Citrus Sinensis ID: 003864

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790

MEELFDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLELVRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVCFEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAKVADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQESTGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGELLSCGFTLSEVQCNLFSRYFCWVLNSCYVLGLSVLEISFHSTFKTVDEFCFRDLIPYAIICIFFFFIN

cHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccEEEEEEEEEcccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccccEEcccccccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHcccccHHHHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccEEEEEEccccccHHHHHHccccHHHHHHHHHHccc

cHHHHccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEcccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHccccccccccccccHcccccEEEcHcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccHHHEEEEccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccEccccHHHHHHHHHHHHHHHcHHHHHHHHccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHcc

MEELFDTINVRdllsthdltdqtapltapDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLELVRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLrvgdenaseplVYGLLRKEWLVCFEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAKVADLKIKYVispavsygspitfveelnpgpekMSEAILRMVpsvddkienvdgktiySGIIQVVKFIHKRIclqngswvrcfgrltwpRISELIISNFlskvvpedasklADFQKIIDHTSEFEAALKEMMFIsasdnkdarlSNFAENVEVHFASRKKTEILAKARNLLLQcdfavpqestgkdpickndgmavdsseHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFeyhsdfpssikehAVFADMAPRFHLMAEEILQRQIQIVIFNLRealdgadgfqnthQIQQFESAKFSIEQVVFILEKVHIiweplllpstynrsMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQkgktegdfarplddlipSLCKFRKLAELLDMPLRSITAAWESGELLSCGFTLSEVQCNLFSRYFCWVLNSCYVLGLSVLEISFHSTFKTVDEFCFRDLIPYAIICIFFFFIN

MEELFDTINVRdllsthdltdqtaplTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTdeistdlsdilglisyrpidkeVKEIIDEVSAKMKEARVKKELLELVRAIVeigerlkgvkealrdgrLRFAAEELRElkkdlrvgdenaseplVYGLLRKEWLVCFEEIQELLVKFVESAVRfekesnrvlvkyqltvdgldGIELRTVLEAMEVVGILDYGLAKVADLKIKYVIspavsygspITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQESTGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGktegdfarplddLIPSLCKFRKLAELLDMPLRSITAAWESGELLSCGFTLSEVQCNLFSRYFCWVLNSCYVLGLSVLEISFHSTFKTVDEFCFRDLIPYAIICIFFFFIN

MEELFDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLELVRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVCFEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAKVADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQESTGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHlmlenlsslleslAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGELLSCGFTLSEVQCNLFSRYFCWVLNSCYVLGLSVLEISFHSTFKTVDEFCFRDLIPYAIICIFFFFIN

****FDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLELVRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGD*NASEPLVYGLLRKEWLVCFEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAKVADLKIKYVISPAVSYGSPITFVEEL*********AILRMVPSVDDKIENVDGKTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISA******RLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQ******PICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGELLSCGFTLSEVQCNLFSRYFCWVLNSCYVLGLSVLEISFHSTFKTVDEFCFRDLIPYAIICIFFFFI*

**ELFDTINVRDL******************RLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLC*********************************IDEVSAKMKEARVKKELLELVRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVCFEEIQELLVKFVESAVRFEKESNR**************IELRTVLEAMEVVGILDYGLAKVADLKIKYVISPAVSYGSPITFVEEL*****************************IYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDF****************************LLFMSERCVVTKAASQLMKLVHQILQD**********EFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQN*******ESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLE***************ARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGELLSCGFTLSEVQCNLFSRYFCWVLNSCYVLGLSVLEISFHSTFKTVDEFCFRDLIPYAIICIFFFFIN

**ELFDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLELVRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVCFEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAKVADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAV**********************HVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQ*GKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGELLSCGFTLSEVQCNLFSRYFCWVLNSCYVLGLSVLEISFHSTFKTVDEFCFRDLIPYAIICIFFFFIN

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MEELFDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIxxxxxxxxxxxxxxxxxxxxxRAIVEIGERLKGVKEALRDGRxxxxxxxxxxxxxxxxxxxxxASEPLVYGLLRKEWLVCFEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAKVADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQESTGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGELLSCGFTLSEVQCNLFSRYFCWVLNSCYVLGLSVLEISFHSTFKTVDEFCFRDLIPYAIICIFFFFIN

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		790	2.2.26 [Sep-21-2011]
O48626		742	Centromere/kinetochore pr	yes	no	0.903	0.962	0.644	0.0
Q5RFM4		779	Centromere/kinetochore pr	yes	no	0.873	0.885	0.233	2e-39
O43264		779	Centromere/kinetochore pr	yes	no	0.867	0.879	0.232	2e-39
Q4V8C2		777	Centromere/kinetochore pr	yes	no	0.877	0.891	0.234	3e-39
O54692		779	Centromere/kinetochore pr	yes	no	0.867	0.879	0.225	8e-39
O44218		718	Centromere/kinetochore pr	yes	no	0.441	0.486	0.224	2e-10
Q9W4X9		721	Centromere/kinetochore pr	yes	no	0.434	0.475	0.216	2e-09
O44219		714	Centromere/kinetochore pr	N/A	no	0.434	0.480	0.225	2e-07

>sp\|O48626\|ZW10_ARATH Centromere/kinetochore protein zw10 homolog OS=Arabidopsis thaliana GN=ZW10 PE=2 SV=1	Back alignment and function desciption

 Score =  960 bits (2482), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/734 (64%), Positives = 595/734 (81%), Gaps = 20/734 (2%)

Query: 1   MEELFDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDF 60
           ++ LF++INVRDLL+ HDL D T PL+APDLRLLI+RLE HSL+IKSKVQSY+ +HH DF
Sbjct: 4   IDALFESINVRDLLAGHDLNDPTTPLSAPDLRLLINRLESHSLRIKSKVQSYLVAHHSDF 63

Query: 61  ASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLEL 120
           + LFSLC DTVSRT  IS D+SD+L L+S RPID E++ ++DE++ K KE ++K+E L+L
Sbjct: 64  SELFSLCQDTVSRTRLISDDVSDVLQLVSDRPIDVEIRSVVDEITEKTKEVKLKRESLDL 123

Query: 121 VRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVC 180
           V AIV I E L+  KEAL++GR RFAAE +RELK  LR+G+E   EP+ Y LLRKEW  C
Sbjct: 124 VNAIVGICEALQETKEALKNGRFRFAAERIRELKVVLRIGEEEDGEPVAYALLRKEWSNC 183

Query: 181 FEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAK 240
           F+EIQE+L KF+E+AVRFE +S+R+ +KYQL+V    GI L TVLEAMEV+GILDYGLAK
Sbjct: 184 FDEIQEVLAKFMENAVRFELDSSRIRIKYQLSVGETAGIALSTVLEAMEVIGILDYGLAK 243

Query: 241 VADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGI 300
            AD   K+VI+PAV++ S    VE+L     +++EA LR+  S D K E+VDG  +YSGI
Sbjct: 244 AADSIFKHVITPAVTHASTFAAVEDLCKSAGEVTEATLRLEQSSDHKFEDVDGDAMYSGI 303

Query: 301 IQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHT 360
           ++VVKFI   +C  N +W+  FGRLTWPRISELIIS FLSKVVPEDASKLADFQKII+ T
Sbjct: 304 LKVVKFICSSLCFGNVTWIHSFGRLTWPRISELIISKFLSKVVPEDASKLADFQKIIERT 363

Query: 361 SEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQE 420
           S+FEAALKE+ F+S+SD  ++RLS +AE+VEVHFASRKK EILAKARNLLLQC+F +PQ+
Sbjct: 364 SQFEAALKELNFVSSSD-AESRLSKYAEDVEVHFASRKKIEILAKARNLLLQCNFTIPQD 422

Query: 421 STGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAF 480
                       +A+ +++H+V LLF SERCVV++AASQLM LVH+ L+D+C+SS RVA 
Sbjct: 423 ------------IAMRNAKHIVCLLFSSERCVVSEAASQLMNLVHKTLEDVCVSSARVAS 470

Query: 481 EFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSS 540
           EFY+AARD+ILLYEA+VPVKLE+QL+G+N+ AVL+HNDCLYL +EILG AFEY + FPSS
Sbjct: 471 EFYNAARDSILLYEAVVPVKLEKQLDGLNEAAVLLHNDCLYLFEEILGLAFEYRASFPSS 530

Query: 541 IKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIE 600
           IKE+AVFAD+APRF LMAEE+LQ+Q+ +VI +LREA+D ADGFQNTHQI+QF+SA+FSI+
Sbjct: 531 IKEYAVFADIAPRFKLMAEEVLQKQVHLVISSLREAIDSADGFQNTHQIKQFKSAEFSID 590

Query: 601 QVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIH 660
           QVVF L+ VH+IWEP+L P TY +SMC VLESVF RI RDILLLDDMAA+ET +LQ+LI+
Sbjct: 591 QVVFSLKNVHMIWEPVLRPKTYKQSMCAVLESVFRRIARDILLLDDMAADETFELQKLIY 650

Query: 661 LMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWES 720
           LML+NLSS+L+S+ + ++        +RPLDD+IPSL K RKLAELLDMPL SIT+AWES
Sbjct: 651 LMLKNLSSVLDSVRSADET-------SRPLDDIIPSLRKTRKLAELLDMPLMSITSAWES 703

Query: 721 GELLSCGFTLSEVQ 734
           GEL  C FT +EVQ
Sbjct: 704 GELFRCNFTRTEVQ 717

May be required for accurate chromosome segregation.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q5RFM4\|ZW10_PONAB Centromere/kinetochore protein zw10 homolog OS=Pongo abelii GN=ZW10 PE=2 SV=3	Back alignment and function description

>sp\|O43264\|ZW10_HUMAN Centromere/kinetochore protein zw10 homolog OS=Homo sapiens GN=ZW10 PE=1 SV=3	Back alignment and function description

>sp\|Q4V8C2\|ZW10_RAT Centromere/kinetochore protein zw10 homolog OS=Rattus norvegicus GN=Zw10 PE=2 SV=3	Back alignment and function description

>sp\|O54692\|ZW10_MOUSE Centromere/kinetochore protein zw10 homolog OS=Mus musculus GN=Zw10 PE=2 SV=3	Back alignment and function description

>sp\|O44218\|ZW10_DROPS Centromere/kinetochore protein zw10 OS=Drosophila pseudoobscura pseudoobscura GN=mit(1)15 PE=3 SV=2	Back alignment and function description

>sp\|Q9W4X9\|ZW10_DROME Centromere/kinetochore protein zw10 OS=Drosophila melanogaster GN=mit(1)15 PE=1 SV=2	Back alignment and function description

>sp\|O44219\|ZW10_DROGR Centromere/kinetochore protein zw10 OS=Drosophila grimshawi GN=mit(1)15 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		790
224064880		767	predicted protein [Populus trichocarpa]	0.927	0.955	0.710	0.0
357493103		752	Centromere/kinetochore protein zw10-like	0.918	0.965	0.695	0.0
356501253		742	PREDICTED: centromere/kinetochore protei	0.906	0.964	0.695	0.0
225447178		744	PREDICTED: centromere/kinetochore protei	0.910	0.966	0.709	0.0
356553727		742	PREDICTED: centromere/kinetochore protei	0.907	0.966	0.696	0.0
449450964		760	PREDICTED: centromere/kinetochore protei	0.926	0.963	0.664	0.0
449517435		760	PREDICTED: centromere/kinetochore protei	0.926	0.963	0.663	0.0
30685491		742	centromere/kinetochore protein ZW10 [Ara	0.903	0.962	0.644	0.0
297823079		741	ATZW10 [Arabidopsis lyrata subsp. lyrata	0.902	0.962	0.660	0.0
26450896		742	unknown protein [Arabidopsis thaliana]	0.903	0.962	0.643	0.0

>gi\|224064880\|ref\|XP_002301597.1\| predicted protein [Populus trichocarpa] gi\|222843323\|gb\|EEE80870.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1061 bits (2745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/743 (71%), Positives = 625/743 (84%), Gaps = 10/743 (1%)

Query: 1   MEELFDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDF 60
           M+ LFD INVRDLLST DL D TAPL+APDLRLLI+RLE HSLQIKSKV+SYI +HH DF
Sbjct: 1   MDALFDAINVRDLLSTSDLRDPTAPLSAPDLRLLITRLESHSLQIKSKVKSYILAHHSDF 60

Query: 61  ASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLEL 120
           +SLFSLCND VSRTD+I+  L D+L L+S  PID E++EI++E+S KMKEAR K+E+L+L
Sbjct: 61  SSLFSLCNDAVSRTDQINQCLLDLLALVSDSPIDGEIREIVEELSGKMKEAREKREILDL 120

Query: 121 VRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVC 180
           VR IV I ERL G+KE +++GRLR AA ++R+LKK LR+GDE   EP+VYGLLRKEWL C
Sbjct: 121 VRIIVGISERLGGIKEGVKNGRLRLAAVDIRDLKKVLRIGDEEEREPVVYGLLRKEWLDC 180

Query: 181 FEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGI-ELRTVLEAMEVVGILDYGLA 239
           FEEIQE+LVKFVE+AV+FE +S+ V VKY+L+VDG+ G+ +L +VL++MEV+GILDYG A
Sbjct: 181 FEEIQEMLVKFVENAVQFEPDSSIVRVKYRLSVDGIAGVVDLHSVLDSMEVIGILDYGFA 240

Query: 240 KVADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSG 299
           KVAD  IK+VI P V  GS I+ +E+L    ++M+EAIL+++ S  + + +VDG+ IYS 
Sbjct: 241 KVADQMIKHVIIPVVKKGSSISSMEDLKDVSKEMTEAILKIL-STSNPMVDVDGEIIYSR 299

Query: 300 IIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDH 359
           IIQV+ F+ K IC +N SW+RCFGRLTWPRISEL+ISNFLSK VPEDASKLA FQKII  
Sbjct: 300 IIQVINFVCKCICFENPSWIRCFGRLTWPRISELVISNFLSKAVPEDASKLAGFQKIIKD 359

Query: 360 TSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQ 419
           T EFE ALKEM FISASD+ D +LSNFAENVE+HFASRKK EILAKARNLLLQCDF +PQ
Sbjct: 360 TYEFETALKEMAFISASDSTDQKLSNFAENVELHFASRKKIEILAKARNLLLQCDFTIPQ 419

Query: 420 ESTGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVA 479
           E T K    KN G AV+  EHVVDLLF+SERC+V+KAA+QLM LVHQ L+DICLSS RVA
Sbjct: 420 EYTRKGHPMKNSGTAVNYYEHVVDLLFLSERCLVSKAATQLMDLVHQTLKDICLSSPRVA 479

Query: 480 FEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPS 539
            EFYHAARDAILLYEA+VPVKLERQL+G+NQVAVLMHNDC YLSQEILG AFEY SDFP 
Sbjct: 480 LEFYHAARDAILLYEAVVPVKLERQLDGVNQVAVLMHNDCFYLSQEILGLAFEYRSDFPI 539

Query: 540 SIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSI 599
           SIKEHAVF D+APRF +MAEEILQRQIQ+VI NL+EA+DGADGFQNTHQ+QQFESAKFSI
Sbjct: 540 SIKEHAVFVDLAPRFQVMAEEILQRQIQLVISNLKEAIDGADGFQNTHQVQQFESAKFSI 599

Query: 600 EQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLI 659
           +QVVFILEKVHIIWEPLLLPSTY +S+C VLESVF+R+T+DILLLDDMAAEETLQLQRLI
Sbjct: 600 DQVVFILEKVHIIWEPLLLPSTYKKSLCMVLESVFARVTKDILLLDDMAAEETLQLQRLI 659

Query: 660 HLMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLA--------ELLDMPL 711
           HLMLE++SSL+ESL+ V QK + E      +DDLIPSL K RK+A        +LLDMPL
Sbjct: 660 HLMLESISSLMESLSTVIQKERPEEYHTSLVDDLIPSLRKIRKVAGKFSVCQSKLLDMPL 719

Query: 712 RSITAAWESGELLSCGFTLSEVQ 734
           +SIT AWESGEL+S GFT+ EV+
Sbjct: 720 KSITTAWESGELISIGFTMLEVK 742

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|357493103\|ref\|XP_003616840.1\| Centromere/kinetochore protein zw10-like protein [Medicago truncatula] gi\|355518175\|gb\|AES99798.1\| Centromere/kinetochore protein zw10-like protein [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356501253\|ref\|XP_003519440.1\| PREDICTED: centromere/kinetochore protein zw10 homolog [Glycine max]	Back alignment and taxonomy information

>gi\|225447178\|ref\|XP_002276594.1\| PREDICTED: centromere/kinetochore protein zw10 homolog [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356553727\|ref\|XP_003545204.1\| PREDICTED: centromere/kinetochore protein zw10 homolog [Glycine max]	Back alignment and taxonomy information

>gi\|449450964\|ref\|XP_004143232.1\| PREDICTED: centromere/kinetochore protein zw10 homolog [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449517435\|ref\|XP_004165751.1\| PREDICTED: centromere/kinetochore protein zw10 homolog [Cucumis sativus]	Back alignment and taxonomy information

>gi\|30685491\|ref\|NP_565757.2\| centromere/kinetochore protein ZW10 [Arabidopsis thaliana] gi\|12643613\|sp\|O48626.1\|ZW10_ARATH RecName: Full=Centromere/kinetochore protein zw10 homolog gi\|2661179\|gb\|AAB88246.1\| AtZW10 [Arabidopsis thaliana] gi\|17978942\|gb\|AAL47437.1\| At2g32900/T21L14.16 [Arabidopsis thaliana] gi\|330253665\|gb\|AEC08759.1\| centromere/kinetochore protein ZW10 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297823079\|ref\|XP_002879422.1\| ATZW10 [Arabidopsis lyrata subsp. lyrata] gi\|297325261\|gb\|EFH55681.1\| ATZW10 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|26450896\|dbj\|BAC42555.1\| unknown protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		790
TAIR\|locus:2059412		742	ATZW10 [Arabidopsis thaliana (	0.818	0.871	0.646	1.2e-225
UNIPROTKB\|F1NVT0		753	ZW10 "Uncharacterized protein"	0.393	0.413	0.218	5.7e-38
UNIPROTKB\|F1N958		779	ZW10 "Uncharacterized protein"	0.393	0.399	0.220	3e-37
UNIPROTKB\|F6UZG3		779	ZW10 "Uncharacterized protein"	0.360	0.365	0.243	5.6e-37
ZFIN\|ZDB-GENE-040426-800		771	zw10 "ZW10 homolog, centromere	0.470	0.482	0.243	6.1e-37
UNIPROTKB\|O43264		779	ZW10 "Centromere/kinetochore p	0.360	0.365	0.237	3.1e-36
UNIPROTKB\|E2QSG4		785	ZW10 "Uncharacterized protein"	0.364	0.366	0.240	7.4e-36
UNIPROTKB\|Q0P5L6		779	ZW10 "Uncharacterized protein"	0.360	0.365	0.233	6.9e-35
RGD\|1309197		777	Zw10 "zw10 kinetochore protein	0.360	0.366	0.240	1.2e-33
MGI\|MGI:1349478		779	Zw10 "zw10 kinetochore protein	0.360	0.365	0.237	2.1e-33

TAIR\|locus:2059412 ATZW10 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2178 (771.8 bits), Expect = 1.2e-225, P = 1.2e-225
 Identities = 427/660 (64%), Positives = 538/660 (81%)

Query:     1 MEELFDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDF 60
             ++ LF++INVRDLL+ HDL D T PL+APDLRLLI+RLE HSL+IKSKVQSY+ +HH DF
Sbjct:     4 IDALFESINVRDLLAGHDLNDPTTPLSAPDLRLLINRLESHSLRIKSKVQSYLVAHHSDF 63

Query:    61 ASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLEL 120
             + LFSLC DTVSRT  IS D+SD+L L+S RPID E++ ++DE++ K KE ++K+E L+L
Sbjct:    64 SELFSLCQDTVSRTRLISDDVSDVLQLVSDRPIDVEIRSVVDEITEKTKEVKLKRESLDL 123

Query:   121 VRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVC 180
             V AIV I E L+  KEAL++GR RFAAE +RELK  LR+G+E   EP+ Y LLRKEW  C
Sbjct:   124 VNAIVGICEALQETKEALKNGRFRFAAERIRELKVVLRIGEEEDGEPVAYALLRKEWSNC 183

Query:   181 FEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAK 240
             F+EIQE+L KF+E+AVRFE +S+R+ +KYQL+V    GI L TVLEAMEV+GILDYGLAK
Sbjct:   184 FDEIQEVLAKFMENAVRFELDSSRIRIKYQLSVGETAGIALSTVLEAMEVIGILDYGLAK 243

Query:   241 VADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGI 300
              AD   K+VI+PAV++ S    VE+L     +++EA LR+  S D K E+VDG  +YSGI
Sbjct:   244 AADSIFKHVITPAVTHASTFAAVEDLCKSAGEVTEATLRLEQSSDHKFEDVDGDAMYSGI 303

Query:   301 IQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHT 360
             ++VVKFI   +C  N +W+  FGRLTWPRISELIIS FLSKVVPEDASKLADFQKII+ T
Sbjct:   304 LKVVKFICSSLCFGNVTWIHSFGRLTWPRISELIISKFLSKVVPEDASKLADFQKIIERT 363

Query:   361 SEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQE 420
             S+FEAALKE+ F+S+SD  ++RLS +AE+VEVHFASRKK EILAKARNLLLQC+F +PQ+
Sbjct:   364 SQFEAALKELNFVSSSD-AESRLSKYAEDVEVHFASRKKIEILAKARNLLLQCNFTIPQD 422

Query:   421 STGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAF 480
                         +A+ +++H+V LLF SERCVV++AASQLM LVH+ L+D+C+SS RVA 
Sbjct:   423 ------------IAMRNAKHIVCLLFSSERCVVSEAASQLMNLVHKTLEDVCVSSARVAS 470

Query:   481 EFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSS 540
             EFY+AARD+ILLYEA+VPVKLE+QL+G+N+ AVL+HNDCLYL +EILG AFEY + FPSS
Sbjct:   471 EFYNAARDSILLYEAVVPVKLEKQLDGLNEAAVLLHNDCLYLFEEILGLAFEYRASFPSS 530

Query:   541 IKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIE 600
             IKE+AVFAD+APRF LMAEE+LQ+Q+ +VI +LREA+D ADGFQNTHQI+QF+SA+FSI+
Sbjct:   531 IKEYAVFADIAPRFKLMAEEVLQKQVHLVISSLREAIDSADGFQNTHQIKQFKSAEFSID 590

Query:   601 QVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIH 660
             QVVF L+ VH+IWEP+L P TY +SMC VLESVF RI RDILLLDDMAA+ET +LQ+LI+
Sbjct:   591 QVVFSLKNVHMIWEPVLRPKTYKQSMCAVLESVFRRIARDILLLDDMAADETFELQKLIY 650

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0007067 "mitosis" evidence=IEA

GO:0007059 "chromosome segregation" evidence=ISS

UNIPROTKB\|F1NVT0 ZW10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1N958 ZW10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F6UZG3 ZW10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040426-800 zw10 "ZW10 homolog, centromere/kinetochore protein (Drosophila)" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|O43264 ZW10 "Centromere/kinetochore protein zw10 homolog" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E2QSG4 ZW10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|Q0P5L6 ZW10 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

RGD\|1309197 Zw10 "zw10 kinetochore protein" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

MGI\|MGI:1349478 Zw10 "zw10 kinetochore protein" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O48626	ZW10_ARATH	No assigned EC number	0.6444	0.9037	0.9622	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		790
pfam06248		593	pfam06248, Zw10, Centromere/kinetochore Zw10	1e-134

>gnl\|CDD\|218956 pfam06248, Zw10, Centromere/kinetochore Zw10	Back alignment and domain information

 Score =  410 bits (1056), Expect = e-134
 Identities = 161/593 (27%), Positives = 278/593 (46%), Gaps = 34/593 (5%)

Query: 26  LTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDLSDIL 85
           L   DLR  IS+L     + K +V+  I   + DF    S   D + +   +S D+SD+L
Sbjct: 7   LEKEDLRGKISKLLSKVEEYKEEVRDMINKKYSDFLPNMSSAEDLLEQVSSLSEDISDLL 66

Query: 86  GLISYRPIDKEVKEIIDEVSAKMKEARVKKELLELVRAIVEIGERLKGVKEALRDGRLRF 145
                  I +++ + ++E++   ++   K   L++++ +++I E L+   EAL       
Sbjct: 67  KSEVSNEILQDLNDAVEELAELKRQLEEKILGLKILQKLLKIHEALEETNEALSGKDYLK 126

Query: 146 AAEELRELKKDLRVGDENA-SEPLVYGLLRKEWLVCFEEIQELLVKFVESAVRFEKES-- 202
           AA+ L + K  L         E  +Y  LR E+ V  + +   L +  +  V+++  S  
Sbjct: 127 AADLLEKAKSLLDGLKSRKGEELEIYKSLRLEYTVQSQNLLYHLGEEWDRLVQWKLPSSK 186

Query: 203 ------NRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAKVADLKIKYVISPAVSY 256
                 N       L+ D     EL +VL+A+ V+G L+Y L K     +K V  P +  
Sbjct: 187 ELGSAQNTKKTTLHLSKDE-SQGELSSVLQALAVLGELEYKLKKFCQFLLKNVFEPLIVK 245

Query: 257 GSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGIIQVVKFIHKRICLQNG 316
              +  VE+     +   +  L        K+   D K ++S I  V+K + K +   + 
Sbjct: 246 PVLVVCVEDQ---KDGTVQITLSYESK-TTKLLRPDPKKVFSKIRLVLKTLSKMLLSVSV 301

Query: 317 SWVRCF---GRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFI 373
                F   G L W R+SEL+I + L K +PE +S+L ++ ++I+ T EFEAALKEM F+
Sbjct: 302 DDCSLFEILGDLIWERLSELLIKDCLVKSIPETSSELQEYSEVIEDTEEFEAALKEMNFL 361

Query: 374 SASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDF--------------AVPQ 419
              D  D  L  +A +V  HFA++K  ++L  ARNL+                    +P 
Sbjct: 362 D-GDATD--LLKYARDVNTHFANKKCQDVLVTARNLMTSDLHNTVLVTPDSKVVKPKLPS 418

Query: 420 ESTGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVA 479
                    K++ + +++ +H+  L F   RC V+++   LMKL ++ L +   SS   A
Sbjct: 419 SKAETKAQAKSERLWLENEKHLSCLSFSFPRCRVSESVQDLMKLAYKTLSEATTSSEGCA 478

Query: 480 FEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPS 539
            + ++  R+   LY  +VP   ++ L  I Q++ L HN+C+YLS  +L    ++ ++ PS
Sbjct: 479 DQLFYTVRNIFQLYYDVVPTYHKKLLLKIPQLSALFHNNCMYLSHWLLTLGHQFRAELPS 538

Query: 540 SIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQF 592
            +K+ A F D+ P    + EE    Q+      L E L  A GF+N +  + +
Sbjct: 539 PLKDIATFVDLVPGLRRLGEECFLAQLNRQRSELLERLSSARGFENLNDEENY 591

Zw10 and rough deal proteins are both required for correct metaphase check-pointing during mitosis. These proteins bind to the centromere/kinetochore. Length = 593

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		790
KOG2163		719	consensus Centromere/kinetochore protein zw10 invo	100.0
PF06248		593	Zw10: Centromere/kinetochore Zw10; InterPro: IPR00	100.0
PF11989		291	Dsl1_C: Retrograde transport protein Dsl1 C termin	99.97
PF10475		291	DUF2450: Protein of unknown function N-terminal do	98.49
PF04100		383	Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007	97.87
KOG2163		719	consensus Centromere/kinetochore protein zw10 invo	97.75
KOG2176		800	consensus Exocyst complex, subunit SEC15 [Intracel	97.61
KOG2307		705	consensus Low density lipoprotein receptor [Intrac	97.54
KOG2180		793	consensus Late Golgi protein sorting complex, subu	96.72
KOG3691		982	consensus Exocyst complex subunit Sec8 [Intracellu	96.71
PF04124		338	Dor1: Dor1-like family ; InterPro: IPR007255 Dor1	96.69
PF10392		132	COG5: Golgi transport complex subunit 5; InterPro:	96.39
PF04437		494	RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00	96.23
PF04048		142	Sec8_exocyst: Sec8 exocyst complex component speci	95.42
KOG2115		951	consensus Vacuolar sorting protein VPS45 [Intracel	95.08
PF06046		566	Sec6: Exocyst complex component Sec6; InterPro: IP	95.02
PF06148		133	COG2: COG (conserved oligomeric Golgi) complex com	94.78
PF15469		182	Sec5: Exocyst complex component Sec5	94.26
PF10191		766	COG7: Golgi complex component 7 (COG7); InterPro:	93.51
KOG0412		773	consensus Golgi transport complex COD1 protein [In	92.04
PF11988		354	Dsl1_N: Retrograde transport protein Dsl1 N termin	91.74
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	88.42
KOG2069		581	consensus Golgi transport complex subunit [Intrace	87.86
PF08700		87	Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te	87.75
PF04912		388	Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamit	80.69

>KOG2163 consensus Centromere/kinetochore protein zw10 involved in mitotic chromosome segregation [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

Probab=100.00  E-value=1.8e-97  Score=812.00  Aligned_cols=686  Identities=23%  Similarity=0.296  Sum_probs=577.9

Q ss_pred             CcccccchhhhhhhhcCCCCCCCCCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhhhhhhHHHhHHHHHH
Q 003864            1 MEELFDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKS-KVQSYIASHHQDFASLFSLCNDTVSRTDEIST   79 (790)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dl~~~i~~l~~~~~e~k~-~v~~~i~~~y~~f~~~~~~~~dl~~~~~~l~~   79 (790)
                      +++||.++|.++.|..            |||+..|.++..++.+.++ +|++.|.++|++|.|.+.+...+.+++.+|..
T Consensus         2 ~~~l~Es~n~~g~lek------------edl~~~it~ls~rv~r~~gnrv~shi~~~yskflp~~~s~~~di~E~~sL~r   69 (719)
T KOG2163|consen    2 IDALAESENSYGDLEK------------EDLKNGITSLSQRVVRKYGNRVVSHIVNAYSKFLPDRLSNLEDIAEMSSLTR   69 (719)
T ss_pred             chHHHHHhccccchhh------------hhhcCCccccchHHHHHHHHHHHHHHHHHHhhhccccccchhhHHHHHHHhh
Confidence            3678888887766554            5555555556677778888 89999999999999999999999999999999


Q ss_pred             hHHHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhhc
Q 003864           80 DLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLELVRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRV  159 (790)
Q Consensus        80 ~i~~l~~~i~~~~~~~~l~~~v~~~~~~~~el~~~~~~l~~l~~l~~i~~~L~~~~~~l~~~~l~~A~~~L~~l~~~l~~  159 (790)
                      +|+++++.|++ +..+.+...-..++.-+++++   ..+-.+++.+++..+-.+.+.....+.+.++++.|+++.+.++.
T Consensus        70 di~~l~~~i~s-dv~d~L~e~~~~~~d~e~qle---v~l~~l~~~qev~~~~E~~ncve~~kai~~~lq~l~ea~kll~~  145 (719)
T KOG2163|consen   70 DISNLIDQIAS-DVPDMLAEIKSQAQDCENQLE---VQLMKLVEEQEVIMRSETTNCVEWGKAILACLQFLNEANKLLEG  145 (719)
T ss_pred             hHHHHHHHhhh-hhHHHHHHhhcchhhhhhHHH---HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999877 566666666666666667776   34445777888888888888888889999999999999999988


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCC-------eEEEEEEeecCCC---CcccHHHHHH---
Q 003864          160 GDENASEPLVYGLLRKEWLVCFEEIQELLVKFVESAVRFEKESN-------RVLVKYQLTVDGL---DGIELRTVLE---  226 (790)
Q Consensus       160 ~~~~~~~~~I~~~L~~~~~~l~~~i~~~L~~~w~~lv~~~~~~~-------~i~v~~~i~~~~~---~~~~L~~vl~---  226 (790)
                      .+....+..+.+.+..++.-++.+..+++...|.+...|..-..       ...+..++-.++.   ...++.....   
T Consensus       146 ~grd~fd~~~lk~l~~vlrI~k~ne~yel~a~~~~~~~w~~~~s~qe~ldr~~q~~~~~f~~ss~ve~q~~l~~t~sa~i  225 (719)
T KOG2163|consen  146 IGRDGFDMSVLKHLAAVLRILKYNERYELSADYERAMNWPKLSSIQECLDRTNQVSFSVFNVSSRVEDQKMLNETLSAMI  225 (719)
T ss_pred             cCcccccHHHHHHHHHHHHHHHHhhccchHHHHHHHHhcccCccHHHHHHHHHHhheeeeeccchhhhhhcCChHHHHHH
Confidence            87777888889999999999999999999999998888743221       1112222211110   1234444444   


Q ss_pred             HHHHhhhhhHHHHHHHHHHHHHhhhhhhcCCCCcccccccCCCCcccccceEEeeccCCccccCCChhHHHHHHHHHHHH
Q 003864          227 AMEVVGILDYGLAKVADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGIIQVVKF  306 (790)
Q Consensus       227 AL~~lg~l~~~l~~l~~~L~~~il~Pli~~~~~~~~v~~~~~~~~~~~~~~L~~~~~~~~k~~~~~~~~v~~~l~~v~~F  306 (790)
                      |+..+++..+..+  +..|+++++.|+.+.|...++++.  ..+    ....++......    .+..+.|.++..|++-
T Consensus       226 a~s~l~E~~~~~k--~~~Lldyclapvasrp~~hvyie~--~p~----~~~~Rf~~~~~~----~s~a~~f~~v~~VlEs  293 (719)
T KOG2163|consen  226 AISQLPERLDAWK--IVILLDYCLAPVASRPGVHVYIED--NPT----PDQTRFLINQKP----RSKADKFIDVAKVLES  293 (719)
T ss_pred             HHHHhHHHhhhHH--HHHHHHHhHHHhccCccceeeecc--CCC----cceeeeeecccc----CchHhhhhHHHHHHHH
Confidence            4445555444444  578999999999999977666553  222    244555443322    3667888888888888


Q ss_pred             HHHHccc---------CCCchHHHhhhhhhHHHHHHHHHhhcccCCCCChhhhhhHHHHHHHHHHHHHHHHHcCcccCCC
Q 003864          307 IHKRICL---------QNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASD  377 (790)
Q Consensus       307 L~~~L~~---------~n~~l~~~lg~~i~~~ls~~lI~~~L~~aIP~s~~~L~~f~~vi~~~~~Fe~~L~~lgf~~~~~  377 (790)
                      +.-.|+.         ....+.+++|++||.+|+++|+++||.++||.+..++.+|+.+|+.+.+||..|+++.|++..+
T Consensus       294 l~l~Lh~l~~~e~evt~~~~~~emigDhi~e~l~~~l~k~cl~~avP~~stkl~d~e~iie~t~qfE~aLkem~f~~~~d  373 (719)
T KOG2163|consen  294 LELKLHVLHSHELEVTTGKTFTEMIGDHIEEQLITMLLKDCLAIAVPVTSTKLEDQEMIIELTQQFEVALKEMKFLGFFD  373 (719)
T ss_pred             hhhcccccccchhhhcccchHHHHHhHHHHHHHHHHHHHhhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence            7755441         2467999999999999999999999999999999999999999999999999999997776554


Q ss_pred             ccchhHhhHHHhHHHHHHHHHhHHHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccccccccccceeecccH
Q 003864          378 NKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQESTGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAA  457 (790)
Q Consensus       378 ~~~~~L~~~v~~v~~~f~~krr~~~L~~aR~l~~~~d~~~~~~~~~~~~wg~~~~~~~~~~~~~~~~~~~~e~c~IS~~~  457 (790)
                      . .+.|.+|++++++||++|||.++|++||++|.++-.+.|..-.            ....+++....|.+|+|+||+++
T Consensus       374 q-~~allkfaed~ethfanRkc~~il~kARnLi~~~~~~~v~vip------------ntha~hvanl~FsfprC~vSeSa  440 (719)
T KOG2163|consen  374 Q-KSALLKFAEDTETHFANRKCFAILSKARNLINETYDKLVTVIP------------NTHAEHVANLYFSFPRCTVSESA  440 (719)
T ss_pred             h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhceecc------------cccHHHHhhhhccCcceeecHHH
Confidence            3 4699999999999999999999999999999976655554321            12234555677999999999999


Q ss_pred             HHHHHHHHHHHHhhhhcc-hHHHHHHHHHHHHHHHHHHHhhhhhhHHhhccccceeeeeecchHHHHHHHhhhhhhhccC
Q 003864          458 SQLMKLVHQILQDICLSS-TRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSD  536 (790)
Q Consensus       458 ~~l~~Li~~~L~ea~~ss-~~~a~~L~~~~~~il~LyralvP~~h~~~l~s~p~~a~l~yNDC~YLA~~L~~l~~~~~~~  536 (790)
                      .++|+|++++|.+++.++ +++|.+||+++|+|+.||.++||++|++.|+|+||+|++|||||||++|+..+.++     
T Consensus       441 ~~fvnL~~~tL~~at~ss~dq~a~~la~~arni~hly~~vVP~khrell~siPq~AaifhNNCmyi~h~~~~h~f-----  515 (719)
T KOG2163|consen  441 INFVNLLRDTLKAATASSDDQAAAKLALTARNIVHLYVIVVPRKHRELLSSIPQMAAIFHNNCMYISHCIMTHSF-----  515 (719)
T ss_pred             HHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcchHHHHHhcccHHHHHHHHhhhc-----
Confidence            999999999999999887 89999999999999999999999999999999999999999999999998777664     


Q ss_pred             CCcchhhHhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhhhhhHHHHHHHHHHHHHHHHhhcccC
Q 003864          537 FPSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPL  616 (790)
Q Consensus       537 lp~~l~~~~~fvd~~~~fr~~ae~~~q~qi~~~~~~L~e~L~~a~gf~~~~~~~~~e~~e~av~q~l~~L~~L~~~W~~v  616 (790)
                           .+..+|+|++|+||.+|++||+.|+.+|+++|+++|++++||.++++...++.++++|+||++||+.|+++|++|
T Consensus       516 -----~g~~~ladlaprlr~~a~ecf~kQv~~q~seL~e~l~sa~~Fen~~~ee~~ssa~klVrQcL~qLkll~~vw~~v  590 (719)
T KOG2163|consen  516 -----LGEPLLADLAPRLRTVAAECFEKQVTRQRSELTEYLESASIFENLPAEEMSSSADKLVRQCLLQLKLLAKVWREV  590 (719)
T ss_pred             -----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcHHhhcccHHHHHHHHHHHHHHHHHHHhcc
Confidence                 346689999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCCCCCCCCccchhccccc
Q 003864          617 LLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIPS  696 (790)
Q Consensus       617 Lp~svy~~~ig~Lv~~v~~~ii~~Il~l~DIs~~es~~L~~l~~~~~~~l~~LF~~~~~~~~~~~~~e~~~~~~~~~vps  696 (790)
                      ||+.+||++||+|+|+++.++|++|+.++|||++++.+|+.||..+++.++++|.++.+       .    +.+..||++
T Consensus       591 Lpe~vYck~mc~Llnt~~~elir~V~tl~Disa~da~eL~dLik~vL~~~p~vfa~~~e-------~----~et~v~v~~  659 (719)
T KOG2163|consen  591 LPEVVYCKVMCSLLNTLLDELIRHVVTLSDISANDANELADLIKRVLEVVPNVFAYKEE-------T----KETDVCVRE  659 (719)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHhhhhhhcChhh-------c----cCccccHHH
Confidence            99999999999999999999999999999999999999999999999999999988643       1    246789999


Q ss_pred             hHhHHHHHHHhcCChhhHHHHhhcCC-cccCCCCHHHHHHHHHhhcccccccc
Q 003864          697 LCKFRKLAELLDMPLRSITAAWESGE-LLSCGFTLSEVQCNLFSRYFCWVLNS  748 (790)
Q Consensus       697 W~Kf~~L~~iL~asL~dI~~~W~~G~-ll~~~Fs~~Ev~~LIkAlF~~~~~~~  748 (790)
                      |++|+++.++|++||.||+.||.+|+ |+++.|+.+||++||||+|.++.-|.
T Consensus       660 w~pl~el~~mL~asLmeIt~rW~dgkGplaa~fsrsEVk~lIkALFqDs~wRa  712 (719)
T KOG2163|consen  660 WFPLNELVFMLGASLMEITHRWFDGKGPLAAHFSRSEVKGLIKALFQDSQWRA  712 (719)
T ss_pred             hccHHHHHHHhCchHhHHHHHHhcCCccHHhhccHHHHHHHHHHHhhchHHHH
Confidence            99999999999999999999999999 99999999999999999999997664

>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells	Back alignment and domain information

>PF11989 Dsl1_C: Retrograde transport protein Dsl1 C terminal; InterPro: IPR021876 Dsl1 is a peripheral membrane protein required for transport between the Golgi and the endoplasmic reticulum []	Back alignment and domain information

>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known	Back alignment and domain information

>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []	Back alignment and domain information

>KOG2163 consensus Centromere/kinetochore protein zw10 involved in mitotic chromosome segregation [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 []	Back alignment and domain information

>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking	Back alignment and domain information

>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases	Back alignment and domain information

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>KOG2115 consensus Vacuolar sorting protein VPS45 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex	Back alignment and domain information

>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex	Back alignment and domain information

>PF15469 Sec5: Exocyst complex component Sec5	Back alignment and domain information

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []	Back alignment and domain information

>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF11988 Dsl1_N: Retrograde transport protein Dsl1 N terminal; InterPro: IPR021875 Dsl1 is a peripheral membrane protein required for transport between the Golgi and the endoplasmic reticulum []	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi	Back alignment and domain information

>PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) []	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		790
3k8p_C		357	DSL1, KLLA0C02695P; intracellular trafficking, DSL	3e-25
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>3k8p_C DSL1, KLLA0C02695P; intracellular trafficking, DSL1 complex, multisubunit tethering complex, snare proteins; 2.60A {Kluyveromyces lactis} Length = 357	Back alignment and structure

 Score =  107 bits (267), Expect = 3e-25
 Identities = 27/179 (15%), Positives = 61/179 (34%), Gaps = 24/179 (13%)

Query: 559 EEILQRQIQIVIFNLREALDG--ADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPL 616
            E+  R++ + +  +++ +     D  Q     ++      +I  +   L  +     P 
Sbjct: 171 MELNSRRLDLNLNLIKKTIYKLVNDQLQELKDNERTPDWDITISSL---LPYLKKTALPT 227

Query: 617 LLPSTYNRSMCTVLESVFSR-ITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAA 675
           L     N  +  ++  +    +  +IL    ++ + +  L   I L+L  L     +L  
Sbjct: 228 LYKLEDNTILVALIRYIVHDLVIDNILHWRVISEKSSENLSEFIMLLLSGLEIPRLNL-- 285

Query: 676 VNQKGKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGELLSCGFTLSEVQ 734
                         ++    S  K   L+++L   L+ I   +  GE     F   E+ 
Sbjct: 286 --------------IETYRHSREKLGILSKILTAHLKDILEMFYEGEFF--LFETDEIV 328

PyMOL of 3k8p

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		790
3k8p_C		357	DSL1, KLLA0C02695P; intracellular trafficking, DSL	99.95
2fji_1		399	Exocyst complex component SEC6; exocytosis, tandem	96.45
3hr0_A		263	COG4; conserved oligomeric golgi complex, intracel	96.13
2d2s_A		235	Exocyst complex component EXO84; tethering complex	92.68
3etv_A		355	Protein transport protein TIP20,linker,protein tra	92.08
3swh_A		341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	84.25

>3k8p_C DSL1, KLLA0C02695P; intracellular trafficking, DSL1 complex, multisubunit tethering complex, snare proteins; 2.60A {Kluyveromyces lactis}	Back alignment and structure

Probab=99.95  E-value=1.4e-27  Score=250.94  Aligned_cols=247  Identities=15%  Similarity=0.134  Sum_probs=173.0

Q ss_pred             ceeecccHHHHHHHHHHHHHhhhh-cchHHHHHHHHHHHHHHH-HHHHhhhhhhHHhhccccceeeeeecchHHHHHHHh
Q 003864          450 RCVVTKAASQLMKLVHQILQDICL-SSTRVAFEFYHAARDAIL-LYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEIL  527 (790)
Q Consensus       450 ~c~IS~~~~~l~~Li~~~L~ea~~-ss~~~a~~L~~~~~~il~-LyralvP~~h~~~l~s~p~~a~l~yNDC~YLA~~L~  527 (790)
                      ...||+.|+.+..++......+.. +...+. +-|..-.+++. .|-|+.-.+| .+-       -.||||--|+-.+=.
T Consensus        95 ~i~vt~lp~~f~~i~~~f~~~~~~~~~~~~~-~~~~yK~NlLqT~f~am~~~~~-~~W-------wqly~D~ryi~~~~~  165 (357)
T 3k8p_C           95 PIQVSVFVQSAAKVFTEFEQGCDTIGRSKVE-SIYLYKFNLLQTAFFAMVSEKV-NDW-------TQLYKDVRYLYTENP  165 (357)
T ss_dssp             CEEEETHHHHHHHHHHHHHHHHHTTTTTSSH-HHHHHHHHHHHHHHHHHHHHHC-SCH-------HHHHHHHHHHHHHCT
T ss_pred             hhhhhHhHHHHHHHHHHHHHHHHHhcchhHH-HHHHHHHHHHHHHHHHHHHHhh-hHH-------HHHHHHHHHHHhcCh
Confidence            389999999999999999988753 223333 55555555554 4888887777 332       789999999977611


Q ss_pred             hhhhhhccCCCcchhhH-hhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhhhhhHHHHHHHHHHHH
Q 003864          528 GFAFEYHSDFPSSIKEH-AVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFIL  606 (790)
Q Consensus       528 ~l~~~~~~~lp~~l~~~-~~fvd~~~~fr~~ae~~~q~qi~~~~~~L~e~L~~a~gf~~~~~~~~~e~~e~av~q~l~~L  606 (790)
                      .+.         .++++ .+|.+.--..++   ...-+-|+.|   |.++-+...+=+.       ..   .+++   -|
T Consensus       166 ~l~---------rl~EL~~~~le~~l~~~~---k~v~~lv~~q---L~~l~~nE~~p~W-------~~---t~~~---Ll  217 (357)
T 3k8p_C          166 KLL---------QLMELNSRRLDLNLNLIK---KTIYKLVNDQ---LQELKDNERTPDW-------DI---TISS---LL  217 (357)
T ss_dssp             TCH---------HHHHHHHHHHHHHHHHHH---HHHHHHHHHH---HHHHHHTSSSCCC-------HH---HHHT---HH
T ss_pred             hhH---------HHHHHHHHHHHHHHHHHH---HHHHHHHHHH---HHHHHhccCCCCH-------HH---HHHH---HH
Confidence            111         02232 244443322211   1112222222   3333333332222       11   1121   23


Q ss_pred             HHHHhhcccCCChHHHHHHHHHHHHHHH-HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCCCCCCC
Q 003864          607 EKVHIIWEPLLLPSTYNRSMCTVLESVF-SRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGD  685 (790)
Q Consensus       607 ~~L~~~W~~vLp~svy~~~ig~Lv~~v~-~~ii~~Il~l~DIs~~es~~L~~l~~~~~~~l~~LF~~~~~~~~~~~~~e~  685 (790)
                      --+.+.|.+.|.+....+.++.|+++++ ++||++|++++|||+++|++|+.||+.+ .++.++  |..           
T Consensus       218 P~i~~~i~~pl~k~~~~~~l~~lvnfi~~~~II~dIl~LeDISE~eS~~La~Li~~l-~~l~~l--P~l-----------  283 (357)
T 3k8p_C          218 PYLKKTALPTLYKLEDNTILVALIRYIVHDLVIDNILHWRVISEKSSENLSEFIMLL-LSGLEI--PRL-----------  283 (357)
T ss_dssp             HHHHHTHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHTSSCCCHHHHHHHHHHHHHH-HHHTCC--GGG-----------
T ss_pred             HHHHHHhhhHhhcchHHHHHHHHHHHHHhhHHHHHHcCcccCCHHHHHHHHHHHHHH-HcCCCC--ccc-----------
Confidence            3445566666666778899999999999 9999999999999999999999999998 444444  321           


Q ss_pred             CccchhccccchHhHHHHHHHhcCChhhHHHHhhcCCcccCCCCHHHHHHHHHhhccccccccccc
Q 003864          686 FARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGELLSCGFTLSEVQCNLFSRYFCWVLNSCYV  751 (790)
Q Consensus       686 ~~~~~~~~vpsW~Kf~~L~~iL~asL~dI~~~W~~G~ll~~~Fs~~Ev~~LIkAlF~~~~~~~~~~  751 (790)
                        ..+++|||+|+||+||++||++||+||++||++|++ + +|+++||++||||+|+++++|.+++
T Consensus       284 --~~i~~Yv~~W~Kf~~L~~IL~ssLkDI~~lW~eGeL-~-~FstdEVv~LIrALFaDT~~Rr~aI  345 (357)
T 3k8p_C          284 --NLIETYRHSREKLGILSKILTAHLKDILEMFYEGEF-F-LFETDEIVQWIILLFADTPTRRDCI  345 (357)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTTGG-G-GSCHHHHHHHHHHHSCCCHHHHHHH
T ss_pred             --ccHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCc-c-eecHHHHHHHHHHHCcCCHHHHHHH
Confidence              135799999999999999999999999999999998 4 9999999999999999999999875

PyMOL of 3k8p

>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}	Back alignment and structure

>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens}	Back alignment and structure

>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2	Back alignment and structure

>3etv_A Protein transport protein TIP20,linker,protein transport protein DSL1; TIP20P-DSL1P complex, endoplasmic reticulum, ER-golgi transport; 1.94A {Saccharomyces cerevisiae} PDB: 3etu_A	Back alignment and structure

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		790
d2d2sa1		229	Exocyst complex component EXO84 {Baker's yeast (Sa	92.97

>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.97  E-value=2.1  Score=40.90  Aligned_cols=100  Identities=19%  Similarity=0.201  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhhcCCCC--CChhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 003864          121 VRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDEN--ASEPLVYGLLRKEWLVCFEEIQELLVKFVESAVRF  198 (790)
Q Consensus       121 l~~l~~i~~~L~~~~~~l~~~~l~~A~~~L~~l~~~l~~~~~~--~~~~~I~~~L~~~~~~l~~~i~~~L~~~w~~lv~~  198 (790)
                      -+.++.+...+++.+-.+.+++|.+|++.+++.+..+...+..  ..+..+...++.++.+.++.+.++|...-.     
T Consensus         6 ~~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l~-----   80 (229)
T d2d2sa1           6 AQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSIL-----   80 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred             HhhhhhHhcccHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence            3578999999999999999999999999999999998877532  233445566888888888888888865332     


Q ss_pred             ccCCCeEEEEEEeecCCCCcccHHHHHHHHHHhhhhhHHHHH
Q 003864          199 EKESNRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAK  240 (790)
Q Consensus       199 ~~~~~~i~v~~~i~~~~~~~~~L~~vl~AL~~lg~l~~~l~~  240 (790)
                       ++ +             +...+..++..|.+||.-+..-..
T Consensus        81 -~~-~-------------~~~~~~~~v~~L~rLg~~~~A~~l  107 (229)
T d2d2sa1          81 -SS-N-------------EIVHLKSGTENMIKLGLPEQALDL  107 (229)
T ss_dssp             -TC-S-------------SHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             -hc-C-------------ChHHHHHHHHHHHHcCCchHHHHH
Confidence             11 0             124677889999999876664444

PyMOL of d2d2sa1