Citrus Sinensis ID: 003738


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------80
MQSSSSSSAVQPEAILEWLQKEMGYRPLGSYSSTSMKANAPNADTIRKICRGNMIPIWGFLLKRVKSEKTVESIRKNIMVHGSSGGGESGNLVNLGKEESKSRRGGRRKDKGLGESASGSESREAALNEREMAAKEVERLRHIVRRQRKDLRARMLEISREEAERKRMLDERANYRHKQVVLEAYDEQSDEAAKIFAEYHKRLRQYVNQARDAQRTSVDSSVEVASSFTANSEKEAVYSTVKGTKSADDVILIETTRERNIRKGCESLAAHIIDKVHFSFPAYEGNGIHLNPQLEAMKLGFDFEGEIPDEVRTVIVNCLKNPPQLLQAITAYTLRLKTLISREIEKIDVRADAETLRYKYENNTVMDVSSSDATSPLNYQLYGNGKIGVDAPSRGTQNQLLERQKAHVQQFLATEDALNKAAEAKNLCQKLIKRLHGNGDAISSHSLVGATSQNVGSLRQFQLDVWSKEREAAGLRASLNTVMSEIQRLNKLCAERKEAEDSLKKKWKKIEEFDSRRSELETIYTALLKANMDAAAFWSQQPLAAREYASSTIIPACTVVVDISNSAKDLIDNEVSAFYRSPDNSLHMLPSTPQALLEAMGATGSTGPEAIAAAEKNASILTARAGARDPSAIPSICRISAALQYPAGLEGSDAGLASVLESLEFCLKLRGSEASVLEDLAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNLADEQEKLVMEKWLPELKTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVAAWHNHVKQLLAFYDKELL
cccccccccccHHHHHHHHHHHccccccccccHHHHHcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHcccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHcccccHHHHHHHHHHHHHHHHHHcc
cccccccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHccHHHHHHHHHHHHccHHHHHHHHccEEEEccccccccccccccccccccHHHcccEHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHccccccccccccccEEEEEccccccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccEEEccccccccccccEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHcHcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHcc
mqssssssavqPEAILEWLQKemgyrplgsysstsmkanapnadTIRKICRGNMIPIWGFLLKRVKSEKTVESIRKNIMVhgssgggesgnlvnlgkeesksrrggrrkdkglgesasgseSREAALNEREMAAKEVERLRHIVRRQRKDLRARMLEISREEAERKRMLDERANYRHKQVVLEAYDEQSDEAAKIFAEYHKRLRQYVNQARDAQRTSVDSSVEVAssftansekEAVYSTVkgtksaddVILIETTRERNIRKGCESLAAHIIdkvhfsfpayegngihlnpqlEAMKLgfdfegeipDEVRTVIVNCLKNPPQLLQAITAYTLRLKTLISREIEKIDVRADAETLRYkyenntvmdvsssdatsplnyqlygngkigvdapsrgtqNQLLERQKAHVQQFLATEDALNKAAEAKNLCQKLIKRLHgngdaisshslvgatsqnvgslrQFQLDVWSKEREAAGLRASLNTVMSEIQRLNKLCAERKEAEDSLKKKWKKIEEFDSRRSELETIYTALLKANMDAAAFWSQQPLAAREYAsstiipacTVVVDISNSAKDLIDNEVsafyrspdnslhmlpstPQALLEAmgatgstgpEAIAAAEKNASILTAragardpsaipsiCRISaalqypaglegsdAGLASVLESLEFCLKLRGSEASVLEDLAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNLADEQEKLVMEKWLPELKTAVLNAQKSLEDCKYVRGLLDewweqpastVVDWVTVDGQNVAAWHNHVKQLLAFYDKELL
mqssssssavqpEAILEWLQKEMGYRPLGSysstsmkanapNADTIRKICRGNMIPIWGFLLKRVKSEKTVESIRKNimvhgssgggesgnlvnlgkeesksrrggrrkdkglgesasgsesreaaLNEREMAAKEverlrhivrrqrkdlrarmleisreeaerkrmlderanyrhKQVVLEAYDEQSDEAAKIFAEYHKRLRQYVNQArdaqrtsvdssvevassftansekeavystvkgtksaddvilIETTRERNIRKGCESLAAHIIDKVHFSFPAYEGNGIHLNPQLEAMKLGFDFEGEIPDEVRTVIVNCLKNPPQLLQAITAYTLRLKTlisreiekidvradaetlrykyenntvmdvsssdatSPLNYQLYGNGKIGVDAPSRGTQNQLLERQKAHVQQFLATEDALNKAAEAKNLCQKLIKRLHGNGDAISSHSLVGATSQNVGSLRQFQLDVWSKEREAAGLRASLNTVMSEIQRLNKLCAerkeaedslkkkwkkieefdsrrsELETIYTALLKANMDAAAFWSQQPLAAREYASSTIIPACTVVVDISNSAKDLIDNEVSAFYRSPDNSLHMLPSTPQALLEAMGATGSTGPEAIAAAEKNASILTARAGARDPSAIPSICRISAALQYPAGLEGSDAGLASVLESLEFCLKLRGSEASVLEDLAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNLADEQEKLVMEKWLPELKTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVAAWHNHVKQLLAFYDKELL
MQssssssAVQPEAILEWLQKEMGYRPLGSYSSTSMKANAPNADTIRKICRGNMIPIWGFLLKRVKSEKTVESIRKNIMVHGSSGGGESGNLVNLgkeesksrrggrrkdkglgesasgsesreaalNEREMAAKEVERLRHIVRRQRKDLRARMLEISREEAERKRMLDERANYRHKQVVLEAYDEQSDEAAKIFAEYHKRLRQYVNQARDAQRTSVDSSVEVASSFTANSEKEAVYSTVKGTKSADDVILIETTRERNIRKGCESLAAHIIDKVHFSFPAYEGNGIHLNPQLEAMKLGFDFEGEIPDEVRTVIVNCLKNPPQLLQAITAYTLRLKTLISREIEKIDVRADAETLRYKYENNTVMDVSSSDATSPLNYQLYGNGKIGVDAPSRGTQNQLLERQKAHVQQFLATEDALNKAAEAKNLCQKLIKRLHGNGDAISSHSLVGATSQNVGSLRQFQLDVWSKEREAAGLRASLNTVMSEIQRLNKLCAERKEAEDSLKKKWKKIEEFDSRRSELETIYTALLKANMDAAAFWSQQPLAAREYASSTIIPACTVVVDISNSAKDLIDNEVSAFYRSPDNSLHMLPSTPQALLEAMGATGSTGPEAIAAAEKNASILTARAGARDPSAIPSICRISAALQYPAGLEGSDAGLASVLESLEFCLKLRGSEASVLEDLAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNLADEQEKLVMEKWLPELKTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVAAWHNHVKQLLAFYDKELL
**************ILEWLQKEMGY******************DTIRKICRGNMIPIWGFLLKRVKSEKTV***********************************************************************************************************QVVLEAY******AAKIFAEYHKRLRQYV*********************************V***KSADDVILIETTRERNIRKGCESLAAHIIDKVHFSFPAYEGNGIHLNPQLEAMKLGFDFEGEIPDEVRTVIVNCLKNPPQLLQAITAYTLRLKTLISREIEKIDVRADAETLRYKYENNTVMD*********LNYQLYGNGKIGV******************VQQFLATEDALNKAAEAKNLCQKLIKRLHGNGDAISSHSLVGATSQNVGSLRQFQLDVWSKEREAAGLRASLNTVMSEIQRLNKLC*************************ELETIYTALLKANMDAAAFWSQQPLAAREYASSTIIPACTVVVDISNSAKDLIDNEVSAFY****************************************************AIPSICRISAALQYPAGLEGSDAGLASVLESLEFCL************LAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNLADEQEKLVMEKWLPELKTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVAAWHNHVKQLLAFYD****
***************LEWLQKEMGYR*******************IRKICRGNMIPIWGFLLKRVKSEK***S********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************SVLESLEFC***********EDLAKAINLVHIRQDL********************************************KTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVAAWHNHVKQLLAFYDKELL
***********PEAILEWLQKEMGYRPLGSYSSTSMKANAPNADTIRKICRGNMIPIWGFLLKRVKSEKTVESIRKNIMVHGSSGGGESGNLVNL**********************************REMAAKEVERLRHIVRRQRKDLRARMLEISREEAERKRMLDERANYRHKQVVLEAYDEQSDEAAKIFAEYHKRLRQYVN*******************FTANSEKEAVYSTVKGTKSADDVILIETTRERNIRKGCESLAAHIIDKVHFSFPAYEGNGIHLNPQLEAMKLGFDFEGEIPDEVRTVIVNCLKNPPQLLQAITAYTLRLKTLISREIEKIDVRADAETLRYKYENNTVMDVSSSDATSPLNYQLYGNGKIGVDAPSRGTQNQLLERQKAHVQQFLATEDALNKAAEAKNLCQKLIKRLHGNGDAISSHSLVGATSQNVGSLRQFQLDVWSKEREAAGLRASLNTVMSEIQRLNKLCAE********KKKWKKIEEFDSRRSELETIYTALLKANMDAAAFWSQQPLAAREYASSTIIPACTVVVDISNSAKDLIDNEVSAFYRSPDNSLHMLPSTPQALLEAMGATGSTGPEAIAAAEKNASILTARAGARDPSAIPSICRISAALQYPAGLEGSDAGLASVLESLEFCLKLRGSEASVLEDLAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNLADEQEKLVMEKWLPELKTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVAAWHNHVKQLLAFYDKELL
*********VQPEAILEWLQKEMGYRPLGSYSSTSMKANAPNADTIRKICRGNMIPIWGFLLKRVKSEKTVESIRKNIMVHGS*********************************************EREMAAKEVERLRHIVRRQRKDLRARMLEISREEAERKRMLDERANYRHKQVVLEAYDEQSDEAAKIFAEYHKRLRQYVNQARDA**********************AVYSTVKGTKSADDVILIETTRERNIRKGCESLAAHIIDKVHFSFPAYEGNGIHLNPQLEAMKLGFDFEGEIPDEVRTVIVNCLKNPPQLLQAITAYTLRLKTLISREIEKIDVRADAETLRYKYENNTVMDVSSSDATSPLNYQLYGNGKI*V**PSRGTQNQLLERQKAHVQQFLATEDALNKAAEAKNLCQKLIKRLHG*******************SLRQFQLDVWSKEREAAGLRASLNTVMSEIQRLNKLCAERKEAEDSLKKKWKKIEEFDSRRSELETIYTALLKANMDAAAFWSQQPLAAREYASSTIIPACTVVVDISNSAKDLIDNEVSAFYRSPDNSLHMLPSTPQALLEAMGATGST*P***************RAGARDPSAIPSICRISAALQYPAGLEGSDAGLASVLESLEFCLKLRGSEASVLEDLAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNLADEQEKLVMEKWLPELKTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVAAWHNHVKQLLAFYDKELL
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQSSSSSSAVQPEAILEWLQKEMGYRPLGSYSSTSMKANAPNADTIRKICRGNMIPIWGFLLKRVKSEKTVESIRKNIMVHGSSGGGESGNLVNLGKEESKSRRGGRRKDKGLGESASGSESxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxMLExxxxxxxxxxxxxxxxxxxxxQVVLEAYDEQSDEAAKIFAEYHKRLRQYVNQARDAQRTSVDSSVEVASSFTANSEKEAVYSTVKGTKSADDVILIETTRERNIRKGCESLAAHIIDKVHFSFPAYEGNGIHLNPQLEAMKLGFDFEGEIPDEVRTVIVNCLKNPPQLLQAITAYTLRLKTLISREIEKIDVRADAETLRYKYENNTVMDVSSSDATSPLNYQLYGNGKIGVDAPSRGTQNQLLERQKAHVQQFLAxxxxxxxxxxxxxxxxxxxxxLHGNGDAISSHSLVGATSQNVGSLRQFQLDVWSKEREAAGLRASLNTVMSEIQRLNKLCAERKEAEDSLKKKWKKIEEFDSRRSELETIYTALLKANMDAAAFWSQQPLAAREYASSTIIPACTVVVDISNSAKDLIDNEVSAFYRSPDNSLHMLPSTPQALLEAMGATGSTGPEAIAAAEKNASILTARAGARDPSAIPSICRISAALQYPAGLEGSDAGLASVLESLEFCLKLRGSEASVLEDLAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNLADEQEKLVMEKWLPELKTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVAAWHNHVKQLLAFYDKELL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query799 2.2.26 [Sep-21-2011]
O94927633 HAUS augmin-like complex yes no 0.157 0.199 0.244 0.0005
>sp|O94927|HAUS5_HUMAN HAUS augmin-like complex subunit 5 OS=Homo sapiens GN=HAUS5 PE=1 SV=2 Back     alignment and function desciption
 Score = 47.4 bits (111), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 5/131 (3%)

Query: 26  RPLGSYSSTSM----KANAPNADTIRKICRGNMIPIWGFLLKRVKSEKTVESIRKNIMVH 81
           R LG ++   M     A AP + T+R++C G    IW ++L+ V S++TV+ IR N++ +
Sbjct: 8   RELGCWAVEEMGVPVAARAPES-TLRRLCLGQGADIWAYILQHVHSQRTVKKIRGNLLWY 66

Query: 82  GSSGGGESGNLVNLGKEESKSRRGGRRKDKGLGESASGSESREAALNEREMAAKEVERLR 141
           G     +    + L    ++ R   +  D+ L      +E+++ A+ +     ++ +R  
Sbjct: 67  GHQDSPQVRRKLELEAAVTRLRAEIQELDQSLELMERDTEAQDTAMEQARQHTQDTQRRA 126

Query: 142 HIVRRQRKDLR 152
            ++R Q   +R
Sbjct: 127 LLLRAQAGAMR 137




Contributes to mitotic spindle assembly, maintenance of centrosome integrity and completion of cytokinesis as part of the HAUS augmin-like complex.
Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query799
255569922809 conserved hypothetical protein [Ricinus 0.986 0.974 0.829 0.0
449476401800 PREDICTED: uncharacterized protein LOC10 0.996 0.995 0.804 0.0
449438731800 PREDICTED: uncharacterized protein LOC10 0.996 0.995 0.803 0.0
224120680801 predicted protein [Populus trichocarpa] 0.996 0.993 0.812 0.0
225451827791 PREDICTED: uncharacterized protein LOC10 0.981 0.991 0.824 0.0
224119202797 predicted protein [Populus trichocarpa] 0.991 0.993 0.798 0.0
356526554787 PREDICTED: uncharacterized protein LOC10 0.964 0.979 0.777 0.0
356568837787 PREDICTED: uncharacterized protein LOC10 0.964 0.979 0.775 0.0
30693316796 uncharacterized protein [Arabidopsis tha 0.989 0.993 0.775 0.0
297801730796 hypothetical protein ARALYDRAFT_916430 [ 0.989 0.993 0.770 0.0
>gi|255569922|ref|XP_002525924.1| conserved hypothetical protein [Ricinus communis] gi|223534753|gb|EEF36444.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score = 1353 bits (3502), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 662/798 (82%), Positives = 727/798 (91%), Gaps = 10/798 (1%)

Query: 12  PEAILEWLQKEMGYRPLGSYSSTSMKANAPNADTIRKICRGNMIPIWGFLLKRVKSEKTV 71
           PEAILEWLQKEMGYRPLG Y++++ K+  P+ D IRKICRGNMIPIW FL+KRVKSEKTV
Sbjct: 12  PEAILEWLQKEMGYRPLGPYNASTNKSQLPSIDAIRKICRGNMIPIWSFLIKRVKSEKTV 71

Query: 72  ESIRKNIMVHGSSGGGESGNLVNLGKEESKSRRGGRR----KDKGLGESASGS-----ES 122
           ESIRKNI+VHGSSGG ESGNLVNLGKEE   R  G      K+K        S     +S
Sbjct: 72  ESIRKNILVHGSSGGVESGNLVNLGKEEGGGRIKGGGGARRKEKVAVVVGESSSSSAVDS 131

Query: 123 REAALNEREMAAKEVERLRHIVRRQRKDLRARMLEISREEAERKRMLDERANYRHKQVVL 182
           RE AL ERE+AAKEVERLR+IVRRQRKDLRARM+E+SREEAERKRM+DERA  RHKQV+L
Sbjct: 132 REMALQERELAAKEVERLRNIVRRQRKDLRARMMEVSREEAERKRMVDERAKNRHKQVML 191

Query: 183 EAYDEQSDEAAKIFAEYHKRLRQYVNQARDAQRTSVDSSVEVASSFTANSEKEAVYSTVK 242
           EAYD+Q DEAAKIFAEYHKRL  YVNQARDAQR+S DSSVEV+SSFTANSEKEAVYSTVK
Sbjct: 192 EAYDQQCDEAAKIFAEYHKRLCHYVNQARDAQRSSFDSSVEVSSSFTANSEKEAVYSTVK 251

Query: 243 GTKSADDVILIETTRERNIRKGCESLAAHIIDKVHFSFPAYEGNGIHLNPQLEAMKLGFD 302
           GTKSA DVILIETTRERNIRK CESL+ H+I+++  SFPAYEG+GIHLNPQLEA KL  +
Sbjct: 252 GTKSAGDVILIETTRERNIRKACESLSVHMIERIRNSFPAYEGSGIHLNPQLEAAKLSIE 311

Query: 303 FEGEIPDEVRTVIVNCLKNPPQLLQAITAYTLRLKTLISREIEKIDVRADAETLRYKYEN 362
           F+GE+PDE+RTVI++CLKNPPQLLQAIT YTLRLKTLISREIEKIDVRADAE LRYKYEN
Sbjct: 312 FDGELPDEIRTVILSCLKNPPQLLQAITTYTLRLKTLISREIEKIDVRADAENLRYKYEN 371

Query: 363 NTVMDVSSSDATSPLNYQLYGNGKIGVDAPSRGTQNQLLERQKAHVQQFLATEDALNKAA 422
           N V+D+SS D +SPLNYQLYGNGKIG D PS+GTQNQLLERQKAHVQQFLATEDA+NKAA
Sbjct: 372 NRVIDISSPDPSSPLNYQLYGNGKIGTDMPSKGTQNQLLERQKAHVQQFLATEDAINKAA 431

Query: 423 EAKNLCQKLIKRLHGNGDAISSHSL-VGATSQNVGSLRQFQLDVWSKEREAAGLRASLNT 481
           EA++ CQKLIKRLHG+GD +SSHSL VG TSQN+GSLRQF+L+VW+KEREAAGLRASLNT
Sbjct: 432 EARDTCQKLIKRLHGSGDVVSSHSLGVGGTSQNIGSLRQFELEVWAKEREAAGLRASLNT 491

Query: 482 VMSEIQRLNKLCAERKEAEDSLKKKWKKIEEFDSRRSELETIYTALLKANMDAAAFWSQQ 541
           +MSEIQRLNKLCAERKEAEDSL+KKWKKIEEFD+RRSELE IYTALLKANMDAAAFW+QQ
Sbjct: 492 LMSEIQRLNKLCAERKEAEDSLRKKWKKIEEFDARRSELEAIYTALLKANMDAAAFWNQQ 551

Query: 542 PLAAREYASSTIIPACTVVVDISNSAKDLIDNEVSAFYRSPDNSLHMLPSTPQALLEAMG 601
           PLAAREYASSTIIPAC VV DI+N+AKDLID EV+AF RSPDNSL+MLPSTPQALLEAMG
Sbjct: 552 PLAAREYASSTIIPACKVVADIANNAKDLIDKEVNAFSRSPDNSLYMLPSTPQALLEAMG 611

Query: 602 ATGSTGPEAIAAAEKNASILTARAGARDPSAIPSICRISAALQYPAGLEGSDAGLASVLE 661
           +TGSTGPEA+AAAEK+A++LTARAGARDPSAIPSICR+SAALQYPAGLEGSDAGLASVLE
Sbjct: 612 STGSTGPEAVAAAEKSAALLTARAGARDPSAIPSICRVSAALQYPAGLEGSDAGLASVLE 671

Query: 662 SLEFCLKLRGSEASVLEDLAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNL 721
           SLEFCLKLRGSEAS+LEDLAKAINLVHIRQDLVESGH LLNHAYR+QQEYERTT YCL+L
Sbjct: 672 SLEFCLKLRGSEASILEDLAKAINLVHIRQDLVESGHALLNHAYRSQQEYERTTKYCLSL 731

Query: 722 ADEQEKLVMEKWLPELKTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVA 781
           A E EK+V +KWLPELKTAVLNAQK LE+C+YVRGLLD WWEQPASTVVDWVTVDGQNVA
Sbjct: 732 ASEHEKMVTDKWLPELKTAVLNAQKCLEECQYVRGLLDAWWEQPASTVVDWVTVDGQNVA 791

Query: 782 AWHNHVKQLLAFYDKELL 799
           AWHNHVKQLLAFYDKELL
Sbjct: 792 AWHNHVKQLLAFYDKELL 809




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449476401|ref|XP_004154727.1| PREDICTED: uncharacterized protein LOC101226721 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449438731|ref|XP_004137141.1| PREDICTED: uncharacterized protein LOC101208689 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224120680|ref|XP_002330925.1| predicted protein [Populus trichocarpa] gi|222873119|gb|EEF10250.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225451827|ref|XP_002278111.1| PREDICTED: uncharacterized protein LOC100242960 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224119202|ref|XP_002331254.1| predicted protein [Populus trichocarpa] gi|222873679|gb|EEF10810.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356526554|ref|XP_003531882.1| PREDICTED: uncharacterized protein LOC100788724 [Glycine max] Back     alignment and taxonomy information
>gi|356568837|ref|XP_003552614.1| PREDICTED: uncharacterized protein LOC100791067 [Glycine max] Back     alignment and taxonomy information
>gi|30693316|ref|NP_198704.2| uncharacterized protein [Arabidopsis thaliana] gi|9758065|dbj|BAB08644.1| unnamed protein product [Arabidopsis thaliana] gi|110743849|dbj|BAE99759.1| hypothetical protein [Arabidopsis thaliana] gi|332006985|gb|AED94368.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297801730|ref|XP_002868749.1| hypothetical protein ARALYDRAFT_916430 [Arabidopsis lyrata subsp. lyrata] gi|297314585|gb|EFH45008.1| hypothetical protein ARALYDRAFT_916430 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query799
TAIR|locus:2152287796 AUG5 "AT5G38880" [Arabidopsis 0.984 0.988 0.747 4e-312
RGD|2318093632 Haus5 "HAUS augmin-like comple 0.080 0.101 0.285 2.6e-06
UNIPROTKB|F1RM57633 HAUS5 "Uncharacterized protein 0.086 0.109 0.310 9.9e-06
ZFIN|ZDB-GENE-041114-150692 haus5 "HAUS augmin-like comple 0.271 0.313 0.234 2.2e-05
UNIPROTKB|G4N0Y1709 MGG_09571 "Uncharacterized pro 0.708 0.798 0.236 7e-05
UNIPROTKB|O94927633 HAUS5 "HAUS augmin-like comple 0.070 0.088 0.360 0.00016
UNIPROTKB|F1N7Z4633 HAUS5 "Uncharacterized protein 0.086 0.109 0.297 0.00024
UNIPROTKB|Q5LNN2766 SPO3171 "OmpA domain protein" 0.677 0.706 0.233 0.00027
TIGR_CMR|SPO_3171766 SPO_3171 "OmpA domain protein" 0.677 0.706 0.233 0.00027
POMBASE|SPAC4H3.14c345 SPAC4H3.14c "sequence orphan" 0.151 0.350 0.303 0.00028
TAIR|locus:2152287 AUG5 "AT5G38880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2994 (1059.0 bits), Expect = 4.0e-312, P = 4.0e-312
 Identities = 591/791 (74%), Positives = 668/791 (84%)

Query:     9 AVQPEAILEWLQKEMGYRPLGSYSSTSMKANAPNADTIRKICRGNMIPIWGFLLKRVKSE 68
             A  PEAILEWLQKEMGYR LG Y+ +S K++ P+ D IRKICRGNMIPIW FL+ RVKSE
Sbjct:     8 APTPEAILEWLQKEMGYRQLGPYNGSS-KSHVPSIDAIRKICRGNMIPIWNFLINRVKSE 66

Query:    69 KTVESIRKNIMVHGSSGGGESGNLVNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 128
             KTVE IR+NI VHG S     G+ VN                                  
Sbjct:    67 KTVERIRRNITVHGGSSNASIGSSVN-PGKEESKSKGRRKDKTVTGESSSYAEDREAALQ 125

Query:   129 EREMAAKEVERLRHIVRRQRKDLRARMLEISREEAERKRMLDERANYRHKQVVLEAYDEQ 188
             ERE+AAKEVERLR+IVRRQRKDL+ARMLE+SREEAERKRMLDERANYRHKQ +LEAYD+Q
Sbjct:   126 ERELAAKEVERLRNIVRRQRKDLKARMLEVSREEAERKRMLDERANYRHKQALLEAYDQQ 185

Query:   189 SDEAAKIFAEYHKRLRQYVNQARDAQRTSVDSSVEVASSFTANSEKEAVYSTVKGTKSAD 248
              DEA +IFAEYHKRL+ YVNQA DAQR SV+SS EV SS +ANSE+EAVYSTVKGTKSAD
Sbjct:   186 CDEATRIFAEYHKRLQVYVNQANDAQR-SVNSSNEVLSSLSANSEREAVYSTVKGTKSAD 244

Query:   249 DVILIETTRERNIRKGCESLAAHIIDKVHFSFPAYEGNGIHLNPQLEAMKLGFDFEGEIP 308
             DVIL+ETTRERNIR  C+ LA+ +I+++  SFPAYEGNGI   P+LE  KLGF+++GEI 
Sbjct:   245 DVILMETTRERNIRIVCDLLASRMIERIRNSFPAYEGNGICSLPELETAKLGFEYDGEIT 304

Query:   309 DEVRTVIVNCLKNPPQLLQAITAYTLRLKTLISREIEKIDVRADAETLRYKYENNTVMDV 368
             DE++TVIVN L+ PP LLQAI AYTLR+KTLISRE+EKIDVRADAE LRYK+ENN V D 
Sbjct:   305 DEMKTVIVNSLRGPPLLLQAIAAYTLRIKTLISREMEKIDVRADAEMLRYKFENNRVTDN 364

Query:   369 SSSDATSPLNYQLYGNGKIGVDAPSRGTQNQLLERQKAHVQQFLATEDALNKAAEAKNLC 428
             SSSD +SPL+YQ  GNGKIG D   +G+ NQLLERQKAHVQQFLATEDALNKAAEA++LC
Sbjct:   365 SSSDVSSPLSYQFNGNGKIGTDTHFQGSNNQLLERQKAHVQQFLATEDALNKAAEARDLC 424

Query:   429 QKLIKRLHGNGDAISSHSLVGATSQNVGSLRQFQLDVWSKEREAAGLRASLNTVMSEIQR 488
              K I RLHG+ D  ++HS VG T+Q+  +LRQF+LDVW KEREAAGLRASLNT++SEIQR
Sbjct:   425 HKFINRLHGSADT-ATHSFVGGTTQSGSNLRQFELDVWGKEREAAGLRASLNTLLSEIQR 483

Query:   489 LNKLCAERKEAEDSLKKKWKKIEEFDSRRSELETIYTALLKANMDAAAFWSQQPLAAREY 548
             LNKLCAERKEAEDSLKKKWKKIEEFD+RRSELETIYT LLKANMDA AFW+QQPLAAREY
Sbjct:   484 LNKLCAERKEAEDSLKKKWKKIEEFDARRSELETIYTTLLKANMDAVAFWNQQPLAAREY 543

Query:   549 ASSTIIPACTVVVDISNSAKDLIDNEVSAFYRSPDNSLHMLPSTPQALLEAMGATGSTGP 608
             AS+T+IPA  VVVDISNSAKD I+ EVSAF++SPDNSL+MLP+TPQ LLE+MGA GSTGP
Sbjct:   544 ASATVIPASEVVVDISNSAKDFIEKEVSAFFQSPDNSLYMLPATPQGLLESMGANGSTGP 603

Query:   609 EAIAAAEKNASILTARAGARDPSAIPSICRISAALQYPAGLEGSDAGLASVLESLEFCLK 668
             EA+A AEKNA++LTARAGARDPSAIPSICRISAALQYPAGLEGSDA LASVLESLEFCL+
Sbjct:   604 EAVAYAEKNAALLTARAGARDPSAIPSICRISAALQYPAGLEGSDASLASVLESLEFCLR 663

Query:   669 LRGSEASVLEDLAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNLADEQEKL 728
             +RGSEA VLEDLAKAI+LVHIRQDLVESGH+LL+HA+RAQQ+YERTTNYCL+LA EQE  
Sbjct:   664 VRGSEACVLEDLAKAIDLVHIRQDLVESGHSLLDHAFRAQQKYERTTNYCLDLASEQENT 723

Query:   729 VMEKWLPELKTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVAAWHNHVK 788
             + ++WLPEL+TAV NAQ S E CKYVRGLLDEWWEQPASTVVDWVTVDGQ+VAAW NHVK
Sbjct:   724 ISDQWLPELRTAVQNAQASSEHCKYVRGLLDEWWEQPASTVVDWVTVDGQSVAAWQNHVK 783

Query:   789 QLLAFYDKELL 799
             QLLAFYDKE L
Sbjct:   784 QLLAFYDKESL 794




GO:0008150 "biological_process" evidence=ND
GO:0005876 "spindle microtubule" evidence=IDA
GO:0051011 "microtubule minus-end binding" evidence=IDA
RGD|2318093 Haus5 "HAUS augmin-like complex, subunit 5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RM57 HAUS5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-150 haus5 "HAUS augmin-like complex, subunit 5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|G4N0Y1 MGG_09571 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|O94927 HAUS5 "HAUS augmin-like complex subunit 5" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1N7Z4 HAUS5 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q5LNN2 SPO3171 "OmpA domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3171 SPO_3171 "OmpA domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
POMBASE|SPAC4H3.14c SPAC4H3.14c "sequence orphan" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh4_pg.C_scaffold_155000030
hypothetical protein (801 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 799
PF14817632 HAUS5: HAUS augmin-like complex subunit 5 100.0
PF14817632 HAUS5: HAUS augmin-like complex subunit 5 93.23
KOG1029 1118 consensus Endocytic adaptor protein intersectin [S 87.45
KOG0971 1243 consensus Microtubule-associated protein dynactin 86.65
COG4026290 Uncharacterized protein containing TOPRIM domain, 80.36
>PF14817 HAUS5: HAUS augmin-like complex subunit 5 Back     alignment and domain information
Probab=100.00  E-value=4.2e-162  Score=1359.90  Aligned_cols=626  Identities=39%  Similarity=0.560  Sum_probs=569.5

Q ss_pred             cchHHHHHHHHHHcCCCCCCCCCcccccCCCCChHHHHhhhhcCCchhhHHHHhhhchhhhHHhHhhceeeecCCCCCCC
Q 003738           10 VQPEAILEWLQKEMGYRPLGSYSSTSMKANAPNADTIRKICRGNMIPIWGFLLKRVKSEKTVESIRKNIMVHGSSGGGES   89 (799)
Q Consensus        10 ~~aeel~rWa~eEMg~~p~g~y~~~~~~~~~Ps~~~lrrlCrGnm~~IW~fli~hV~SqrtV~~IRgNl~~~g~~~~~~~   89 (799)
                      .+|+||++||+|||||||.          .+||+++|||||+|||+|||+|||+||||+|||++|||||+|||+.+++. 
T Consensus         1 ~~a~el~~Wa~eEmg~p~~----------~~P~~~~lrrlC~G~~~~IWkfli~~V~s~rtV~~iRgNl~~~~~~~~~~-   69 (632)
T PF14817_consen    1 QLAEELKRWAQEEMGYPPA----------SLPSDDYLRRLCRGNMAPIWKFLIQHVRSQRTVRKIRGNLLWYGHQQSKE-   69 (632)
T ss_pred             CchHHHHHHHHHHhCCCCC----------CCCCHHHHHHHhccCChHHHHHHHHHcCcHhHHHHHHcceeecccccccc-
Confidence            3689999999999999944          57999999999999999999999999999999999999999999885551 


Q ss_pred             CCccccccccccccccccccccccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 003738           90 GNLVNLGKEESKSRRGGRRKDKGLGESASGSESREAALNEREMAAKEVERLRHIVRRQRKDLRARMLEISREEAERKRML  169 (799)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Re~~~~ere~l~~eVerLR~eI~~~~k~~k~~~ld~s~E~~Erq~~~  169 (799)
                                         .+          .++|.++++|++|+++|+|||++|++++++|+++|.|+..++++++++.
T Consensus        70 -------------------~~----------~~~e~~~~~r~~L~~everLraei~~l~~~I~~~e~e~~~~e~~~~q~~  120 (632)
T PF14817_consen   70 -------------------RK----------KSRENEARRRRELEKEVERLRAEIQELDKEIESREREVSRQEASREQML  120 (632)
T ss_pred             -------------------ch----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                               11          1367777889889999999999999999999999999999999999999


Q ss_pred             HHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCchhhHhhhhhhhcccccccccccCCC--Cc
Q 003738          170 DERANYRHKQVVLEAYDEQSDEAAKIFAEYHKRLRQYVNQARDAQRTSVDSSVEVASSFTANSEKEAVYSTVKGTK--SA  247 (799)
Q Consensus       170 ~e~sd~rhrqlLL~Ay~qqc~~~~~~l~e~~krLq~~v~qar~~qr~~~~~~~~~l~~~~rka~~e~~y~~~~~~~--s~  247 (799)
                      ++++|++||++||+||+++|++++++|+||++||++||++++|++               |+++.|++||++...+  ++
T Consensus       121 ~~~~~~~~k~~LL~Ay~q~c~~~~~~l~e~~~rl~~~~~~~q~~~---------------R~a~~~v~~~~~~sa~~~~~  185 (632)
T PF14817_consen  121 DKISDSRHKQLLLEAYSQQCEEQRRILREYTKRLQGQVEQLQDIQ---------------RKAKVEVEFGPSTSASSGSS  185 (632)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------hhccCceeecCCccchhhhh
Confidence            999999999999999999999999999999999999999555555               5677889999864221  34


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccCC--CCCCChhHHhhhcCCCCCCCCchhHHHHHHHHhcC--ch
Q 003738          248 DDVILIETTRERNIRKGCESLAAHIIDKVHFSFPAYEGN--GIHLNPQLEAMKLGFDFEGEIPDEVRTVIVNCLKN--PP  323 (799)
Q Consensus       248 ~~~~~lE~~~~rdVR~aC~~~~~~l~~~lqslf~a~~g~--~~~~~pql~~~k~g~~~~~~i~de~~~~ve~ll~n--P~  323 (799)
                      ++.+++||+|+||||+||+++++|| +.|++.|++|+|+  +++.+++++.++.+            ++||+++++  |+
T Consensus       186 ~~~~~lE~~v~rdVR~aC~~~~~fl-q~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------s~vE~v~~~~pP~  252 (632)
T PF14817_consen  186 DSSLGLEPAVLRDVREACELRAQFL-QSLLESFPAYGSSHAGHRDQRQASYQQWL------------SIVEKVLTNHPPN  252 (632)
T ss_pred             hhhcccchHHHHHHHHHHHHHHHHH-HHHhcccccCCCCCCCccchhhhHHHHHH------------hHHHHHHHcCCHH
Confidence            6788999999999999999999999 9999999999998  67777888877774            467777766  77


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhchHhhHHHhhhhhcCCcccccCCCCCCCCcchhhccCCcccccCCChhhhhHHHHH
Q 003738          324 QLLQAITAYTLRLKTLISREIEKIDVRADAETLRYKYENNTVMDVSSSDATSPLNYQLYGNGKIGVDAPSRGTQNQLLER  403 (799)
Q Consensus       324 hlL~AL~~~t~r~~~~i~~~t~~iDv~aDaE~LRfryEn~~~~d~sss~~~lp~~~~l~~~g~ig~~~~~~~~~~qL~E~  403 (799)
                      |||+||+|||++.+++|+++|++|||++|+|++|     |+++|.|++...+|+                   +++|+|+
T Consensus       253 ~vL~AL~~la~~~~~~i~~~~~~id~~~D~e~lr-----~~l~d~s~~~~~lps-------------------v~~Llqe  308 (632)
T PF14817_consen  253 HVLQALEHLASRRKAEIRSETESIDVRADAEYLR-----NQLEDVSDESQALPS-------------------VHQLLQE  308 (632)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhh-----hccCCCCCCccccch-------------------HHHHHHH
Confidence            9999999999999999999999999999999999     999998888777764                   4566777


Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccceeeccchhhHHHHHHHHHHHHHHH
Q 003738          404 QKAHVQQFLATEDALNKAAEAKNLCQKLIKRLHGNGDAISSHSLVGATSQNVGSLRQFQLDVWSKEREAAGLRASLNTVM  483 (799)
Q Consensus       404 Q~aHvqqF~ate~alN~aaear~~~q~L~~rL~g~~~~~~~~~~ggs~~~n~~~~~~leLevwakele~agl~Asl~~L~  483 (799)
                      +++||++|+++++++|+  ++++    |..+|.+++.+++.+++|+++.           +..++|+++||++|++++|+
T Consensus       309 ~~a~v~q~~~e~~~l~~--eaq~----l~~~L~~~~~e~~~~~~~~s~~-----------~al~~ele~~~l~A~l~~L~  371 (632)
T PF14817_consen  309 QWAHVQQFLAEEDALNK--EAQA----LSQRLQRLLEEIERRLSGSSER-----------EALALELEVAGLKASLNALR  371 (632)
T ss_pred             HHHHHHHHHHHHHHHHH--HHHH----HHHHHHHHHHHHHHHccCcchh-----------hHHHHHHHHHHHHHHHHHHH
Confidence            77999999999999977  4444    4455555555555566665442           22367799999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhchhHhHHhhcChHHHHHhhcccccCccchhhcc
Q 003738          484 SEIQRLNKLCAERKEAEDSLKKKWKKIEEFDSRRSELETIYTALLKANMDAAAFWSQQPLAAREYASSTIIPACTVVVDI  563 (799)
Q Consensus       484 se~q~L~k~~~eRkea~~sLq~KwqrIeeF~~l~~e~q~~i~aLiK~Ns~aka~l~q~p~e~~e~~~~~iiP~~~~V~~~  563 (799)
                      ++||+|+++|++||+++++|++|||+|+|||++|+++|++||+||||||++|++|+|+|+|+++|+++||||+|++|+++
T Consensus       372 se~q~L~~~~~~r~e~~~~Lq~K~q~I~~frqlv~e~QeqIr~LiK~Nsaakt~L~q~~~E~~~~~~~kl~P~~~~V~~~  451 (632)
T PF14817_consen  372 SECQRLKEAAAERQEALRSLQAKWQRILDFRQLVSEKQEQIRALIKGNSAAKTQLEQSPAEAQEFVQRKLVPQFEAVAPQ  451 (632)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhChHHHHHHHhcccCCcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcccCCCCccCCCCCchhhhHhhhcCCCCCChhHHHHHhhhhHHHHhhhCCCCCCCCcccccccccc
Q 003738          564 SNSAKDLIDNEVSAFYRSPDNSLHMLPSTPQALLEAMGATGSTGPEAIAAAEKNASILTARAGARDPSAIPSICRISAAL  643 (799)
Q Consensus       564 s~~~~d~ie~E~~~F~~~p~~~~~~Lp~~~~~~~e~~~~~~~~g~~a~~~ae~~a~~~~~~a~~r~Psa~pSI~Rls~a~  643 (799)
                      |++++|+|++||+||+++|      ||+++++.++|                          .+|+|+++|||||||+++
T Consensus       452 s~~l~~~ie~E~~~f~~~~------l~~Ll~~~~~~--------------------------~~~~P~~~lSI~rl~~~~  499 (632)
T PF14817_consen  452 SQELRDCIEREVRAFQAIP------LNALLRRRAGG--------------------------LQRDPSADLSIHRLHAAS  499 (632)
T ss_pred             HHHHHHHHHHHHHhccccc------HHHHHhhccCC--------------------------CCCCCchhhHHHHhcccC
Confidence            9999999999999999999      77777777776                          779999999999999999


Q ss_pred             cCCCCCCCCchhHHHHHHhhhhhhcccCChhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcccccccHHHHHHHhH
Q 003738          644 QYPAGLEGSDAGLASVLESLEFCLKLRGSEASVLEDLAKAINLVHIRQDLVESGHTLLNHAYRAQQEYERTTNYCLNLAD  723 (799)
Q Consensus       644 ~~~~g~~~~da~L~sll~sL~Fpl~~~~spe~ll~~la~~~~~v~~lrDl~~~~~~~L~~a~~~~~~~~~t~~~ll~~~~  723 (799)
                      +|       |+||++|||+|+||+|  |+||+||+++++.++++.|+||++++++++|.++ .+.++|+||+++|+++++
T Consensus       500 ~~-------~~~l~~l~~~L~fp~~--kapE~ll~~~~~~~~~l~~l~~~l~~~~~~l~~~-~~~~~~~~~~~~ll~~~~  569 (632)
T PF14817_consen  500 PY-------GASLISLLESLGFPLY--KAPEALLPEAISKAQDLVFLRDQLSLRRSSLLNL-KTQLPPGPTTQALLQRAA  569 (632)
T ss_pred             CC-------CchHHHHHHhcCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHH-HhcCCCCchHHHHHHHHH
Confidence            99       4999999999999999  9999999999999999999999999999999998 567999999999999999


Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHhhhhHHHHhhHHHHhhhccccccccchhcCCccHHHHHHH
Q 003738          724 EQEKLVMEKWLPELKTAVLNAQKSLEDCKYVRGLLDEWWEQPASTVVDWVTVDGQNVAAWHNH  786 (799)
Q Consensus       724 eqek~~~e~~lP~Lk~l~~~a~q~Le~c~~V~glv~eWWEQPaq~~l~wv~~~G~~~~qW~~~  786 (799)
                      +|||+++|+|||+||+++++|+||||||++|+|+|+|||||||||+||||+|||+||+||++|
T Consensus       570 e~e~~~~e~llP~Lk~~~~~~~q~Le~~~~v~~~v~~WWEQPaq~~lp~~~~~G~sl~qW~~r  632 (632)
T PF14817_consen  570 EQEKEQLERLLPRLKRLVQKAQQALEYCPQVQGAVDEWWEQPAQTALPWELVDGLSLQQWLNR  632 (632)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhhcCchhhcCCccHHHHhcC
Confidence            999999999999999999999999999999999999999999999999999999999999986



>PF14817 HAUS5: HAUS augmin-like complex subunit 5 Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query799
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-19
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-18
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 91.1 bits (225), Expect = 7e-19
 Identities = 96/676 (14%), Positives = 199/676 (29%), Gaps = 210/676 (31%)

Query: 4   SSSSSAVQPEAILEWLQKEMGYRPLGSYSSTSMKANAPNADTIRKI-CRGNMIPIWG--- 59
           S     VQ + + E L+    Y+ L   S    +   P+  T   I  R  +   +    
Sbjct: 73  SKQEEMVQ-KFVEEVLRIN--YKFL--MSPIKTEQRQPSMMTRMYIEQRDRL---YNDNQ 124

Query: 60  -FLLKRVKSEKTVESIRK---------NIMVHGSSGGGESGNLVNLGKEESKSRRGGRRK 109
            F    V   +    +R+         N+++ G  G G++     +  +   S +   + 
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT---W-VALDVCLSYKVQCKM 180

Query: 110 DKG-----LGESASGSESREAALNEREMAAKEVERLRHIVRR---QRKDLRARMLEISRE 161
           D       L        S E  L   EM    +++L + +      R D  + +      
Sbjct: 181 DFKIFWLNLKN----CNSPETVL---EM----LQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 162 EAERKRMLDERANYRHKQVVLEAYDEQSDEAAKIFAEYHKRLRQYVNQARDAQRTSVDSS 221
                R L +   Y +  +VL                             + Q      +
Sbjct: 230 IQAELRRLLKSKPYENCLLVL----------------------------LNVQ------N 255

Query: 222 VEVASSFTANSEKEAVYSTVKGTKSADDVILIETTRERNIRKGCESLAAHIIDKVHFSFP 281
            +  ++F  + +                 IL+ TTR +            + D +     
Sbjct: 256 AKAWNAFNLSCK-----------------ILL-TTRFKQ-----------VTDFL----- 281

Query: 282 AYEGNGIHLNPQLEAMKLGFDFEGEIPDEVRTVIVNCLKNPPQLL--QAITAYTLRLKTL 339
                    +  L+   +        PDEV+++++  L   PQ L  + +T    RL  +
Sbjct: 282 ---SAATTTHISLDHHSMTLT-----PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS-I 332

Query: 340 ISREIEKIDVRADAETLRYKYEN----NTVMDVSSSDATSPLNYQLYGNGKI---GVDAP 392
           I+  I       D     +K+ N     T+++ S +        +++    +       P
Sbjct: 333 IAESIRDGLATWD----NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP 388

Query: 393 SRGTQNQLLERQKAHVQQFLATEDALNKAAEAKNLCQK-LIKRLHGNGDAISSHSLVGAT 451
           +      LL      +   +   D +    +   L +  L+++       IS  S+    
Sbjct: 389 T-----ILLSL----IWFDVIKSDVMVVVNK---LHKYSLVEK-QPKESTISIPSI---- 431

Query: 452 SQNVGSLRQFQLDVWSKEREAAGLRASLNTVMSEIQRLNKLCAERKEAEDSLKKKW---- 507
                      L++  K      L  S+      +   N       +++D +        
Sbjct: 432 ----------YLELKVKLENEYALHRSI------VDHYNIPKT--FDSDDLIPPYLDQYF 473

Query: 508 --------KKIEEFDSRRSELETIYTALLKANMDAAAF-WSQQPLAAREYASSTIIPACT 558
                   K IE  + R +    ++       +D   F + +Q +     A +       
Sbjct: 474 YSHIGHHLKNIEHPE-RMTLFRMVF-------LD---FRFLEQKIRHDSTAWNASGSILN 522

Query: 559 VVVDISNSAKDLIDNEVSAFYRSPDNSLHMLPSTPQALLEAMGATGSTGPEA----IAAA 614
            +  +      + DN+   + R  +  L  LP   + L+ +               IA  
Sbjct: 523 TLQQLKFYKPYICDND-PKYERLVNAILDFLPKIEENLICS--------KYTDLLRIALM 573

Query: 615 EKNASIL--TARAGAR 628
            ++ +I     +   R
Sbjct: 574 AEDEAIFEEAHKQVQR 589


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00