccc---hhhHHHHHHHHHHHHHHH
Q 003089 272 VVMISVAFLVILFSVQKFGTSKVGMA---VGPAYLYGFALLLALEFT 315 (849)
Q Consensus 272 Vv~is~~ILv~LF~iQ~~GT~kVg~~---FgPIml~WF~~l~~iGiy 315 (849)
...+++++++++..+.-+|....+.+ +..+.++=++.+.+.|+.
T Consensus 125 ~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~ii~~~~ 171 (444)
T 3gia_A 125 IAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLI 171 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577888888888888998766654 444444434444444443
|
| >4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A | Back alignment and structure |
|---|
| >3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00