Citrus Sinensis ID: 003674

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800----
MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSPLEQLTAQQVLTDKISEGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISDGSNPFFDGRETPKFNLKKGGVHSGHVQTGIRDPFCIVKNGKGKCKDGYTEEVTDSEAVHVLVAKKAKTSKDVSSKLDREFYLNFLEVLNRPQQTGRFNFTTEFPYFKEFFYKPNFGTRKLGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAILVSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFANELNSKNQSAVIGSFDEQKRMWSKPPVNQTQSPI
cccccccEEEccccccccccccEEEccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccEEEcccccHHHHHHHHHccccEEEEcccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccccEEEEEEEEEEEEEcccccccccccccccccccccccccccccEEEEEccccccccccEEccccccccccccccccccccEEEEEEEccccccccccHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccccEEEEccccHHHHHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHHccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHcccccccccEEEEEccccccccccccccccccccccccccccccHHHHHHHHcccccEEEEcccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHEEEccccccccEEEEEEEEEEEcccccccEEEEEccccccEEEEccccHHHHHHHHHHHHHccccccccccHHHHHccccccccccccccc
ccccccccEEccccccccccccEccccccccEEEcccccccccccEcccccccccccEEccccccccHHccccccccccccccHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHcHHHHHHHcEEEEEcccEcccccccccccccccccccccccccccEcccccccccEEEEEEccHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHcccHHHHHHHHHHHHHHHccccccccccHEEEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccEEccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHcccccccEEEEccccccEEEEEEccccccccccccEEEEccccHHHHHHHHHHHHccccEEEEEEEEEcccccccHHHHHHHHHHHHHHccccccEEcccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHcHcHHHHccEEEEEcccEcccccccccEEEccccccEEEEEEccHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHEEEccccccccccEEEEEEEEEEEcccccccEEEEEcccccEEEEEEcccHHHHHHHHHHHHccccccEEEccHHHHHHHccccccccccccc
mmdrddisvgvggeggiledgtiladvggylpiieqgttttgycryrqaipvghagrlekdtnlgirkeflpqgsrryspleqlTAQQVLTDKISEGPITVILIGAHtnmgiflmknphlkKNIEHIYAmgggvrsknptgccpknsssscrpqqcgdpgnlftdyttnpyaefnmfgdpfaayqvfhsgipitlipldatntILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWLNDQFYASYFMWDSFTSGVAMSIMQHshnhngenefaemEYMNITVvtsnkpygisdgsnpffdgretpkfnlkkggvhsghvqtgirdpfcivkngkgkckdgyteevtdSEAVHVLVAKKAktskdvsskLDREFYLNFLEVLnrpqqtgrfnfttefpyfkeffykpnfgtrklgkpvvfdmdMSVGDFLALFYLLKAPVEVINLKAIlvsptgwanaaTIDVIYDLLHMMGRDDVQVGLgdlfatnqsdpidpsvgdckyvksiphgcggfldsdtlyglardmprsprrytaensvkygaprdtdhpelrqplaleiwdsttstlepgskitlltngpltNLAKILSSKKNATSLIQEVYIVgghlshgdrdtgnvftvplnkyaefnmfldplaaktvfesplnitliplgvqrkvssfPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVAlagdnsllkptvqVKSIKVIaegneykdgqtvidknQGIFVRVIENLDPEAYYDLFANELnsknqsavigsfdeqkrmwskppvnqtqspi
mmdrddisvgvggeggiledgtILADVGGYLPIIEQGTTTTGYCRYRQAIPvghagrlekdtnlgIRKEflpqgsrryspleQLTAQQVLTDKISEGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISDGSNPFFDGRETPKFNLKkggvhsghvqtgirdpfcivkngKGKCKDgyteevtdseaVHVLVAKkaktskdvsskldREFYLNFLEvlnrpqqtgrfNFTTEFPYFKEFFYKPNFGTRKLGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIlvsptgwaNAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDmprsprrytaensvkygaprdtdhpeLRQPLALEIWDSTTSTLEPGSKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITliplgvqrkvsSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIaegneykdgqtvidknqgIFVRVIENLDPEAYYDLFANELNSKNQSAVIGSfdeqkrmwskppvnqtqspi
MMDRDdisvgvggeggiledgTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSPLEQLTAQQVLTDKISEGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISDGSNPFFDGRETPKFNLKKGGVHSGHVQTGIRDPFCIVKNGKGKCKDGYTEEVTDSEAVHVLVAKKAKTSKDVSSKLDREFYLNFLEVLNRPQQTGRFNFTTEFPYFKEFFYKPNFGTRKLGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAILVSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAqhllsrlshlqqTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFANELNSKNQSAVIGSFDEQKRMWSKPPVNQTQSPI
********VGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLP********LEQLTAQQVLTDKISEGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGG***************************NLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWLNDQFYASYFMWDSFTSGVAMSIMQH********EFAEMEYMNITVVTSNKPYGIS*****FF******KFNLKKGGVHSGHVQTGIRDPFCIVKNGKGKCKDGYTEEVTDSEAVHVLVAKK*********KLDREFYLNFLEVLNRPQQTGRFNFTTEFPYFKEFFYKPNFGTRKLGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAILVSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLA***************************************************TLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFANEL*******************************
*MDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSPLEQLTAQQVLTDKISEGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISDGSNPFFDGRETPKFNLKKGGVHSGHVQTGIRDPFCIVKNGKGKCKDGYTEEVTDSEAVHVLVAK***********LDREFYLNFLEVLNRPQQTGRFNFTTEFPYFKEF**********LGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAILVSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFANELNSKNQSAVIG*FDE*****************
********VGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSPLEQLTAQQVLTDKISEGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNP****************CGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISDGSNPFFDGRETPKFNLKKGGVHSGHVQTGIRDPFCIVKNGKGKCKDGYTEEVTDSEAVHVLVAK********SSKLDREFYLNFLEVLNRPQQTGRFNFTTEFPYFKEFFYKPNFGTRKLGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAILVSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFANELNSKNQSAVIGSFDEQK***************
**DRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSPLEQLTAQQVLTDKISEGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISDGSNPFFDGRETPKFNLKKGGVHSGHVQTGIRDPFCIVKNGKGKCKDGYTEEVTDSEAVHVLVAKKAKTSKDVSSKLDREFYLNFLEVLNRPQQTGRFNFTTEFPYFKEFFYKPNFGTRKLGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAILVSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFANELNSKNQSAVIGSFDEQKRMWS***********
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MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSPLEQLTAQQVLTDKISEGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISDGSNPFFDGRETPKFNLKKGGVHSGHVQTGIRDPFCIVKNGKGKCKDGYTEEVTDSEAVHVLVAKKAKTSKDVSSKLDREFYLNFLEVLNRPQQTGRFNFTTEFPYFKEFFYKPNFGTRKLGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAILVSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFANELNSKNQSAVIGSFDEQKRMWSKPPVNQTQSPI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query804 2.2.26 [Sep-21-2011]
B1KHA5312 Pyrimidine-specific ribon yes no 0.131 0.339 0.335 1e-09
B2U249304 Non-specific ribonucleosi yes no 0.240 0.634 0.290 4e-08
B7LVN6304 Non-specific ribonucleosi yes no 0.208 0.552 0.303 6e-08
B1LFW0304 Non-specific ribonucleosi yes no 0.279 0.740 0.275 6e-08
Q8Z9M9306 Non-specific ribonucleosi N/A no 0.207 0.545 0.313 6e-08
B5RG86306 Non-specific ribonucleosi yes no 0.207 0.545 0.313 6e-08
B5R1P1306 Non-specific ribonucleosi yes no 0.207 0.545 0.313 6e-08
C0Q4J2306 Non-specific ribonucleosi yes no 0.207 0.545 0.313 7e-08
Q57TL0306 Non-specific ribonucleosi yes no 0.207 0.545 0.313 7e-08
Q1RGH2304 Non-specific ribonucleosi yes no 0.240 0.634 0.290 8e-08
>sp|B1KHA5|RIHA_SHEWM Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rihA PE=3 SV=1 Back     alignment and function desciption
 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 34/140 (24%)

Query: 65  GIRKEFLPQGSRRYSPLEQLTAQQVLTDKI--SEGPITVILIGAHTNMGIFLMKNPHLKK 122
           G+    LP  S  ++P + +TA +++  KI  S+ P+T++  G  TN+ + L  +P L  
Sbjct: 86  GLDGPVLPDPS--FAP-QAMTAVELMALKIKQSQAPVTLVPTGPLTNIALLLATHPELHS 142

Query: 123 NIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGDPGNLFTDYTTNPYAEFNMFGDPFA 182
           NIE I  MGG     N T                             P AEFN+F DP A
Sbjct: 143 NIEQIVLMGGAAGVGNWT-----------------------------PAAEFNIFVDPEA 173

Query: 183 AYQVFHSGIPITLIPLDATN 202
           A  VF +GIPIT+  LD T+
Sbjct: 174 ADMVFKAGIPITMCGLDVTH 193
Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively.
Shewanella woodyi (strain ATCC 51908 / MS32) (taxid: 392500)
EC: 3EC: .EC: 2EC: .EC: -EC: .EC: -
>sp|B2U249|RIHC_SHIB3 Non-specific ribonucleoside hydrolase RihC OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=rihC PE=3 SV=1 Back     alignment and function description
>sp|B7LVN6|RIHC_ESCF3 Non-specific ribonucleoside hydrolase RihC OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=rihC PE=3 SV=1 Back     alignment and function description
>sp|B1LFW0|RIHC_ECOSM Non-specific ribonucleoside hydrolase RihC OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=rihC PE=3 SV=1 Back     alignment and function description
>sp|Q8Z9M9|RIHC_SALTI Non-specific ribonucleoside hydrolase RihC OS=Salmonella typhi GN=rihC PE=3 SV=1 Back     alignment and function description
>sp|B5RG86|RIHC_SALG2 Non-specific ribonucleoside hydrolase RihC OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=rihC PE=3 SV=1 Back     alignment and function description
>sp|B5R1P1|RIHC_SALEP Non-specific ribonucleoside hydrolase RihC OS=Salmonella enteritidis PT4 (strain P125109) GN=rihC PE=3 SV=1 Back     alignment and function description
>sp|C0Q4J2|RIHC_SALPC Non-specific ribonucleoside hydrolase RihC OS=Salmonella paratyphi C (strain RKS4594) GN=rihC PE=3 SV=1 Back     alignment and function description
>sp|Q57TL0|RIHC_SALCH Non-specific ribonucleoside hydrolase RihC OS=Salmonella choleraesuis (strain SC-B67) GN=rihC PE=3 SV=1 Back     alignment and function description
>sp|Q1RGH2|RIHC_ECOUT Non-specific ribonucleoside hydrolase RihC OS=Escherichia coli (strain UTI89 / UPEC) GN=rihC PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query804
224100283 921 predicted protein [Populus trichocarpa] 0.988 0.863 0.733 0.0
225432438 1054 PREDICTED: uncharacterized protein LOC10 0.996 0.759 0.730 0.0
297736939893 unnamed protein product [Vitis vinifera] 0.996 0.896 0.730 0.0
255551579885 inosine-uridine preferring nucleoside hy 0.990 0.899 0.726 0.0
90657588880 hypothetical protein [Cleome spinosa] 0.988 0.903 0.707 0.0
357478551888 Pyrimidine-specific ribonucleoside hydro 0.987 0.894 0.689 0.0
356564566878 PREDICTED: uncharacterized protein LOC10 0.990 0.906 0.702 0.0
224144494872 predicted protein [Populus trichocarpa] 0.961 0.886 0.700 0.0
357447543882 Pyrimidine-specific ribonucleoside hydro 0.981 0.894 0.702 0.0
449432781897 PREDICTED: uncharacterized protein LOC10 0.986 0.884 0.700 0.0
>gi|224100283|ref|XP_002311814.1| predicted protein [Populus trichocarpa] gi|222851634|gb|EEE89181.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1278 bits (3307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/813 (73%), Positives = 693/813 (85%), Gaps = 18/813 (2%)

Query: 1   MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEK 60
           MM RDD+SVG+GGEGGI EDG IL DVGGYLPI+EQG  T G CRYRQAIPVG  GRL+ 
Sbjct: 101 MMGRDDLSVGMGGEGGIKEDGHILPDVGGYLPIVEQGNATAGGCRYRQAIPVGLGGRLDI 160

Query: 61  DTNLGIRKEFLPQGSRRYSPLEQLTAQQVLTDKISEGPITVILIGAHTNMGIFLMKNPHL 120
           D+N GIRK FLPQGSR+YSPL+Q TAQQVL +K+S GPIT+ +IGAHTN+GIFLMKNPHL
Sbjct: 161 DSNYGIRKAFLPQGSRKYSPLQQPTAQQVLIEKVSAGPITIFIIGAHTNIGIFLMKNPHL 220

Query: 121 KKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGDPGNLFTDYTTNPYAEFNMFGDP 180
           KKNI+HIY MGGGVRSKNPTGCCP N+SSSC+P+QCG+PGNLFTDYT+NPY EFN+FGDP
Sbjct: 221 KKNIQHIYVMGGGVRSKNPTGCCPNNASSSCQPRQCGNPGNLFTDYTSNPYGEFNIFGDP 280

Query: 181 FAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWLND 240
           FAAYQVFHSGIP+TL+PLDATNTI + +NF++ FE++Q+TYEAQYCF+SLKMARDTW +D
Sbjct: 281 FAAYQVFHSGIPVTLVPLDATNTIPINENFFEAFEQNQHTYEAQYCFQSLKMARDTWFDD 340

Query: 241 QFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISDGSNPFF 300
           QFY SYFMWDSFTSGVA+SIM+  HN NGENEFAEMEYMNITVVTSN+PYGI+DGSNPFF
Sbjct: 341 QFYTSYFMWDSFTSGVAVSIMRTLHNQNGENEFAEMEYMNITVVTSNEPYGINDGSNPFF 400

Query: 301 DGRETPKFNLKKGGVHSGHVQTGIRDPFCIVKNGKGKCKDGYTEEVTDSEAVHVLVAKKA 360
           + R+ PKFNL KGGVHSGHVQTG+RDPFCIV+NGKG+CKDGYTEEVT S+AV VLVA +A
Sbjct: 401 NDRKVPKFNLVKGGVHSGHVQTGLRDPFCIVQNGKGRCKDGYTEEVTSSDAVRVLVATRA 460

Query: 361 KTSKDVSSKLDREFYLNFLEVLNRPQQTGRFNFTTEFPYFKEFFYKPNFGTRKLGKPVVF 420
           K + D +S LDR ++ +FL+VLN P QTGRFNFTT+FP++K+ FYKP+FGT++LGKPVVF
Sbjct: 461 KPNPDSNSILDRAYFKSFLDVLNHPHQTGRFNFTTQFPHYKKVFYKPDFGTKRLGKPVVF 520

Query: 421 DMDMSVGDFLALFYLLKAPVEVINLK------------------AILVSPTGWANAATID 462
           DMDMS GDFLALFYLLK PVE INLK                  AI+V+P GWANAATID
Sbjct: 521 DMDMSAGDFLALFYLLKVPVERINLKASAFNFLDSLQQAYAISPAIIVTPVGWANAATID 580

Query: 463 VIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLA 522
           ++YD LHMMGRDD+ VGLG++FA NQSDP+  +VGDCKY+K+IPHG GG LDSDTLYGLA
Sbjct: 581 IVYDFLHMMGRDDIPVGLGEVFAMNQSDPVFSAVGDCKYLKAIPHGSGGLLDSDTLYGLA 640

Query: 523 RDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSKITLLTNGPLT 582
           RD+PRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDS   TL+PGSKIT+LTNGPLT
Sbjct: 641 RDLPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSIVRTLDPGSKITILTNGPLT 700

Query: 583 NLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVF 642
           +LAKI+ ++ N +S+IQ+VY+VGGH+SH D D GNV T+  N+Y E NMFLDPLAAKTVF
Sbjct: 701 SLAKIIQNENNTSSVIQDVYVVGGHISHSDTDKGNVLTIDSNEYTELNMFLDPLAAKTVF 760

Query: 643 ESPLNITLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHME 702
           ES L+ITLIPLGVQR+VSSFP+IL RL   N TPEA FAQ LLSRL HL++TH RY  M+
Sbjct: 761 ESSLDITLIPLGVQRRVSSFPEILERLRKINTTPEALFAQRLLSRLYHLKETHRRYQQMD 820

Query: 703 IFLGEILGAVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDP 762
            FLGEILGAV LAG+ S L PT +VK IKV+AEG E +DG+ VID+ QG  V+++E +D 
Sbjct: 821 TFLGEILGAVVLAGNFSKLDPTFRVKPIKVLAEGVESEDGRIVIDEKQGRLVKIVEKVDL 880

Query: 763 EAYYDLFANELNSKNQSAVIGSFDEQKRMWSKP 795
            AYYDLF  +L SK QSAVIGSFDEQ+R WS P
Sbjct: 881 GAYYDLFTEQLRSKEQSAVIGSFDEQRRNWSVP 913

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225432438|ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263026 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297736939|emb|CBI26140.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255551579|ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus communis] gi|223543923|gb|EEF45449.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|90657588|gb|ABD96887.1| hypothetical protein [Cleome spinosa] Back     alignment and taxonomy information
>gi|357478551|ref|XP_003609561.1| Pyrimidine-specific ribonucleoside hydrolase rihB [Medicago truncatula] gi|355510616|gb|AES91758.1| Pyrimidine-specific ribonucleoside hydrolase rihB [Medicago truncatula] Back     alignment and taxonomy information
>gi|356564566|ref|XP_003550523.1| PREDICTED: uncharacterized protein LOC100788041 [Glycine max] Back     alignment and taxonomy information
>gi|224144494|ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|222874440|gb|EEF11571.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357447543|ref|XP_003594047.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Medicago truncatula] gi|355483095|gb|AES64298.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Medicago truncatula] Back     alignment and taxonomy information
>gi|449432781|ref|XP_004134177.1| PREDICTED: uncharacterized protein LOC101216049 [Cucumis sativus] gi|449495414|ref|XP_004159833.1| PREDICTED: uncharacterized LOC101216049 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query804
TAIR|locus:2144910890 NSH3 "AT5G18860" [Arabidopsis 0.990 0.894 0.662 3.9e-298
TAIR|locus:2144950550 NSH4 "nucleoside hydrolase 4" 0.665 0.972 0.636 3e-188
TAIR|locus:2144925258 NSH5 "AT5G18870" [Arabidopsis 0.208 0.651 0.585 1.1e-52
TIGR_CMR|SPO_2470313 SPO_2470 "inosine-uridine pref 0.221 0.568 0.297 3e-06
TIGR_CMR|SO_0811318 SO_0811 "inosine-uridine prefe 0.108 0.273 0.360 6.6e-06
POMBASE|SPBC1683.06c310 SPBC1683.06c "uridine ribohydr 0.135 0.351 0.316 1.4e-05
UNIPROTKB|P41409311 rihA [Escherichia coli K-12 (t 0.113 0.292 0.330 1.4e-05
TIGR_CMR|BA_2400312 BA_2400 "inosine-uridine prefe 0.233 0.602 0.268 6e-05
UNIPROTKB|P22564304 rihC [Escherichia coli K-12 (t 0.177 0.470 0.320 7.9e-05
TAIR|locus:2032008322 URH2 "uridine-ribohydrolase 2" 0.100 0.251 0.318 8.8e-05
TAIR|locus:2144910 NSH3 "AT5G18860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2862 (1012.5 bits), Expect = 3.9e-298, P = 3.9e-298
 Identities = 532/803 (66%), Positives = 649/803 (80%)

Query:     1 MMDRDXXXXXXXXXXXXXXXXTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEK 60
             MMDRD                TI +DVGGY PIIEQG TTTG CRYRQAIP G  G L+ 
Sbjct:    87 MMDRDDIPVGVGGEGGISDDGTIHSDVGGYFPIIEQGMTTTGECRYRQAIPKGLGGLLDI 146

Query:    61 DTNLGIRKEFLPQGSRRYSPLEQLTAQQVLTDKISEGPITVILIGAHTNMGIFLMKNPHL 120
             D+N G RK+FLPQG+RRY+PL+Q TAQ+V+ DKISEGP TVIL+G+HTN  +FLM NPHL
Sbjct:   147 DSNYGFRKQFLPQGNRRYTPLQQPTAQKVIVDKISEGPTTVILLGSHTNFALFLMSNPHL 206

Query:   121 KKNIEHIYAMGGGVRSKNPTGCCPKNSS-SSCRPQQCGDPGNLFTDYTTNPYAEFNMFGD 179
             K NI+HIY MGGGVRS+NPTGCCP NS+ + C+P+QCG+ GNLFTDYT+NPY+EFN+F D
Sbjct:   207 KHNIQHIYIMGGGVRSQNPTGCCPANSTVAECQPRQCGNRGNLFTDYTSNPYSEFNIFAD 266

Query:   180 PFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEES-QNTYEAQYCFKSLKMARDTWL 238
             PFAAYQVFHSG+P+TL+PLDATNTI + + F++ FE + Q TYEAQY F SLK+ARDTW 
Sbjct:   267 PFAAYQVFHSGVPVTLVPLDATNTIPINQKFFETFENNYQRTYEAQYVFLSLKIARDTWF 326

Query:   239 NDQFYASYFMWDSFTSGVAMSIMQHS---HNHNGENEFAEMEYMNITVVTSNKPYGISDG 295
             +D+FY SYFMWDSFT+GVA+SIM++S   +N NGEN+FAEMEYMNITVVTSNKPYG SDG
Sbjct:   327 DDEFYKSYFMWDSFTAGVAVSIMRNSANKNNKNGENDFAEMEYMNITVVTSNKPYGRSDG 386

Query:   296 SNPFFDGRETPKFNLKKGGVHSGHVQTGIRDPFCIVKNG--KGKCKDGYTEEVTDSEAVH 353
             SNPFFD R TPKFNL  GGVHSGHVQTG+RDP C+ K+G  +GKCKDGYT+E++ S++V 
Sbjct:   387 SNPFFDNRRTPKFNLALGGVHSGHVQTGLRDPTCLPKSGIGRGKCKDGYTQEISGSDSVR 446

Query:   354 VLVAKKAKTSKDVSSKLDREFYLNFLEVLNRPQQTGRFNFTTEFPYFKEFFYKPNFGTRK 413
             VLVA +AK + ++ SKLDREFY++FLEVLNRP++TGRFNF+++FPY+KE  ++P+    +
Sbjct:   447 VLVATRAKPNINIKSKLDREFYVDFLEVLNRPEETGRFNFSSQFPYYKEELFRPDLSKTR 506

Query:   414 LGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAILVSPTGWANAATIDVIYDLLHMMGR 473
              GKPVVFDMDMS GDFL+LFYLLK PV+ I+LKAI+VSPTGWANAATIDV+YDLLHMMGR
Sbjct:   507 PGKPVVFDMDMSAGDFLSLFYLLKVPVDKIDLKAIIVSPTGWANAATIDVVYDLLHMMGR 566

Query:   474 DDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYT 533
             DD+ VGLGD+ A NQSDPI P VG CKYVK+IP GCGGFLDSDTLYGLARD+PRSPRRYT
Sbjct:   567 DDIPVGLGDMLALNQSDPIFPPVGGCKYVKAIPRGCGGFLDSDTLYGLARDLPRSPRRYT 626

Query:   534 AENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSKITLLTNGPLTNLAKILSSKKN 593
             AENSV +GAPRDTD PELRQPLA+E+W + T +    SKIT+LTNGPLTNLAKI+SS K 
Sbjct:   627 AENSVTHGAPRDTDRPELRQPLAIEVWQNLTKSGNGVSKITVLTNGPLTNLAKIISSDKK 686

Query:   594 ATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPL 653
             ++SLI+EVYIVGGH++    D GN+FT+P N YAEFNMFLDPLAAKTV ES LNITL+PL
Sbjct:   687 SSSLIKEVYIVGGHINREKSDKGNIFTIPSNAYAEFNMFLDPLAAKTVLESALNITLVPL 746

Query:   654 GVQRKVSSFPKILRRLCLKNKTPEAQFAXXXXXXXXXXXXTHYRYHHMEIFLGEILGAVA 713
               Q K+SSF  +L RL    KTPEA+F              H RY H+++FLGE+LGAV 
Sbjct:   747 ATQHKLSSFQTMLDRLYSSTKTPEARFVKRLLVRLQALHQKHRRYTHIDMFLGEVLGAVL 806

Query:   714 LAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFANEL 773
             L GD++ LKP ++ + IKVIAEG+E +DG+ +IDK +G  ++++E +D  +  + FA+ L
Sbjct:   807 LGGDDASLKPKMRAEHIKVIAEGDESRDGKILIDKLRGKQIKILERVDLISISESFASRL 866

Query:   774 NSKNQSAVIGSFDEQKRMWSKPP 796
             + K QSAVIGSF+EQK++WS PP
Sbjct:   867 DDKKQSAVIGSFEEQKKIWSTPP 889
GO:0016787 "hydrolase activity" evidence=ISS
GO:0005618 "cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0006148 "inosine catabolic process" evidence=IMP
GO:0006154 "adenosine catabolic process" evidence=IMP
GO:0009611 "response to wounding" evidence=IEP
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0047622 "adenosine nucleosidase activity" evidence=IMP
GO:0047724 "inosine nucleosidase activity" evidence=IMP
TAIR|locus:2144950 NSH4 "nucleoside hydrolase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144925 NSH5 "AT5G18870" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2470 SPO_2470 "inosine-uridine preferring nucleoside hydrolase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0811 SO_0811 "inosine-uridine preferring nucleoside hydrolase family protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
POMBASE|SPBC1683.06c SPBC1683.06c "uridine ribohydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|P41409 rihA [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2400 BA_2400 "inosine-uridine preferring nucleoside hydrolase family protein" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|P22564 rihC [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TAIR|locus:2032008 URH2 "uridine-ribohydrolase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query804
cd02647312 cd02647, nuc_hydro_TvIAG, nuc_hydro_ TvIAG: Nucleo 1e-70
cd02647312 cd02647, nuc_hydro_TvIAG, nuc_hydro_ TvIAG: Nucleo 4e-61
pfam01156304 pfam01156, IU_nuc_hydro, Inosine-uridine preferrin 2e-42
pfam01156304 pfam01156, IU_nuc_hydro, Inosine-uridine preferrin 1e-27
COG1957311 COG1957, URH1, Inosine-uridine nucleoside N-ribohy 6e-25
cd02651302 cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIU 2e-22
COG1957311 COG1957, URH1, Inosine-uridine nucleoside N-ribohy 3e-22
cd02651302 cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIU 3e-22
PRK10768304 PRK10768, PRK10768, ribonucleoside hydrolase RihC; 2e-18
cd00455295 cd00455, nuc_hydro, nuc_hydro: Nucleoside hydrolas 1e-17
PRK10768304 PRK10768, PRK10768, ribonucleoside hydrolase RihC; 7e-17
cd00455295 cd00455, nuc_hydro, nuc_hydro: Nucleoside hydrolas 1e-15
cd02650304 cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subg 1e-14
cd02649306 cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleos 2e-13
PRK10443311 PRK10443, rihA, ribonucleoside hydrolase 1; Provis 2e-13
cd02650304 cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subg 5e-13
cd02649306 cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleos 2e-11
cd02648367 cd02648, nuc_hydro_1, NH_1: A subgroup of nucleosi 4e-11
cd02653320 cd02653, nuc_hydro_3, NH_3: A subgroup of nucleosi 2e-10
PRK10443311 PRK10443, rihA, ribonucleoside hydrolase 1; Provis 1e-09
PLN02717316 PLN02717, PLN02717, uridine nucleosidase 2e-09
PTZ00313326 PTZ00313, PTZ00313, inosine-adenosine-guanosine-nu 7e-09
PLN02717316 PLN02717, PLN02717, uridine nucleosidase 2e-08
cd02653320 cd02653, nuc_hydro_3, NH_3: A subgroup of nucleosi 3e-08
PRK09955313 PRK09955, rihB, ribonucleoside hydrolase 2; Provis 3e-08
cd02654318 cd02654, nuc_hydro_CjNH, nuc_hydro_CjNH 6e-08
cd02654318 cd02654, nuc_hydro_CjNH, nuc_hydro_CjNH 1e-07
PTZ00313326 PTZ00313, PTZ00313, inosine-adenosine-guanosine-nu 2e-07
PRK09955313 PRK09955, rihB, ribonucleoside hydrolase 2; Provis 1e-06
cd02648367 cd02648, nuc_hydro_1, NH_1: A subgroup of nucleosi 3e-06
>gnl|CDD|239113 cd02647, nuc_hydro_TvIAG, nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax Back     alignment and domain information 
 Score =  234 bits (598), Expect = 1e-70
 Identities = 112/361 (31%), Positives = 151/361 (41%), Gaps = 57/361 (15%)

Query: 416 KPVVFDMDMSVGDFLALFYLLKAPVEVINLKAILVSPTGWANAATIDVIYDLLHMMGRDD 475
           K V+FD D +V D +AL  LLK   E ++LK I VS              D         
Sbjct: 1   KNVIFDHDGNVDDLVALLLLLK--NEKVDLKGIGVSGID----------ADCYV---EPA 45

Query: 476 VQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAE 535
           V V    +    Q D             +IP G GG              PRS RR  A 
Sbjct: 46  VSVTRKLIDRLGQRD-------------AIPVGKGGSRAV-------NPFPRSWRRDAA- 84

Query: 536 NSVKYGAPRDTDHPELRQPLALEIW--DSTTSTLEPGSKITLLTNGPLTNLAKILSSKKN 593
            SV +  P   +   +  PLA E                +TLL  GPLTNLA+ L S  +
Sbjct: 85  FSVDHL-PILNERYTVETPLAEETAQLVLIEKIKASLEPVTLLVTGPLTNLARALDSDPD 143

Query: 594 ATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPL 653
            +S I+EVYI+GG +       GNVFT P N  AEFN+F DPLAAKTVF+S L ITL+PL
Sbjct: 144 ISSNIEEVYIMGGGVD----APGNVFTPPSNGTAEFNIFWDPLAAKTVFDSGLKITLVPL 199

Query: 654 GVQRKVSS---FPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILG 710
                V     F +  R+     + P +  A    + +  L + +  Y+  ++    +LG
Sbjct: 200 DATNTVPLTREFLETDRQRFAAQRLPASDLAGQGYALVKPL-EFNSTYYMWDVLTTLVLG 258

Query: 711 AVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFA 770
           A  +  DN     T +   ++V  +G     GQTV   N      V  N +       F 
Sbjct: 259 AKEV--DN-----TKESLILEVDTDGLS--AGQTVTSPNGRPLTLVTSN-NSYGSNRFFD 308

Query: 771 N 771
           +
Sbjct: 309 D 309

Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. Nucleoside hydrolases vary in their substrate specificity. This group contains eukaryotic and bacterial proteins similar to the purine specific inosine-adenosine-guanosine-preferring nucleoside hydrolase (IAG-NH) from T. vivax. T. vivax IAG-NH is of the order of a thousand to ten thousand fold more specific towards the naturally occurring purine nucleosides, than towards the pyrimidine nucleosides. . Length = 312
>gnl|CDD|239113 cd02647, nuc_hydro_TvIAG, nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax Back     alignment and domain information
>gnl|CDD|216336 pfam01156, IU_nuc_hydro, Inosine-uridine preferring nucleoside hydrolase Back     alignment and domain information
>gnl|CDD|216336 pfam01156, IU_nuc_hydro, Inosine-uridine preferring nucleoside hydrolase Back     alignment and domain information
>gnl|CDD|224868 COG1957, URH1, Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|239117 cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|224868 COG1957, URH1, Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|239117 cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|182713 PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional Back     alignment and domain information
>gnl|CDD|238257 cd00455, nuc_hydro, nuc_hydro: Nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|182713 PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional Back     alignment and domain information
>gnl|CDD|238257 cd00455, nuc_hydro, nuc_hydro: Nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|239116 cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB) Back     alignment and domain information
>gnl|CDD|239115 cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans Back     alignment and domain information
>gnl|CDD|182465 PRK10443, rihA, ribonucleoside hydrolase 1; Provisional Back     alignment and domain information
>gnl|CDD|239116 cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB) Back     alignment and domain information
>gnl|CDD|239115 cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans Back     alignment and domain information
>gnl|CDD|239114 cd02648, nuc_hydro_1, NH_1: A subgroup of nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|239119 cd02653, nuc_hydro_3, NH_3: A subgroup of nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|182465 PRK10443, rihA, ribonucleoside hydrolase 1; Provisional Back     alignment and domain information
>gnl|CDD|178319 PLN02717, PLN02717, uridine nucleosidase Back     alignment and domain information
>gnl|CDD|140334 PTZ00313, PTZ00313, inosine-adenosine-guanosine-nucleoside hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|178319 PLN02717, PLN02717, uridine nucleosidase Back     alignment and domain information
>gnl|CDD|239119 cd02653, nuc_hydro_3, NH_3: A subgroup of nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|182166 PRK09955, rihB, ribonucleoside hydrolase 2; Provisional Back     alignment and domain information
>gnl|CDD|239120 cd02654, nuc_hydro_CjNH, nuc_hydro_CjNH Back     alignment and domain information
>gnl|CDD|239120 cd02654, nuc_hydro_CjNH, nuc_hydro_CjNH Back     alignment and domain information
>gnl|CDD|140334 PTZ00313, PTZ00313, inosine-adenosine-guanosine-nucleoside hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|182166 PRK09955, rihB, ribonucleoside hydrolase 2; Provisional Back     alignment and domain information
>gnl|CDD|239114 cd02648, nuc_hydro_1, NH_1: A subgroup of nucleoside hydrolases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 804
COG1957311 URH1 Inosine-uridine nucleoside N-ribohydrolase [N 100.0
PRK09955313 rihB ribonucleoside hydrolase 2; Provisional 100.0
PLN02717316 uridine nucleosidase 100.0
PRK10768304 ribonucleoside hydrolase RihC; Provisional 100.0
PRK10443311 rihA ribonucleoside hydrolase 1; Provisional 100.0
cd02651302 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine 100.0
cd02653320 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrola 100.0
cd02649306 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrol 100.0
cd02650304 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nu 100.0
PTZ00313326 inosine-adenosine-guanosine-nucleoside hydrolase; 100.0
PF01156312 IU_nuc_hydro: Inosine-uridine preferring nucleosid 100.0
cd02654318 nuc_hydro_CjNH nuc_hydro_CjNH. Nucleoside hydrolas 100.0
cd02647312 nuc_hydro_TvIAG nuc_hydro_ TvIAG: Nucleoside hydro 100.0
cd00455295 nuc_hydro nuc_hydro: Nucleoside hydrolases. Nucleo 100.0
cd02648367 nuc_hydro_1 NH_1: A subgroup of nucleoside hydrola 100.0
COG1957311 URH1 Inosine-uridine nucleoside N-ribohydrolase [N 100.0
PRK09955313 rihB ribonucleoside hydrolase 2; Provisional 100.0
PLN02717316 uridine nucleosidase 100.0
cd02651302 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine 100.0
cd02650304 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nu 100.0
cd02653320 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrola 100.0
PRK10443311 rihA ribonucleoside hydrolase 1; Provisional 100.0
PRK10768304 ribonucleoside hydrolase RihC; Provisional 100.0
cd02649306 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrol 100.0
cd02654318 nuc_hydro_CjNH nuc_hydro_CjNH. Nucleoside hydrolas 100.0
PTZ00313326 inosine-adenosine-guanosine-nucleoside hydrolase; 100.0
cd00455295 nuc_hydro nuc_hydro: Nucleoside hydrolases. Nucleo 100.0
cd02647312 nuc_hydro_TvIAG nuc_hydro_ TvIAG: Nucleoside hydro 100.0
PF01156312 IU_nuc_hydro: Inosine-uridine preferring nucleosid 100.0
KOG2938350 consensus Predicted inosine-uridine preferring nuc 100.0
cd02648367 nuc_hydro_1 NH_1: A subgroup of nucleoside hydrola 100.0
cd02652293 nuc_hydro_2 NH_2: A subgroup of nucleoside hydrola 100.0
KOG2938350 consensus Predicted inosine-uridine preferring nuc 99.96
cd02652293 nuc_hydro_2 NH_2: A subgroup of nucleoside hydrola 99.93
PF07632260 DUF1593: Protein of unknown function (DUF1593); In 95.28
>COG1957 URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.9e-59  Score=499.26  Aligned_cols=301  Identities=29%  Similarity=0.392  Sum_probs=253.5

Q ss_pred             CCCcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCC
Q 003674          414 LGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPI  492 (804)
Q Consensus       414 ~~~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~  492 (804)
                      +++|||||||+|+||++||+|||.+|  +++|+||| |+||...++. ..|++.+|+.+|+.+||||+|+.+||..+.  
T Consensus         1 ~~~kiiiD~DpG~DDaiAlllal~~p--~i~l~giTtv~GNv~le~t-~~Na~~~l~~~g~~~iPV~~Ga~~Pl~r~~--   75 (311)
T COG1957           1 MMRKIIIDCDPGHDDAIALLLALASP--EIDLLGITTVAGNVPLEQT-TRNALSVLELLGRADIPVYAGAARPLLREP--   75 (311)
T ss_pred             CCceEEEeCCCChhHHHHHHHHhcCC--CceEEEEEEecCcccHhHH-HHHHHHHHHHcCCCCCCeecCCCCCcCCCC--
Confidence            36899999999999999999999999  99999998 8999998876 578999999999999999999999997653  


Q ss_pred             CCCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCC
Q 003674          493 DPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGS  571 (804)
Q Consensus       493 ~p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~  571 (804)
                             .++ +..||.+||++.        .+|++..+..                  .+ .|   .++|++++ ++++
T Consensus        76 -------~~a-~~iHG~~Gl~~~--------~lp~~~~~~~------------------~~-~A---~~~ii~~l~~~~g  117 (311)
T COG1957          76 -------ITA-PEIHGESGLGGP--------ELPEPTRKLE------------------SK-HA---VDAIIDTLMANPG  117 (311)
T ss_pred             -------cch-hhhcCCcCCCCC--------CCCccccccc------------------CC-cH---HHHHHHHHHhCCC
Confidence                   233 346999999875        4666432211                  01 23   35566665 3668


Q ss_pred             cEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEe
Q 003674          572 KITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLI  651 (804)
Q Consensus       572 ~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlv  651 (804)
                      +||||++|||||||+|++++|+++++||+||||||++..    +||++     +.||||+|+|||||++||+|+++++|+
T Consensus       118 ~vtlva~GPLTNiAlAl~~~P~i~~~ik~iviMGGa~~~----~GNvt-----p~AEfNi~~DPeAA~iVf~sg~~i~mv  188 (311)
T COG1957         118 EVTLVATGPLTNIALALRKDPEIAKRIKEIVIMGGAFFV----PGNVT-----PAAEFNIWVDPEAAKIVFTSGWPITMV  188 (311)
T ss_pred             cEEEEecCChHHHHHHHHhCcchhhhhcEEEEecCccCC----CCCcC-----cchhhhhccCHHHHHHHHhCCCceEEe
Confidence            999999999999999999999999999999999999986    69997     589999999999999999999999999


Q ss_pred             cccccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccc-e--EEE
Q 003674          652 PLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT-V--QVK  728 (804)
Q Consensus       652 pldvt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~-~--~~~  728 (804)
                      |||+|+|+..+++.++++++.+ ++.++|+.++++++.++.+...  ...+.++||++|+++      +++|. |  ...
T Consensus       189 ~LdvT~q~~~t~~~~~~~~~~~-~~~~~~~~d~l~~~~~~~~~~~--g~~g~~~hD~~a~a~------l~~p~l~~~~~~  259 (311)
T COG1957         189 PLDVTHQVLLTPDVLARLRAAG-GPAAELVADLLDFYLAYYKSRQ--GLDGAPLHDPLAVAY------LLDPELFTTREA  259 (311)
T ss_pred             chhhhhhhcCCHHHHHHHHHhC-CccHHHHHHHHHHHHHHHhhcc--CCCCCCcccHHHHHH------HhChhhhcceEE
Confidence            9999999999999999999876 7888999999999998876543  222457999996665      45553 3  455


Q ss_pred             EEEEEEccCccccceEEEecC----CCcceEEEEecCHHHHHHHHHHHHhcc
Q 003674          729 SIKVIAEGNEYKDGQTVIDKN----QGIFVRVIENLDPEAYYDLFANELNSK  776 (804)
Q Consensus       729 ~v~V~~~~~~~~~G~tvvd~~----~~~~v~v~~~vD~~~f~~~l~~~L~~~  776 (804)
                      +|+|++.+ +.++|+|++|+.    ..+|++|+.++|.++|++++.++|.+.
T Consensus       260 ~V~Ve~~~-~lt~G~Tv~d~~~~~~~~~n~~v~~~vD~~~f~~~i~~~l~~~  310 (311)
T COG1957         260 NVDVETAG-GLTRGMTVVDWRGVLGKPPNAQVAVDVDVEGFLDLILEALARL  310 (311)
T ss_pred             EEEEEeCC-CCcCcceEEEecccCCCCCCeEEeeccCHHHHHHHHHHHHhcc
Confidence            67777765 589999999987    358999999999999999999999764

>PRK09955 rihB ribonucleoside hydrolase 2; Provisional Back     alignment and domain information
>PLN02717 uridine nucleosidase Back     alignment and domain information
>PRK10768 ribonucleoside hydrolase RihC; Provisional Back     alignment and domain information
>PRK10443 rihA ribonucleoside hydrolase 1; Provisional Back     alignment and domain information
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases Back     alignment and domain information
>cd02653 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrolases Back     alignment and domain information
>cd02649 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans Back     alignment and domain information
>cd02650 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB) Back     alignment and domain information
>PTZ00313 inosine-adenosine-guanosine-nucleoside hydrolase; Provisional Back     alignment and domain information
>PF01156 IU_nuc_hydro: Inosine-uridine preferring nucleoside hydrolase; InterPro: IPR001910 Inosine-uridine preferring nucleoside hydrolase (3 Back     alignment and domain information
>cd02654 nuc_hydro_CjNH nuc_hydro_CjNH Back     alignment and domain information
>cd02647 nuc_hydro_TvIAG nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax Back     alignment and domain information
>cd00455 nuc_hydro nuc_hydro: Nucleoside hydrolases Back     alignment and domain information
>cd02648 nuc_hydro_1 NH_1: A subgroup of nucleoside hydrolases Back     alignment and domain information
>COG1957 URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09955 rihB ribonucleoside hydrolase 2; Provisional Back     alignment and domain information
>PLN02717 uridine nucleosidase Back     alignment and domain information
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases Back     alignment and domain information
>cd02650 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB) Back     alignment and domain information
>cd02653 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrolases Back     alignment and domain information
>PRK10443 rihA ribonucleoside hydrolase 1; Provisional Back     alignment and domain information
>PRK10768 ribonucleoside hydrolase RihC; Provisional Back     alignment and domain information
>cd02649 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans Back     alignment and domain information
>cd02654 nuc_hydro_CjNH nuc_hydro_CjNH Back     alignment and domain information
>PTZ00313 inosine-adenosine-guanosine-nucleoside hydrolase; Provisional Back     alignment and domain information
>cd00455 nuc_hydro nuc_hydro: Nucleoside hydrolases Back     alignment and domain information
>cd02647 nuc_hydro_TvIAG nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax Back     alignment and domain information
>PF01156 IU_nuc_hydro: Inosine-uridine preferring nucleoside hydrolase; InterPro: IPR001910 Inosine-uridine preferring nucleoside hydrolase (3 Back     alignment and domain information
>KOG2938 consensus Predicted inosine-uridine preferring nucleoside hydrolase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd02648 nuc_hydro_1 NH_1: A subgroup of nucleoside hydrolases Back     alignment and domain information
>cd02652 nuc_hydro_2 NH_2: A subgroup of nucleoside hydrolases Back     alignment and domain information
>KOG2938 consensus Predicted inosine-uridine preferring nucleoside hydrolase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd02652 nuc_hydro_2 NH_2: A subgroup of nucleoside hydrolases Back     alignment and domain information
>PF07632 DUF1593: Protein of unknown function (DUF1593); InterPro: IPR011483 This is a family of proteins found in Rhodopirellula baltica that are predicted to be secreted Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query804
1q8f_A313 Crystal Structure Of The E.Coli Pyrimidine Nucleosi 1e-07
1q8f_A313 Crystal Structure Of The E.Coli Pyrimidine Nucleosi 5e-06
3mkm_A316 Crystal Structure Of The E. Coli Pyrimidine Nucleos 1e-07
3mkm_A316 Crystal Structure Of The E. Coli Pyrimidine Nucleos 6e-06
3b9x_A333 Crystal Structure Of The E. Coli Pyrimidine Nucleos 1e-07
3b9x_A333 Crystal Structure Of The E. Coli Pyrimidine Nucleos 6e-06
3g5i_A312 Crystal Structure Of The E.Coli Riha Pyrimidine Nuc 2e-07
3g5i_A312 Crystal Structure Of The E.Coli Riha Pyrimidine Nuc 2e-06
1yoe_A322 Crystal Structure Of A The E. Coli Pyrimidine Nucle 2e-07
1yoe_A322 Crystal Structure Of A The E. Coli Pyrimidine Nucle 2e-06
3epw_A338 Crystal Structure Of Trypanosoma Vivax Nucleoside H 3e-07
1r4f_A339 Inosine-Adenosine-Guanosine Preferring Nucleoside H 3e-07
1hp0_A339 Crystal Structure Of An Inosine-Adenosine-Guanosine 3e-07
3b9g_A328 Crystal Structure Of Loop Deletion Mutant Of Trypan 3e-07
1kic_A339 Inosine-adenosine-guanosine Preferring Nucleoside H 4e-07
1ezr_A314 Crystal Structure Of Nucleoside Hydrolase From Leis 3e-06
3t8j_A311 Structural Analysis Of Thermostable S. Solfataricus 6e-06
3t8i_A306 Structural Analysis Of Thermostable S. Solfataricus 8e-06
1mas_A314 Purine Nucleoside Hydrolase Length = 314 9e-06
2c40_A312 Crystal Structure Of Inosine-Uridine Preferring Nuc 1e-05
>pdb|1Q8F|A Chain A, Crystal Structure Of The E.Coli Pyrimidine Nucleoside Hydrolase Yeik Length = 313 Back     alignment and structure 
Iteration: 1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 29/123 (23%)
Query: 95  SEGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQ 154
           S+G IT++ +G  +N+ + +   P +   I  I  MGG   + N                
Sbjct: 115 SDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGN---------------- 158
Query: 155 QCGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMF 214
                   FT     P AEFN+F DP AA  VF SG+P+ ++ LD TN  + T +     
Sbjct: 159 --------FT-----PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARM 205
Query: 215 EES 217
           E +
Sbjct: 206 ERA 208
>pdb|1Q8F|A Chain A, Crystal Structure Of The E.Coli Pyrimidine Nucleoside Hydrolase Yeik Length = 313 Back     alignment and structure
>pdb|3MKM|A Chain A, Crystal Structure Of The E. Coli Pyrimidine Nucleoside Hydrolase Yeik (Apo-Form) Length = 316 Back     alignment and structure
>pdb|3MKM|A Chain A, Crystal Structure Of The E. Coli Pyrimidine Nucleoside Hydrolase Yeik (Apo-Form) Length = 316 Back     alignment and structure
>pdb|3B9X|A Chain A, Crystal Structure Of The E. Coli Pyrimidine Nucleoside Hydrolase Yeik In Complex With Inosine Length = 333 Back     alignment and structure
>pdb|3B9X|A Chain A, Crystal Structure Of The E. Coli Pyrimidine Nucleoside Hydrolase Yeik In Complex With Inosine Length = 333 Back     alignment and structure
>pdb|3G5I|A Chain A, Crystal Structure Of The E.Coli Riha Pyrimidine Nucleosidase Bound To A Iminoribitol-Based Inhibitor Length = 312 Back     alignment and structure
>pdb|3G5I|A Chain A, Crystal Structure Of The E.Coli Riha Pyrimidine Nucleosidase Bound To A Iminoribitol-Based Inhibitor Length = 312 Back     alignment and structure
>pdb|1YOE|A Chain A, Crystal Structure Of A The E. Coli Pyrimidine Nucleoside Hydrolase Ybek With Bound Ribose Length = 322 Back     alignment and structure
>pdb|1YOE|A Chain A, Crystal Structure Of A The E. Coli Pyrimidine Nucleoside Hydrolase Ybek With Bound Ribose Length = 322 Back     alignment and structure
>pdb|3EPW|A Chain A, Crystal Structure Of Trypanosoma Vivax Nucleoside Hydrolase In Complex With The Inhibitor (2r,3r,4s)-1-[(4-Hydroxy-5h-Pyrrolo[3,2- D]pyrimidin-7-Yl)methyl]-2-(Hydroxymethyl)pyrrolidin-3, 4-Diol Length = 338 Back     alignment and structure
>pdb|1R4F|A Chain A, Inosine-Adenosine-Guanosine Preferring Nucleoside Hydrolase From Trypanosoma Vivax: Trp260ala Mutant In Complex With 3- Deaza-Adenosine Length = 339 Back     alignment and structure
>pdb|1HP0|A Chain A, Crystal Structure Of An Inosine-Adenosine-Guanosine- Preferring Nucleoside Hydrolase From Trypanosoma Vivax In Complex With The Substrate Analogue 3-Deaza-Adenosine Length = 339 Back     alignment and structure
>pdb|3B9G|A Chain A, Crystal Structure Of Loop Deletion Mutant Of Trypanosoma Vivax Nucleoside Hydrolase (3gtvnh) In Complex With Immh Length = 328 Back     alignment and structure
>pdb|1KIC|A Chain A, Inosine-adenosine-guanosine Preferring Nucleoside Hydrolase From Trypanosoma Vivax: Asp10ala Mutant In Complex With Inosine Length = 339 Back     alignment and structure
>pdb|1EZR|A Chain A, Crystal Structure Of Nucleoside Hydrolase From Leishmania Major Length = 314 Back     alignment and structure
>pdb|3T8J|A Chain A, Structural Analysis Of Thermostable S. Solfataricus Pyrimidine- Specific Nucleoside Hydrolase Length = 311 Back     alignment and structure
>pdb|3T8I|A Chain A, Structural Analysis Of Thermostable S. Solfataricus Purine-Specific Nucleoside Hydrolase Length = 306 Back     alignment and structure
>pdb|1MAS|A Chain A, Purine Nucleoside Hydrolase Length = 314 Back     alignment and structure
>pdb|2C40|A Chain A, Crystal Structure Of Inosine-Uridine Preferring Nucleoside Hydrolase From Bacillus Anthracis At 2.2a Resolution Length = 312 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query804
2c40_A312 Inosine-uridine preferring nucleoside hydrolase F 3e-36
2c40_A312 Inosine-uridine preferring nucleoside hydrolase F 1e-32
2mas_A314 Inosine-uridine nucleoside N-ribohydrolase; purine 7e-32
2mas_A314 Inosine-uridine nucleoside N-ribohydrolase; purine 4e-26
1yoe_A322 Hypothetical protein YBEK; pyrimidine nucleoside h 8e-31
1yoe_A322 Hypothetical protein YBEK; pyrimidine nucleoside h 1e-25
3epw_A338 IAG-nucleoside hydrolase; rossmann fold, active si 1e-30
3epw_A338 IAG-nucleoside hydrolase; rossmann fold, active si 2e-29
3t8j_A311 Purine nucleosidase, (IUNH-1); nucleoside hydrolas 4e-29
3t8j_A311 Purine nucleosidase, (IUNH-1); nucleoside hydrolas 7e-26
3t8i_A306 Purine nucleosidase, (IUNH-2); purine nucleoside h 7e-29
3t8i_A306 Purine nucleosidase, (IUNH-2); purine nucleoside h 1e-24
1q8f_A313 Pyrimidine nucleoside hydrolase; open alpha-beta s 3e-28
1q8f_A313 Pyrimidine nucleoside hydrolase; open alpha-beta s 5e-25
3fz0_A360 Nucleoside hydrolase, putative; NH fold, open alph 2e-25
3fz0_A360 Nucleoside hydrolase, putative; NH fold, open alph 2e-20
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-14
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis} Length = 312 Back     alignment and structure
 Score =  138 bits (349), Expect = 3e-36
 Identities = 71/365 (19%), Positives = 123/365 (33%), Gaps = 66/365 (18%)

Query: 416 KPVVFDMDMSVGDFLALFYLLKAPVEVINLKAILVSP------TGWANAATIDVIYDLLH 469
           K V F+ D  V D ++LF LL+     + L  + V P         + +        ++ 
Sbjct: 2   KKVYFNHDGGVDDLVSLFLLLQMDN--VELTGVSVIPADCYLEPAMSAS------RKIID 53

Query: 470 MMGRDDVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSP 529
             G++ ++V   +      S   +P   D +             +S           +  
Sbjct: 54  RFGKNTIEVAASN------SRGKNPFPKDWRMHAFYVDALPILNES----------GKVV 97

Query: 530 RRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSKITLLTNGPLTNLAKILS 589
               A+ +  +         E                     K TLL  GPLT+LA+ L 
Sbjct: 98  THVAAKPAHHHLIETLLQTEE---------------------KTTLLFTGPLTDLARALY 136

Query: 590 SKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNIT 649
                 + I+ +  +GG         GNV     +  AE+N F DP A   V+E+ + I 
Sbjct: 137 EAPIIENKIKRLVWMGGTFRTA----GNVHEPEHDGTAEWNSFWDPEAVARVWEANIEID 192

Query: 650 LIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHME-IFLGEI 708
           LI L    +V     I  +   + K     F      +   +      +      +L ++
Sbjct: 193 LITLESTNQVPLTIDIREQWAKERKYIGIDFLG----QCYAIVPPLVHFAKNSTYYLWDV 248

Query: 709 LGAVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDL 768
           L   A  G   L    VQ  +  V   G     G+TV   + G  V V+ +++ + ++D 
Sbjct: 249 L-TAAFVGKADLA--KVQTINSIVHTYGPSQ--GRTVETDD-GRPVHVVYDVNHDRFFDY 302

Query: 769 FANEL 773
                
Sbjct: 303 ITRLA 307
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis} Length = 312 Back     alignment and structure
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A Length = 314 Back     alignment and structure
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A Length = 314 Back     alignment and structure
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A* Length = 322 Back     alignment and structure
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A* Length = 322 Back     alignment and structure
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A* Length = 338 Back     alignment and structure
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A* Length = 338 Back     alignment and structure
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus} Length = 311 Back     alignment and structure
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus} Length = 311 Back     alignment and structure
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus} Length = 306 Back     alignment and structure
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus} Length = 306 Back     alignment and structure
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A* Length = 313 Back     alignment and structure
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A* Length = 313 Back     alignment and structure
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei} Length = 360 Back     alignment and structure
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei} Length = 360 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 804
d1kica_327 c.70.1.1 (A:) Inosine-adenosine-guanosine preferri 2e-31
d1kica_327 c.70.1.1 (A:) Inosine-adenosine-guanosine preferri 8e-19
d2masa_313 c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohyd 8e-27
d2masa_313 c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohyd 9e-16
d1q8fa_308 c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK 3e-17
d1q8fa_308 c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK 4e-16
>d1kica_ c.70.1.1 (A:) Inosine-adenosine-guanosine preferring nucleoside hydrolase {Trypanosoma vivax [TaxId: 5699]} Length = 327 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleoside hydrolase
superfamily: Nucleoside hydrolase
family: Nucleoside hydrolase
domain: Inosine-adenosine-guanosine preferring nucleoside hydrolase
species: Trypanosoma vivax [TaxId: 5699]

 Score =  123 bits (309), Expect = 2e-31
 Identities = 68/377 (18%), Positives = 120/377 (31%), Gaps = 72/377 (19%)

Query: 416 KPVVFDMDMSVGDFLALFYLLKAPVEVINLKAI-LVSPTGWANAATIDVIYDLLHMMGRD 474
           K VV D   ++ DF+A+  L     E + L          +           +  M    
Sbjct: 3   KNVVLDHAGNLDDFVAMVLLASNT-EKVRLIGALCTDADCFVENGFNVTGKIMCLMHNNM 61

Query: 475 DVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTA 534
           ++ +                                        + + +    +   +  
Sbjct: 62  NLPL----------------------------------------FPIGKSAATAVNPFPK 81

Query: 535 ENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGS--------------KITLLTNGP 580
           E      A    D P L  P  +E+WD   +  E                 K+T+   GP
Sbjct: 82  EWRC--LAKNMDDMPILNIPENVELWDKIKAENEKYEGQQLLADLVMNSEEKVTICVTGP 139

Query: 581 LTNLAK-ILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAK 639
           L+N+A  I    +  TS ++E  I+GG +       GNVF    +  AE+N++ DP +AK
Sbjct: 140 LSNVAWCIDKYGEKFTSKVEECVIMGGAVDVR----GNVFLPSTDGTAEWNIYWDPASAK 195

Query: 640 TVFESP-LNITLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRY 698
           TVF  P L   +  L     V      ++R   +     +     + +  +H +      
Sbjct: 196 TVFGCPGLRRIMFSLDSTNTVPVRSPYVQRFGEQTNFLLSILVGTMWAMCTHCELLRDGD 255

Query: 699 HHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIAEGNEYKDGQTVIDKNQGIF-VRVI 757
                +  + L   A   D  +    V    I V+ +  +  +G TV    +      V 
Sbjct: 256 G---YYAWDAL-TAAYVVDQKVA--NVDPVPIDVVVDK-QPNEGATVRTDAENYPLTFVA 308

Query: 758 ENLDPEAYYDLFANELN 774
            N + E + D+      
Sbjct: 309 RNPEAEFFLDMLLRSAR 325
>d1kica_ c.70.1.1 (A:) Inosine-adenosine-guanosine preferring nucleoside hydrolase {Trypanosoma vivax [TaxId: 5699]} Length = 327 Back     information, alignment and structure
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]} Length = 313 Back     information, alignment and structure
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]} Length = 313 Back     information, alignment and structure
>d1q8fa_ c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]} Length = 308 Back     information, alignment and structure
>d1q8fa_ c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]} Length = 308 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query804
d2masa_313 Inosine-uridine nucleoside N-ribohydrolase, IU-NH 100.0
d1q8fa_308 Pyrimidine nucleoside hydrolase YeiK {Escherichia 100.0
d1kica_327 Inosine-adenosine-guanosine preferring nucleoside 100.0
d2masa_313 Inosine-uridine nucleoside N-ribohydrolase, IU-NH 100.0
d1q8fa_308 Pyrimidine nucleoside hydrolase YeiK {Escherichia 100.0
d1kica_327 Inosine-adenosine-guanosine preferring nucleoside 100.0
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleoside hydrolase
superfamily: Nucleoside hydrolase
family: Nucleoside hydrolase
domain: Inosine-uridine nucleoside N-ribohydrolase, IU-NH
species: Crithidia fasciculata [TaxId: 5656]

Probab=100.00  E-value=0  Score=456.67  Aligned_cols=302  Identities=22%  Similarity=0.272  Sum_probs=247.5

Q ss_pred             CCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf             98099966999209999999980999940399999-82899811788999999999709999727506776668999999
Q 003674          415 GKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPID  493 (804)
Q Consensus       415 ~kkVIiDtD~g~DDalAL~~lL~~p~~~idLlgIt-v~Gn~~~~~a~~~~a~~lL~~~Gr~dIPV~~Ga~~pl~~~~~~~  493 (804)
                      .||||||||+|+||++||++||.+|  +++|+||| |+||++.+++ ..|++++|+++|+.+||||+|+..|+..+..  
T Consensus         1 akkvIiDtD~G~DDa~Al~~al~~p--~vel~gIt~v~GN~~~~~~-~~n~~~ll~~~g~~~iPV~~G~~~~~~~~~~--   75 (313)
T d2masa_           1 AKKIILDCDPGLDDAVAILLAHGNP--EIELLAITTVVGNQTLAKV-TRNAQLVADIAGITGVPIAAGCDKPLVRKIM--   75 (313)
T ss_dssp             CEEEEEEECCSHHHHHHHHHHHHCT--TEEEEEEEECSSSSCHHHH-HHHHHHHHHHTTCCSCCEEECCSSCSSSCCC--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC--CCEEEEEEECCCCCCHHHH-HHHHHHHHHHHCCCCCCEEECCCCCCCCCCC--
T ss_conf             9879998999779999999996599--9679999982598478999-9999999998389998677067876323332--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
Q ss_conf             99887653345466899999964335765579999866675453345899999998778113999999987330899958
Q 003674          494 PSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSKI  573 (804)
Q Consensus       494 p~~~~~~~~~~~~hG~~Gl~d~~~l~gl~~~lp~~~~~~~~e~av~~g~~~~t~~~~~~~p~A~e~~~~i~~~~~~~~~I  573 (804)
                             . ...+||.+|+++.        .+|.+....                 .....++..+++.+++  +++++|
T Consensus        76 -------~-~~~~~g~~g~g~~--------~~p~~~~~~-----------------~~~~~a~~~~i~~~~~--~~p~~i  120 (313)
T d2masa_          76 -------T-AGHIHGESGMGTV--------AYPAEFKNK-----------------VDERHAVNLIIDLVMS--HEPKTI  120 (313)
T ss_dssp             -------C-CHHHHCSSSSTTC--------CCCSSCSSC-----------------BCSSCHHHHHHHHHHH--SCTTCE
T ss_pred             -------C-HHHCCCCCCCCCC--------CCCCCCCCC-----------------CCCHHHHHHHHHHHHH--CCCCCE
T ss_conf             -------2-0111134777875--------687532244-----------------4611346899998752--599857


Q ss_pred             EEEECCCHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf             99980572359999951951452024679934777889888996102589964545777999999998618994799546
Q 003674          574 TLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPL  653 (804)
Q Consensus       574 tIlaiGPLTNLA~al~~~Pel~s~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~iVl~s~~~itlvpl  653 (804)
                      |||++|||||||.|++++|++.++|++||+|||++..     ||++     +.+||||++|||||++||+|+++++++||
T Consensus       121 tiva~GPLTNlA~al~~~P~~~~~ik~iviMGG~~~~-----GN~~-----~~aEfN~~~DPeAA~iVl~s~~~i~~v~l  190 (313)
T d2masa_         121 TLVPTGGLTNIAMAARLEPRIVDRVKEVVLMGGGYHE-----GNAT-----SVAEFNIIIDPEAAHIVFNESWQVTMVGL  190 (313)
T ss_dssp             EEEECSCSHHHHHHHHHCTHHHHHSCEEEEECCCSSC-----CSSS-----SSCCHHHHTCHHHHHHHHHSSSCEEEECH
T ss_pred             EEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCC-----CCCC-----CCCCCCEEECHHHHHHHHCCCCCEEEECC
T ss_conf             9997477138999998615566314738995268789-----9976-----31121330084787998536998599661


Q ss_pred             CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC---EEEEEE
Q ss_conf             63321147999999998029990789999999999999974124455531135606689984356654343---699999
Q 003674          654 GVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT---VQVKSI  730 (804)
Q Consensus       654 dvT~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~LaAv~l~~~~~~l~p~---f~~~~v  730 (804)
                      |+|+++.++.+.++++.+.+ ++.++|+.+++..|.+++....  ....+.+||++|++++      ++|+   ++..++
T Consensus       191 dvt~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~D~lA~a~~------idP~l~~~~~~~v  261 (313)
T d2masa_         191 DLTHQALATPPILQRVKEVD-TNPARFMLEIMDYYTKIYQSNR--YMAAAAVHDPCAVAYV------IDPSVMTTERVPV  261 (313)
T ss_dssp             HHHTTCEECHHHHHHHHTTC-SHHHHHHHHHHHHHHHHHHSTT--CCSSEECCHHHHHHHH------HCGGGEEEEECCE
T ss_pred             HHHHCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHH------CCCCEEEEEEEEE
T ss_conf             02301147999999999740-1488999998999999888614--8688766707776873------5855158899759


Q ss_pred             EEEECCCCCCCCEEEEECCC----CCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             99972685455419995499----96469998229999999999998321
Q 003674          731 KVIAEGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLFANELNSK  776 (804)
Q Consensus       731 ~Ve~~~~~~~~G~tv~d~~~----~~~v~v~~~VD~~~f~~~l~~~L~~~  776 (804)
                      +|++++ +.+||+|++|+..    .++++|+++||.++|+++|.++|...
T Consensus       262 ~Vet~g-~~trG~tv~d~~~~~~~~~n~~V~~~vD~~~F~~~l~~~L~r~  310 (313)
T d2masa_         262 DIELTG-KLTLGMTVADFRNPRPEHCHTQVAVKLDFEKFWGLVLDALERI  310 (313)
T ss_dssp             EECSSC-SSCTTCEEECCCSSCCSSCSEEEEEEECHHHHHHHHHHHHHHH
T ss_pred             EEEECC-CCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf             999589-8878708982666789999869986177999999999999855
>d1q8fa_ c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kica_ c.70.1.1 (A:) Inosine-adenosine-guanosine preferring nucleoside hydrolase {Trypanosoma vivax [TaxId: 5699]} Back     information, alignment and structure
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1q8fa_ c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kica_ c.70.1.1 (A:) Inosine-adenosine-guanosine preferring nucleoside hydrolase {Trypanosoma vivax [TaxId: 5699]} Back     information, alignment and structure