Citrus Sinensis ID: 003870
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 790 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LXX6 | 790 | Probable exocyst complex | yes | no | 0.998 | 0.998 | 0.787 | 0.0 | |
| Q9Y2D4 | 811 | Exocyst complex component | yes | no | 0.860 | 0.838 | 0.254 | 1e-68 | |
| A6H5Z3 | 810 | Exocyst complex component | yes | no | 0.860 | 0.839 | 0.255 | 1e-68 | |
| O54923 | 804 | Exocyst complex component | no | no | 0.925 | 0.909 | 0.253 | 3e-66 | |
| Q8TAG9 | 804 | Exocyst complex component | no | no | 0.901 | 0.885 | 0.251 | 9e-66 | |
| Q8R313 | 802 | Exocyst complex component | no | no | 0.922 | 0.908 | 0.253 | 3e-64 | |
| E2R766 | 803 | Exocyst complex component | no | no | 0.901 | 0.886 | 0.250 | 1e-63 | |
| Q54B27 | 1025 | Exocyst complex component | yes | no | 0.941 | 0.725 | 0.255 | 4e-62 | |
| Q9VDE6 | 766 | Exocyst complex component | yes | no | 0.927 | 0.956 | 0.248 | 4e-58 | |
| Q18286 | 817 | Exocyst complex component | yes | no | 0.929 | 0.898 | 0.234 | 5e-52 |
| >sp|Q9LXX6|EXOC6_ARATH Probable exocyst complex component 6 OS=Arabidopsis thaliana GN=At3g56640 PE=3 SV=2 | Back alignment and function desciption |
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Score = 1310 bits (3389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/790 (78%), Positives = 722/790 (91%), Gaps = 1/790 (0%)
Query: 1 MDAKTKRRIVTENGDTTGEDLVLATLIGNGDDLGPIVRHAFETGRPEALLHQLKSVVRKK 60
M+AK KRRIVTENGDT GEDLVLATLIGNGDD+GP+VRHAFE GRPE L+HQLK+V RKK
Sbjct: 2 MEAKPKRRIVTENGDT-GEDLVLATLIGNGDDVGPLVRHAFEMGRPEPLVHQLKNVARKK 60
Query: 61 EAEIEELCKTHYEEFILAVDELRGVLVDAEELKSDLSSDNYRLQEVGSALLIKLEELLES 120
EAEIE+LCKTHYEEFI+AVDELRGVLVDAEELKSDL+SDN+RLQEVGSALL+KLEELLES
Sbjct: 61 EAEIEDLCKTHYEEFIVAVDELRGVLVDAEELKSDLASDNFRLQEVGSALLVKLEELLES 120
Query: 121 YAIKKNVTGAIKMGKICVQVLDLCVKCNNHITDGQFYPALKTIDLIEKNYLQIIPVKALK 180
YA+KKNVT AIKM KICVQ L+LCVKCN++I++GQFY ALKT+DLIEK+YL++IP+K LK
Sbjct: 121 YAVKKNVTEAIKMSKICVQALELCVKCNSYISEGQFYHALKTMDLIEKSYLKLIPLKVLK 180
Query: 181 MVIEKTIPVIKTHIEKKVTSQFNEWLVHVRSSAKDIGQTAIGRAASARQRDEEMLDRQRK 240
+VIE+ IPVIKTHIEKKV SQFNEWLVH+RSS+K+IGQTAIG ASARQR+EEML+RQR+
Sbjct: 181 LVIERRIPVIKTHIEKKVCSQFNEWLVHIRSSSKNIGQTAIGLTASARQREEEMLERQRR 240
Query: 241 AEEQNLSGFGDFSFTLEVEDIDEDSVLKFDLTPLYRAYHIHTCLGIPSQFREYYYRNRLL 300
AEEQN G G+ ++TL+VED ++DSVLKFDLTPLYRAYHIHT LG+P +FR+YYY NRLL
Sbjct: 241 AEEQNTGGLGELAYTLDVEDSEQDSVLKFDLTPLYRAYHIHTILGVPERFRDYYYENRLL 300
Query: 301 QLTSDLQISSVQPFVESYQTFLAQIAGYFIVEDRVLRTAGGLLLPDQLETMWETAVAKIT 360
QL SDLQI+ QPFVESYQTFLAQ+AGYFIVEDRV+RTAG LL DQ+ETMWETA++KI
Sbjct: 301 QLQSDLQITYTQPFVESYQTFLAQVAGYFIVEDRVIRTAGDFLLADQVETMWETAISKIV 360
Query: 361 SVLEEQFSHMDSATHLLLVKDYVTLLGATLRQYGYEVGPVLEVLDKSQDKYHELLLEECQ 420
++LE QF+ MDS THLLLVKDYVTLLG TLRQYGYEVGPVL+ LDKS+DKYHELLLEEC+
Sbjct: 361 AILENQFARMDSPTHLLLVKDYVTLLGTTLRQYGYEVGPVLDALDKSRDKYHELLLEECR 420
Query: 421 QQITTVLTNDTYEQMLMKKDTDYENNVLLFHLQSSDIMPAFPYIAPFSSMVPDACRIVRS 480
+QI T +T DTY+QM++KK+ DYENNVL F+LQ+SDIMPAF YIAPFSSMVPD CRI+RS
Sbjct: 421 KQIVTAITEDTYQQMVIKKEADYENNVLSFNLQTSDIMPAFTYIAPFSSMVPDVCRIIRS 480
Query: 481 FIKGSVDYLSYGMHANYFDVLRKYLDKLLIDVLNEVILNTITGGSIGVSQAMQIAANITF 540
+IKGSVDYLSYG++ N+F VLRKYLDK+LIDVLNEVIL TI+ SIGVSQAMQIAANI+F
Sbjct: 481 YIKGSVDYLSYGVNTNFFSVLRKYLDKILIDVLNEVILETISNNSIGVSQAMQIAANISF 540
Query: 541 LERACDYFLRHAAQLCGIPVRSVQKPQATLMAKVVLKTSRDAAYITLLNLVNTKLDEFMA 600
LE+A DYFLRHAAQLCGIP RSV++PQA+L AKVVLKTSRDAAY+ LLN+VNTKLDEFM
Sbjct: 541 LEKASDYFLRHAAQLCGIPSRSVERPQASLAAKVVLKTSRDAAYLALLNVVNTKLDEFMK 600
Query: 601 LTENINWTTEDTSQNGNEYMNEVIIYLDTLMSTAQQILPLDALYKVGSGALEHISNSIVS 660
LTEN+NWTTE+ Q +EY+NEV+IYL+T+MSTAQQILP+DALYKVG GA+EHISNSIVS
Sbjct: 601 LTENVNWTTEEMPQGPHEYINEVVIYLETVMSTAQQILPMDALYKVGVGAIEHISNSIVS 660
Query: 661 AFLSDSVKRFNANAVAIINHDLKKLEDFSDEKFHITGLSEINPEGSFRRCLVEARQLINL 720
FLSDS+KRFNANAV+ INHDL+ +E+F+DE++H +GL+EI EGSFR LVEARQLINL
Sbjct: 661 TFLSDSIKRFNANAVSAINHDLRVIENFADERYHSSGLNEIYKEGSFRSYLVEARQLINL 720
Query: 721 LISSQPENFMNPVIREKNYNALDYKKVASICEKFKDSPDGIFGSLSSRNTKQSSRKKSMD 780
L SSQPENFMNPVIRE+NYN LDYKKVA+ICEKFKDS DGIFGSL++RNTK +++KKSMD
Sbjct: 721 LSSSQPENFMNPVIRERNYNTLDYKKVATICEKFKDSADGIFGSLANRNTKLTAKKKSMD 780
Query: 781 MLKRRLKDFN 790
MLK+RLK+FN
Sbjct: 781 MLKKRLKEFN 790
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Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9Y2D4|EXC6B_HUMAN Exocyst complex component 6B OS=Homo sapiens GN=EXOC6B PE=1 SV=3 | Back alignment and function description |
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| >sp|A6H5Z3|EXC6B_MOUSE Exocyst complex component 6B OS=Mus musculus GN=Exoc6b PE=2 SV=1 | Back alignment and function description |
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| >sp|O54923|EXOC6_RAT Exocyst complex component 6 OS=Rattus norvegicus GN=Exoc6 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q8TAG9|EXOC6_HUMAN Exocyst complex component 6 OS=Homo sapiens GN=EXOC6 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q8R313|EXOC6_MOUSE Exocyst complex component 6 OS=Mus musculus GN=Exoc6 PE=1 SV=2 | Back alignment and function description |
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| >sp|E2R766|EXOC6_CANFA Exocyst complex component 6 OS=Canis familiaris GN=EXOC6 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q54B27|EXOC6_DICDI Exocyst complex component 6 OS=Dictyostelium discoideum GN=exoc6 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9VDE6|EXOC6_DROME Exocyst complex component 6 OS=Drosophila melanogaster GN=sec15 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q18286|EXOC6_CAEEL Exocyst complex component 6 OS=Caenorhabditis elegans GN=sec-15 PE=3 SV=4 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 790 | ||||||
| 255570480 | 789 | sec15, putative [Ricinus communis] gi|22 | 0.998 | 1.0 | 0.821 | 0.0 | |
| 224089921 | 789 | predicted protein [Populus trichocarpa] | 0.998 | 1.0 | 0.812 | 0.0 | |
| 147864200 | 789 | hypothetical protein VITISV_039681 [Viti | 0.998 | 1.0 | 0.801 | 0.0 | |
| 225440157 | 789 | PREDICTED: probable exocyst complex comp | 0.998 | 1.0 | 0.801 | 0.0 | |
| 449437696 | 789 | PREDICTED: probable exocyst complex comp | 0.998 | 1.0 | 0.798 | 0.0 | |
| 7594542 | 789 | putative protein [Arabidopsis thaliana] | 0.998 | 1.0 | 0.787 | 0.0 | |
| 334186022 | 790 | putative exocyst complex component 6 [Ar | 0.998 | 0.998 | 0.787 | 0.0 | |
| 297816986 | 789 | hypothetical protein ARALYDRAFT_907112 [ | 0.998 | 1.0 | 0.787 | 0.0 | |
| 449517931 | 784 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.991 | 0.998 | 0.794 | 0.0 | |
| 449445888 | 789 | PREDICTED: probable exocyst complex comp | 0.997 | 0.998 | 0.750 | 0.0 |
| >gi|255570480|ref|XP_002526198.1| sec15, putative [Ricinus communis] gi|223534476|gb|EEF36177.1| sec15, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1346 bits (3484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/790 (82%), Positives = 724/790 (91%), Gaps = 1/790 (0%)
Query: 1 MDAKTKRRIVTENGDTTGEDLVLATLIGNGDDLGPIVRHAFETGRPEALLHQLKSVVRKK 60
MDAK KRR V ENGD GEDLVLATLIGNGDDLGPIVRH FE GRPE+LLHQLK VV+KK
Sbjct: 1 MDAKPKRRTVVENGDG-GEDLVLATLIGNGDDLGPIVRHVFEMGRPESLLHQLKGVVKKK 59
Query: 61 EAEIEELCKTHYEEFILAVDELRGVLVDAEELKSDLSSDNYRLQEVGSALLIKLEELLES 120
EAEIE+LCK+HYEEFILAVDELRGVLVDAEELKS+L+SDN+RLQEVGSALLIKLEELLES
Sbjct: 60 EAEIEDLCKSHYEEFILAVDELRGVLVDAEELKSELASDNFRLQEVGSALLIKLEELLES 119
Query: 121 YAIKKNVTGAIKMGKICVQVLDLCVKCNNHITDGQFYPALKTIDLIEKNYLQIIPVKALK 180
Y+IKKNVT AIKM KIC+QVL+LC KCN H+++GQFYPALKT+DLIEKNYLQ IPVK L+
Sbjct: 120 YSIKKNVTEAIKMSKICLQVLELCAKCNGHMSEGQFYPALKTVDLIEKNYLQNIPVKTLR 179
Query: 181 MVIEKTIPVIKTHIEKKVTSQFNEWLVHVRSSAKDIGQTAIGRAASARQRDEEMLDRQRK 240
M IEKTIPVIK+HIEKKVTSQFNEWLV +RSSAKDIGQTAIG +ASARQRDEEML+ QRK
Sbjct: 180 MTIEKTIPVIKSHIEKKVTSQFNEWLVLLRSSAKDIGQTAIGHSASARQRDEEMLEHQRK 239
Query: 241 AEEQNLSGFGDFSFTLEVEDIDEDSVLKFDLTPLYRAYHIHTCLGIPSQFREYYYRNRLL 300
AEEQN+SG GDF +TL+VE++DEDS+LKFDLTPLYRAYHIH CLG QFREYYYRNRLL
Sbjct: 240 AEEQNVSGLGDFVYTLDVEELDEDSILKFDLTPLYRAYHIHACLGTQEQFREYYYRNRLL 299
Query: 301 QLTSDLQISSVQPFVESYQTFLAQIAGYFIVEDRVLRTAGGLLLPDQLETMWETAVAKIT 360
QL SDLQIS QPFVESYQT+LAQIAGYFIVEDRVLRT GGLLL DQ+ETMWETAV KIT
Sbjct: 300 QLNSDLQISPSQPFVESYQTYLAQIAGYFIVEDRVLRTGGGLLLTDQVETMWETAVTKIT 359
Query: 361 SVLEEQFSHMDSATHLLLVKDYVTLLGATLRQYGYEVGPVLEVLDKSQDKYHELLLEECQ 420
S+LEEQFS MDSATHLLLVKDY+TLLGATL YGY+VG +LEV+D S+DKYH LLL EC+
Sbjct: 360 SILEEQFSRMDSATHLLLVKDYITLLGATLGHYGYDVGQILEVVDNSRDKYHGLLLGECR 419
Query: 421 QQITTVLTNDTYEQMLMKKDTDYENNVLLFHLQSSDIMPAFPYIAPFSSMVPDACRIVRS 480
+QI VL NDTYEQM+MKKDTDYENNVL F LQ++DIMPAFPYIAPFSSMVPDACRIVRS
Sbjct: 420 EQIVNVLGNDTYEQMVMKKDTDYENNVLSFSLQTTDIMPAFPYIAPFSSMVPDACRIVRS 479
Query: 481 FIKGSVDYLSYGMHANYFDVLRKYLDKLLIDVLNEVILNTITGGSIGVSQAMQIAANITF 540
FIKGSVDYLSY +H N++DV++KYLDK LIDVLNEVIL+TI G++GVSQAMQIAANI+
Sbjct: 480 FIKGSVDYLSYRLHTNFYDVVKKYLDKFLIDVLNEVILSTIHSGAVGVSQAMQIAANISV 539
Query: 541 LERACDYFLRHAAQLCGIPVRSVQKPQATLMAKVVLKTSRDAAYITLLNLVNTKLDEFMA 600
LERACD+FLRHAAQLCGIPVRSV++P+A L AKVVLKTSRDAAY+ LLNLVNTKLDEFMA
Sbjct: 540 LERACDFFLRHAAQLCGIPVRSVERPKAVLTAKVVLKTSRDAAYLALLNLVNTKLDEFMA 599
Query: 601 LTENINWTTEDTSQNGNEYMNEVIIYLDTLMSTAQQILPLDALYKVGSGALEHISNSIVS 660
LTENINWT+E+ SQNG+EY+NEV+IYLDTL+STAQQILPLDALYKVGSGALEHISNSIV+
Sbjct: 600 LTENINWTSEEQSQNGSEYINEVVIYLDTLLSTAQQILPLDALYKVGSGALEHISNSIVA 659
Query: 661 AFLSDSVKRFNANAVAIINHDLKKLEDFSDEKFHITGLSEINPEGSFRRCLVEARQLINL 720
AFLSDS+KR+NANAV+ +N+DL LE+F+DE+FH TGLSEI EG+FR CL+EARQLINL
Sbjct: 660 AFLSDSIKRYNANAVSALNNDLAMLENFADERFHSTGLSEIYKEGTFRGCLIEARQLINL 719
Query: 721 LISSQPENFMNPVIREKNYNALDYKKVASICEKFKDSPDGIFGSLSSRNTKQSSRKKSMD 780
L SSQ ENFMNPVIRE+NYN LD+KKVA I EKFKDSPDGIFGSLS+RNTKQS+RKKS+D
Sbjct: 720 LSSSQAENFMNPVIRERNYNTLDHKKVACIVEKFKDSPDGIFGSLSNRNTKQSARKKSLD 779
Query: 781 MLKRRLKDFN 790
LKRRLK+ N
Sbjct: 780 ALKRRLKELN 789
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224089921|ref|XP_002308866.1| predicted protein [Populus trichocarpa] gi|222854842|gb|EEE92389.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|147864200|emb|CAN83025.1| hypothetical protein VITISV_039681 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225440157|ref|XP_002277968.1| PREDICTED: probable exocyst complex component 6 [Vitis vinifera] gi|297741688|emb|CBI32820.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449437696|ref|XP_004136627.1| PREDICTED: probable exocyst complex component 6-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|7594542|emb|CAB88067.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|334186022|ref|NP_191223.2| putative exocyst complex component 6 [Arabidopsis thaliana] gi|334302789|sp|Q9LXX6.2|EXOC6_ARATH RecName: Full=Probable exocyst complex component 6; AltName: Full=Exocyst complex component Sec15 gi|332646026|gb|AEE79547.1| putative exocyst complex component 6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297816986|ref|XP_002876376.1| hypothetical protein ARALYDRAFT_907112 [Arabidopsis lyrata subsp. lyrata] gi|297322214|gb|EFH52635.1| hypothetical protein ARALYDRAFT_907112 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|449517931|ref|XP_004165997.1| PREDICTED: LOW QUALITY PROTEIN: probable exocyst complex component 6-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449445888|ref|XP_004140704.1| PREDICTED: probable exocyst complex component 6-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 790 | ||||||
| UNIPROTKB|F1MIR2 | 811 | EXOC6B "Uncharacterized protei | 0.653 | 0.636 | 0.25 | 1.4e-68 | |
| MGI|MGI:1923164 | 810 | Exoc6b "exocyst complex compon | 0.656 | 0.640 | 0.249 | 1.4e-68 | |
| UNIPROTKB|Q9Y2D4 | 811 | EXOC6B "Exocyst complex compon | 0.656 | 0.639 | 0.249 | 2e-68 | |
| ZFIN|ZDB-GENE-040426-2511 | 810 | exoc6 "exocyst complex compone | 0.934 | 0.911 | 0.254 | 2.7e-68 | |
| UNIPROTKB|F1PSU4 | 811 | EXOC6B "Uncharacterized protei | 0.656 | 0.639 | 0.249 | 2.9e-68 | |
| MGI|MGI:1351611 | 802 | Exoc6 "exocyst complex compone | 0.931 | 0.917 | 0.257 | 1.9e-67 | |
| FB|FBgn0038856 | 766 | sec15 "sec15" [Drosophila mela | 0.930 | 0.959 | 0.260 | 4.8e-62 | |
| UNIPROTKB|J3QT38 | 681 | EXOC6B "Exocyst complex compon | 0.465 | 0.540 | 0.277 | 5.1e-62 | |
| UNIPROTKB|Q8TAG9 | 804 | EXOC6 "Exocyst complex compone | 0.921 | 0.905 | 0.242 | 8.1e-60 | |
| UNIPROTKB|F1NZL5 | 774 | EXOC6B "Uncharacterized protei | 0.670 | 0.684 | 0.241 | 1.3e-59 |
| UNIPROTKB|F1MIR2 EXOC6B "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 489 (177.2 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 137/548 (25%), Positives = 263/548 (47%)
Query: 256 LEVEDIDEDSVLK-----FDLTPLYRAYHIHTCLGIPSQFREYYYRNRLLQLTSDLQI-S 309
L+VED ++D + D +P+YR HI++ LG F YY + R Q LQ S
Sbjct: 272 LDVEDEEDDEEVPGAQDLVDFSPVYRCLHIYSVLGARETFENYYRKQRRKQARLVLQPPS 331
Query: 310 SVQPFVESYQTFLAQIAGYFIVEDRVLRTAGGLLLPDQLETMWETAVAKITSVLEEQFSH 369
++ ++ Y+ + QI G+F+VED +L T GL+ ++ +WE A++K + L S+
Sbjct: 332 NMHETLDGYRKYFNQIVGFFVVEDHILHTTQGLVNRAYIDELWEMALSKTIAALRTHSSY 391
Query: 370 MDSATHLLLVKDYVTLLGATLRQYGYEVGPVLEVLDKSQDKYHELLLEECQQQITTVLTN 429
+L +K+ + L TL+ YG+ V + ++L + +D+Y E LL++ +L +
Sbjct: 392 CSDPNLVLDLKNLIVLFADTLQVYGFPVNQLFDMLLEIRDQYSETLLKKWSGIFRNILDS 451
Query: 430 DTYEQMLMKKDTDYENNVLLFHLQSSDI-MPAFPYIAPFSSMVPDACRIVRSFIKGSVDY 488
D Y + + + Y+ + F Q +++ FP PFS VP ++ FI + +
Sbjct: 452 DNYSPIPVTSEEMYKKVIGQFPFQDAELEKQPFPKKFPFSEFVPKVYNQIKEFIYACLKF 511
Query: 489 LSYGMHANYF---DVLRKYLDKLLIDVLNEVILNTITGGSIGVSQAMQIAANITFLERAC 545
S +H + D++RK + LL L+ + N I +IG+++ +QI N T LE++C
Sbjct: 512 -SEDLHLSSTEVDDMIRKSTNLLLTRTLSNSLQNVIKRKNIGLTELVQIIINTTHLEKSC 570
Query: 546 DYFLRHAAQLCGIPVRSVQKPQATLMAKVVLKTSRDAAYITLLNLVNTKLDEFMALTENI 605
Y + + +V + L K +R AA + +N K+D+F+ L +
Sbjct: 571 KYLEEFITNITNVLPETVHTTK--LYGTTTFKDARHAAEEEIYTNLNQKIDQFLQLAD-Y 627
Query: 606 NWTTEDTSQNGNEYMNEVIIYLDTLMSTAQQILPLDALYKVGSGALEHISNSIVSAFLSD 665
+W T D ++Y+ ++I +L + + LP A +H++ S++ L
Sbjct: 628 DWMTGDLGSKASDYLVDLIAFLRSTFAVFTH-LPGKVAQTACMSACKHLATSLMQLLLEA 686
Query: 666 SVKRFNANAVAIINHDLKKLEDFSDEKFHITGLSEINPEGSFRRCLVEARQLINLLI--- 722
V++ A+ N D+++ E F+ + G E + +F ++ RQL++L I
Sbjct: 687 EVRQLTLGALQQFNLDVRECEQFA-RSGPVPGFQEDTLQLAF----IDLRQLLDLFIQWD 741
Query: 723 -SSQPENFMNPVIREKNYNALDYKKVASICEKFKDSP--DGIFGSLSSRNTKQSSRKKSM 779
S+ ++ P + N + ++ EK KD+ + +F +N + ++K +
Sbjct: 742 WSTYLADYGQPTCKYLRVNPVT---ALTLLEKMKDTSRKNNMFAQFR-KNERD--KQKLI 795
Query: 780 DMLKRRLK 787
D + ++L+
Sbjct: 796 DTVAKQLR 803
|
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| MGI|MGI:1923164 Exoc6b "exocyst complex component 6B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9Y2D4 EXOC6B "Exocyst complex component 6B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-2511 exoc6 "exocyst complex component 6" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PSU4 EXOC6B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| MGI|MGI:1351611 Exoc6 "exocyst complex component 6" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| FB|FBgn0038856 sec15 "sec15" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J3QT38 EXOC6B "Exocyst complex component 6B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8TAG9 EXOC6 "Exocyst complex component 6" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NZL5 EXOC6B "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9LXX6 | EXOC6_ARATH | No assigned EC number | 0.7873 | 0.9987 | 0.9987 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 790 | |||
| pfam04091 | 311 | pfam04091, Sec15, Exocyst complex subunit Sec15-li | 1e-107 |
| >gnl|CDD|217888 pfam04091, Sec15, Exocyst complex subunit Sec15-like | Back alignment and domain information |
|---|
Score = 330 bits (849), Expect = e-107
Identities = 115/319 (36%), Positives = 168/319 (52%), Gaps = 13/319 (4%)
Query: 442 DYEN--NVLLFH-LQSSDIMPAFPYIAPFSSMVPDACRIVRSFIKGSVDYLSYG-MHANY 497
+YE V + S +P FP PFS M P C +RSFI +L
Sbjct: 1 EYEKVLKVCWYKPEDPSLEVPPFPKTFPFSPMYPLCCTQIRSFINQFYKFLDDLYQEPTE 60
Query: 498 FD-VLRKYLDKLLIDVLNEVILNTITGGSIGVSQAMQIAANITFLERACDYFLRHAAQLC 556
+ ++RK LD+LLIDV+N+ +L + S+ + Q +QI N+ + E+ACD + AQL
Sbjct: 61 INEIVRKSLDRLLIDVVNDCLLERLDSTSLNLEQIVQILINLEYFEKACDELEKLLAQLR 120
Query: 557 GIPVRSVQKPQATLMAKVVLKTSRDAAYITLLNLVNTKLDEFMALTENINWTTEDTSQNG 616
IP +L A K++R AA + LVN+K+D+F+ +WT +
Sbjct: 121 NIPQSIG--GPISLAATKKFKSARKAAEKRIFELVNSKIDDFL-ELAEYDWTPTEPPDEP 177
Query: 617 NEYMNEVIIYLDTLMSTAQQILPLDALYKVGSGALEHISNSIVSAFLSDSVKRFNANAVA 676
++Y+ ++ +L+T+ S+ LP + V A +HIS SI+ LSD VKR N NAVA
Sbjct: 178 SDYIQDLATFLETIFSSTLLNLPYEIKTLVYFRAFDHISESILDLLLSDEVKRINTNAVA 237
Query: 677 IINHDLKKLEDFSDEKFHITGLSEINPEGSFRRCLVEARQLINLLISSQPENFMNPVIRE 736
+ D+K LE F+D E N EGS R E RQLI+LL+S PE FM+P IR
Sbjct: 238 NFDLDVKYLESFADSL-----PVEGNGEGSLRSTFDELRQLIDLLLSDNPEEFMDPSIRM 292
Query: 737 KNYNALDYKKVASICEKFK 755
+ YN +D +K A + EK +
Sbjct: 293 RKYNRVDPEKAAILLEKLQ 311
|
Length = 311 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 790 | |||
| KOG2176 | 800 | consensus Exocyst complex, subunit SEC15 [Intracel | 100.0 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 100.0 | |
| PF10191 | 766 | COG7: Golgi complex component 7 (COG7); InterPro: | 99.45 | |
| PF06248 | 593 | Zw10: Centromere/kinetochore Zw10; InterPro: IPR00 | 98.39 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 98.32 | |
| PF10475 | 291 | DUF2450: Protein of unknown function N-terminal do | 98.32 | |
| PF15469 | 182 | Sec5: Exocyst complex component Sec5 | 98.13 | |
| PF04048 | 142 | Sec8_exocyst: Sec8 exocyst complex component speci | 97.99 | |
| PF10392 | 132 | COG5: Golgi transport complex subunit 5; InterPro: | 97.89 | |
| PF07393 | 710 | Sec10: Exocyst complex component Sec10; InterPro: | 97.79 | |
| PF06148 | 133 | COG2: COG (conserved oligomeric Golgi) complex com | 97.57 | |
| KOG0412 | 773 | consensus Golgi transport complex COD1 protein [In | 97.21 | |
| KOG3691 | 982 | consensus Exocyst complex subunit Sec8 [Intracellu | 97.17 | |
| PF08700 | 87 | Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te | 96.95 | |
| KOG2176 | 800 | consensus Exocyst complex, subunit SEC15 [Intracel | 96.92 | |
| KOG2347 | 934 | consensus Sec5 subunit of exocyst complex [Intrace | 96.83 | |
| PF04100 | 383 | Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007 | 96.48 | |
| PF10474 | 234 | DUF2451: Protein of unknown function C-terminus (D | 96.42 | |
| PF04124 | 338 | Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 | 96.41 | |
| KOG2307 | 705 | consensus Low density lipoprotein receptor [Intrac | 95.6 | |
| PF06046 | 566 | Sec6: Exocyst complex component Sec6; InterPro: IP | 95.24 | |
| PF01843 | 105 | DIL: DIL domain; InterPro: IPR018444 Dilute encode | 95.04 | |
| KOG2180 | 793 | consensus Late Golgi protein sorting complex, subu | 93.69 | |
| PF12022 | 125 | DUF3510: Domain of unknown function (DUF3510); Int | 91.22 | |
| KOG2211 | 797 | consensus Predicted Golgi transport complex 1 prot | 91.18 | |
| PF06419 | 618 | COG6: Conserved oligomeric complex COG6; InterPro: | 88.28 | |
| KOG2033 | 863 | consensus Low density lipoprotein B-like protein [ | 83.49 | |
| PF14923 | 450 | CCDC142: Coiled-coil protein 142 | 81.47 |
| >KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-166 Score=1405.00 Aligned_cols=758 Identities=41% Similarity=0.670 Sum_probs=706.5
Q ss_pred hHHHhhhcCCCchhHHHHHHHhcCChhHHHHHHHHHHHhhHHHHHHHhhhchhHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 003870 21 LVLATLIGNGDDLGPIVRHAFETGRPEALLHQLKSVVRKKEAEIEELCKTHYEEFILAVDELRGVLVDAEELKSDLSSDN 100 (790)
Q Consensus 21 ~~~~~~~~~~d~l~piik~~~~~~~~~~~l~~L~~~i~~kd~eIE~iC~~~yq~Fi~sv~~L~~Vr~~~~~L~~~l~~~n 100 (790)
.++...+-++|.|||++|.+++.|+++.|+++|+.+|+.||.|||+||+.|||||++||+||++||.++.+|++++++.|
T Consensus 21 il~~~estDtd~~gP~lRs~~d~~~~~~~~e~Le~~ir~~d~EIE~lcn~hyQdFidsIdEL~~Vr~daq~Lks~vsd~N 100 (800)
T KOG2176|consen 21 ILLEIESTDTDDWGPTLRSVYDGNQHKPVMEKLENRIRNHDKEIEKLCNFHYQDFIDSIDELLKVRGDAQKLKSQVSDTN 100 (800)
T ss_pred HHHHHhccchhhhhhHHHHHHccCCcchHHHHHHHHHHhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 67776677777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHhhHHHHHHhhcCCCCchHHH
Q 003870 101 YRLQEVGSALLIKLEELLESYAIKKNVTGAIKMGKICVQVLDLCVKCNNHITDGQFYPALKTIDLIEKNYLQIIPVKALK 180 (790)
Q Consensus 101 ~~Lq~s~~~L~~kk~~L~~~r~v~~nI~eai~~L~~cl~VLel~~k~~e~i~ekkyy~ALktLd~Le~~~L~~v~~~~f~ 180 (790)
..||++|++|+.++++|+++|.+++||++|+++++.|+||||+|+||+++|++|+||+||||||.||+.|||.++.|.|+
T Consensus 101 ~rLQ~~g~eLiv~~e~lv~~r~~~rnit~ai~~l~~Cl~vLEl~sK~~e~~s~kqyy~aLktle~lE~~yL~~~~~~~~~ 180 (800)
T KOG2176|consen 101 RRLQESGKELIVKKEDLVRCRTQSRNITEAIELLTLCLPVLELYSKLQEQMSEKQYYPALKTLESLEKVYLPRVSNFRFL 180 (800)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHH-HHHHHHHhhhhccCCCCCcccccccC
Q 003870 181 MVIEKTIPVIKTHIEKKVTSQFNEWLVHVRSSAKDIGQTAIGRAASARQRDEE-MLDRQRKAEEQNLSGFGDFSFTLEVE 259 (790)
Q Consensus 181 ~~i~~sIP~lr~~Ik~~~~~~l~~WL~~IR~~s~~IG~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~e 259 (790)
.+|+.+||.+|+.|+++|++++++||++||++|++||+.|++++.+.|+||++ ...+++..+..+..+.....+.+..+
T Consensus 181 ~~i~~~Ip~ik~~i~~~~~~~~~e~L~~irk~s~~iGq~ai~~~~~ar~r~~~~~~~~~~~~e~~~~~~l~~l~~~~~~e 260 (800)
T KOG2176|consen 181 IVIQNRIPFIKEVIKSKSMSDFREWLENIRKKSPKIGQTAIQQAKEARQRWEEEKFNKQIEAEEQSTGSLAKLAYGLEFE 260 (800)
T ss_pred HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhhccchHHHhhhhhHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999995 44444444444444444444444333
Q ss_pred CcC--cc------------cccccCcchHHHHHHHHHhcCChhHHHHHHHHHhHhhhhccccCCCccch-HHHHHHHHHH
Q 003870 260 DID--ED------------SVLKFDLTPLYRAYHIHTCLGIPSQFREYYYRNRLLQLTSDLQISSVQPF-VESYQTFLAQ 324 (790)
Q Consensus 260 ~~~--e~------------~~~~iDf~Ply~cihI~~~Lg~~e~F~~yY~~~Rr~Q~~l~l~~~~~~~~-~~~l~~yl~~ 324 (790)
+.+ ++ ....|||+|+|||+|||..||.++.|+.||++||+.|+.+++++|.++.+ +++|++|+.+
T Consensus 261 ~d~~~~s~~~~~~~~~~~~~~~~~d~~plyr~~hi~~~Lg~~~~f~~~y~~nr~~q~~~~~q~~~t~~~~l~~~~ty~~~ 340 (800)
T KOG2176|consen 261 EDDEHDSIMIFQDLNELSGAIDKFDFEPLYRCLHIHSVLGLRERFRAYYQMNRRLQADLVLQPPFTQLDSLEGYQTYFNQ 340 (800)
T ss_pred cccccccchhccCcccccchheeecccHHHHHHHHHHHHhhHHHHHHHHHHhHHHhhhcccCCCcchhhHHHHHHHHHHH
Confidence 211 11 24579999999999999999999999999999999999999999876655 8999999999
Q ss_pred HhhHHhhhHHHHhhhCCCCChhhHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHhhhcCCCchhHHHHH
Q 003870 325 IAGYFIVEDRVLRTAGGLLLPDQLETMWETAVAKITSVLEEQFSHMDSATHLLLVKDYVTLLGATLRQYGYEVGPVLEVL 404 (790)
Q Consensus 325 I~GFFvvE~~vl~tt~~l~s~~~vdelW~~~~~kl~~~l~~~~~~~~~~~~ll~iK~~i~lf~~tl~~ygy~v~~L~~~L 404 (790)
|+||||||+||++|+++++|.++|+++|+++|+|+++.|+.++++|++|+++|++||+|+|++.||++|||+|+||+++|
T Consensus 341 i~Gffived~il~t~~~~~s~~~ve~lW~~~i~k~v~~L~~~~s~~~t~~~ll~lKd~i~L~~~tl~~yg~~V~~l~~~l 420 (800)
T KOG2176|consen 341 IAGFFIVEDHILRTTGGFLSYNEVEELWDTAISKLVATLSYQSSRCQTPNHLLKLKDLIVLLGATLENYGFNVEPLYDLL 420 (800)
T ss_pred HhhHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHhHHHHHHHHHHHcCCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCcccccCChHHHHhhhhhccCCCCCCCC-CCCccccCCCchHHHHHHHHHHHH
Q 003870 405 DKSQDKYHELLLEECQQQITTVLTNDTYEQMLMKKDTDYENNVLLFHLQSSDIMP-AFPYIAPFSSMVPDACRIVRSFIK 483 (790)
Q Consensus 405 ~~l~d~Y~elL~~~~~~~f~~il~~D~y~Pm~V~~~eey~~~v~~~~~~~~~~~~-~fP~~lPFS~~vP~~c~~ir~fi~ 483 (790)
.++||+|+++|+++|++.|++++++|+|+||+|+++++|++++..||+++.+..+ |||+++|||+|||+||+++|+||+
T Consensus 421 ~~~rdky~e~LL~~~~~~f~e~l~~D~f~pm~V~~e~~Ye~~v~~fp~~~~e~~~~~Fp~~~pFS~mvP~~c~~~k~fi~ 500 (800)
T KOG2176|consen 421 VEIRDKYHEVLLRKWRKIFREALEKDDFMPMVVKKEEEYEKNVLSFPFQNEELEPLPFPKTFPFSPMVPDVCTQAKKFIY 500 (800)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhhhhcccccccccHHHHhhhhhccccccccccCCCCcccCCCCcCCchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999888777 999999999999999999999999
Q ss_pred HHHHHhccCCc--ccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcChHHHHHHHHhHHHHHHHHHHHHHHHHHHcCCCcc
Q 003870 484 GSVDYLSYGMH--ANYFDVLRKYLDKLLIDVLNEVILNTITGGSIGVSQAMQIAANITFLERACDYFLRHAAQLCGIPVR 561 (790)
Q Consensus 484 ~~~~f~~~~~~--~eide~v~ks~d~lL~~~v~~~L~~~i~~~~~~l~qi~QI~iN~~~le~ac~~~e~~~~~l~~~~~~ 561 (790)
.|++|+++++. .++.+++++.++.++.+.++ +...+..+++|++|++||++|+.+||.||++|..|++..+|++.+
T Consensus 501 ~~v~fls~~~l~~~e~~~~~~~~~~l~l~rs~v--l~~~~~~~~~~lsq~~QI~~n~~~fe~a~~~f~~~a~~~~~~~~~ 578 (800)
T KOG2176|consen 501 ACVKFLSDLVLLETEVLNKIRKDTNLLLTRSLV--LSLTSSLPSLNLSQAMQIAANLDYFEIAADFFLEFACHLNGIPNR 578 (800)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--HHHHHhcccccHHHHHHHHHHHHHHHHhhHHHHHHHHHccCCccc
Confidence 99999997654 56788888889988888887 555555677899999999999999999999999999999999988
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhccccccCCCCCcchhHHHHHHHHHHHHHHHhhhCCHH
Q 003870 562 SVQKPQATLMAKVVLKTSRDAAYITLLNLVNTKLDEFMALTENINWTTEDTSQNGNEYMNEVIIYLDTLMSTAQQILPLD 641 (790)
Q Consensus 562 ~~~~~~~~l~a~~~f~~~r~~Ae~~I~~lv~~KIdeflel~~~yDW~~~~~~~~ps~yi~dli~fL~~~f~s~~~~LP~~ 641 (790)
..+++.+ ...|..+|+.||++++.++++||||||++ .+|||+.+++|++||.||.||+.||++||.+++++||.+
T Consensus 579 ~~e~~~~----s~~l~~sr~~Ae~~l~~~i~~Kid~f~~l-~~~dW~t~e~pq~~~~~i~e~~~yLet~~~s~~q~LP~~ 653 (800)
T KOG2176|consen 579 DAERPSS----STKLLASRKLAETELIELIKLKIDDFLEL-IEYDWTTTEVPQGPSEYINEMLIYLETMFSSALQILPYK 653 (800)
T ss_pred ccccccc----chhhhhhhhhHHHHHHHHHhhhhHHHHHH-hhccccccccCCCccHHHHHHHHHHHHHHHHHHhhCcHH
Confidence 7777654 34466699999999999999999999995 599999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCccccccCHHHHHHHHHHHHHHHHhhhhhcccCCCcccCCcchHHHhhhHHHHHHHHh
Q 003870 642 ALYKVGSGALEHISNSIVSAFLSDSVKRFNANAVAIINHDLKKLEDFSDEKFHITGLSEINPEGSFRRCLVEARQLINLL 721 (790)
Q Consensus 642 v~~~~~~~a~~his~~ll~~Ll~~~vk~in~~al~n~~~Dv~~lE~f~~~~~~~~g~~~~~~~~~L~~~F~ELrQlidLl 721 (790)
+++++|+++|+|||++++++|+|+++|+||++||.||++||.|||+||++- |+||. ..+.+..+|.|+|||+|||
T Consensus 654 v~~~v~~~~~~his~~iv~llldd~ik~is~~Ai~~fnlDv~~lEsfa~~~-p~~~~----~~~~~~~~fielrQlinLL 728 (800)
T KOG2176|consen 654 VAQLVCLRELDHISTSIVGLLLDDSIKQISMGAITNFNLDVNYLESFAASP-PVPPN----QEGVLAKAFIELRQLINLL 728 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHccchhHHHHHHhccCC-CCCCc----ccchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999994 88876 5788999999999999999
Q ss_pred hcCCCccccchhhhcccCCCCChhhHHHHHhhhccCCCCcccccCCccccchhhhhhHHHHHHHhhcCC
Q 003870 722 ISSQPENFMNPVIREKNYNALDYKKVASICEKFKDSPDGIFGSLSSRNTKQSSRKKSMDMLKRRLKDFN 790 (790)
Q Consensus 722 ~s~~~~~y~~~~~R~~kY~rv~~~~~~~lLeK~~~~~~~~f~~~~~~~~~~~~rkk~~~~~~k~l~~~~ 790 (790)
++++|++|++|++|+|+|.||+|.+|+.+|||+++.++++||.+.++..++++++|++||++||||.++
T Consensus 729 ~~~~~e~y~~~~~r~rsY~rl~~~~a~t~lEK~~d~~d~~~~~~~~~~n~~~~k~k~id~~~krlk~~~ 797 (800)
T KOG2176|consen 729 LLSDWETYLNDYGRERSYNRLQPAKAATLLEKFKDSSDGINGLLCSRKNDRSAKKKLIDTVKKRLKEFF 797 (800)
T ss_pred HhcCHHHhhCchhhhhhhhccCHHHHHHHHHHHhcccccCcchhcccccccchhhhhHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999988887777789999999999999874
|
|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis [] | Back alignment and domain information |
|---|
| >PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known | Back alignment and domain information |
|---|
| >PF15469 Sec5: Exocyst complex component Sec5 | Back alignment and domain information |
|---|
| >PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking | Back alignment and domain information |
|---|
| >PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins [] | Back alignment and domain information |
|---|
| >PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex | Back alignment and domain information |
|---|
| >KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi | Back alignment and domain information |
|---|
| >KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] | Back alignment and domain information |
|---|
| >PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known | Back alignment and domain information |
|---|
| >PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 [] | Back alignment and domain information |
|---|
| >KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex | Back alignment and domain information |
|---|
| >PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains | Back alignment and domain information |
|---|
| >KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12022 DUF3510: Domain of unknown function (DUF3510); InterPro: IPR024603 The COG complex comprises eight proteins (COG1-8) and plays critical roles in Golgi structure and function [] | Back alignment and domain information |
|---|
| >KOG2211 consensus Predicted Golgi transport complex 1 protein [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation | Back alignment and domain information |
|---|
| >KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF14923 CCDC142: Coiled-coil protein 142 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 790 | ||||
| 2a2f_X | 325 | Crystal Structure Of Sec15 C-Terminal Domain Length | 7e-12 |
| >pdb|2A2F|X Chain X, Crystal Structure Of Sec15 C-Terminal Domain Length = 325 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster} Length = 325 | Back alignment and structure |
|---|
Score = 278 bits (712), Expect = 2e-87
Identities = 72/336 (21%), Positives = 135/336 (40%), Gaps = 16/336 (4%)
Query: 397 VGPVLEVLDKSQDKYHELLLEECQQQITTVLTNDTYEQMLMKKDTDYENNVLLFHLQSSD 456
V + E+L +D Y+E+LL+ +L + + M+++ +YE + F S
Sbjct: 2 VNILWELLHNMRDHYNEVLLQRWVHVFREILDKEQFLPMVVQNTEEYECIIERFPFHSEQ 61
Query: 457 IMPA-FPYIAPFSSMVPDACRIVRSFIKGSVDYLSYG--MHANYFDVLRKYLDKLLIDVL 513
+ A FP PFS MVP+ + F+ + + ++RK + LL
Sbjct: 62 LENAPFPKKFPFSRMVPEVYHQAKEFMYACMKFAEELTLSPNEVAAMVRKAANLLLTRSF 121
Query: 514 NEVILNTITGGSIGVSQAMQIAANITFLERACDYFLRHAAQLCGIPVRSVQKPQATLMAK 573
+ + SI ++Q +QI + +LE+A + + +
Sbjct: 122 SGCLSVVFRQPSITLTQLIQIIIDTQYLEKAGPFLDEFVCHMTNTERSV------SQTPS 175
Query: 574 VVLKTSRDAAYITLLNLVNTKLDEFMALTENINWTTEDTSQNGNEYMNEVIIYLDTLMST 633
+ +R A + + +K+DEF L+ +W + + ++ ++I YL + +
Sbjct: 176 AMFHVARQDAEKQVGLRICSKIDEFFELSA-YDWLLVEPPGIASAFITDMISYLKSTFDS 234
Query: 634 AQQILPLDALYKVGSGALEHISNSIVSAFLSDSVKRFNANAVAIINHDLKKLEDFSDEKF 693
LP A EHI+ I S + VK+ + A+ IN DL + E F+ +
Sbjct: 235 FAFKLPHIA-QAACRRTFEHIAEKIYSIMYDEDVKQISTGALTQINLDLMQCEFFAASEP 293
Query: 694 HITGLSEINPEGSFRRCLVEARQLINLLISSQPENF 729
EG + + RQL++LLI +
Sbjct: 294 -----VPGLKEGELSKYFLRNRQLLDLLILEHHHHH 324
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 790 | |||
| 2a2f_X | 325 | Exocyst complex component SEC15; all helical struc | 100.0 | |
| 3fhn_A | 706 | Protein transport protein TIP20; TIP20P, vesicle t | 98.11 | |
| 3hr0_A | 263 | COG4; conserved oligomeric golgi complex, intracel | 97.84 | |
| 2fji_1 | 399 | Exocyst complex component SEC6; exocytosis, tandem | 96.84 | |
| 3swh_A | 341 | MUNC13-1, protein UNC-13 homolog A; alpha helical, | 96.25 | |
| 2f6h_X | 419 | Myosin-2, type V myosin; mysoin V, cargo binding, | 96.19 | |
| 3mmi_A | 386 | Myosin-4; globular tail, dilute domain, motor prot | 95.44 | |
| 3n1e_A | 141 | Vacuolar protein sorting-associated protein 54; sp | 91.86 |
| >2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-81 Score=680.27 Aligned_cols=317 Identities=22% Similarity=0.374 Sum_probs=282.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcccccCChHHHHhhhhhccCCCCCCC-CCCCccccCCCchHHHH
Q 003870 397 VGPVLEVLDKSQDKYHELLLEECQQQITTVLTNDTYEQMLMKKDTDYENNVLLFHLQSSDIM-PAFPYIAPFSSMVPDAC 475 (790)
Q Consensus 397 v~~L~~~L~~l~d~Y~elL~~~~~~~f~~il~~D~y~Pm~V~~~eey~~~v~~~~~~~~~~~-~~fP~~lPFS~~vP~~c 475 (790)
|++|+++|+++||+|+++|+++|+++|++|+++|+|+||+|+|++||++++..||+++++.. ++||++||||+|||+||
T Consensus 2 V~~L~~~L~~l~d~Y~elLl~~~~~~f~~il~~D~y~Pm~V~~~eey~~v~~~~~~~~~~~~~~~fP~~lPFS~~vP~~c 81 (325)
T 2a2f_X 2 VNILWELLHNMRDHYNEVLLQRWVHVFREILDKEQFLPMVVQNTEEYECIIERFPFHSEQLENAPFPKKFPFSRMVPEVY 81 (325)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCHHHHHHHHTTSCCCCCCCC----CCCSSSBTHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCHHHHHHHHhcCCCCCcccccCCCCcccCccHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999776643 68999999999999999
Q ss_pred HHHHHHHHHHHHHhcc--CCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcChHHHHHHHHhHHHHHHHHHHHHHHHH
Q 003870 476 RIVRSFIKGSVDYLSY--GMHANYFDVLRKYLDKLLIDVLNEVILNTITGGSIGVSQAMQIAANITFLERACDYFLRHAA 553 (790)
Q Consensus 476 ~~ir~fi~~~~~f~~~--~~~~eide~v~ks~d~lL~~~v~~~L~~~i~~~~~~l~qi~QI~iN~~~le~ac~~~e~~~~ 553 (790)
++||+||++||+|+++ +.++|+||+|||++|+||++++|++|.++|+++++|++|+|||+||++|||.||++|+.+++
T Consensus 82 ~~ir~fi~~~~~F~~~~~~~~~eidd~lrks~d~LL~~~v~~~L~~~i~~~~~~l~qi~Qi~iNl~~le~ac~~le~~l~ 161 (325)
T 2a2f_X 82 HQAKEFMYACMKFAEELTLSPNEVAAMVRKAANLLLTRSFSGCLSVVFRQPSITLTQLIQIIIDTQYLEKAGPFLDEFVC 161 (325)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999996 45689999999999999999999999999999889999999999999999999999999999
Q ss_pred HHcCCCccccCCccchhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhccccccCCCCCcchhHHHHHHHHHHHHHH
Q 003870 554 QLCGIPVRSVQKPQATLMAKVVLKTSRDAAYITLLNLVNTKLDEFMALTENINWTTEDTSQNGNEYMNEVIIYLDTLMST 633 (790)
Q Consensus 554 ~l~~~~~~~~~~~~~~l~a~~~f~~~r~~Ae~~I~~lv~~KIdeflel~~~yDW~~~~~~~~ps~yi~dli~fL~~~f~s 633 (790)
+.+|.+.+ .+++|++.|+++|++||++|+++|++||||||+ +++|||+|++++++||+||.|++.||++||++
T Consensus 162 ~~~~~~~~------~~l~a~~~f~~~r~~Ae~~I~~~v~~KIDdfl~-la~yDW~~~~~~~~ps~yi~dli~fL~~~f~s 234 (325)
T 2a2f_X 162 HMTNTERS------VSQTPSAMFHVARQDAEKQVGLRICSKIDEFFE-LSAYDWLLVEPPGIASAFITDMISYLKSTFDS 234 (325)
T ss_dssp HHHTCCC-------------CCSCCCTTHHHHHHHHHHHHHHHHHHT-TCCTTCC----CCSCCHHHHHHHHHHHHHHHT
T ss_pred HHhCCCcc------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccCCCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 99987642 247799999999999999999999999999998 79999999999999999999999999999995
Q ss_pred HhhhCCHHHHHHHHHHHHHHHHHHHHhhccCccccccCHHHHHHHHHHHHHHHHhhhhhcccCCCcccCCcchHHHhhhH
Q 003870 634 AQQILPLDALYKVGSGALEHISNSIVSAFLSDSVKRFNANAVAIINHDLKKLEDFSDEKFHITGLSEINPEGSFRRCLVE 713 (790)
Q Consensus 634 ~~~~LP~~v~~~~~~~a~~his~~ll~~Ll~~~vk~in~~al~n~~~Dv~~lE~f~~~~~~~~g~~~~~~~~~L~~~F~E 713 (790)
+.+||+++++.+||+||+|||++||++|++++||+||++||+||++||+|||+||+++ |++|+ +.++|+++|+|
T Consensus 235 -l~~LP~~v~~~~~~~a~~his~~l~~~Ll~~~vk~in~~av~~~~~Dv~~lE~fa~~~-~v~~l----~~~~L~~~F~e 308 (325)
T 2a2f_X 235 -FAFKLPHIAQAACRRTFEHIAEKIYSIMYDEDVKQISTGALTQINLDLMQCEFFAASE-PVPGL----KEGELSKYFLR 308 (325)
T ss_dssp -TTTTSHHHHHHHHHHHHHHHHHHHHHHHTC------CCTTHHHHHHHHHHHHHHHTTC-SSSSC----CSSTTGGGGHH
T ss_pred -HHcCCHHHHHHHHHHHHHHHHHHHHHHhcCcchhhcCHHHHHHHHHHHHHHHHHHHhC-CCCCc----ccchHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999998 88888 57899999999
Q ss_pred HHHHHHHhhcCCC
Q 003870 714 ARQLINLLISSQP 726 (790)
Q Consensus 714 LrQlidLl~s~~~ 726 (790)
||||+|||+++..
T Consensus 309 LrQli~Ll~~~~~ 321 (325)
T 2a2f_X 309 NRQLLDLLILEHH 321 (325)
T ss_dssp HHHHHHHHHCC--
T ss_pred HHHHHHHHHhhhc
Confidence 9999999999864
|
| >3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00