Citrus Sinensis ID: 003758

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------

MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEFTKNITENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVLEETVQETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYEREREERYRQKMDKKRKMKEKMFDRLTKGYRQKTLGG

cccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHccccccEEEEccccccccHHHHccccHHHHHHHHHcccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHHHccccccEEEEccccccHHHHHHHccEEEEcccccccccHHHHHHHHHccccEEEcccccccccccccccEEEEccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccHHHHHcccccEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEccccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccEEEEEEHHHHHccccHHHHHHccccccccccccccccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc

cccccccccEEEEEcHHHHHHHccHHHHccHHHHHHHHHHHHccccEEEcccHHHHHHHHHcccccEEEEccccccccccccccccccHHHHHHHHccccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHHHcccccccEEEEcccccHHHHHHHccEEEEcccccccccHHHHHHHHHccccEEEEccccccEEEEccccEEEEccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccccccccccHHHccccccccHccccccccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccHHHHcccccEEEEEEcccccccccccccccHccEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHcHHHHHHHHHHHcccHHHHHHHHHHHHHHcccEEEEEEEccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHccccccHHccccccccccccEHEEccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccHccccHHHHHHHHHHHHHHHHccEEEEEccccccHHHHcccccccccEEEEEEEHHHHccccHHHHHHHcccccccccEEccccccEEEccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccc

mqepfhsiplvwiiqedslanrlpvYVERGFQNLLSYWKSVFSRvnvivfpdytlpMLYSVLdagnffvipgspadVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSvrhygfngdvNGVLLMADIVLYgssqveqgfPSLIVRAMTfgipvitpdfpIIKEYVAEGAQVIFfqkdnpeglSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVlnfpsdallpgpisqlqQVSWEWNLFRKeidlgtgdilnmdewgtstssrnsSVVDLLEEEFTKNitenenrsadqdtiseldwdvlhdiessEEYERLEMEQLEErmdgtfasWDDIYRNARKSerfkfeanerdegelertgqpvciyeiysgsgawpflhhgslyrGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGmfsiankvdnihkrpwigfqswraagrKVSLSISAEKVLEETVQETEGDVMYFWAHLdmdggftrnnndVLTFWSMcdilngghcrTAFEDAFRQMyglpshvealppmpedggcwsalhgwvmqtpSFLEFIMFSRMFVDSLDALNANSSKVNscllssselekkhCYCRVLELLVNVWAYhsgrkmvyldplsgslqeqhpierrrgfmwMKYFNFTLLKSMDEDlaeaaddgdyprekwlwpwtgevhwkGIYEREREERYRQKMDKKRKMKEKMFDRLTKgyrqktlgg

MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLrkengflkDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEFTknitenenrsadqdtiselDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKserfkfeanerdegelertgqPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVLEETVQETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPrekwlwpwtgevhwkgiyerereeryrqkmdkkrkmkekmfdrltkgyrqktlgg

MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEFTKNITENENRSADQDTISELDWDVLHDIesseeyerlemeqleermDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGlalssaarrlrsddvdavsrLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVLEETVQETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNAnsskvnscllssselekkHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFNFTLLKSMdedlaeaaddgdYPREKWLWPWTGEVHWKGIyerereeryrQkmdkkrkmkekmFDRLTKGYRQKTLGG

*****HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWG*************************************LDWDVLHD*********************TFASWDDIYR***********************GQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVLEETVQETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYE************************************

**EPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKS****QLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN*****************SWEWNLFRKEIDLGTGDIL*************SSVVDL********************TISELDWDVLHDIES*******************FASWDDIYRNA*****************LERTGQPVCIYEIYSGSGAWPFLHHGSLYRG*****************VSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSL***A*KVLEETVQETEGDVMYFWAHLDMDGG**RNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLS***************MWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIY*************************************

MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGT*********VDLLEEEFTKNITENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKSERFKFE**********RTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVLEETVQETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYEREREERYRQKMDKKRKMKEKMFDRLTKGYRQKTLGG

****FHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEFTKNI***ENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSS*******DDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVLEETVQETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYEREREERYRQKMDKKRKM***MFDRLTK*********

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		797
356533887		1044	PREDICTED: uncharacterized protein LOC10	0.986	0.752	0.688	0.0
225448875		1028	PREDICTED: uncharacterized protein LOC10	0.987	0.765	0.694	0.0
356574667		1045	PREDICTED: uncharacterized protein LOC10	0.983	0.750	0.683	0.0
147820655		1037	hypothetical protein VITISV_036074 [Viti	0.987	0.758	0.686	0.0
224113167		1073	predicted protein [Populus trichocarpa]	0.958	0.712	0.679	0.0
255584368		1020	transferase, transferring glycosyl group	0.972	0.759	0.701	0.0
334187426		1035	UDP-glycosyltransferase family protein [	0.993	0.765	0.655	0.0
18414574		1050	UDP-glycosyltransferase family protein [	0.993	0.754	0.655	0.0
297810537		1051	hypothetical protein ARALYDRAFT_487229 [	0.992	0.752	0.648	0.0
449441828		1034	PREDICTED: uncharacterized protein LOC10	0.991	0.764	0.653	0.0

>gi\|356533887\|ref\|XP_003535489.1\| PREDICTED: uncharacterized protein LOC100779157 [Glycine max]	Back alignment and taxonomy information

 Score = 1120 bits (2898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/802 (68%), Positives = 656/802 (81%), Gaps = 16/802 (1%)

Query: 1    MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYS 60
            MQ+PF S+PL+WIIQEDSL++RLPVY + G+++++S+W+S FSR  V+VFPD+T PMLYS
Sbjct: 252  MQDPFCSVPLIWIIQEDSLSSRLPVYEQMGWEHIVSHWRSAFSRAGVVVFPDFTYPMLYS 311

Query: 61   VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 120
             LD GNFFVIPGSP DVWA E+YSK+H K QLR+ +GF K++++V+VVGSS FY+ LSWD
Sbjct: 312  ELDTGNFFVIPGSPVDVWAAESYSKTHAKDQLRELSGFGKNDMLVLVVGSSVFYDNLSWD 371

Query: 121  YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 180
            YAVAMH VGPLL KYARRN    SFKFVFLCGNSTDGY+DALQ VASR+GL + S+RHYG
Sbjct: 372  YAVAMHSVGPLLTKYARRNGATDSFKFVFLCGNSTDGYDDALQGVASRMGLRQGSIRHYG 431

Query: 181  FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIF 240
             NGDVN VLLMADI+LYGS+Q  QGFP L++RAMTF IPV+ PDF ++K+Y+ +G   IF
Sbjct: 432  LNGDVNSVLLMADIILYGSAQEVQGFPPLLIRAMTFEIPVVVPDFSVLKKYIVDGVHGIF 491

Query: 241  FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 300
            F K NPE L  AFSL +SNG+LSKFA+ +AS+GR  AKN+LALDC+T YAR+LENVLNFP
Sbjct: 492  FSKHNPEALMNAFSLLLSNGRLSKFAQAIASSGRQLAKNVLALDCITGYARLLENVLNFP 551

Query: 301  SDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEE--- 357
            SDALLPGP+SQ+QQ SWEWNLFR EIDL   D           S+R  S+V  +E E   
Sbjct: 552  SDALLPGPVSQIQQGSWEWNLFRNEIDLSKID--------GDFSNRKVSIVYAVEHELAS 603

Query: 358  --FTKNITENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIY 415
              ++ +I EN      +D +++LDWD+L +IE SEE E  E+E+ EER +     WDDIY
Sbjct: 604  LNYSTSIFENGTEVPLRDELTQLDWDILREIEISEENEMFEVEEAEERREKGVGVWDDIY 663

Query: 416  RNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARR 475
            RNARKSE+ KFE NERDEGELERTGQPVCIYEIY+G+G WPFLHHGSLYRGL+LS  A+R
Sbjct: 664  RNARKSEKLKFEVNERDEGELERTGQPVCIYEIYNGAGVWPFLHHGSLYRGLSLSRRAQR 723

Query: 476  LRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSL 535
              SDDVDAV RL LLN T+YRDILCE+GGMF+IAN+VDNIH+RPWIGFQSWRAAGRKV+L
Sbjct: 724  QSSDDVDAVGRLPLLNDTYYRDILCEMGGMFAIANRVDNIHRRPWIGFQSWRAAGRKVAL 783

Query: 536  SISAEKVLEETVQET-EGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFE 594
            S  AEKVLEET+QE   GDV+YFW   DMD     N+N   +FW MCDILNGG+CR  F+
Sbjct: 784  SAKAEKVLEETMQENFRGDVIYFWGRFDMDQSVIGNHN-ANSFWYMCDILNGGNCRIVFQ 842

Query: 595  DAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANS 654
            + FRQMY LP H EALPPMPED G WSALH WVM TPSFLEFIMFSRMFVDS+DAL+ +S
Sbjct: 843  EGFRQMYALPPHAEALPPMPED-GYWSALHSWVMPTPSFLEFIMFSRMFVDSIDALHRDS 901

Query: 655  SKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGF 714
            +K + CLL SSE+EKKHCYCRVLELL+NVWAYHS RKMVY++P +GS++EQHPIE+R+GF
Sbjct: 902  TKYSLCLLGSSEIEKKHCYCRVLELLINVWAYHSARKMVYINPNTGSMEEQHPIEQRKGF 961

Query: 715  MWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYEREREERYRQKMDK 774
            MW KYFN +LLKSMDEDLAEAADDGD+PRE WLWP TGEVHW+GIYEREREERYR KMDK
Sbjct: 962  MWAKYFNISLLKSMDEDLAEAADDGDHPREMWLWPMTGEVHWQGIYEREREERYRLKMDK 1021

Query: 775  KRKMKEKMFDRLTKGYRQKTLG 796
            KRK KEK+F+R+  GY+QK+LG
Sbjct: 1022 KRKTKEKLFERMKYGYKQKSLG 1043

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225448875\|ref\|XP_002270269.1\| PREDICTED: uncharacterized protein LOC100254795 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356574667\|ref\|XP_003555467.1\| PREDICTED: uncharacterized protein LOC100790929 [Glycine max]	Back alignment and taxonomy information

>gi\|147820655\|emb\|CAN65363.1\| hypothetical protein VITISV_036074 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224113167\|ref\|XP_002316413.1\| predicted protein [Populus trichocarpa] gi\|222865453\|gb\|EEF02584.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|255584368\|ref\|XP_002532918.1\| transferase, transferring glycosyl groups, putative [Ricinus communis] gi\|223527311\|gb\|EEF29460.1\| transferase, transferring glycosyl groups, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|334187426\|ref\|NP_001190226.1\| UDP-glycosyltransferase family protein [Arabidopsis thaliana] gi\|332003368\|gb\|AED90751.1\| UDP-glycosyltransferase family protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|18414574\|ref\|NP_568137.1\| UDP-glycosyltransferase family protein [Arabidopsis thaliana] gi\|15450503\|gb\|AAK96544.1\| AT5g04480/T32M21_80 [Arabidopsis thaliana] gi\|24111433\|gb\|AAN46867.1\| At5g04480/T32M21_80 [Arabidopsis thaliana] gi\|332003367\|gb\|AED90750.1\| UDP-glycosyltransferase family protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297810537\|ref\|XP_002873152.1\| hypothetical protein ARALYDRAFT_487229 [Arabidopsis lyrata subsp. lyrata] gi\|297318989\|gb\|EFH49411.1\| hypothetical protein ARALYDRAFT_487229 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|449441828\|ref\|XP_004138684.1\| PREDICTED: uncharacterized protein LOC101206364 [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		797
TAIR\|locus:2184437		1050	AT5G04480 [Arabidopsis thalian	0.993	0.754	0.574	6.6e-255
TAIR\|locus:2124953		1031	AT4G01210 [Arabidopsis thalian	0.429	0.331	0.468	7.1e-141

TAIR\|locus:2184437 AT5G04480 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2454 (868.9 bits), Expect = 6.6e-255, P = 6.6e-255
 Identities = 461/803 (57%), Positives = 568/803 (70%)

Query:     1 MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYS 60
             MQEPF S+PL+WI+ ED LANRLPVY   G  +L+S+W+S F+R +V+VFP +TLPML+S
Sbjct:   253 MQEPFRSVPLIWIVHEDILANRLPVYQRMGQNSLISHWRSAFARADVVVFPQFTLPMLHS 312

Query:    61 VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 120
             VLD GNF VIP S  DVWA E+YS++H K  LR+ N F +D+++++V+GSSFFY+E SWD
Sbjct:   313 VLDDGNFVVIPESVVDVWAAESYSETHTKQNLREINEFGEDDVIILVLGSSFFYDEFSWD 372

Query:   121 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 180
              AVAMH +GPLL +Y RR    GSFKFVFL GNST G +DA+QEVASRLGL E +VRH+G
Sbjct:   373 NAVAMHMLGPLLTRYGRRKDTSGSFKFVFLYGNSTKGQSDAVQEVASRLGLTEGTVRHFG 432

Query:   181 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIF 240
              N DVN VL MADI++Y SSQ EQ FP LIVRAM+FGIP+ITPDFPI+K+Y+A+    IF
Sbjct:   433 LNEDVNRVLRMADILVYASSQEEQNFPPLIVRAMSFGIPIITPDFPIMKKYMADEVHGIF 492

Query:   241 FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 300
             F++++P+ L +AFS  IS+G+LSKFA+T+AS+GRL  KN++A +C+T YAR+LEN+L+FP
Sbjct:   493 FRRNDPDALLKAFSPLISDGRLSKFAQTIASSGRLLTKNLMATECITGYARLLENMLHFP 552

Query:   301 SDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEF-- 358
             SD  LPG ISQLQ  +WEWN FR E++     IL+            S +V  +EE+F  
Sbjct:   553 SDTFLPGSISQLQVAAWEWNFFRSELEQPKSFILD----SAYAFIGKSGIVFQVEEKFMG 608

Query:   359 ---TKNITENENRSADQDTISELDWDVLHDIXXXXXXXXXXXXXXXXXXDGTFASWDDIY 415
                + N  +N       +  S+LDWDVL +I                  +     W++IY
Sbjct:   609 VIESTNPVDNNTLFVSDELPSKLDWDVLEEIEGAEEYEKVESEELEDRMERDVEDWEEIY 668

Query:   416 RNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGXXXXXXXXX 475
             RNARKSE+ KFE NERDEGELERTG+P+CIYEIY+G+GAWPFLHHGSLYRG         
Sbjct:   669 RNARKSEKLKFEVNERDEGELERTGEPLCIYEIYNGAGAWPFLHHGSLYRGLSLSSKDRR 728

Query:   476 XXXXXXXXXXXLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSL 535
                        L LLN T+YRDILCEIGGMFS+ANKVD+IH RPWIGFQSWRAAGRKVSL
Sbjct:   729 LSSDDVDAADRLPLLNDTYYRDILCEIGGMFSVANKVDSIHMRPWIGFQSWRAAGRKVSL 788

Query:   536 SISAEKVLEETV-QETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFE 594
             S  AE+ LE  + QET+G+++YFW  LD+DG    + N  LTFWSMCDILN G+CRT FE
Sbjct:   789 SSKAEESLENIIKQETKGEIIYFWTRLDIDGDAYGSKN-ALTFWSMCDILNQGNCRTTFE 847

Query:   595 DAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNAXX 654
             DAFR MYGLP H+EALPPMPEDG  WS+LH WVM TPSFLEF+MFSRMF +SLDAL+   
Sbjct:   848 DAFRHMYGLPEHIEALPPMPEDGHHWSSLHNWVMPTPSFLEFVMFSRMFSESLDALHNNL 907

Query:   655 XXXXXXXXXXXXXXXXHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGF 714
                             HCYCRVLELLVNVWAYHSGRKMVY++P  GSL+EQHP+++R+G 
Sbjct:   908 NDSKSCSLASSLLERKHCYCRVLELLVNVWAYHSGRKMVYINPRDGSLEEQHPLQQRKGL 967

Query:   715 MWMKYFNFTLLKSMXXXXXXXXXXXXYPREKWLWPWTGEVHWKGIXXXXXXXXXXQXXXX 774
             MW KYFNFTLLKSM            +PRE+WLWP TGEVHWKG+               
Sbjct:   968 MWAKYFNFTLLKSMDEDLAEAADDKDHPRERWLWPLTGEVHWKGVYEREREERYRLKMDK 1027

Query:   775 XXXXXXXXFDRLTKGYRQKTLGG 797
                     +DR+  GY+QK+LGG
Sbjct:  1028 KRKTKEKLYDRIKNGYKQKSLGG 1050

GO:0005634 "nucleus" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR\|locus:2124953 AT4G01210 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_X002112	hypothetical protein (1073 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		797
pfam00534		158	pfam00534, Glycos_transf_1, Glycosyl transferases	6e-11
COG0438		381	COG0438, RfaG, Glycosyltransferase [Cell envelope	4e-08
cd03808		359	cd03808, GT1_cap1E_like, This family is most close	1e-06
cd03801		374	cd03801, GT1_YqgM_like, This family is most closel	4e-06
cd03811		353	cd03811, GT1_WabH_like, This family is most closel	1e-05
cd01635		229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	7e-05
cd03807		365	cd03807, GT1_WbnK_like, This family is most closel	1e-04
cd03821		375	cd03821, GT1_Bme6_like, This family is most closel	4e-04
TIGR03088		374	TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH	6e-04
cd03820		348	cd03820, GT1_amsD_like, This family is most closel	7e-04
cd04951		360	cd04951, GT1_WbdM_like, This family is most closel	0.002
cd03798		377	cd03798, GT1_wlbH_like, This family is most closel	0.004

>gnl\|CDD\|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1	Back alignment and domain information

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 7/136 (5%)

Query: 131 LLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGV 188
           LL++       +     + + G+        L+++A +LGL ++ V   GF  + D+  +
Sbjct: 19  LLLEAFALLKEQHPNLKLVIVGD--GEEEKKLKKLALKLGLEDN-VIFVGFVPDEDLIEL 75

Query: 189 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEG 248
             +AD+ +   S+ E GF  +++ AM  G+PVI  D     E V +G   +     + E 
Sbjct: 76  YRIADLFVL-PSRYE-GFGLVLLEAMAAGVPVIATDVGGPAEIVKDGETGLLVDPGDAEA 133

Query: 249 LSRAFSLFISNGKLSK 264
           L+ A    + + +L +
Sbjct: 134 LAEAIEKLLKDEELRE 149

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl\|CDD\|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>gnl\|CDD\|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>gnl\|CDD\|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>gnl\|CDD\|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli	Back alignment and domain information

>gnl\|CDD\|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		797
TIGR03449		405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	99.96
PRK15427		406	colanic acid biosynthesis glycosyltransferase WcaL	99.96
TIGR03088		374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	99.95
cd04962		371	GT1_like_5 This family is most closely related to	99.95
cd03813		475	GT1_like_3 This family is most closely related to	99.95
TIGR02472		439	sucr_P_syn_N sucrose-phosphate synthase, putative,	99.95
TIGR02149		388	glgA_Coryne glycogen synthase, Corynebacterium fam	99.95
PRK10307		412	putative glycosyl transferase; Provisional	99.95
PLN02871		465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	99.95
PRK15484		380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	99.94
TIGR02468		1050	sucrsPsyn_pln sucrose phosphate synthase/possible	99.94
cd03807		365	GT1_WbnK_like This family is most closely related	99.94
cd05844		367	GT1_like_7 Glycosyltransferases catalyze the trans	99.94
PRK00654		466	glgA glycogen synthase; Provisional	99.94
cd03796		398	GT1_PIG-A_like This family is most closely related	99.94
cd03819		355	GT1_WavL_like This family is most closely related	99.94
cd03821		375	GT1_Bme6_like This family is most closely related	99.93
PRK14099		485	glycogen synthase; Provisional	99.93
cd03792		372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	99.93
PLN02939		977	transferase, transferring glycosyl groups	99.93
cd03800		398	GT1_Sucrose_synthase This family is most closely r	99.93
cd03818		396	GT1_ExpC_like This family is most closely related	99.93
PRK15179		694	Vi polysaccharide biosynthesis protein TviE; Provi	99.93
TIGR02918		500	accessory Sec system glycosylation protein GtfA. M	99.93
cd03814		364	GT1_like_2 This family is most closely related to	99.93
PRK14098		489	glycogen synthase; Provisional	99.93
TIGR02095		473	glgA glycogen/starch synthases, ADP-glucose type.	99.93
PLN02316		1036	synthase/transferase	99.93
cd03817		374	GT1_UGDG_like This family is most closely related	99.92
cd03822		366	GT1_ecORF704_like This family is most closely rela	99.92
cd03805		392	GT1_ALG2_like This family is most closely related	99.92
PRK15490		578	Vi polysaccharide biosynthesis protein TviE; Provi	99.92
cd03820		348	GT1_amsD_like This family is most closely related	99.92
cd03801		374	GT1_YqgM_like This family is most closely related	99.92
cd03795		357	GT1_like_4 This family is most closely related to	99.92
cd04951		360	GT1_WbdM_like This family is most closely related	99.92
cd03812		358	GT1_CapH_like This family is most closely related	99.92
TIGR02470		784	sucr_synth sucrose synthase. This model represents	99.92
cd03798		377	GT1_wlbH_like This family is most closely related	99.92
cd03791		476	GT1_Glycogen_synthase_DULL1_like This family is mo	99.92
cd03811		353	GT1_WabH_like This family is most closely related	99.92
cd04949		372	GT1_gtfA_like This family is most closely related	99.91
cd03809		365	GT1_mtfB_like This family is most closely related	99.91
cd03799		355	GT1_amsK_like This is a family of GT1 glycosyltran	99.91
PRK10125		405	putative glycosyl transferase; Provisional	99.91
cd03825		365	GT1_wcfI_like This family is most closely related	99.91
cd04955		363	GT1_like_6 This family is most closely related to	99.91
PLN00142		815	sucrose synthase	99.91
cd03808		359	GT1_cap1E_like This family is most closely related	99.91
cd03794		394	GT1_wbuB_like This family is most closely related	99.91
cd04946		407	GT1_AmsK_like This family is most closely related	99.91
PRK09922		359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	99.9
PHA01630		331	putative group 1 glycosyl transferase	99.9
PLN02949		463	transferase, transferring glycosyl groups	99.9
cd03823		359	GT1_ExpE7_like This family is most closely related	99.89
TIGR03087		397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	99.89
cd03816		415	GT1_ALG1_like This family is most closely related	99.89
cd03806		419	GT1_ALG11_like This family is most closely related	99.89
cd03802		335	GT1_AviGT4_like This family is most closely relate	99.88
cd03804		351	GT1_wbaZ_like This family is most closely related	99.88
PF00534		172	Glycos_transf_1: Glycosyl transferases group 1; In	99.87
PLN02501		794	digalactosyldiacylglycerol synthase	99.86
PLN02846		462	digalactosyldiacylglycerol synthase	99.85
PHA01633		335	putative glycosyl transferase group 1	99.85
PLN02275		371	transferase, transferring glycosyl groups	99.84
PRK05749		425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.81
cd03793		590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.81
cd03788		460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.81
TIGR02400		456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.79
PLN02605		382	monogalactosyldiacylglycerol synthase	99.76
KOG1111		426	consensus N-acetylglucosaminyltransferase complex,	99.75
cd04950		373	GT1_like_1 Glycosyltransferases catalyze the trans	99.73
PRK13609		380	diacylglycerol glucosyltransferase; Provisional	99.71
cd03785		350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.7
PRK13608		391	diacylglycerol glucosyltransferase; Provisional	99.7
PRK00726		357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.69
PLN03063		797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.68
COG0438		381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.66
TIGR01133		348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.66
KOG0853		495	consensus Glycosyltransferase [Cell wall/membrane/	99.63
PRK14501		726	putative bifunctional trehalose-6-phosphate syntha	99.61
COG0297		487	GlgA Glycogen synthase [Carbohydrate transport and	99.54
PRK00025		380	lpxB lipid-A-disaccharide synthase; Reviewed	99.52
PRK09814		333	beta-1,6-galactofuranosyltransferase; Provisional	99.48
TIGR02398		487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.47
TIGR00236		365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.46
PF13692		135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.45
cd01635		229	Glycosyltransferase_GTB_type Glycosyltransferases	99.4
cd03786		363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.38
TIGR03713		519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.38
KOG1387		465	consensus Glycosyltransferase [Cell wall/membrane/	99.23
PLN03064		934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.21
TIGR00215		385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.04
PF13524		92	Glyco_trans_1_2: Glycosyl transferases group 1	99.04
TIGR02919		438	accessory Sec system glycosyltransferase GtfB. Mem	99.02
COG1519		419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	98.92
KOG2941		444	consensus Beta-1,4-mannosyltransferase [Posttransl	98.91
COG0707		357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	98.86
TIGR02094		601	more_P_ylases alpha-glucan phosphorylases. This fa	98.73
PF05693		633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	98.73
PRK10117		474	trehalose-6-phosphate synthase; Provisional	98.58
PF00982		474	Glyco_transf_20: Glycosyltransferase family 20; In	98.55
TIGR03492		396	conserved hypothetical protein. This protein famil	98.37
cd04299		778	GT1_Glycogen_Phosphorylase_like This family is mos	98.32
PRK12446		352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	98.31
TIGR03568		365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	98.29
PLN02205		854	alpha,alpha-trehalose-phosphate synthase [UDP-form	98.24
PF13844		468	Glyco_transf_41: Glycosyl transferase family 41; P	98.17
COG0380		486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	98.13
TIGR01426		392	MGT glycosyltransferase, MGT family. This model de	97.85
TIGR03590		279	PseG pseudaminic acid biosynthesis-associated prot	97.82
PRK02797		322	4-alpha-L-fucosyltransferase; Provisional	97.73
cd03784		401	GT1_Gtf_like This family includes the Gtfs, a grou	97.62
PF02684		373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	97.61
PF07429		360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	97.51
COG3914		620	Spy Predicted O-linked N-acetylglucosamine transfe	97.47
COG0763		381	LpxB Lipid A disaccharide synthetase [Cell envelop	97.43
PF02350		346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	97.38
PF04101		167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	97.35
PRK01021		608	lpxB lipid-A-disaccharide synthase; Reviewed	97.32
COG0381		383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	97.21
PF04464		369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	97.11
PHA03392		507	egt ecdysteroid UDP-glucosyltransferase; Provision	96.94
PF13528		318	Glyco_trans_1_3: Glycosyl transferase family 1	96.9
TIGR00661		321	MJ1255 conserved hypothetical protein. This model	96.84
COG1819		406	Glycosyl transferases, related to UDP-glucuronosyl	96.61
PF04007		335	DUF354: Protein of unknown function (DUF354); Inte	96.25
COG0058		750	GlgP Glucan phosphorylase [Carbohydrate transport	96.18
PF00201		500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	95.87
PRK10017		426	colanic acid biosynthesis protein; Provisional	95.86
KOG3742		692	consensus Glycogen synthase [Carbohydrate transpor	95.65
PF06258		311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	95.44
PLN02562		448	UDP-glycosyltransferase	95.4
PRK14986		815	glycogen phosphorylase; Provisional	95.4
PLN03007		482	UDP-glucosyltransferase family protein	94.91
TIGR02093		794	P_ylase glycogen/starch/alpha-glucan phosphorylase	94.75
PLN02448		459	UDP-glycosyltransferase family protein	94.73
COG4641		373	Uncharacterized protein conserved in bacteria [Fun	94.71
PLN03004		451	UDP-glycosyltransferase	94.68
cd04300		797	GT1_Glycogen_Phosphorylase This is a family of oli	94.67
PLN02410		451	UDP-glucoronosyl/UDP-glucosyl transferase family p	94.54
PLN02670		472	transferase, transferring glycosyl groups	94.44
PLN02863		477	UDP-glucoronosyl/UDP-glucosyl transferase family p	94.37
PRK14985		798	maltodextrin phosphorylase; Provisional	94.35
PLN02210		456	UDP-glucosyl transferase	94.35
PLN02167		475	UDP-glycosyltransferase family protein	94.32
PF00343		713	Phosphorylase: Carbohydrate phosphorylase; InterPr	94.0
PRK14089		347	ipid-A-disaccharide synthase; Provisional	93.97
COG4671		400	Predicted glycosyl transferase [General function p	93.33
PLN02173		449	UDP-glucosyl transferase family protein	93.27
COG3980		318	spsG Spore coat polysaccharide biosynthesis protei	93.16
PLN02554		481	UDP-glycosyltransferase family protein	93.09
PF13439		177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	92.74
COG1817		346	Uncharacterized protein conserved in archaea [Func	92.67
PLN02152		455	indole-3-acetate beta-glucosyltransferase	91.85
COG3660		329	Predicted nucleoside-diphosphate-sugar epimerase [	91.74
PLN02555		480	limonoid glucosyltransferase	89.96
PLN02764		453	glycosyltransferase family protein	89.76
PF05159		269	Capsule_synth: Capsule polysaccharide biosynthesis	89.48
PLN02534		491	UDP-glycosyltransferase	89.46
PLN02208		442	glycosyltransferase family protein	89.41
PF13579		160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	88.97
TIGR02195		334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	88.15
cd03789		279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	87.91
PF15024		559	Glyco_transf_18: Glycosyltransferase family 18	87.13
PLN00164		480	glucosyltransferase; Provisional	86.96
PF10087		97	DUF2325: Uncharacterized protein conserved in bact	86.79
PLN02992		481	coniferyl-alcohol glucosyltransferase	86.45
PLN02207		468	UDP-glycosyltransferase	85.68
KOG1192		496	consensus UDP-glucuronosyl and UDP-glucosyl transf	85.41
KOG1050		732	consensus Trehalose-6-phosphate synthase component	84.79
PRK10422		352	lipopolysaccharide core biosynthesis protein; Prov	84.57
PLN00414		446	glycosyltransferase family protein	83.29
KOG4626		966	consensus O-linked N-acetylglucosamine transferase	83.1
PF01075		247	Glyco_transf_9: Glycosyltransferase family 9 (hept	82.47
KOG3349		170	consensus Predicted glycosyltransferase [General f	81.29
PF03016		302	Exostosin: Exostosin family; InterPro: IPR004263 H	81.12
TIGR02201		344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	80.98
PRK10916		348	ADP-heptose:LPS heptosyltransferase II; Provisiona	80.75
TIGR02193		319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	80.5

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase	Back alignment and domain information

Probab=99.96  E-value=4.5e-27  Score=258.64  Aligned_cols=272  Identities=18%  Similarity=0.195  Sum_probs=210.6

Q ss_pred             CCCCEEEEEccchhhhhhhhhhhhhHHHHHHHH--HHHHhccCEEEecCCch-HHH--hhCCCCCCEEEeCCCCCCchhh
Q 003758            6 HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYW--KSVFSRVNVIVFPDYTL-PML--YSVLDAGNFFVIPGSPADVWAV   80 (797)
Q Consensus         6 ~~IPVIW~IHE~sL~~rL~~y~~~g~eklls~~--~~~~~~AD~VV~ps~~l-~~i--~~gld~~ki~VIPnsGVDvw~a   80 (797)
                      .++|+|.++|+.....................+  ...+..+|.|++.+... ..+  ..+.+.+++.+||| |||.   
T Consensus       123 ~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~n-gvd~---  198 (405)
T TIGR03449       123 WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAP-GADL---  198 (405)
T ss_pred             cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECC-CcCH---
Confidence            468999999974321110000000000111111  34678999999887543 222  34677789999998 9998   


Q ss_pred             hhcccchhHHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCC--C-C
Q 003758           81 EAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNST--D-G  157 (797)
Q Consensus        81 e~F~~s~~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~--~-~  157 (797)
                      +.|.+. .....+.+++++.++++|+++|++...    ||++.+++|+..+....+     ..+++| +++|...  . .
T Consensus       199 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~l~~~----K~~~~li~a~~~l~~~~~-----~~~~~l-~ivG~~~~~g~~  267 (405)
T TIGR03449       199 ERFRPG-DRATERARLGLPLDTKVVAFVGRIQPL----KAPDVLLRAVAELLDRDP-----DRNLRV-IVVGGPSGSGLA  267 (405)
T ss_pred             HHcCCC-cHHHHHHhcCCCCCCcEEEEecCCCcc----cCHHHHHHHHHHHHhhCC-----CcceEE-EEEeCCCCCcch
Confidence            666544 345677889998888999999998877    566999999998853221     123885 6777532  1 2


Q ss_pred             CHHHHHHHHHHcCCCCCeEEEec--ChhhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcC
Q 003758          158 YNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG  235 (797)
Q Consensus       158 Y~e~Leela~elgL~d~~V~flG--~~edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg  235 (797)
                      +.+.++++++++++.+ +|+|+|  +.+++..+|+.||++|+||..|  |||++++|||++|+|||+++.++++|++.++
T Consensus       268 ~~~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E--~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~  344 (405)
T TIGR03449       268 TPDALIELAAELGIAD-RVRFLPPRPPEELVHVYRAADVVAVPSYNE--SFGLVAMEAQACGTPVVAARVGGLPVAVADG  344 (405)
T ss_pred             HHHHHHHHHHHcCCCc-eEEECCCCCHHHHHHHHHhCCEEEECCCCC--CcChHHHHHHHcCCCEEEecCCCcHhhhccC
Confidence            3478889999999987 899999  4688999999999999999998  9999999999999999999999999999999


Q ss_pred             CeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Q 003758          236 AQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN  298 (797)
Q Consensus       236 ~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~  298 (797)
                      .+|++++++|+++++++|.+++++++.   +.++++++++.++++.+...+++|.++|.+++.
T Consensus       345 ~~g~~~~~~d~~~la~~i~~~l~~~~~---~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~  404 (405)
T TIGR03449       345 ETGLLVDGHDPADWADALARLLDDPRT---RIRMGAAAVEHAAGFSWAATADGLLSSYRDALA  404 (405)
T ss_pred             CceEECCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999998876   789999999998877777778999999998763

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional	Back alignment and domain information

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain	Back alignment and domain information

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family	Back alignment and domain information

>PRK10307 putative glycosyl transferase; Provisional	Back alignment and domain information

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	Back alignment and domain information

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional	Back alignment and domain information

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant	Back alignment and domain information

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>PRK00654 glgA glycogen synthase; Provisional	Back alignment and domain information

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK14099 glycogen synthase; Provisional	Back alignment and domain information

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose	Back alignment and domain information

>PLN02939 transferase, transferring glycosyl groups	Back alignment and domain information

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional	Back alignment and domain information

>TIGR02918 accessory Sec system glycosylation protein GtfA	Back alignment and domain information

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK14098 glycogen synthase; Provisional	Back alignment and domain information

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type	Back alignment and domain information

>PLN02316 synthase/transferase	Back alignment and domain information

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional	Back alignment and domain information

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli	Back alignment and domain information

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR02470 sucr_synth sucrose synthase	Back alignment and domain information

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding	Back alignment and domain information

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria	Back alignment and domain information

>PRK10125 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN00142 sucrose synthase	Back alignment and domain information

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional	Back alignment and domain information

>PHA01630 putative group 1 glycosyl transferase	Back alignment and domain information

>PLN02949 transferase, transferring glycosyl groups	Back alignment and domain information

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PLN02501 digalactosyldiacylglycerol synthase	Back alignment and domain information

>PLN02846 digalactosyldiacylglycerol synthase	Back alignment and domain information

>PHA01633 putative glycosyl transferase group 1	Back alignment and domain information

>PLN02275 transferase, transferring glycosyl groups	Back alignment and domain information

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed	Back alignment and domain information

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis	Back alignment and domain information

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor	Back alignment and domain information

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]	Back alignment and domain information

>PLN02605 monogalactosyldiacylglycerol synthase	Back alignment and domain information

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]	Back alignment and domain information

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>PRK13609 diacylglycerol glucosyltransferase; Provisional	Back alignment and domain information

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis	Back alignment and domain information

>PRK13608 diacylglycerol glucosyltransferase; Provisional	Back alignment and domain information

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional	Back alignment and domain information

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional	Back alignment and domain information

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	Back alignment and domain information

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional	Back alignment and domain information

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed	Back alignment and domain information

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional	Back alignment and domain information

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase	Back alignment and domain information

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase	Back alignment and domain information

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A	Back alignment and domain information

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)	Back alignment and domain information

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1	Back alignment and domain information

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional	Back alignment and domain information

>TIGR00215 lpxB lipid-A-disaccharide synthase	Back alignment and domain information

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1	Back alignment and domain information

>TIGR02919 accessory Sec system glycosyltransferase GtfB	Back alignment and domain information

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>TIGR02094 more_P_ylases alpha-glucan phosphorylases	Back alignment and domain information

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3	Back alignment and domain information

>PRK10117 trehalose-6-phosphate synthase; Provisional	Back alignment and domain information

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>TIGR03492 conserved hypothetical protein	Back alignment and domain information

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences	Back alignment and domain information

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed	Back alignment and domain information

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing	Back alignment and domain information

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]	Back alignment and domain information

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A	Back alignment and domain information

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01426 MGT glycosyltransferase, MGT family	Back alignment and domain information

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG	Back alignment and domain information

>PRK02797 4-alpha-L-fucosyltransferase; Provisional	Back alignment and domain information

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin	Back alignment and domain information

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)	Back alignment and domain information

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5	Back alignment and domain information

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed	Back alignment and domain information

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria	Back alignment and domain information

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional	Back alignment and domain information

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1	Back alignment and domain information

>TIGR00661 MJ1255 conserved hypothetical protein	Back alignment and domain information

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	Back alignment and domain information

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length	Back alignment and domain information

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule	Back alignment and domain information

>PRK10017 colanic acid biosynthesis protein; Provisional	Back alignment and domain information

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins	Back alignment and domain information

>PLN02562 UDP-glycosyltransferase	Back alignment and domain information

>PRK14986 glycogen phosphorylase; Provisional	Back alignment and domain information

>PLN03007 UDP-glucosyltransferase family protein	Back alignment and domain information

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases	Back alignment and domain information

>PLN02448 UDP-glycosyltransferase family protein	Back alignment and domain information

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PLN03004 UDP-glycosyltransferase	Back alignment and domain information

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases	Back alignment and domain information

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein	Back alignment and domain information

>PLN02670 transferase, transferring glycosyl groups	Back alignment and domain information

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein	Back alignment and domain information

>PRK14985 maltodextrin phosphorylase; Provisional	Back alignment and domain information

>PLN02210 UDP-glucosyl transferase	Back alignment and domain information

>PLN02167 UDP-glycosyltransferase family protein	Back alignment and domain information

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PRK14089 ipid-A-disaccharide synthase; Provisional	Back alignment and domain information

>COG4671 Predicted glycosyl transferase [General function prediction only]	Back alignment and domain information

>PLN02173 UDP-glucosyl transferase family protein	Back alignment and domain information

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PLN02554 UDP-glycosyltransferase family protein	Back alignment and domain information

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A	Back alignment and domain information

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]	Back alignment and domain information

>PLN02152 indole-3-acetate beta-glucosyltransferase	Back alignment and domain information

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PLN02555 limonoid glucosyltransferase	Back alignment and domain information

>PLN02764 glycosyltransferase family protein	Back alignment and domain information

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT	Back alignment and domain information

>PLN02534 UDP-glycosyltransferase	Back alignment and domain information

>PLN02208 glycosyltransferase family protein	Back alignment and domain information

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A	Back alignment and domain information

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II	Back alignment and domain information

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)	Back alignment and domain information

>PF15024 Glyco_transf_18: Glycosyltransferase family 18	Back alignment and domain information

>PLN00164 glucosyltransferase; Provisional	Back alignment and domain information

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function	Back alignment and domain information

>PLN02992 coniferyl-alcohol glucosyltransferase	Back alignment and domain information

>PLN02207 UDP-glycosyltransferase	Back alignment and domain information

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]	Back alignment and domain information

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional	Back alignment and domain information

>PLN00414 glycosyltransferase family protein	Back alignment and domain information

>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]	Back alignment and domain information

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]	Back alignment and domain information

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []	Back alignment and domain information

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative	Back alignment and domain information

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional	Back alignment and domain information

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		797
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-09
2jjm_A		394	Glycosyl transferase, group 1 family protein; anth	5e-11
2iw1_A		374	Lipopolysaccharide core biosynthesis protein RFAG;	1e-09
3qhp_A		166	Type 1 capsular polysaccharide biosynthesis prote	2e-06
2x6q_A		416	Trehalose-synthase TRET; biosynthetic protein; 2.2	6e-06
3okp_A		394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	8e-05
2x0d_A		413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 76.8 bits (188), Expect = 2e-14
 Identities = 87/659 (13%), Positives = 183/659 (27%), Gaps = 196/659 (29%)

Query: 13  IIQEDSLANRLPVYVERGFQNLLSYWKSVFSR-VNVIVFPDYTLPMLYS---------VL 62
           II      +       R F  LLS  + +  + V  ++  +Y    L S          +
Sbjct: 54  IIMSKDAVSG----TLRLFWTLLSKQEEMVQKFVEEVLRINY--KFLMSPIKTEQRQPSM 107

Query: 63  DAGNFF---------VIPGSPADVWAVEAYSKSHEK-YQLRKEN--------GFLKDEIV 104
               +              +  +V  ++ Y K  +   +LR           G  K  + 
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVA 167

Query: 105 VVVVGS----SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVF-LCGNSTDGYN 159
           + V  S         ++ W             +     NS E   + +  L       + 
Sbjct: 168 LDVCLSYKVQCKMDFKIFW-------------LNLKNCNSPETVLEMLQKLLYQIDPNWT 214

Query: 160 ---DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTF 216
              D    +  R+  ++  +R    +      LL+   V                 A   
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK----------AWNAFNL 264

Query: 217 G--IPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSR--AFSLF-----ISNGKLSKFAR 267
              I + T    +  ++++           +   L+     SL           L +   
Sbjct: 265 SCKILLTTRFKQVT-DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323

Query: 268 T-----VASAGRL------HAKNMLALDCVTRYARILENVLNFPSDALLPGPISQLQQVS 316
           T     ++              N   ++C  +   I+E+ LN     L P   ++ +++ 
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKHVNC-DKLTTIIESSLN----VLEP---AEYRKMF 375

Query: 317 WEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEFTKNITENENRSADQDTIS 376
              ++F     +    +L++  W     S    VV+ L      ++ E   +   + TIS
Sbjct: 376 DRLSVFPPSAHI-PTILLSL-IWFDVIKSDVMVVVNKLH---KYSLVE---KQPKESTIS 427

Query: 377 ELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKSERFKFEANERDEGEL 436
                 +  I    + +      L   +        D Y   +  +         D+   
Sbjct: 428 ------IPSIYLELKVKLENEYALHRSIV-------DHYNIPKTFDSDDLIPPYLDQ--- 471

Query: 437 ERTGQPVCIYEIYSGSGAWPFL-HHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHY 495
                    Y  YS       + HH        L +       + +     +    +  +
Sbjct: 472 ---------Y-FYS------HIGHH--------LKNIEH---PERMTLFRMV----FLDF 500

Query: 496 RDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVLEETVQETEGDVM 555
           R         F +  K+                  R  S + +A   +  T+Q     + 
Sbjct: 501 R---------F-LEQKI------------------RHDSTAWNASGSILNTLQ----QLK 528

Query: 556 YFWAHL-DMDGGFTRNNNDVLTFWSMC--DILNGGHCR-----------TAFEDAFRQM 600
           ++  ++ D D  + R  N +L F      +++   +               FE+A +Q+
Sbjct: 529 FYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQV 587

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394	Back alignment and structure

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374	Back alignment and structure

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166	Back alignment and structure

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416	Back alignment and structure

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394	Back alignment and structure

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		797
3c48_A		438	Predicted glycosyltransferases; retaining glycosyl	99.96
3fro_A		439	GLGA glycogen synthase; glycosyltransferase family	99.96
2jjm_A		394	Glycosyl transferase, group 1 family protein; anth	99.96
3okp_A		394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	99.96
2x6q_A		416	Trehalose-synthase TRET; biosynthetic protein; 2.2	99.96
2r60_A		499	Glycosyl transferase, group 1; rossmann-fold; 1.80	99.95
1rzu_A		485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	99.95
2iw1_A		374	Lipopolysaccharide core biosynthesis protein RFAG;	99.95
2qzs_A		485	Glycogen synthase; glycosyl-transferase, GT-B fold	99.95
3oy2_A		413	Glycosyltransferase B736L; rossmann fold, GDP-mann	99.94
2gek_A		406	Phosphatidylinositol mannosyltransferase (PIMA); G	99.93
3vue_A		536	GBSS-I, granule-bound starch synthase 1, chloropla	99.93
3s28_A		816	Sucrose synthase 1; glycosyltransferase, sucrose m	99.93
2iuy_A		342	Avigt4, glycosyltransferase; antibiotics, family G	99.91
2bfw_A		200	GLGA glycogen synthase; glycosyltransferase family	99.91
3qhp_A		166	Type 1 capsular polysaccharide biosynthesis prote	99.87
1uqt_A		482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.86
3nb0_A		725	Glycogen [starch] synthase isoform 2; glycogen syn	99.86
2x0d_A		413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	99.86
2f9f_A		177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.85
2hy7_A		406	Glucuronosyltransferase GUMK; glycosyltransferases	99.84
1f0k_A		364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.83
3beo_A		375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	99.82
1vgv_A		384	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.82
2vsy_A		568	XCC0866; transferase, glycosyl transferase, GT-B,	99.8
3t5t_A		496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.78
2xci_A		374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.77
1v4v_A		376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.67
3rhz_A		339	GTF3, nucleotide sugar synthetase-like protein; gl	99.53
3dzc_A		396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.51
3ot5_A		403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.44
3s2u_A		365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.25
3otg_A		412	CALG1; calicheamicin, TDP, structural genomics, PS	99.24
4hwg_A		385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.19
2iyf_A		430	OLED, oleandomycin glycosyltransferase; antibiotic	99.16
4fzr_A		398	SSFS6; structural genomics, PSI-biology, protein s	99.0
3tsa_A		391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	98.96
2o6l_A		170	UDP-glucuronosyltransferase 2B7; drug metabolism,	98.9
3ia7_A		402	CALG4; glycosysltransferase, calicheamicin, enediy	98.86
3q3e_A		631	HMW1C-like glycosyltransferase; N-glycosylation; 2	98.84
2p6p_A		384	Glycosyl transferase; X-RAY-diffraction,urdamycina	98.82
3oti_A		398	CALG3; calicheamicin, TDP, structural genomics, PS	98.81
3rsc_A		415	CALG2; TDP, enediyne, structural genomics, PSI-2,	98.8
2yjn_A		441	ERYCIII, glycosyltransferase; transferase, cytochr	98.71
2iya_A		424	OLEI, oleandomycin glycosyltransferase; carbohydra	98.59
1iir_A		415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	98.32
1l5w_A		796	Maltodextrin phosphorylase; enzymatic catalysis, s	98.18
1rrv_A		416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	98.11
2c4m_A		796	Glycogen phosphorylase; allosteric control, phosph	98.05
2gj4_A		824	Glycogen phosphorylase, muscle form; transferase;	97.99
4amg_A		400	Snogd; transferase, polyketide biosynthesis, GT1 f	97.98
3h4t_A		404	Glycosyltransferase GTFA, glycosyltransferase; van	97.96
4gyw_A		723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	97.95
3hbm_A		282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	97.05
2c1x_A		456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	96.97
3hbf_A		454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	96.93
2pq6_A		482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	96.89
2acv_A		463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	96.78
2vch_A		480	Hydroquinone glucosyltransferase; glycosyltransfer	96.53
2jzc_A		224	UDP-N-acetylglucosamine transferase subunit ALG13;	95.96
3l7i_A		729	Teichoic acid biosynthesis protein F; GT-B fold, m	95.94
1psw_A		348	ADP-heptose LPS heptosyltransferase II; structural	94.45
1ygp_A		879	Yeast glycogen phosphorylase; phosphorylated form,	94.25
3tov_A		349	Glycosyl transferase family 9; structural genomics	90.98
2gt1_A		326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	87.03
1k68_A		140	Phytochrome response regulator RCPA; phosphorylate	86.02
3heb_A		152	Response regulator receiver domain protein (CHEY);	85.52
3kht_A		144	Response regulator; PSI-II, 11023K, structural gen	85.52
2zay_A		147	Response regulator receiver protein; structural ge	85.37
3jte_A		143	Response regulator receiver protein; structural ge	83.4
3ilh_A		146	Two component response regulator; NYSGXRC, PSI-II,	83.22
3h1g_A		129	Chemotaxis protein CHEY homolog; sulfate-bound CHE	82.88
1k66_A		149	Phytochrome response regulator RCPB; CHEY homologu	82.58
3cnb_A		143	DNA-binding response regulator, MERR family; signa	82.35
3cg4_A		142	Response regulator receiver domain protein (CHEY-;	81.47
2pln_A		137	HP1043, response regulator; signaling protein; 1.8	81.12
3hzh_A		157	Chemotaxis response regulator (CHEY-3); phosphatas	81.06
1jbe_A		128	Chemotaxis protein CHEY; signaling protein; 1.08A	80.85
1qkk_A		155	DCTD, C4-dicarboxylate transport transcriptional r	80.69
3h5i_A		140	Response regulator/sensory box protein/ggdef domai	80.25

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*	Back alignment and structure

Probab=99.96  E-value=5.1e-28  Score=263.99  Aligned_cols=272  Identities=18%  Similarity=0.212  Sum_probs=214.0

Q ss_pred             CCCEEEEEccchhhhhhhhhhhhhH-H-HHHHHHHHHHhccCEEEecCCchHHH---hhCCCCCCEEEeCCCCCCchhhh
Q 003758            7 SIPLVWIIQEDSLANRLPVYVERGF-Q-NLLSYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVE   81 (797)
Q Consensus         7 ~IPVIW~IHE~sL~~rL~~y~~~g~-e-klls~~~~~~~~AD~VV~ps~~l~~i---~~gld~~ki~VIPnsGVDvw~ae   81 (797)
                      ++|+|+++|+............... . .........++.+|.|++.+......   ..|++..++.+||+ |+|.   .
T Consensus       145 ~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~n-gvd~---~  220 (438)
T 3c48_A          145 RIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSP-GADV---E  220 (438)
T ss_dssp             TCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCC-CCCT---T
T ss_pred             CCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecC-Cccc---c
Confidence            6899999998643221100000000 0 01112244788999999988655443   25788889999998 9997   6


Q ss_pred             hcccch--hHHHHHHHcCCCCCCEEEEEEccccccccccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeC----CC
Q 003758           82 AYSKSH--EKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN----ST  155 (797)
Q Consensus        82 ~F~~s~--~k~slR~klGL~~d~~vIL~VGrl~~~KGl~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~----g~  155 (797)
                      .|.+..  ....++++++++.+.++|+++|++...    ||++.+++|+..+....+     ..+++ ++|+|.    |+
T Consensus       221 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~----Kg~~~li~a~~~l~~~~p-----~~~~~-l~i~G~~~~~g~  290 (438)
T 3c48_A          221 LYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPF----KGPQVLIKAVAALFDRDP-----DRNLR-VIICGGPSGPNA  290 (438)
T ss_dssp             TSCCC----CHHHHHHTTCCSSSEEEEEESCBSGG----GCHHHHHHHHHHHHHHCT-----TCSEE-EEEECCBC----
T ss_pred             ccCCcccchhhhhHHhcCCCCCCcEEEEEeeeccc----CCHHHHHHHHHHHHhhCC-----CcceE-EEEEeCCCCCCc
Confidence            665432  123488899999999999999998766    677999999998853221     13788 588898    55


Q ss_pred             CCCHHHHHHHHHHcCCCCCeEEEecCh--hhHHHHHHHcCEEEEccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhh
Q 003758          156 DGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA  233 (797)
Q Consensus       156 ~~Y~e~Leela~elgL~d~~V~flG~~--edl~~~L~aADV~V~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~  233 (797)
                      ..  +.++++++++++.+ +|+++|..  +++..+|+.||++|+||..|  |||++++|||+||+|||+++.+++++++.
T Consensus       291 ~~--~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~Eama~G~PvI~~~~~~~~e~i~  365 (438)
T 3c48_A          291 TP--DTYRHMAEELGVEK-RIRFLDPRPPSELVAVYRAADIVAVPSFNE--SFGLVAMEAQASGTPVIAARVGGLPIAVA  365 (438)
T ss_dssp             ----CHHHHHHHHTTCTT-TEEEECCCCHHHHHHHHHHCSEEEECCSCC--SSCHHHHHHHHTTCCEEEESCTTHHHHSC
T ss_pred             HH--HHHHHHHHHcCCCC-cEEEcCCCChHHHHHHHHhCCEEEECcccc--CCchHHHHHHHcCCCEEecCCCChhHHhh
Confidence            44  88999999999987 89999954  88999999999999999998  99999999999999999999999999999


Q ss_pred             cCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC
Q 003758          234 EGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP  300 (797)
Q Consensus       234 Dg~nG~Lfd~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk~ak~~~s~e~i~~Y~kLLe~lL~~p  300 (797)
                      ++.+|++++++|+++|+++|..++++++.   +.++++++++.+.++.+...++.|.++|+++++.+
T Consensus       366 ~~~~g~~~~~~d~~~la~~i~~l~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  429 (438)
T 3c48_A          366 EGETGLLVDGHSPHAWADALATLLDDDET---RIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE  429 (438)
T ss_dssp             BTTTEEEESSCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCCcEEECCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999987   88999999999999555555889999999999854

PyMOL of 3c48

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*	Back alignment and structure

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*	Back alignment and structure

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*	Back alignment and structure

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*	Back alignment and structure

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*	Back alignment and structure

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A	Back alignment and structure

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*	Back alignment and structure

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A	Back alignment and structure

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*	Back alignment and structure

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*	Back alignment and structure

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*	Back alignment and structure

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*	Back alignment and structure

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*	Back alignment and structure

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8	Back alignment and structure

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}	Back alignment and structure

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*	Back alignment and structure

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*	Back alignment and structure

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*	Back alignment and structure

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8	Back alignment and structure

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*	Back alignment and structure

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*	Back alignment and structure

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A	Back alignment and structure

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*	Back alignment and structure

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*	Back alignment and structure

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*	Back alignment and structure

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*	Back alignment and structure

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3	Back alignment and structure

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*	Back alignment and structure

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}	Back alignment and structure

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}	Back alignment and structure

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}	Back alignment and structure

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*	Back alignment and structure

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}	Back alignment and structure

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}	Back alignment and structure

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*	Back alignment and structure

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*	Back alignment and structure

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}	Back alignment and structure

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}	Back alignment and structure

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A	Back alignment and structure

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}	Back alignment and structure

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*	Back alignment and structure

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*	Back alignment and structure

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}	Back alignment and structure

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}	Back alignment and structure

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5	Back alignment and structure

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*	Back alignment and structure

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5	Back alignment and structure

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}	Back alignment and structure

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...	Back alignment and structure

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*	Back alignment and structure

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*	Back alignment and structure

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*	Back alignment and structure

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*	Back alignment and structure

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*	Back alignment and structure

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*	Back alignment and structure

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10	Back alignment and structure

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*	Back alignment and structure

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*	Back alignment and structure

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A	Back alignment and structure

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*	Back alignment and structure

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7	Back alignment and structure

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}	Back alignment and structure

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*	Back alignment and structure

>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1	Back alignment and structure

>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0	Back alignment and structure

>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0	Back alignment and structure

>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}	Back alignment and structure

>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}	Back alignment and structure

>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}	Back alignment and structure

>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A	Back alignment and structure

>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1	Back alignment and structure

>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}	Back alignment and structure

>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}	Back alignment and structure

>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A	Back alignment and structure

>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}	Back alignment and structure

>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...	Back alignment and structure

>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A	Back alignment and structure

>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		797
d2bisa1		437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	3e-04
d1rzua_		477	c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte	8e-04
d2iw1a1		370	c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt	0.004

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 41.7 bits (96), Expect = 3e-04
 Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 3/102 (2%)

Query: 204 QGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLS 263
           + F  + + AM  G   I      +++ +      I  +  +P  L+ A    +   +  
Sbjct: 339 EPFGLVALEAMCLGAIPIASAVGGLRDIITNETG-ILVKAGDPGELANAILKALELSR-- 395

Query: 264 KFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALL 305
                     +  A +        RY +     ++   D +L
Sbjct: 396 SDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFDFIL 437

PyMOL of d2bisa1

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477	Back information, alignment and structure

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		797
d2iw1a1		370	Lipopolysaccharide core biosynthesis protein RfaG	99.95
d2bisa1		437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.93
d1rzua_		477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	99.92
d2bfwa1		196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.88
d2f9fa1		166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.82
d1uqta_		456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.73
d1f0ka_		351	Peptidoglycan biosynthesis glycosyltransferase Mur	97.97
d1v4va_		373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	97.59
d1iira_		401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	97.54
d1rrva_		401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	97.53
d1pn3a_		391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	97.48
d2acva1		461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	96.8
d2gj4a1		824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	96.51
d1o6ca_		377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	96.43
d1l5wa_		796	Maltodextrin phosphorylase (MALP) {Escherichia col	96.34
d1f6da_		376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	96.32
d2pq6a1		473	(Iso)flavonoid glycosyltransferase {Medicago trunc	95.72
d2vcha1		471	Hydroquinone glucosyltransferase {Thale cress (Ara	94.84
d2c1xa1		450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	93.67
d1ygpa_		876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	92.59
d1pswa_		348	ADP-heptose LPS heptosyltransferase II {Escherichi	88.09
d1i3ca_		144	Response regulator for cyanobacterial phytochrome	81.38

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=3.2e-27  Score=243.90  Aligned_cols=228  Identities=16%  Similarity=0.195  Sum_probs=187.0

Q ss_pred             hccCEEEecCCch-HHH--hhCCCCCCEEEeCCCCCCchhhhhccc---chhHHHHHHHcCCCCCCEEEEEEcccccccc
Q 003758           43 SRVNVIVFPDYTL-PML--YSVLDAGNFFVIPGSPADVWAVEAYSK---SHEKYQLRKENGFLKDEIVVVVVGSSFFYNE  116 (797)
Q Consensus        43 ~~AD~VV~ps~~l-~~i--~~gld~~ki~VIPnsGVDvw~ae~F~~---s~~k~slR~klGL~~d~~vIL~VGrl~~~KG  116 (797)
                      ..++.+++..... ..+  ..+.+.+++.+||+ |||.   +.+..   +..+...+..+|++.+.++|+++|++...  
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~-gv~~---~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~--  207 (370)
T d2iw1a1         134 GKSTKLMMLTDKQIADFQKHYQTEPERFQILPP-GIYP---DRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGR--  207 (370)
T ss_dssp             TCCCEEEESCHHHHHHHHHHHCCCGGGEEECCC-CCCG---GGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTT--
T ss_pred             ccCceEEEecHHHHHHHHHhcCCCcceEEEEEe-eccc---ccccccCchhhhhhhhhccCCCccceEEEEEeccccc--
Confidence            3456666665432 222  45788889999998 9987   43322   24567788999999999999999998887  


Q ss_pred             ccccHHHHHHHHHHHHHHHhhhccCCCCcEEEEEEeCCCCCCHHHHHHHHHHcCCCCCeEEEecChhhHHHHHHHcCEEE
Q 003758          117 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVL  196 (797)
Q Consensus       117 l~Kn~~lLLkAl~~Ll~e~~~lk~~~pdvkfLIIvG~g~~~Y~e~Leela~elgL~d~~V~flG~~edl~~~L~aADV~V  196 (797)
                        ||++.+++|+..|....       ++..+ +++|.+...  ..+++++++++..+ +|++.|+.+++.++|+.||++|
T Consensus       208 --Kg~~~li~a~~~l~~~~-------~~~~~-~ii~g~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adv~v  274 (370)
T d2iw1a1         208 --KGVDRSIEALASLPESL-------RHNTL-LFVVGQDKP--RKFEALAEKLGVRS-NVHFFSGRNDVSELMAAADLLL  274 (370)
T ss_dssp             --TTHHHHHHHHHTSCHHH-------HHTEE-EEEESSSCC--HHHHHHHHHHTCGG-GEEEESCCSCHHHHHHHCSEEE
T ss_pred             --cchhhhccccccccccc-------cccee-eeccccccc--cccccccccccccc-cccccccccccccccccccccc
Confidence              56699999998885443       33443 444444444  78899999999988 9999999899999999999999


Q ss_pred             EccCCCCCCccHHHHHHHHhCCcEEEcCCCChhHhhhcCCeEEEE-cCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Q 003758          197 YGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFF-QKDNPEGLSRAFSLFISNGKLSKFARTVASAGRL  275 (797)
Q Consensus       197 ~PS~~Ee~GFPlvLLEAMA~G~PVIasd~gGi~EiI~Dg~nG~Lf-d~~D~eeLAeaI~~LLedpel~~~r~~m~~~aRk  275 (797)
                      +||..|  |||++++|||+||+|||+++.+|++|++.++.+|+++ +++|+++|+++|.++++|+++   +++|+++|++
T Consensus       275 ~ps~~E--~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~---~~~~~~~ar~  349 (370)
T d2iw1a1         275 HPAYQE--AAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPL---RMAWAENARH  349 (370)
T ss_dssp             ECCSCC--SSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHH---HHHHHHHHHH
T ss_pred             cccccc--cccceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHH
Confidence            999998  9999999999999999999999999999999999766 678999999999999999987   8999999999


Q ss_pred             HHHHhcHHHHHHHHHHHHH
Q 003758          276 HAKNMLALDCVTRYARILE  294 (797)
Q Consensus       276 ~ak~~~s~e~i~~Y~kLLe  294 (797)
                      +++++......+.+.++|+
T Consensus       350 ~~~~~~~~~~~~~~~~ii~  368 (370)
T d2iw1a1         350 YADTQDLYSLPEKAADIIT  368 (370)
T ss_dssp             HHHHSCCSCHHHHHHHHHH
T ss_pred             HHHHhChhHHHHHHHHHHh
Confidence            9988755555667777764

PyMOL of d2iw1a1

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}	Back information, alignment and structure

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}	Back information, alignment and structure

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}	Back information, alignment and structure

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}	Back information, alignment and structure

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}	Back information, alignment and structure