Citrus Sinensis ID: 003495
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 815 | 2.2.26 [Sep-21-2011] | |||||||
| O23826 | 1006 | 125 kDa kinesin-related p | N/A | no | 0.980 | 0.794 | 0.646 | 0.0 | |
| P82266 | 1009 | Probable 125 kDa kinesin- | yes | no | 0.981 | 0.792 | 0.625 | 0.0 | |
| Q6P9P6 | 1052 | Kinesin-like protein KIF1 | yes | no | 0.304 | 0.235 | 0.577 | 1e-84 | |
| Q91783 | 1067 | Kinesin-like protein KIF1 | N/A | no | 0.350 | 0.268 | 0.522 | 2e-84 | |
| P28025 | 1067 | Kinesin-like protein KIF1 | N/A | no | 0.431 | 0.329 | 0.460 | 3e-84 | |
| B2GU58 | 1067 | Kinesin-like protein KIF1 | yes | no | 0.366 | 0.280 | 0.502 | 5e-84 | |
| P52732 | 1056 | Kinesin-like protein KIF1 | yes | no | 0.304 | 0.234 | 0.573 | 1e-83 | |
| P46863 | 1066 | Bipolar kinesin KRP-130 O | yes | no | 0.349 | 0.267 | 0.484 | 9e-78 | |
| P17120 | 1184 | Kinesin-like protein bimC | yes | no | 0.321 | 0.221 | 0.520 | 2e-73 | |
| Q8J1G4 | 1129 | Kinesin-like protein KIP1 | yes | no | 0.434 | 0.313 | 0.421 | 1e-71 |
| >sp|O23826|K125_TOBAC 125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1136 bits (2938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/898 (64%), Positives = 671/898 (74%), Gaps = 99/898 (11%)
Query: 16 CSMRQSGPNGELPPEAGVIPRAVQQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPDEI 75
C +SGPNGELP EAGVIPRAV+Q+FDTLESQNAEYSVKVTFLELYNEEITDLLAP+++
Sbjct: 109 CKRSKSGPNGELPQEAGVIPRAVKQVFDTLESQNAEYSVKVTFLELYNEEITDLLAPEDL 168
Query: 76 SRAAVEDKQKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQ 135
+ A+ED+QKKQLPLMEDGKGGVLVRGLEEEIVTSA+EIFTLLERGSAKRRTAETLLNKQ
Sbjct: 169 -KVALEDRQKKQLPLMEDGKGGVLVRGLEEEIVTSANEIFTLLERGSAKRRTAETLLNKQ 227
Query: 136 SSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKS 195
SSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKS
Sbjct: 228 SSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKS 287
Query: 196 LLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLD 255
LLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLD
Sbjct: 288 LLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLD 347
Query: 256 YAHRAKNIKNKPEV------------------------YAAREKNGVYIPKERYYQEESE 291
YAHRAKNIKNKPEV YAAREKNGVYIPKERYYQEE+E
Sbjct: 348 YAHRAKNIKNKPEVNQKMMKSTLIKDLYGEIERLKAEVYAAREKNGVYIPKERYYQEENE 407
Query: 292 RKS---------------------------------------------NLDQTIKLLNNT 306
RK+ L+QT KLL T
Sbjct: 408 RKAMADQIEQMGVSIENHQKQFEELQSRHDSQVQQCSDLTCKLDVTQKQLNQTSKLLAYT 467
Query: 307 EEQLKKCQYALKEKDFIISEQKKA-----------------------------GREDKLN 337
EEQL++ QY LKE+DFIISEQKKA REDKL+
Sbjct: 468 EEQLRQSQYTLKERDFIISEQKKAENALAHQACVLRADLEKSIQENASLFQKIAREDKLS 527
Query: 338 ADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKKK 397
DNRS+V NFQ ELA+Q+GSL + S C+Q EHL+ VEK CH+ L H+KAV+DLK+K
Sbjct: 528 TDNRSLVNNFQAELAKQLGSLSSTLATSVCRQTEHLQCVEKFCHNFLDSHDKAVLDLKRK 587
Query: 398 VTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYE 457
+ +S ALY SH EA+QNVVRLHKA SNA LEE+S ASSNS S KEFL +EA EA S+++
Sbjct: 588 INSSMALYISHFEAMQNVVRLHKATSNATLEEVSTLASSNSISTKEFLDAEAVEANSMFD 647
Query: 458 NLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQAD 517
LQ+TLST QGEMA FARE+RQRF + E +I+ F KLL+ESK LE +A D
Sbjct: 648 ELQSTLSTHQGEMAHFARELRQRFNDSTEHLTNISAIIQRFFDKLLDESKRLEKHATTVD 707
Query: 518 ENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKL 577
E Q SIA+F+KAYE+Q+KSD EKLIADVTSLVS+HMRRQ ELV ARLVD RE ++
Sbjct: 708 EIQTNSIAEFEKAYEEQSKSDAEKLIADVTSLVSNHMRRQKELVGARLVDLRETVSGNRT 767
Query: 578 FLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESAF 637
FLDGH SS+EGITTDAKRKWQ F MQA+ + K+ AD S+AKHCRME L+Q+CV++ E+A
Sbjct: 768 FLDGHVSSMEGITTDAKRKWQDFYMQAEGETKENADFSAAKHCRMESLMQKCVSTAETAL 827
Query: 638 GHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQL 697
W+ T+E VN+M ++HV +M S+ RN +NEQH + D+ R + EE+V ++SED ++
Sbjct: 828 KRWQSTHELVNDMGNQHVLTMHSVVRNICDNNEQHVTDFDSTRESAEEDVKRNSEDIIKS 887
Query: 698 IASASEQEQASIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGT 757
I S S +E+ SI+ VLD AH +T+++ ++ H QS SI++ A ETFQQ+YMDYE TG
Sbjct: 888 IDSLSGEERGSISGVLDTTSAHSETLDVLKKDHCMQSTSIEQIALETFQQKYMDYEPTGA 947
Query: 758 TPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 815
TP R E +VPSK TIESLRAMPME LLEEFRENNS+ESF VKE+KPSLIPRSP SQIN
Sbjct: 948 TPIRSEPDVPSKVTIESLRAMPMEVLLEEFRENNSFESFQVKEVKPSLIPRSPFSQIN 1005
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Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules. Nicotiana tabacum (taxid: 4097) |
| >sp|P82266|K125_ARATH Probable 125 kDa kinesin-related protein OS=Arabidopsis thaliana GN=At2g36200 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q6P9P6|KIF11_MOUSE Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q91783|KI11A_XENLA Kinesin-like protein KIF11-A OS=Xenopus laevis GN=kif11-a PE=1 SV=1 | Back alignment and function description |
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| >sp|P28025|KI11B_XENLA Kinesin-like protein KIF11-B OS=Xenopus laevis GN=kif11-b PE=1 SV=2 | Back alignment and function description |
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| >sp|B2GU58|KIF11_XENTR Kinesin-like protein KIF11 OS=Xenopus tropicalis GN=kif11 PE=2 SV=1 | Back alignment and function description |
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| >sp|P52732|KIF11_HUMAN Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF11 PE=1 SV=2 | Back alignment and function description |
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| >sp|P46863|KL61_DROME Bipolar kinesin KRP-130 OS=Drosophila melanogaster GN=Klp61F PE=1 SV=2 | Back alignment and function description |
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| >sp|P17120|BIMC_EMENI Kinesin-like protein bimC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimC PE=2 SV=2 | Back alignment and function description |
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| >sp|Q8J1G4|KIP1_ASHGO Kinesin-like protein KIP1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=KIP1 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 815 | ||||||
| 255578965 | 1530 | Bipolar kinesin KRP-130, putative [Ricin | 0.981 | 0.522 | 0.696 | 0.0 | |
| 225440841 | 1009 | PREDICTED: 125 kDa kinesin-related prote | 0.981 | 0.792 | 0.683 | 0.0 | |
| 297740135 | 1006 | unnamed protein product [Vitis vinifera] | 0.976 | 0.791 | 0.685 | 0.0 | |
| 356572582 | 1006 | PREDICTED: 125 kDa kinesin-related prote | 0.981 | 0.795 | 0.661 | 0.0 | |
| 224091967 | 996 | predicted protein [Populus trichocarpa] | 0.981 | 0.803 | 0.671 | 0.0 | |
| 356505390 | 1006 | PREDICTED: 125 kDa kinesin-related prote | 0.981 | 0.795 | 0.653 | 0.0 | |
| 357511135 | 1007 | 125 kDa kinesin-related protein [Medicag | 0.981 | 0.794 | 0.640 | 0.0 | |
| 449462950 | 1009 | PREDICTED: 125 kDa kinesin-related prote | 0.981 | 0.792 | 0.650 | 0.0 | |
| 440583674 | 1075 | similar to 125 kDa kinesin-related prote | 0.981 | 0.744 | 0.630 | 0.0 | |
| 11132775 | 1006 | RecName: Full=125 kDa kinesin-related pr | 0.980 | 0.794 | 0.646 | 0.0 |
| >gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis] gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1233 bits (3189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/899 (69%), Positives = 717/899 (79%), Gaps = 99/899 (11%)
Query: 16 CSMRQSGPNGELPPEAGVIPRAVQQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPDEI 75
C +SGPNGELPPEAGVIPRAV+QIFDTLESQNAEYSVKVTFLELYNEEITDLLAPDEI
Sbjct: 112 CKRAKSGPNGELPPEAGVIPRAVKQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPDEI 171
Query: 76 SRAAVEDKQKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQ 135
S+ +E+KQKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQ
Sbjct: 172 SKVVLEEKQKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQ 231
Query: 136 SSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKS 195
SSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKS
Sbjct: 232 SSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKS 291
Query: 196 LLTLGRVINALVEHLGHIPYR-DSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTL 254
LLTLGRVINALVEHLGHIPY DSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTL
Sbjct: 292 LLTLGRVINALVEHLGHIPYXXDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTL 351
Query: 255 DYAHRAKNIKNKPEV------------------------YAAREKNGVYIPKERYYQEES 290
DYAHRAKNIKNKPEV YAAREKNGVYIPK+RYYQEES
Sbjct: 352 DYAHRAKNIKNKPEVNQKMMKSTLIKDLYGEIERLKSEVYAAREKNGVYIPKDRYYQEES 411
Query: 291 ERKS---------------------------------------------NLDQTIKLLNN 305
ERK+ +L QT KLL N
Sbjct: 412 ERKAMADQIEQMGVTIENHQKQMEELQVRYDAQVQQCSDLSRKLDATEKDLSQTCKLLTN 471
Query: 306 TEEQLKKCQYALKEKDFIISEQKKA-----------------------------GREDKL 336
TE++LKKC+Y LKEKDFIISEQ+KA GREDKL
Sbjct: 472 TEDELKKCRYTLKEKDFIISEQRKAENALAHQACVLRSDLEKALQDNASLFQKIGREDKL 531
Query: 337 NADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHLKHVEKLCHSLLGIHEKAVIDLKK 396
NADNR+VV NFQVEL+QQI L +V S +Q+EH++ VEKLCHS L IH+KAV D+KK
Sbjct: 532 NADNRAVVSNFQVELSQQISCLQGMVASSMVKQDEHIQCVEKLCHSFLDIHDKAVKDMKK 591
Query: 397 KVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIY 456
K+TASRALY SH+EAVQNVVRLHKA S A LEEIS+ SSN++SI+++LASEA +AASI+
Sbjct: 592 KLTASRALYISHVEAVQNVVRLHKASSIAGLEEISSSVSSNAQSIEDYLASEAGQAASIF 651
Query: 457 ENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQA 516
++LQ+TLST QGEMA+FARE+RQ+F V+ ERTK+I++Y NGFLQKLLE+SK L+N+A A
Sbjct: 652 DDLQSTLSTHQGEMALFARELRQKFHVSGERTKEISDYMNGFLQKLLEQSKWLQNHAAHA 711
Query: 517 DENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSK 576
DE Q+KSIADFQKAYE+Q+KSD EKL+AD+++LVSSH+RRQ ELV+ARLVD RE A+ ++
Sbjct: 712 DETQLKSIADFQKAYEEQSKSDAEKLVADISNLVSSHIRRQKELVDARLVDLRETAIGNR 771
Query: 577 LFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLQECVNSGESA 636
LDGH S+E +TTDAKRKWQ F+MQA+NDAKD AD+S+ KHCRMELLLQ+ +++ ESA
Sbjct: 772 GILDGHVYSMEVVTTDAKRKWQEFSMQAENDAKDAADYSAVKHCRMELLLQQSLSTTESA 831
Query: 637 FGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSEDALQ 696
F HWK T+ESVNEM KHVSS+ SLTRNA S EQHDVE+D+ARVATE++VA++SED +Q
Sbjct: 832 FKHWKMTHESVNEMGHKHVSSLSSLTRNACDSIEQHDVEIDSARVATEQDVARNSEDFIQ 891
Query: 697 LIASASEQEQASIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTG 756
I + SEQE+ S++ +L+ VKAH T+ FRE HS Q+ +I++KA +TF Q YMDYE TG
Sbjct: 892 HIDNMSEQERGSVSGILEAVKAHVDTLTSFREDHSGQAVAIEDKAHKTFVQHYMDYEPTG 951
Query: 757 TTPTRCESEVPSKGTIESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 815
+TPTRCE +VPSKGTIESLRAMPME LLEEFRENNSYES +VKELKPSLIPRSPL Q+N
Sbjct: 952 STPTRCEPDVPSKGTIESLRAMPMEALLEEFRENNSYESSEVKELKPSLIPRSPLVQLN 1010
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225440841|ref|XP_002276356.1| PREDICTED: 125 kDa kinesin-related protein-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297740135|emb|CBI30317.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356572582|ref|XP_003554447.1| PREDICTED: 125 kDa kinesin-related protein-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224091967|ref|XP_002309420.1| predicted protein [Populus trichocarpa] gi|222855396|gb|EEE92943.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356505390|ref|XP_003521474.1| PREDICTED: 125 kDa kinesin-related protein-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357511135|ref|XP_003625856.1| 125 kDa kinesin-related protein [Medicago truncatula] gi|87240830|gb|ABD32688.1| Kinesin, motor region [Medicago truncatula] gi|355500871|gb|AES82074.1| 125 kDa kinesin-related protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449462950|ref|XP_004149198.1| PREDICTED: 125 kDa kinesin-related protein-like [Cucumis sativus] gi|449500894|ref|XP_004161223.1| PREDICTED: 125 kDa kinesin-related protein-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|440583674|emb|CCH47180.1| similar to 125 kDa kinesin-related protein-like [Lupinus angustifolius] | Back alignment and taxonomy information |
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| >gi|11132775|sp|O23826.1|K125_TOBAC RecName: Full=125 kDa kinesin-related protein gi|2582971|dbj|BAA23159.1| TKRP125 [Nicotiana tabacum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 815 | ||||||
| TAIR|locus:2077132 | 1058 | AT3G45850 [Arabidopsis thalian | 0.732 | 0.564 | 0.406 | 6.4e-112 | |
| TAIR|locus:2049791 | 1039 | AT2G37420 [Arabidopsis thalian | 0.777 | 0.610 | 0.390 | 2e-97 | |
| UNIPROTKB|E1BF29 | 1055 | KIF11 "Uncharacterized protein | 0.366 | 0.283 | 0.515 | 6.2e-79 | |
| UNIPROTKB|Q91783 | 1067 | kif11-a "Kinesin-like protein | 0.530 | 0.404 | 0.419 | 9.8e-77 | |
| UNIPROTKB|B2GU58 | 1067 | kif11 "Kinesin-like protein KI | 0.666 | 0.508 | 0.372 | 2.1e-74 | |
| UNIPROTKB|F1SC89 | 1059 | KIF11 "Uncharacterized protein | 0.764 | 0.588 | 0.354 | 1.6e-73 | |
| MGI|MGI:1098231 | 1052 | Kif11 "kinesin family member 1 | 0.498 | 0.385 | 0.435 | 5e-72 | |
| UNIPROTKB|F1MAB8 | 1056 | Kif11 "Protein Kif11" [Rattus | 0.500 | 0.386 | 0.437 | 5.7e-72 | |
| UNIPROTKB|P28025 | 1067 | kif11-b "Kinesin-like protein | 0.695 | 0.531 | 0.353 | 9.7e-72 | |
| UNIPROTKB|F1NXA1 | 1067 | KIF11 "Uncharacterized protein | 0.655 | 0.500 | 0.372 | 3.7e-70 |
| TAIR|locus:2077132 AT3G45850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1047 (373.6 bits), Expect = 6.4e-112, Sum P(3) = 6.4e-112
Identities = 255/627 (40%), Positives = 360/627 (57%)
Query: 24 NGELPPEAGVIPRAVQQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPDEISRAAVEDK 83
NGE P +AGVIPRAV+QIFD LE+Q AEYS+KVTFLELYNEEI+DLLAP+E + V++K
Sbjct: 152 NGEFPSDAGVIPRAVKQIFDILEAQGAEYSMKVTFLELYNEEISDLLAPEETIKF-VDEK 210
Query: 84 QKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQSSRSHSLF 143
KK + LMEDGKG V VRGLEEEIV++A+EI+ +LE+GSAKRRTAETLLNKQSSRSHS+F
Sbjct: 211 SKKSIALMEDGKGSVFVRGLEEEIVSTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIF 270
Query: 144 SITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSXXXXXXXXXXXXINKSLLTLGRVI 203
SITIHIKE TPEGEE+IKCGKLNLVDLAGSENISRS INKSLLTLGRVI
Sbjct: 271 SITIHIKENTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVI 330
Query: 204 NALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNI 263
NALVEH GHIPYRDSKLTRLLR+SLGG+TKTC+IAT+SP++HCLEETLSTLDYAHRAKNI
Sbjct: 331 NALVEHSGHIPYRDSKLTRLLRESLGGKTKTCVIATISPSIHCLEETLSTLDYAHRAKNI 390
Query: 264 KNKPEVYAAREKNGVYIPKERYYQEESERKSNLDQTIKLLNNTEEQLKKCQYALKEKDFI 323
KNKPE+ K+ V K+ Y S +D+ + + E K Y K++ +I
Sbjct: 391 KNKPEINQKMMKSAVM--KDLY--------SEIDRLKQEVYAARE--KNGIYIPKDR-YI 437
Query: 324 ISEQKKAGREDKLNA-DNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEHL-KHVEKLCH 381
E +K +K+ + +S ++ +V Q++ + I+ ++ E K +E+ H
Sbjct: 438 QEEAEKKAMAEKIERLELQSESKDKRVVDLQELYNSQQILTAELSEKLEKTEKKLEETEH 497
Query: 382 SLLGIHEK---AVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFAS--- 435
SL + EK A +K+K L S V+ +L +A+ + + F+
Sbjct: 498 SLFDLEEKYRQANATIKEKEFVISNLLKSEKSLVERAFQLRTELESASSDVSNLFSKIER 557
Query: 436 ------SNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTK 489
N I++F + ++ +++ + ++++ Q+ ++ +M E T+
Sbjct: 558 KDKIEDGNRFLIQKFQSQLTQQLELLHKTVASSVTQQEVQLKHMEEDMESFVSTKSEATE 617
Query: 490 DIAEYTNGFLQXXXXXXXXXXNYAVQADENQMKSIADFQKAYEDQTKS--DTEKLIADVT 547
++ + + + N AV+ D N + + + + K A
Sbjct: 618 ELRDRLSKLKRVYGSGIEALDNIAVKLDGNSQSTFSSLNSEVSKHSHELENVFKGFASEA 677
Query: 548 SLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADND 607
++ ++ E +L+ F + + A SV +T + + A +
Sbjct: 678 DMLLQDLQSSLNKQEEKLITFAQQQRKAHSRAVDTARSVSKVTVEFFKTLDTHATKLTGI 737
Query: 608 AKDGADHSSAKHCRMELLLQECVNSGE 634
++ + K E +EC + E
Sbjct: 738 VEEAQTVNHKKLSEFENKFEECAANEE 764
|
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| TAIR|locus:2049791 AT2G37420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BF29 KIF11 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q91783 kif11-a "Kinesin-like protein KIF11-A" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B2GU58 kif11 "Kinesin-like protein KIF11" [Xenopus (Silurana) tropicalis (taxid:8364)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SC89 KIF11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:1098231 Kif11 "kinesin family member 11" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MAB8 Kif11 "Protein Kif11" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P28025 kif11-b "Kinesin-like protein KIF11-B" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NXA1 KIF11 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P82266 | K125_ARATH | No assigned EC number | 0.6258 | 0.9815 | 0.7928 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 815 | |||
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 1e-153 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-104 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 7e-99 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-89 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 7e-78 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 1e-77 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 1e-76 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 6e-76 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 7e-72 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 1e-69 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 6e-68 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 3e-61 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 4e-60 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 5e-58 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 3e-52 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 4e-52 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 3e-51 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 1e-45 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 2e-45 |
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
Score = 451 bits (1162), Expect = e-153
Identities = 173/253 (68%), Positives = 198/253 (78%), Gaps = 10/253 (3%)
Query: 19 RQSGPNGELPPEAGVIPRAVQQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPDEISRA 78
G EL P AG+IPRA+ Q+F+ LESQN EYSVKV++LELYNEE+ DLL+
Sbjct: 105 DNKGSTWELSPHAGIIPRALYQLFEKLESQNTEYSVKVSYLELYNEELFDLLSS------ 158
Query: 79 AVEDKQKKQLPLMED--GKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQS 136
E K L + +D KGGV+++GLEE V +A+E LLE+GSAKR+TA TL+N QS
Sbjct: 159 --ESDLNKPLRIFDDTNNKGGVVIQGLEEITVNNANEGLKLLEKGSAKRKTAATLMNDQS 216
Query: 137 SRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSL 196
SRSHS+FSITIHIKE T GEEL+K GKLNLVDLAGSENI RSGA RAREAG IN+SL
Sbjct: 217 SRSHSIFSITIHIKETTISGEELVKIGKLNLVDLAGSENIGRSGAENKRAREAGNINQSL 276
Query: 197 LTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDY 256
LTLGRVINALVE HIPYR+SKLTRLL+DSLGGRTKT IIAT+SPA LEETLSTL+Y
Sbjct: 277 LTLGRVINALVEKSPHIPYRESKLTRLLQDSLGGRTKTSIIATISPASINLEETLSTLEY 336
Query: 257 AHRAKNIKNKPEV 269
AHRAKNIKNKPEV
Sbjct: 337 AHRAKNIKNKPEV 349
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 352 |
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 815 | |||
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| PF13931 | 143 | Microtub_bind: Kinesin-associated microtubule-bind | 98.64 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 98.57 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 96.95 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 95.62 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 95.28 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 93.95 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 93.36 | |
| PF06705 | 247 | SF-assemblin: SF-assemblin/beta giardin | 93.16 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 92.54 | |
| PF01442 | 202 | Apolipoprotein: Apolipoprotein A1/A4/E domain; Int | 91.91 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 91.83 | |
| PF14643 | 473 | DUF4455: Domain of unknown function (DUF4455) | 91.59 | |
| PF01442 | 202 | Apolipoprotein: Apolipoprotein A1/A4/E domain; Int | 90.03 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 89.89 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 88.83 | |
| PF06705 | 247 | SF-assemblin: SF-assemblin/beta giardin | 88.52 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 88.27 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 87.58 | |
| PF09403 | 126 | FadA: Adhesion protein FadA; InterPro: IPR018543 F | 87.57 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 86.45 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 85.33 | |
| KOG4302 | 660 | consensus Microtubule-associated protein essential | 85.09 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 82.48 | |
| PRK11637 | 428 | AmiB activator; Provisional | 82.13 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 81.58 | |
| PF07464 | 155 | ApoLp-III: Apolipophorin-III precursor (apoLp-III) | 80.8 | |
| PRK11637 | 428 | AmiB activator; Provisional | 80.11 |
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-129 Score=1144.06 Aligned_cols=808 Identities=43% Similarity=0.608 Sum_probs=761.8
Q ss_pred CCCCCCCcceEEEeeccCCCCCCCC-------------CCCCcHHHHHHHHHHHhhhCCCceEEEEeEEEEEcccccccC
Q 003495 4 RHEKEKGVNVQLCSMRQSGPNGELP-------------PEAGVIPRAVQQIFDTLESQNAEYSVKVTFLELYNEEITDLL 70 (815)
Q Consensus 4 l~~~~~GyN~~I~ayGqTGSGkt~t-------------~~~GIIPRal~~LF~~i~~~~~~~sV~vS~lEIYnE~V~DLL 70 (815)
|.+++.||||+||||||||+||||| +++|||||+|.+||+.++.++.+|+|+|||+|+|||+|+|||
T Consensus 121 i~eVl~GyNCTIFAYGQTGTGKTyTMeG~~~~~~g~l~~~aGIIPRal~~IFd~Le~~~~EYsvKVSfLELYNEEl~DLL 200 (1041)
T KOG0243|consen 121 IKEVLEGYNCTIFAYGQTGTGKTYTMEGGERKKNGELPSEAGIIPRALRQIFDTLEAQGAEYSVKVSFLELYNEELTDLL 200 (1041)
T ss_pred HHHHhccCCceEEEecCCCCCceeeeecCcccccCCCCccCCcchHHHHHHHHHHHhcCCeEEEEEEehhhhhHHHHHhc
Confidence 5678999999999999999999996 689999999999999999999999999999999999999999
Q ss_pred CCcchhhhhhhhhccCccceeecCCCCeEecCcEEEEecCHHHHHHHhHhhhhccccccccccCCCCCCeeEEEEEEEEe
Q 003495 71 APDEISRAAVEDKQKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIK 150 (815)
Q Consensus 71 ~~~~~~~~~~~~~~~k~L~i~ed~~~gv~V~gLtev~V~S~~e~~~lL~~G~~~R~~~~T~~N~~SSRSH~IftI~V~~~ 150 (815)
+|........+....+++. |++|||+|+||.+++|+++.|++++|.+|.++|++++|.||++|||||+||+|+|+++
T Consensus 201 a~~~~~~~~~~~k~~~~~~---~~kggV~vkGlEEi~V~~A~ei~klLekGs~kRrtAaTl~N~~SSRSHsIFsItvhik 277 (1041)
T KOG0243|consen 201 ASEDTSDKKLRIKDDSTIV---DGKGGVIVKGLEEIIVTNADEIYKLLEKGSKKRRTAATLMNDQSSRSHSIFSITVHIK 277 (1041)
T ss_pred CCccccccccccccCCccc---CCcCcEEEecceeeeecchhHHHHHHHhhhhHhHHHHHHhhhhccccceEEEEEEEEe
Confidence 9986431111222222222 6799999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcceEEEeEEEEeeCCCCccccccCCcchhhHHHHHhhhhHHHHHHHHHHHHhcCCCCCCcCCchhhhhhccCCC
Q 003495 151 EATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGG 230 (815)
Q Consensus 151 ~~~~~~~~~~~~skL~lVDLAGSEr~~ksga~g~r~kEa~~INkSL~aLg~VI~aL~~~~~hIPYRdSKLTrLLqdsLGG 230 (815)
+.++.|++++++|||+||||||||+++++|+++.|++|||.||+||+||||||+||+++.+|||||+|||||||||||||
T Consensus 278 e~t~~geelvK~GKLNLVDLAGSENI~RSGA~~~RArEAG~INqSLLTLGRVInALVe~s~HIPYRESKLTRLLQDSLGG 357 (1041)
T KOG0243|consen 278 ENTPEGEELVKIGKLNLVDLAGSENISRSGARNGRAREAGEINQSLLTLGRVINALVEHSGHIPYRESKLTRLLQDSLGG 357 (1041)
T ss_pred cCCCcchhhHhhcccceeeccccccccccccccchhHHhhhhhHHHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccceEEecCCCCCChHhHHHHHHHHHHhhccccchh------------------------hhhhhhcCCcccchhhhh
Q 003495 231 RTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIKNKPE------------------------VYAAREKNGVYIPKERYY 286 (815)
Q Consensus 231 nskT~~IatISP~~~~~eETlsTL~fA~rak~Ikn~p~------------------------v~~~r~~~g~~~~~~~~~ 286 (815)
++||||||||||+..+++||++||+||.|||+|+|+|+ ++++|++||+|++.++|.
T Consensus 358 kTKT~iIATiSPa~~~lEETlSTLEYA~RAKnIkNKPevNQkl~K~~llKd~~~EIerLK~dl~AaReKnGvyisee~y~ 437 (1041)
T KOG0243|consen 358 KTKTCIIATISPAKHNLEETLSTLEYAHRAKNIKNKPEVNQKLMKKTLLKDLYEEIERLKRDLAAAREKNGVYISEERYT 437 (1041)
T ss_pred CceeEEEEEeCCCcccHHHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhHhhCceEechHHHH
Confidence 99999999999999999999999999999999999999 668999999999999997
Q ss_pred HHHHHHhh---------------------------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003495 287 QEESERKS---------------------------------------------NLDQTIKLLNNTEEQLKKCQYALKEKD 321 (815)
Q Consensus 287 ~e~~e~k~---------------------------------------------~l~~~~~~l~~~~~~l~~~~~~l~e~e 321 (815)
+++.+++. .|.....++..+++.+.+++..|++++
T Consensus 438 ~~e~e~~~~~~~ieele~el~~~~~~l~~~~e~~~~~~~~~~~l~~~~~~~k~~L~~~~~el~~~~ee~~~~~~~l~~~e 517 (1041)
T KOG0243|consen 438 QEEKEKKEMAEQIEELEEELENLEKQLKDLTELYMNQLEIKELLKEEKEKLKSKLQNKNKELESLKEELQQAKATLKEEE 517 (1041)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66544432 233333445556677777788889999
Q ss_pred HHHHHHHHh-----------------------------chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 003495 322 FIISEQKKA-----------------------------GREDKLNADNRSVVENFQVELAQQIGSLCDIVDLSTCQQNEH 372 (815)
Q Consensus 322 ~~i~~~~~~-----------------------------~~~~~l~~~n~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~ 372 (815)
+++..+.++ .+++++...|+..+..|..+|.+.++.++..+....+++..+
T Consensus 518 ~ii~~~~~se~~l~~~a~~l~~~~~~s~~d~s~l~~kld~~~~~~d~n~~~~~~~~~~l~~~~~~~~~~v~~~~s~~~~~ 597 (1041)
T KOG0243|consen 518 EIISQQEKSEEKLVDRATKLRRSLEESQDDLSSLFEKLDRKDRLDDDNQEVIDDFQSQLSENLSTLHGLVASSSSQQISQ 597 (1041)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccHHHHHHHhhhhhHHHHHHHHHHhhhhhhHHHH
Confidence 988877654 677778888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhHHhHHHHHHHHhhchhHHHHHHHHHHHHH
Q 003495 373 LKHVEKLCHSLLGIHEKAVIDLKKKVTASRALYCSHMEAVQNVVRLHKACSNANLEEISAFASSNSESIKEFLASEAREA 452 (815)
Q Consensus 373 l~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (815)
+..|...+.+|+..+......++.++...++.+.++++.++.+...++.++...++.|.+.+.+++..+...+......+
T Consensus 598 l~~~~~~~~s~~s~~~~~~e~~~t~~~~~r~~~~~~~e~~q~~~~~~k~~~~s~l~~i~s~~~~~~~~~~~~l~~~~~~~ 677 (1041)
T KOG0243|consen 598 LTTMLAQMESFLSAKSKATEIMKTKISKDRDILSEVLESLQQLQEVLKKDSESCLEVINSSITSSINELESMLETIANTA 677 (1041)
T ss_pred HHHHHhhhHHHhhhhccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccchhhHHHHHHHHHHHHHHH
Confidence 99999999999999988889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 003495 453 ASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQKLLEESKSLENYAVQADENQMKSIADFQKAYE 532 (815)
Q Consensus 453 ~~~~~~l~~~l~~q~~~~~~~~~q~~~~~~~~~~~~~~~s~~~~~ff~~l~~~a~~l~~~~~~~~~~~~~~l~~~~~~~~ 532 (815)
+.++++++..|+.|++.+..+++|.+..+...+...+.+++.+.+||++++.++.++.....+.+....+.+.+|+++|+
T Consensus 678 ~~~~~~i~~~l~~q~~~~~l~~~qe~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (1041)
T KOG0243|consen 678 DDLLQNISSRLSNQQEILSLFANQELQELVLSQDSAQELSELTSTFFQTLDNQAEKLTNLFSEANISLSQKLSSFQKKFE 757 (1041)
T ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhHHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhccchHHHHHHHHHHHHhhhhhhhch
Q 003495 533 DQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGA 612 (815)
Q Consensus 533 ~~~~~e~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mq~~t~~~~~~~~~~~~~~~~~~~~~~ 612 (815)
. .+.+.++++++|+.++.++.+++.++|..++..++.........+.+.++.|++.+.+++..|..+..+.++++.+..
T Consensus 758 ~-~~~~~~~~v~~~~e~~~~~~q~~~e~~~~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~~k~~~~~~~~~~~~~~~~~~ 836 (1041)
T KOG0243|consen 758 S-IAEDEKQLVEDIKELLSSHDQRNNELLDIALQTLRSAVNSRESNLTESVSVMQNLSDDLKTIWQTLGKQNENHHNEVL 836 (1041)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhHHHhhhhHHHHHHHHHHHHHHHhhhhHHH
Confidence 9 888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhHhHHHHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHhHHHHHHHHhhhhhHHHHHHHHHHHhhHHHHHHhHH
Q 003495 613 DHSSAKHCRMELLLQECVNSGESAFGHWKRTYESVNEMESKHVSSMISLTRNASYSNEQHDVEVDTARVATEEEVAKSSE 692 (815)
Q Consensus 613 ~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 692 (815)
...+..++.|+..++.|...+.....+|+.+++++.++...+++.+|.+++.+.++|..++.++.+.+.+....++....
T Consensus 837 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~~~~~~~l~~~~~~~~~k~~~e~~s~~~~~~~~~~~~~~ 916 (1041)
T KOG0243|consen 837 SAIEEKQQAMKSVLKELLENAESQVDECKEAIESLKSLESNHVATLDSLVRGVSEQNKKLQDEFLSLLNSKLNSFDVLTN 916 (1041)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHhhhhhhhHHhhHHHHHHHhHHHhhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHhHHHhHHHHHHhHHHHhhhhhcchHHHHHHHHHHHHhhhcccCCcCCCCcccc-cCCCCcch
Q 003495 693 DALQLIASASEQEQASIAEVLDDVKAHEKTINLFRESHSAQSASIKEKAQETFQQRYMDYEHTGTTPTRCE-SEVPSKGT 771 (815)
Q Consensus 693 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~~~~~~~~eY~~~~ptg~TP~k~~-~~~ps~~s 771 (815)
+|.+.++.+...+.+...++...+.++.+.+..|..+|..+...|+.+++.|++++|++|+|++.||.+.. +++||.++
T Consensus 917 ~i~t~~~~~~~~~~~~~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~~~~~p~~~sp~~~s~~~~~s~~~ 996 (1041)
T KOG0243|consen 917 SIVTPHSILLKLDDDVLPETLVIISPSLELLGELFQDLEHKDRDIENNSGETSLDDYVVDEPSTSSPTKLSRINIPSIGS 996 (1041)
T ss_pred cccccccccccccccccccchHhhcccHHHHHHhhccccchhhhhhhccccccchhhcccccCCCCccccccCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 89999999
Q ss_pred hhhccCCchHHHHHHHhhcCCCCcccccccCCCCCCCCCCCCCC
Q 003495 772 IESLRAMPMETLLEEFRENNSYESFDVKELKPSLIPRSPLSQIN 815 (815)
Q Consensus 772 Ie~~rt~~~e~ll~~~r~~~~~~~~~~k~~~~~~~~R~Pl~~iN 815 (815)
|+++++|+.+.+++++++.+.++....++-++....|+||.++|
T Consensus 997 v~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~n 1040 (1041)
T KOG0243|consen 997 VESLTTPFSEGTLRESRLNNELEVFKTGEIKGVSNGRPPLSAQN 1040 (1041)
T ss_pred ccccccCcccccccccccccchhhhccccccCCCCCCCchhhcc
Confidence 99999999999999999999998776666667889999999987
|
|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >PF13931 Microtub_bind: Kinesin-associated microtubule-binding | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF06705 SF-assemblin: SF-assemblin/beta giardin | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PF01442 Apolipoprotein: Apolipoprotein A1/A4/E domain; InterPro: IPR000074 Exchangeable apolipoproteins (apoA, apoC and apoE) have the same genomic structure and are members of a multi-gene family that probably evolved from a common ancestral gene | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF14643 DUF4455: Domain of unknown function (DUF4455) | Back alignment and domain information |
|---|
| >PF01442 Apolipoprotein: Apolipoprotein A1/A4/E domain; InterPro: IPR000074 Exchangeable apolipoproteins (apoA, apoC and apoE) have the same genomic structure and are members of a multi-gene family that probably evolved from a common ancestral gene | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF06705 SF-assemblin: SF-assemblin/beta giardin | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF09403 FadA: Adhesion protein FadA; InterPro: IPR018543 FadA (Fusobacterium adhesin A) is an adhesin which forms two alpha helices | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF07464 ApoLp-III: Apolipophorin-III precursor (apoLp-III); InterPro: IPR010009 This family consists of several insect apolipoprotein-III sequences | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 815 | ||||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 2e-75 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 4e-75 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 5e-75 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 5e-75 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 5e-75 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 6e-75 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 6e-75 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 2e-74 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 1e-73 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 1e-70 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 3e-52 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 6e-52 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 2e-49 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-44 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 5e-42 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 5e-42 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 5e-41 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 1e-40 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 4e-40 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 1e-39 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 2e-38 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 6e-38 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 1e-37 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 8e-37 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 3e-36 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 1e-35 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 1e-35 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-35 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-35 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-35 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 2e-35 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 7e-35 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 3e-33 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 1e-32 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 1e-32 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 1e-32 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 2e-32 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 2e-32 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 2e-32 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 5e-32 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 1e-31 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 5e-31 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 3e-30 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 5e-30 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 7e-28 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 1e-27 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 5e-27 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 6e-27 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-26 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-26 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 4e-26 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 7e-26 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 1e-24 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 3e-24 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 4e-24 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 7e-19 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 4e-15 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 8e-15 |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
|
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
Score = 423 bits (1089), Expect = e-142
Identities = 137/251 (54%), Positives = 184/251 (73%), Gaps = 9/251 (3%)
Query: 20 QSGPNGELPPEAGVIPRAVQQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPDEISRAA 79
+ + E + G+IPRA+ +FD L EY++++++LELYNEE+ DLL+ D
Sbjct: 125 ELKSSWEDDSDIGIIPRALSHLFDELRMMEVEYTMRISYLELYNEELCDLLSTD------ 178
Query: 80 VEDKQKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQSSRS 139
D K ++ KG V+++GLEE V S +++ LLE+G +R+TA TL+N QSSRS
Sbjct: 179 --DTTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRS 236
Query: 140 HSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREG-RAREAGEINKSLLT 198
H++FSI +HI+E EGE+++K GKLNLVDLAGSEN+S++G +G R RE IN+SLLT
Sbjct: 237 HTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLT 296
Query: 199 LGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAH 258
LGRVI ALV+ H+PYR+SKLTRLL++SLGGRTKT IIAT+SP +EETLSTL+YAH
Sbjct: 297 LGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAH 356
Query: 259 RAKNIKNKPEV 269
RAKNI+NKPEV
Sbjct: 357 RAKNIQNKPEV 367
|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 815 | ||||
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 3e-68 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 4e-56 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 2e-54 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 1e-52 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 1e-49 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 2e-49 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 3e-49 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 6e-45 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 4e-42 |
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]
Score = 227 bits (579), Expect = 3e-68
Identities = 148/243 (60%), Positives = 183/243 (75%), Gaps = 6/243 (2%)
Query: 24 NGELPPEAGVIPRAVQQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPDEISRAAVEDK 83
E P AG+IPR + QIF+ L E+SVKV+ LE+YNEE+ DLL P +
Sbjct: 109 TWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSS------DVS 162
Query: 84 QKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQSSRSHSLF 143
++ Q+ K GV+++GLEE V + E++ +LE+G+AKR TA TL+N SSRSHS+F
Sbjct: 163 ERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVF 222
Query: 144 SITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVI 203
S+TIH+KE T +GEEL+K GKLNLVDLAGSENI RSGA + RAREAG IN+SLLTLGRVI
Sbjct: 223 SVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVI 282
Query: 204 NALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNI 263
ALVE H+PYR+SKLTR+L+DSLGGRT+T IIAT+SPA LEETLSTL+YAHRAKNI
Sbjct: 283 TALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNI 342
Query: 264 KNK 266
NK
Sbjct: 343 LNK 345
|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 815 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=0 Score=506.61 Aligned_cols=257 Identities=38% Similarity=0.604 Sum_probs=239.4
Q ss_pred CCCCCCCCCEEEEEECCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHC--CCCEEEEEEEEEEECCCCCCCCCCCCHH
Q ss_conf 8877898645788312579999999-----99992899999999995417--9806999968887725201257986102
Q 003495 4 RHEKEKGVNVQLCSMRQSGPNGELP-----PEAGVIPRAVQQIFDTLESQ--NAEYSVKVTFLELYNEEITDLLAPDEIS 76 (815)
Q Consensus 4 l~~~~~G~N~tIlaYGqTGSGKt~t-----~~~GIIPRal~~LF~~i~~~--~~~~sV~vS~lEIYnE~V~DLL~~~~~~ 76 (815)
+..+++|||+|||+||+|||||||| .++|||||++.+||..+... +.+|.|++||+|||||.++|||+|..
T Consensus 67 v~~~l~G~n~~i~aYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~-- 144 (364)
T d1sdma_ 67 VQSAVDGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQ-- 144 (364)
T ss_dssp HHHHHTTCEEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTT--
T ss_pred HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCC--
T ss_conf 999966985035522347877620165676655136789999886553103465536999988872363223357654--
Q ss_pred HHHHHHHCCCCCCEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCC
Q ss_conf 45553210586442655999768537378990697799998685320133010124578898702899999984159898
Q 003495 77 RAAVEDKQKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIKEATPEG 156 (815)
Q Consensus 77 ~~~~~~~~~~~L~i~ed~~~gv~V~gLtev~V~S~eE~~~lL~~G~~~R~~~sT~~N~~SSRSH~IftI~I~~~~~~~~~ 156 (815)
.....+.+++|+.++++|.|++++.|.++++++.+|..|..+|.+++|.+|..|||||+||+|++.+......
T Consensus 145 ------~~~~~l~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~- 217 (364)
T d1sdma_ 145 ------AKRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQ- 217 (364)
T ss_dssp ------SCCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTC-
T ss_pred ------CCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCC-
T ss_conf ------5554433133146760203530001177889789864066000445343541033363599999997036765-
Q ss_pred CCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCE
Q ss_conf 51079858898628888654356883011698878536499999999999725899877677212321013799863106
Q 003495 157 EELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCI 236 (815)
Q Consensus 157 ~~~~~~skL~lVDLAGSEr~~ksga~g~r~kEa~~INkSLlaLg~VI~aL~~~~~hIPYRdSKLTrLLqdsLGGnskT~l 236 (815)
....|+|+|||||||||..++++.|.+++|+..||+||++|++||.+|+++..|||||+||||+||+|+||||++|+|
T Consensus 218 --~~~~~kl~~vDLAGsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~t~~ 295 (364)
T d1sdma_ 218 --AIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLM 295 (364)
T ss_dssp --CEEEEEEEEEECCCCSCCCC---------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSEEEE
T ss_pred --EEEEEEEEEECHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf --035679984041003520014666750233233564320689999999749975773011213887863499950999
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 77218998994868999998989400325313665
Q 003495 237 IATVSPAVHCLEETLSTLDYAHRAKNIKNKPEVYA 271 (815)
Q Consensus 237 IatISP~~~~~eETlsTL~fA~rak~Ikn~p~i~~ 271 (815)
|+||||...+++||++||+||.|||.|+|+|.+|.
T Consensus 296 I~~isp~~~~~~eTl~TL~fa~~ak~i~n~p~~n~ 330 (364)
T d1sdma_ 296 FVNISPAESNLDETHNSLTYASRVRSIVNDPSKNV 330 (364)
T ss_dssp EEEECCBGGGHHHHHHHHHHHHHHTTCCCCCCCCE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99969870018999999999999842066783557
|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|