Citrus Sinensis ID: 004092
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 774 | ||||||
| 224127812 | 990 | predicted protein [Populus trichocarpa] | 0.983 | 0.768 | 0.672 | 0.0 | |
| 224064104 | 990 | predicted protein [Populus trichocarpa] | 0.983 | 0.768 | 0.679 | 0.0 | |
| 359489827 | 1026 | PREDICTED: uncharacterized protein LOC10 | 0.975 | 0.735 | 0.661 | 0.0 | |
| 297745376 | 1026 | unnamed protein product [Vitis vinifera] | 0.975 | 0.735 | 0.661 | 0.0 | |
| 255541752 | 935 | transferase, transferring glycosyl group | 0.892 | 0.739 | 0.692 | 0.0 | |
| 147777557 | 1040 | hypothetical protein VITISV_003086 [Viti | 0.975 | 0.725 | 0.648 | 0.0 | |
| 356522554 | 1034 | PREDICTED: uncharacterized protein LOC10 | 0.965 | 0.722 | 0.602 | 0.0 | |
| 449495248 | 1037 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.979 | 0.730 | 0.624 | 0.0 | |
| 449441374 | 1037 | PREDICTED: uncharacterized protein LOC10 | 0.979 | 0.730 | 0.624 | 0.0 | |
| 356560308 | 1035 | PREDICTED: uncharacterized protein LOC10 | 0.968 | 0.724 | 0.611 | 0.0 |
| >gi|224127812|ref|XP_002320170.1| predicted protein [Populus trichocarpa] gi|222860943|gb|EEE98485.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/770 (67%), Positives = 617/770 (80%), Gaps = 9/770 (1%)
Query: 1 MGSLESGLVVPLKRD--NLGRSSS--RTERQHSFLQRNRSRFSRFLFFKKLDYLLWICTV 56
MGSLE+G + KRD L RS S RTER H FL R RS FSRFL FKKLDY+ WICTV
Sbjct: 1 MGSLETG-GISFKRDKNTLIRSYSAGRTER-HPFLYRPRSSFSRFLRFKKLDYIQWICTV 58
Query: 57 AVFLFFVVIFQLFLPGSVTVMDESQGS-LRDFDKVPADLMFLKEMGLLDFGEEVTFLPLK 115
AVFLFFVV+FQ+FLPGSV E S R + V DL +LKE+G LDFGE++ F P K
Sbjct: 59 AVFLFFVVLFQMFLPGSVVEKSELGSSPWRGMELVDKDLWYLKEIGGLDFGEDIKFQPSK 118
Query: 116 LMEKFQSEDKDVNLTSVFHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGY 175
+++ F+ E++++N+ S +R L RF YRKPQLALVF DLL+DP QL MVT+A AL+EIGY
Sbjct: 119 ILQHFRKENREMNM-SFSNRTLSRFPYRKPQLALVFADLLVDPHQLLMVTVATALQEIGY 177
Query: 176 AIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQ 235
I VYSL DG A +W+++ PV I+Q + V+WLNYDGILVNSLE K V S MQ
Sbjct: 178 TIHVYSLGDGPAQSIWKSMRSPVNIIQISHKMEIAVDWLNYDGILVNSLETKSVFSCFMQ 237
Query: 236 EPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAF 295
EPFKS+PL+WTI+E TLAT +R Y SS Q+ELL DW+K FNRATVVVFP++VLPMMYSAF
Sbjct: 238 EPFKSVPLIWTINERTLATHSRQYTSSWQIELLYDWRKAFNRATVVVFPNHVLPMMYSAF 297
Query: 296 DAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHAL 355
D GNYYVIPGSPA WE +T M LYND + VKMG++PDD+VIAIVG+QF+YRGLWLEHAL
Sbjct: 298 DTGNYYVIPGSPADIWETETTMALYNDEIHVKMGYEPDDIVIAIVGSQFLYRGLWLEHAL 357
Query: 356 ILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEG 415
+L+ALLPLF+E S++N S S +K++ILSGD T NYSV +EAIA NL YP G VKH A +
Sbjct: 358 VLKALLPLFAEFSLDNNSKSHLKIIILSGDPTGNYSVAVEAIAANLSYPRGTVKHFAVDD 417
Query: 416 DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPK 475
DV S L AD+VIYGSFLEEQ+FPEILVKA+ KPII PDLS IRKYVDDRVNGYLFPK
Sbjct: 418 DVGSPLGAADLVIYGSFLEEQSFPEILVKAMSIGKPIITPDLSMIRKYVDDRVNGYLFPK 477
Query: 476 ENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSEV 535
EN+K LT I+LQ I+ G +SP ARNIAS+G+ + KNLM LET+EGYA LLENV++LPSEV
Sbjct: 478 ENLKVLTQIVLQAISKGTLSPLARNIASMGKNTAKNLMVLETVEGYATLLENVVELPSEV 537
Query: 536 AFPKSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSNHTERDSYLPV 595
PK++ E+ PKLK+EW WHLF+AF+NSTHEDRT +S+R+L +E Q N+ +++S +
Sbjct: 538 TPPKAVSEIPPKLKKEWCWHLFKAFMNSTHEDRTLKSSRYLKTVE-EQWNYMQKESSGSI 596
Query: 596 PETDDSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDL 655
T+DSF YDIW+EE++I MLN RKRREEEELKDR DQ HGTW++VY+SAKRADR++NDL
Sbjct: 597 AATNDSFSYDIWEEERNIMMLNTRKRREEEELKDRTDQPHGTWEDVYKSAKRADRSRNDL 656
Query: 656 HERDEGELERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPSRLP 715
HERDEGEL RTGQPLCIYEPY GEGTW FLH SLYRGIGLS+KGRRPR DD+DAPSRL
Sbjct: 657 HERDEGELLRTGQPLCIYEPYFGEGTWSFLHQSSLYRGIGLSTKGRRPRTDDIDAPSRLS 716
Query: 716 LLNNPYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANKFRIHKI 765
LL+ PYYRD LGEYGAFFAIANRIDR+HKN+WIGFQSWRATA K + +I
Sbjct: 717 LLSKPYYRDALGEYGAFFAIANRIDRIHKNSWIGFQSWRATARKASLSRI 766
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064104|ref|XP_002301386.1| predicted protein [Populus trichocarpa] gi|222843112|gb|EEE80659.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/770 (67%), Positives = 621/770 (80%), Gaps = 9/770 (1%)
Query: 1 MGSLESGLVVPLKRD--NLGRSSS--RTERQHSFLQRNRSRFSRFLFFKKLDYLLWICTV 56
MGSLESG + KRD NL RS S RTER + FL R RSR SRFL FKKLDY+ WICTV
Sbjct: 1 MGSLESG-GISFKRDSNNLIRSHSAGRTER-NPFLYRPRSRLSRFLLFKKLDYIQWICTV 58
Query: 57 AVFLFFVVIFQLFLPGSVTVMDESQGS-LRDFDKVPADLMFLKEMGLLDFGEEVTFLPLK 115
AVFLFFVV+FQ+FLPGSV E S R + V DL++LKE+G LDFGE++ F P K
Sbjct: 59 AVFLFFVVLFQMFLPGSVVEKSELGSSPWRGMELVNKDLLYLKEIGGLDFGEDIKFEPSK 118
Query: 116 LMEKFQSEDKDVNLTSVFHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGY 175
+++KF+ E++++N+ + L RF YRKPQLALVF DLL+DPQQL MVT+A AL+EIGY
Sbjct: 119 ILQKFRKENREMNMPFT-NGTLSRFPYRKPQLALVFADLLVDPQQLLMVTVATALQEIGY 177
Query: 176 AIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQ 235
I VY+L DG +W+++G PV I+Q + V+WLNYDGILVNSLE + VIS MQ
Sbjct: 178 TIHVYTLRDGPVQNIWKSMGYPVTIIQMSHKLEIAVDWLNYDGILVNSLETRSVISCFMQ 237
Query: 236 EPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAF 295
EPFKS+PL+WTIHE LA R+R Y SS Q+ELLNDW+K FNRATVVVFP++VLPMMYSAF
Sbjct: 238 EPFKSVPLIWTIHERALAIRSRQYTSSWQIELLNDWRKAFNRATVVVFPNHVLPMMYSAF 297
Query: 296 DAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHAL 355
DAGNYYVIPGSPA+ WEADT M LYND +RVKMG++P D+VIA+VG+QF+YRGLWLEHAL
Sbjct: 298 DAGNYYVIPGSPAEVWEADTTMALYNDDIRVKMGYEPTDIVIAVVGSQFLYRGLWLEHAL 357
Query: 356 ILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEG 415
+L+ALLPL + +++ S S +K+++LSGDST NYS +EAIA NL YP G VKH A +G
Sbjct: 358 VLKALLPLLQDFPLDSNSISHLKIIVLSGDSTGNYSAAVEAIAVNLSYPRGTVKHFAVDG 417
Query: 416 DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPK 475
DV S L+ D+VIYGSFLEEQ+FPE LV+A+ KPIIAPDLS I KYVDDRVNGYLFPK
Sbjct: 418 DVSSALSAVDLVIYGSFLEEQSFPEFLVRAMSIGKPIIAPDLSMIGKYVDDRVNGYLFPK 477
Query: 476 ENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSEV 535
EN+KALT I+LQ I+ G +SP ARNIASIG+ + KNLM LETIEGYA LLENVLKLPSEV
Sbjct: 478 ENLKALTQIVLQAISKGTLSPLARNIASIGKSTAKNLMVLETIEGYATLLENVLKLPSEV 537
Query: 536 AFPKSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSNHTERDSYLPV 595
A PK++ E+ PKLK+EW W+LF+AFLNSTHED T +S+R+LN++E Q NH + +S +
Sbjct: 538 ALPKAVPEIPPKLKKEWCWNLFKAFLNSTHEDVTLKSSRYLNKVE-EQWNHEQGESTGSI 596
Query: 596 PETDDSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDL 655
TDDSF YDIW+EEK+I MLN RKRREEEELKDR DQ GTW+EVYRSAKRADR++NDL
Sbjct: 597 AATDDSFSYDIWEEEKNILMLNTRKRREEEELKDRTDQPRGTWEEVYRSAKRADRSRNDL 656
Query: 656 HERDEGELERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPSRLP 715
HERDEGEL RTGQPLCIYEPY GEGTW FLH SLYRGIGLS+KGRRPR DD+DAPSRL
Sbjct: 657 HERDEGELLRTGQPLCIYEPYFGEGTWSFLHLSSLYRGIGLSTKGRRPRTDDIDAPSRLS 716
Query: 716 LLNNPYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANKFRIHKI 765
LL+N YYRD LG+YGAFFAIANRIDR+HKN+WIGFQSWRATA K + +I
Sbjct: 717 LLSNSYYRDALGDYGAFFAIANRIDRIHKNSWIGFQSWRATARKASLSRI 766
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359489827|ref|XP_002276292.2| PREDICTED: uncharacterized protein LOC100262009 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/766 (66%), Positives = 613/766 (80%), Gaps = 11/766 (1%)
Query: 1 MGSLESGLVVPLKRDNLGRSSSRTERQHSFLQRNRSRFSRFLFFKKLDYLLWICTVAVFL 60
MGSLE+G VP+KRD L RSSS + S QR RFSRFLFF KLDYL W+CTVAVF
Sbjct: 1 MGSLENG--VPVKRDPLLRSSSN---KGSAFQRPIVRFSRFLFFGKLDYLQWVCTVAVFC 55
Query: 61 FFVVIFQLFLPGSVTVMDESQGSLRDFDKVPADLMFLKEMGLLDFGEEVTFLPLKLMEKF 120
FFVV+FQ+FLPG +M++S SL++ + DL F+K +G LDFGE + F P KL++KF
Sbjct: 56 FFVVLFQMFLPG--LIMEKSGESLKNMENGYGDLSFIKNIGGLDFGEGIRFEPSKLLQKF 113
Query: 121 QSEDKDVNLTSVFHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVY 180
Q E +VNL+S R HRFGYRKPQLALVFPDLL+DPQQL MVT+A AL E+GY IQVY
Sbjct: 114 QKEADEVNLSSA-SRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVASALLEMGYTIQVY 172
Query: 181 SLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKS 240
SLEDG + +WRN+G PV I+++ + A+ V+WLNYDGI+VNSLEA+ V+S +QEPFKS
Sbjct: 173 SLEDGPVNAIWRNVGFPVTIIRSNAKSAAVVDWLNYDGIIVNSLEARGVVSCFVQEPFKS 232
Query: 241 LPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNY 300
LPL+WTI EGTLATR R Y +G++EL+NDWKKVFNRAT VVFP+YVLPM+YS FD+GNY
Sbjct: 233 LPLIWTIPEGTLATRLRQYNLTGKIELVNDWKKVFNRATAVVFPNYVLPMIYSTFDSGNY 292
Query: 301 YVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRAL 360
+VIPGSPA+AWE D M + D+ RVKMG+ PDD VIA+V +QF+Y+GLWLEHALIL+AL
Sbjct: 293 FVIPGSPAQAWEVDNFMASHRDSPRVKMGYGPDDFVIALVRSQFLYKGLWLEHALILQAL 352
Query: 361 LPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE-GDVDS 419
LPL +E V+N SNS +K++I SG+S +NYSV +EAIA L YP GVVKH+A + G+ D+
Sbjct: 353 LPLVAEFPVDNNSNSHLKILITSGNSANNYSVAVEAIALKLRYPKGVVKHIAIDVGEADN 412
Query: 420 VLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIK 479
VL AD+VIYGSFLEEQ+FP+IL+KA+ F K IIAPDLS I+KYVDDRVNGYLFPKE I
Sbjct: 413 VLAAADIVIYGSFLEEQSFPDILIKAMSFGKLIIAPDLSIIKKYVDDRVNGYLFPKEKIS 472
Query: 480 ALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSEVAFPK 539
LT +ILQ+I+ GK+SP NIAS+G+ + KNLM +ET+EGYA LLEN+LK PSEVA PK
Sbjct: 473 VLTQVILQMISEGKLSPLVHNIASLGKSTAKNLMVMETVEGYASLLENLLKFPSEVASPK 532
Query: 540 SIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSNHTERDSYLPVPETD 599
++ E+ PKLKEEWQW+LF A +ST+ +RTSRS+RFL++ E S S TD
Sbjct: 533 AVTEIPPKLKEEWQWNLFAASGHSTYTNRTSRSHRFLDKFEEQWSQSQTGGS--GSVTTD 590
Query: 600 DSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDLHERD 659
+SF Y IW+EEK I + N +KRREE+ELKDR DQ G+W++VYRSAKRADRAKNDLHERD
Sbjct: 591 ESFPYSIWEEEKLIGIANAKKRREEDELKDRTDQPRGSWEDVYRSAKRADRAKNDLHERD 650
Query: 660 EGELERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPSRLPLLNN 719
+GELERTGQPLCIYEPY GEGTWPFLH SLYRGIGLS+KGRR DD+DAPSRLPLLNN
Sbjct: 651 DGELERTGQPLCIYEPYFGEGTWPFLHATSLYRGIGLSTKGRRREADDIDAPSRLPLLNN 710
Query: 720 PYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANKFRIHKI 765
PYYRD LGEYGAFFAIANR+DR+H+NAWIGFQSWRATA + KI
Sbjct: 711 PYYRDALGEYGAFFAIANRVDRIHRNAWIGFQSWRATARNASLSKI 756
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745376|emb|CBI40456.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/766 (66%), Positives = 613/766 (80%), Gaps = 11/766 (1%)
Query: 1 MGSLESGLVVPLKRDNLGRSSSRTERQHSFLQRNRSRFSRFLFFKKLDYLLWICTVAVFL 60
MGSLE+G VP+KRD L RSSS + S QR RFSRFLFF KLDYL W+CTVAVF
Sbjct: 1 MGSLENG--VPVKRDPLLRSSSN---KGSAFQRPIVRFSRFLFFGKLDYLQWVCTVAVFC 55
Query: 61 FFVVIFQLFLPGSVTVMDESQGSLRDFDKVPADLMFLKEMGLLDFGEEVTFLPLKLMEKF 120
FFVV+FQ+FLPG +M++S SL++ + DL F+K +G LDFGE + F P KL++KF
Sbjct: 56 FFVVLFQMFLPG--LIMEKSGESLKNMENGYGDLSFIKNIGGLDFGEGIRFEPSKLLQKF 113
Query: 121 QSEDKDVNLTSVFHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVY 180
Q E +VNL+S R HRFGYRKPQLALVFPDLL+DPQQL MVT+A AL E+GY IQVY
Sbjct: 114 QKEADEVNLSSA-SRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVASALLEMGYTIQVY 172
Query: 181 SLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKS 240
SLEDG + +WRN+G PV I+++ + A+ V+WLNYDGI+VNSLEA+ V+S +QEPFKS
Sbjct: 173 SLEDGPVNAIWRNVGFPVTIIRSNAKSAAVVDWLNYDGIIVNSLEARGVVSCFVQEPFKS 232
Query: 241 LPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNY 300
LPL+WTI EGTLATR R Y +G++EL+NDWKKVFNRAT VVFP+YVLPM+YS FD+GNY
Sbjct: 233 LPLIWTIPEGTLATRLRQYNLTGKIELVNDWKKVFNRATAVVFPNYVLPMIYSTFDSGNY 292
Query: 301 YVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRAL 360
+VIPGSPA+AWE D M + D+ RVKMG+ PDD VIA+V +QF+Y+GLWLEHALIL+AL
Sbjct: 293 FVIPGSPAQAWEVDNFMASHRDSPRVKMGYGPDDFVIALVRSQFLYKGLWLEHALILQAL 352
Query: 361 LPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE-GDVDS 419
LPL +E V+N SNS +K++I SG+S +NYSV +EAIA L YP GVVKH+A + G+ D+
Sbjct: 353 LPLVAEFPVDNNSNSHLKILITSGNSANNYSVAVEAIALKLRYPKGVVKHIAIDVGEADN 412
Query: 420 VLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIK 479
VL AD+VIYGSFLEEQ+FP+IL+KA+ F K IIAPDLS I+KYVDDRVNGYLFPKE I
Sbjct: 413 VLAAADIVIYGSFLEEQSFPDILIKAMSFGKLIIAPDLSIIKKYVDDRVNGYLFPKEKIS 472
Query: 480 ALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSEVAFPK 539
LT +ILQ+I+ GK+SP NIAS+G+ + KNLM +ET+EGYA LLEN+LK PSEVA PK
Sbjct: 473 VLTQVILQMISEGKLSPLVHNIASLGKSTAKNLMVMETVEGYASLLENLLKFPSEVASPK 532
Query: 540 SIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSNHTERDSYLPVPETD 599
++ E+ PKLKEEWQW+LF A +ST+ +RTSRS+RFL++ E S S TD
Sbjct: 533 AVTEIPPKLKEEWQWNLFAASGHSTYTNRTSRSHRFLDKFEEQWSQSQTGGS--GSVTTD 590
Query: 600 DSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDLHERD 659
+SF Y IW+EEK I + N +KRREE+ELKDR DQ G+W++VYRSAKRADRAKNDLHERD
Sbjct: 591 ESFPYSIWEEEKLIGIANAKKRREEDELKDRTDQPRGSWEDVYRSAKRADRAKNDLHERD 650
Query: 660 EGELERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPSRLPLLNN 719
+GELERTGQPLCIYEPY GEGTWPFLH SLYRGIGLS+KGRR DD+DAPSRLPLLNN
Sbjct: 651 DGELERTGQPLCIYEPYFGEGTWPFLHATSLYRGIGLSTKGRRREADDIDAPSRLPLLNN 710
Query: 720 PYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANKFRIHKI 765
PYYRD LGEYGAFFAIANR+DR+H+NAWIGFQSWRATA + KI
Sbjct: 711 PYYRDALGEYGAFFAIANRVDRIHRNAWIGFQSWRATARNASLSKI 756
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541752|ref|XP_002511940.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223549120|gb|EEF50609.1| transferase, transferring glycosyl groups, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/695 (69%), Positives = 583/695 (83%), Gaps = 4/695 (0%)
Query: 66 FQLFLPGSVTVMDESQGSLRDFDKVPADLMFLKEMGLLDFGEEVTFLPLKLMEKFQSEDK 125
F +FLPGS+ +D+S+ SL+ + VP DL++LK MG LDFGE+V F PLKL+EKFQ E++
Sbjct: 14 FHMFLPGSM--IDKSEVSLKKLEIVPGDLLYLKAMGTLDFGEDVQFQPLKLLEKFQKENR 71
Query: 126 DVNLTS-VFHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLED 184
+VNLTS F+R L RFGYRKPQLALVF DLL DPQQL MVT+A AL+EIGYAIQV+S+ D
Sbjct: 72 EVNLTSSAFNRTLLRFGYRKPQLALVFADLLADPQQLLMVTVATALQEIGYAIQVFSVND 131
Query: 185 GRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLV 244
G H++W+ IGVPV I QT + V+WL +D I+VNSLEAKVV MQEPFKS+PL+
Sbjct: 132 GPVHDIWKRIGVPVTIFQTNHKMEIAVDWLIFDSIIVNSLEAKVVFPCFMQEPFKSIPLI 191
Query: 245 WTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIP 304
WTIHE TL R+R Y S+GQ+EL++DWK+VFNRATVVVFP++VLPMMYSAFDA NYYVIP
Sbjct: 192 WTIHEKTLGIRSRQYISNGQIELVSDWKRVFNRATVVVFPNHVLPMMYSAFDAENYYVIP 251
Query: 305 GSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLF 364
GSPA+ WEA+ +Y D++R+KMG++PDD++IAIVG+QF+YRGLWLEHALIL+AL PLF
Sbjct: 252 GSPAEVWEAEAMAAVYKDSIRMKMGYRPDDIIIAIVGSQFLYRGLWLEHALILQALSPLF 311
Query: 365 SEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTA 424
S+ S ++ SN +K+++LSG+STSNYSV IEAIA NLHYP+G VKH+A +GDV S L A
Sbjct: 312 SDFSFDDNSNPHLKIIVLSGNSTSNYSVAIEAIAINLHYPIGAVKHIAIDGDVGSFLTAA 371
Query: 425 DVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHI 484
D+V YGSF + Q+FPE+L+KA+C KPIIAPDLS IRKYVDDRVNGY+FPKENI+ LT I
Sbjct: 372 DIVTYGSFHDGQSFPEMLMKAMCMEKPIIAPDLSVIRKYVDDRVNGYIFPKENIRVLTQI 431
Query: 485 ILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSEVAFPKSIKEL 544
ILQVI+ GK+SP ARNIASIG+ + KNLM E +EGYA LLE+++KLPSEVA PK++ ++
Sbjct: 432 ILQVISKGKLSPLARNIASIGKGTAKNLMVAEAVEGYASLLESIIKLPSEVAPPKAVAQI 491
Query: 545 SPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSNHTERDSYLPVPETDDSFLY 604
PKLKEEW WHLFEAFLNST+EDR S+RFL ++E Q NH++R+ + D+SF Y
Sbjct: 492 PPKLKEEWSWHLFEAFLNSTYEDRVLTSSRFLIKVE-EQWNHSQREISSSIASNDESFSY 550
Query: 605 DIWKEEKDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDLHERDEGELE 664
DIW+EEK+I++LN +KRREE+ELKDR DQ HGTW+EVYRS KRADR +NDLHERDEGELE
Sbjct: 551 DIWEEEKNIQILNAKKRREEQELKDRTDQPHGTWEEVYRSTKRADRTRNDLHERDEGELE 610
Query: 665 RTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPSRLPLLNNPYYRD 724
RTGQPLCIYEPYLGE TW FLH SLYRG+GLS+KGRRPR DDVDAPSRLPLL++PYYRD
Sbjct: 611 RTGQPLCIYEPYLGEATWSFLHSSSLYRGVGLSTKGRRPRTDDVDAPSRLPLLSSPYYRD 670
Query: 725 ILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANK 759
LGEYGAFFAIANRIDR+HKNAWIGFQSWRATA K
Sbjct: 671 ALGEYGAFFAIANRIDRIHKNAWIGFQSWRATARK 705
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147777557|emb|CAN69310.1| hypothetical protein VITISV_003086 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/780 (64%), Positives = 613/780 (78%), Gaps = 25/780 (3%)
Query: 1 MGSLESGLVVPLKRDNLGRSSSRTERQHSFLQRNRSRFSRFLFFKKLDYLLWICTVAVFL 60
MGSLE+G VP+KRD L RSSS + S QR RFSRFLFF KLDYL W+CTVAVF
Sbjct: 1 MGSLENG--VPVKRDPLLRSSSN---KGSAFQRPIVRFSRFLFFGKLDYLQWVCTVAVFC 55
Query: 61 FFVVIFQLFLPGSVTVMDESQGSLRDFDKVPADLMFLKEMGLLDFGEEVTFLPLKLMEKF 120
FFVV+FQ+FLPG +M++S SL++ + DL F+K++G LDFGE + F P KL++KF
Sbjct: 56 FFVVLFQMFLPG--LIMEKSGESLKNMENGYGDLSFIKKIGGLDFGEGIRFEPSKLLQKF 113
Query: 121 QSEDKDVNLTSVFHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQ-- 178
Q E +VNL+S R HRFGYRKPQLALVFPDLL+DPQQL MVT+A AL E+GY IQ
Sbjct: 114 QKEADEVNLSSA-SRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVASALLEMGYTIQAL 172
Query: 179 ------------VYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEA 226
VYSLEDG + +WRN+G PV I+++ + A+ V+WLNYDGI+VNSLEA
Sbjct: 173 PYLVSIYVAWIQVYSLEDGPVNAIWRNVGFPVTIIRSNAKSAAVVDWLNYDGIIVNSLEA 232
Query: 227 KVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDY 286
+ V+S +QEPFKSLPL+WTI EGTLATR R Y +G++EL+NDWKKVFNRAT VVFP+Y
Sbjct: 233 RGVVSCFVQEPFKSLPLIWTIPEGTLATRLRQYNLTGKIELVNDWKKVFNRATAVVFPNY 292
Query: 287 VLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMY 346
VLPM+YS FD+GNY+VIPGSPA+AWE D M + D+ RVKMG+ PDD VIA+V +QF+Y
Sbjct: 293 VLPMIYSTFDSGNYFVIPGSPAQAWEVDNFMASHRDSPRVKMGYGPDDFVIALVRSQFLY 352
Query: 347 RGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLG 406
+GLWLEHALIL+ALLPL +E V+N SNS +K++I SG+S +NYSV +EAIA L YP G
Sbjct: 353 KGLWLEHALILQALLPLVAEFPVDNNSNSHLKILITSGNSANNYSVAVEAIALKLRYPKG 412
Query: 407 VVKHMAAE-GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVD 465
VVKH+A + G+ D+VL AD+VIYGSFLEEQ+FP+IL+KA+ F K IIAPDLS I+KYVD
Sbjct: 413 VVKHIAIDVGEADNVLAAADIVIYGSFLEEQSFPDILIKAMSFGKXIIAPDLSIIKKYVD 472
Query: 466 DRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLL 525
DRV GYLFPKE I LT +ILQ+I+ GK+SP NIAS+G+ + KNLM +ET+EGYA LL
Sbjct: 473 DRVXGYLFPKEKISVLTQVILQMISEGKLSPLVHNIASLGKSTAKNLMVMETVEGYASLL 532
Query: 526 ENVLKLPSEVAFPKSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSN 585
EN+LK PSEVA PK++ E+ PKLKEEWQW+LF A +ST+ +RTSRS+RFL++ E S
Sbjct: 533 ENLLKFPSEVASPKAVTEIPPKLKEEWQWNLFAASGHSTYTNRTSRSHRFLDKFEEQWSQ 592
Query: 586 HTERDSYLPVPETDDSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSA 645
S TD+SF Y IW+EEK I + N +KRREE+ELKDR DQ G+W++VYRSA
Sbjct: 593 SQTGGS--GSVTTDESFPYSIWEEEKLIGIANAKKRREEDELKDRTDQPRGSWEDVYRSA 650
Query: 646 KRADRAKNDLHERDEGELERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRR 705
KRADRAKNDLHERD+GELERTGQPLCIYEPY GEGTWPFLH SLYRGIGLS+KGRR
Sbjct: 651 KRADRAKNDLHERDDGELERTGQPLCIYEPYFGEGTWPFLHATSLYRGIGLSTKGRRREA 710
Query: 706 DDVDAPSRLPLLNNPYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANKFRIHKI 765
DD+DAPSRLPLLNNPYYRD LGEYGAFFAIANR+DR+H+NAWIGFQSWRATA + KI
Sbjct: 711 DDIDAPSRLPLLNNPYYRDALGEYGAFFAIANRVDRIHRNAWIGFQSWRATARNASLSKI 770
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522554|ref|XP_003529911.1| PREDICTED: uncharacterized protein LOC100806723 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/767 (60%), Positives = 600/767 (78%), Gaps = 20/767 (2%)
Query: 1 MGSLESGLVVPLKRDNLGRSSSRTERQHSFLQRNRSRFSRFLFFKKLDYLLWICTVAVFL 60
MGSLESG + LK+ +L S + ++ F R RS FSR LF KKLDY+ WICTV VFL
Sbjct: 1 MGSLESG--ISLKKGSLFGSQFSRKEKNPFSHRFRSSFSRLLF-KKLDYVQWICTVVVFL 57
Query: 61 FFVVIFQLFLPGSVTVMDESQGSLRDFDKVPADLMFLKEMG-----LLDFGEEVTFLPLK 115
V++FQ+FLPGSV + + +GSL ++ +D +F + G +LD GE+ FLP K
Sbjct: 58 CLVIVFQMFLPGSV-LENSEEGSLEAV-RMRSDNLF--QYGDIHDVVLDIGEDAVFLP-K 112
Query: 116 LMEKFQ--SEDKDVNLTSVFHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREI 173
+ EKF E +DV+L F+ K+ FGYRKPQLALVF +LL+D QQL MVT+ AL+EI
Sbjct: 113 ISEKFSRAGEGRDVDL---FNHKVPHFGYRKPQLALVFGELLVDSQQLLMVTVGSALQEI 169
Query: 174 GYAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNI 233
GY IQV+SLEDG H VWRN+ VP+ I++T ++ + V+WLNYDGI+V+SLEAK S
Sbjct: 170 GYEIQVFSLEDGPGHNVWRNLRVPITIIRTCDKRNNTVDWLNYDGIIVSSLEAKSAFSCF 229
Query: 234 MQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYS 293
+QEPFKS+PL+W +HE LA R+R Y ++GQ+ELLNDW +VFNR+TVVVFP+Y LPM+YS
Sbjct: 230 LQEPFKSIPLIWIVHENALAYRSRQYTTNGQIELLNDWGRVFNRSTVVVFPNYALPMIYS 289
Query: 294 AFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEH 353
FDAGN+YVIPGSPA+ EA+ M L D +R MG+ P+D++IAIVG++F+Y+G+WL H
Sbjct: 290 TFDAGNFYVIPGSPAETLEAEAFMALQKDNLRANMGYGPEDVIIAIVGSRFLYKGMWLGH 349
Query: 354 ALILRALLPLFSEVSV-ENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMA 412
A++LRAL PL + + ++ S++ ++++ S + T+NY+V +E +AH+L YP G+++H+A
Sbjct: 350 AIVLRALKPLLEDFLLNKDNSSAQFRIIVHSEELTNNYTVALETMAHSLKYPGGIIEHIA 409
Query: 413 AEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYL 472
+ + DSVL TADVVIYGSFLEEQ+FPEIL+KA+ F KPIIAPD+ IRKYVDDRVNGYL
Sbjct: 410 GDLNADSVLGTADVVIYGSFLEEQSFPEILIKAMSFEKPIIAPDVPMIRKYVDDRVNGYL 469
Query: 473 FPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLP 532
FPK+NI+ L I+L+VI+ GKISP A NIASIGR + KNLMA E I+GYA LL+N+L+LP
Sbjct: 470 FPKDNIRVLRQILLEVISKGKISPLACNIASIGRSTAKNLMASEAIDGYASLLQNILRLP 529
Query: 533 SEVAFPKSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSNHTERDSY 592
SEV+ PK++ E++P KE+WQWHLFEAF N T+++R RSN FL++ E Q NH++++
Sbjct: 530 SEVSPPKAVSEIAPNFKEQWQWHLFEAFPNMTYQNRALRSNTFLDKYE-HQLNHSQKNRS 588
Query: 593 LPVPETDDSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAK 652
+D F+Y +W+EEK ++ +KRRE+EELKDR++QSHGTW++VY+SAKRADR+K
Sbjct: 589 TTAVSANDVFVYSLWEEEKYTQLAITKKRREDEELKDRMEQSHGTWEDVYKSAKRADRSK 648
Query: 653 NDLHERDEGELERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPS 712
NDLHERDEGELERTGQPLCIYEPY GEG+WPFLH +SLYRGIGLS KGRRP RDDVDAPS
Sbjct: 649 NDLHERDEGELERTGQPLCIYEPYFGEGSWPFLHKKSLYRGIGLSGKGRRPGRDDVDAPS 708
Query: 713 RLPLLNNPYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANK 759
RLPLLNN YYRD+L +YGAFFAIAN+IDRLH+NAWIGFQSWRATA K
Sbjct: 709 RLPLLNNGYYRDLLSDYGAFFAIANKIDRLHRNAWIGFQSWRATARK 755
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449495248|ref|XP_004159777.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212216 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/767 (62%), Positives = 594/767 (77%), Gaps = 9/767 (1%)
Query: 1 MGSLESGLVVPLKRDNLGRSSS--RTERQHSFLQRNRSRFSRFLFFKKLDYLLWICTVAV 58
MGSLE+G PLKRD L RSSS R ER + FLQR RSRFSRFLFF+K+DYL WICTVAV
Sbjct: 1 MGSLENGF--PLKRDPLLRSSSSVRGER-YPFLQRPRSRFSRFLFFRKIDYLQWICTVAV 57
Query: 59 FLFFVVIFQLFLPGSVTVMDESQGSLRDFDKVPADLMFLKEMGLLDFGEEVTFLPLKLME 118
F FFVV+FQ+FLPGSV +++S+ +L+D +K DL FLKE+G+LDFGE++ F P KL+
Sbjct: 58 FFFFVVLFQMFLPGSV--VEKSEVALKDVEKSLGDLKFLKELGMLDFGEDIRFEPSKLLG 115
Query: 119 KFQSEDKDVNLTSVFHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQ 178
KF+ E ++ + +S F+R RFGYRKPQLALVF DLL+D Q+ MVTIA AL+EIGY Q
Sbjct: 116 KFKKEAREADFSS-FNRTRSRFGYRKPQLALVFSDLLVDSYQVLMVTIASALQEIGYVFQ 174
Query: 179 VYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPF 238
VYSL+ G A++VWR +GVPV ++Q+ E V+WLNYDGILV+SL K V S +QEPF
Sbjct: 175 VYSLQGGPANDVWRQMGVPVTLIQSCDETEVMVDWLNYDGILVHSLGVKDVFSCYLQEPF 234
Query: 239 KSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAG 298
KSLPL+WTIHE LA R++NYAS G L++LNDWK+VFN +TVVVFP+YV+PM+YSA+D+G
Sbjct: 235 KSLPLIWTIHEEALAIRSQNYASDGLLDILNDWKRVFNHSTVVVFPNYVMPMIYSAYDSG 294
Query: 299 NYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILR 358
N++VIP PA+A EA+ ++ D +R KMG+ DDLVIAIVG+QF+YRG+WLEHA++L+
Sbjct: 295 NFFVIPSFPAEALEAEIDVTSDADNLRAKMGYANDDLVIAIVGSQFLYRGMWLEHAMVLQ 354
Query: 359 ALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVD 418
A+LPL E S SNS +K+ +LSGDS SNY++ +EAIA L YP VVKH D D
Sbjct: 355 AMLPLLHEFSFYEHSNSRLKIFVLSGDSNSNYTMAVEAIAQRLEYPRSVVKHFPVAADSD 414
Query: 419 SVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENI 478
L+ AD+VIYGS LEEQ+FP++LVKA+ KPIIAPDL+ IRK+VDDRVNGYLFPK N
Sbjct: 415 KALSMADLVIYGSCLEEQSFPKVLVKAMGMGKPIIAPDLAIIRKHVDDRVNGYLFPKGNF 474
Query: 479 KALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSEVAFP 538
L+ IILQVI+ G++SP A++IASIGR +V NLM ET+EGYA LL+ VLKLPSE A
Sbjct: 475 NVLSQIILQVISEGRLSPLAQSIASIGRDTVINLMVSETVEGYASLLDAVLKLPSEAAPA 534
Query: 539 KSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSNHTERDSYLPVPET 598
K + E+ KLKE+WQW LF+ N T R +S L++ E NHT +
Sbjct: 535 KEVAEIPSKLKEKWQWQLFKGVSNLTVLQRNEKSFTVLDEFE-KNWNHTPKRKPGSSFAL 593
Query: 599 DDSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDLHER 658
++SF+Y IW+EE+ M N+++RREE+E+KDR +Q H TW++VYRSAK+ADR+KNDLHER
Sbjct: 594 NESFIYGIWEEERYTVMSNIKRRREEDEIKDRTEQPHNTWEDVYRSAKKADRSKNDLHER 653
Query: 659 DEGELERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPSRLPLLN 718
DEGELERTGQPLCIYEPY GEG WPFLH SLYRGIGLSSKGRR DDVDAPSRLPLLN
Sbjct: 654 DEGELERTGQPLCIYEPYFGEGVWPFLHRYSLYRGIGLSSKGRRSGIDDVDAPSRLPLLN 713
Query: 719 NPYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANKFRIHKI 765
NPYYR++LGEYGAFFAIANR+DR+HKNAWIGF SWRATA + KI
Sbjct: 714 NPYYRNVLGEYGAFFAIANRVDRIHKNAWIGFHSWRATARNVSLSKI 760
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441374|ref|XP_004138457.1| PREDICTED: uncharacterized protein LOC101212216 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/767 (62%), Positives = 594/767 (77%), Gaps = 9/767 (1%)
Query: 1 MGSLESGLVVPLKRDNLGRSSS--RTERQHSFLQRNRSRFSRFLFFKKLDYLLWICTVAV 58
MGSLE+G PLKRD L RSSS R ER + FLQR RSRFSRFLFF+K+DYL WICTVAV
Sbjct: 1 MGSLENGF--PLKRDPLLRSSSSVRGER-YPFLQRPRSRFSRFLFFRKIDYLQWICTVAV 57
Query: 59 FLFFVVIFQLFLPGSVTVMDESQGSLRDFDKVPADLMFLKEMGLLDFGEEVTFLPLKLME 118
F FFVV+FQ+FLPGSV +++S+ +L+D +K DL FLKE+G+LDFGE++ F P KL+
Sbjct: 58 FFFFVVLFQMFLPGSV--VEKSEVALKDVEKSLGDLKFLKELGMLDFGEDIRFEPSKLLG 115
Query: 119 KFQSEDKDVNLTSVFHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQ 178
KF+ E ++ + +S F+R RFGYRKPQLALVF DLL+D Q+ MVTIA AL+EIGY Q
Sbjct: 116 KFKKEAREADFSS-FNRTRSRFGYRKPQLALVFSDLLVDSYQVLMVTIASALQEIGYVFQ 174
Query: 179 VYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPF 238
VYSL+ G A++VWR +GVPV ++Q+ E V+WLNYDGILV+SL K V S +QEPF
Sbjct: 175 VYSLQGGPANDVWRQMGVPVTLIQSCDETEVMVDWLNYDGILVHSLGVKDVFSCYLQEPF 234
Query: 239 KSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAG 298
KSLPL+WTIHE LA R++NYAS G L++LNDWK+VFN +TVVVFP+YV+PM+YSA+D+G
Sbjct: 235 KSLPLIWTIHEEALAIRSQNYASDGLLDILNDWKRVFNHSTVVVFPNYVMPMIYSAYDSG 294
Query: 299 NYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILR 358
N++VIP PA+A EA+ ++ D +R KMG+ DDLVIAIVG+QF+YRG+WLEHA++L+
Sbjct: 295 NFFVIPSFPAEALEAEIDVTSDADNLRAKMGYANDDLVIAIVGSQFLYRGMWLEHAMVLQ 354
Query: 359 ALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVD 418
A+LPL E S SNS +K+ +LSGDS SNY++ +EAIA L YP VVKH D D
Sbjct: 355 AMLPLLHEFSFYEHSNSRLKIFVLSGDSNSNYTMAVEAIAQRLEYPRSVVKHFPVAADSD 414
Query: 419 SVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENI 478
L+ AD+VIYGS LEEQ+FP++LVKA+ KPIIAPDL+ IRK+VDDRVNGYLFPK N
Sbjct: 415 KALSMADLVIYGSCLEEQSFPKVLVKAMGMGKPIIAPDLAIIRKHVDDRVNGYLFPKGNF 474
Query: 479 KALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSEVAFP 538
L+ IILQVI+ G++SP A++IASIGR +V NLM ET+EGYA LL+ VLKLPSE A
Sbjct: 475 NVLSQIILQVISEGRLSPLAQSIASIGRDTVINLMVSETVEGYASLLDAVLKLPSEAAPA 534
Query: 539 KSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSNHTERDSYLPVPET 598
K + E+ KLKE+WQW LF+ N T R +S L++ E NHT +
Sbjct: 535 KEVAEIPSKLKEKWQWQLFKGVSNLTVLQRNEKSFTVLDEFE-KNWNHTPKRKPGSSFAL 593
Query: 599 DDSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDLHER 658
++SF+Y IW+EE+ M N+++RREE+E+KDR +Q H TW++VYRSAK+ADR+KNDLHER
Sbjct: 594 NESFIYGIWEEERYTVMSNIKRRREEDEIKDRTEQPHNTWEDVYRSAKKADRSKNDLHER 653
Query: 659 DEGELERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPSRLPLLN 718
DEGELERTGQPLCIYEPY GEG WPFLH SLYRGIGLSSKGRR DDVDAPSRLPLLN
Sbjct: 654 DEGELERTGQPLCIYEPYFGEGVWPFLHRYSLYRGIGLSSKGRRSGIDDVDAPSRLPLLN 713
Query: 719 NPYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANKFRIHKI 765
NPYYR++LGEYGAFFAIANR+DR+HKNAWIGF SWRATA + KI
Sbjct: 714 NPYYRNVLGEYGAFFAIANRVDRIHKNAWIGFHSWRATARNVSLSKI 760
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356560308|ref|XP_003548435.1| PREDICTED: uncharacterized protein LOC100807455 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/764 (61%), Positives = 594/764 (77%), Gaps = 14/764 (1%)
Query: 1 MGSLESGLVVPLKRDNLGRSSSRTERQHSFLQRNRSRFSRFLFFKKLDYLLWICTVAVFL 60
MGSLESG +PLK+ +L S + ++ F R RS FSR LF KKLDY+ WICTV VFL
Sbjct: 1 MGSLESG--IPLKKGSLFGSQFSRKEKNPFSHRFRSSFSRLLF-KKLDYVQWICTVVVFL 57
Query: 61 FFVVIFQLFLPGSVTVMDESQGSLRDFDKVPADLMFLKEMG--LLDFGEEVTFLPLKLME 118
VV+FQ+FLPGSV V + + L+D + + ++ LLD GE+ FLP K+ E
Sbjct: 58 CLVVVFQMFLPGSV-VQNSGEEFLKDVRMRSDNFLQYGDIHKVLLDIGEDAVFLP-KISE 115
Query: 119 KFQ--SEDKDVNLTSVFHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYA 176
KF S +DV+ F+ + +GYRKPQLALVF +LL+D QQL MVT+A AL+EI Y
Sbjct: 116 KFSRGSGGRDVDF---FNHTVQHYGYRKPQLALVFGELLVDSQQLLMVTVASALQEIDYE 172
Query: 177 IQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQE 236
IQV+SL DG H VWRN+ VPV +L+ ++ + V+WLNYDGI+V+SLEAK S +QE
Sbjct: 173 IQVFSLADGPGHNVWRNLRVPVIVLRACDKRNNIVDWLNYDGIIVSSLEAKGAFSCFLQE 232
Query: 237 PFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFD 296
PFKS+PL+W +HE LA R+R Y ++GQ+E+LNDW +VFNR+TVVVFP+Y LPM+YSAFD
Sbjct: 233 PFKSIPLIWAVHENALAYRSRQYTTNGQIEVLNDWGRVFNRSTVVVFPNYALPMIYSAFD 292
Query: 297 AGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALI 356
AGN+YVIPGSPA+ EA+ M L D +RV MG+ P+D++IAIVG+QF+Y+GLWL HA++
Sbjct: 293 AGNFYVIPGSPAETLEAEAFMALQKDNLRVNMGYGPEDVIIAIVGSQFLYKGLWLGHAIV 352
Query: 357 LRALLPLFSEVSV-ENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEG 415
LRAL PL ++ + ++ S++ +++++ SG+ T+NY+V ++ +AH+L YP G+++H+A +
Sbjct: 353 LRALEPLLADFPLNKDNSSAQLRIIVHSGELTNNYTVALKTMAHSLKYPRGIIEHIAGDL 412
Query: 416 DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPK 475
+VDSVL T+DVVIYGSFLEEQ+FPEIL+KA+ F KPIIAPD+ IRKYVDDRVNGYLFPK
Sbjct: 413 NVDSVLGTSDVVIYGSFLEEQSFPEILIKAMSFEKPIIAPDVPMIRKYVDDRVNGYLFPK 472
Query: 476 ENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSEV 535
+NI+ L I+L+VI+ GKISP ARNIASIGR + KNLM E I+GYA LLENVL+LPSEV
Sbjct: 473 DNIRVLRQILLEVISKGKISPLARNIASIGRSTAKNLMVSEAIDGYASLLENVLRLPSEV 532
Query: 536 AFPKSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSNHTERDSYLPV 595
A PK++ E+ P KE+WQWHLFEA N T ++R RSN FL++ E Q NH+++ P
Sbjct: 533 APPKAVSEIPPSAKEQWQWHLFEAVPNMTFQNRVLRSNTFLDKYE-GQWNHSQKTRSTPS 591
Query: 596 PETDDSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDL 655
+D F+Y IW+EEK ++ +KRRE+EELKDR +QSHGTW++VY+SAK+ADR KNDL
Sbjct: 592 VAANDIFVYSIWEEEKYTQLAITKKRREDEELKDRTEQSHGTWEDVYKSAKKADRLKNDL 651
Query: 656 HERDEGELERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPSRLP 715
HERDEGELERTGQPLCIYEPY GEG+W FLH +SLYRGIGLS KGRRP RDDVDAPSRLP
Sbjct: 652 HERDEGELERTGQPLCIYEPYFGEGSWSFLHQKSLYRGIGLSGKGRRPGRDDVDAPSRLP 711
Query: 716 LLNNPYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANK 759
LLNN YYRD+LGEYGAFFAIANRIDRLHKNAWIGFQSWRATA K
Sbjct: 712 LLNNGYYRDLLGEYGAFFAIANRIDRLHKNAWIGFQSWRATARK 755
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 774 | ||||||
| TAIR|locus:2124953 | 1031 | AT4G01210 [Arabidopsis thalian | 0.965 | 0.724 | 0.534 | 5e-218 | |
| TAIR|locus:2184437 | 1050 | AT5G04480 [Arabidopsis thalian | 0.798 | 0.588 | 0.392 | 8.3e-122 | |
| UNIPROTKB|Q0C680 | 349 | HNE_0029 "Glycosyl transferase | 0.136 | 0.303 | 0.339 | 0.00026 |
| TAIR|locus:2124953 AT4G01210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2106 (746.4 bits), Expect = 5.0e-218, P = 5.0e-218
Identities = 413/773 (53%), Positives = 544/773 (70%)
Query: 1 MGSLESGLVVPLKRDNLG-----RSSSRTERQHXXXXXXXXXXXXXXXXXXXDYLLWICT 55
MGSLESG +P KRDN G + + ++Q +YLLWI
Sbjct: 1 MGSLESG--IPTKRDNGGVRGGRQQQQQQQQQQFFLQRNRSRLSRFFLLKSFNYLLWISI 58
Query: 56 VAXXXXXXXXXXXXXPGSVTVMDESQGSLRDFDKVPADLMFLKEMGLLDFGEEVTFLPLK 115
+ PG V+D+S + +P DL+ +E G LDFG++V P K
Sbjct: 59 ICVFFFFAVLFQMFLPG--LVIDKSDKPWISKEILPPDLVGFREKGFLDFGDDVRIEPTK 116
Query: 116 LMEKFQSEDKDVNLTSV-FHRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIG 174
L+ KFQ + N TS + L RFG+RKP+LALVF DLL DP+Q+ MV+++ AL+E+G
Sbjct: 117 LLMKFQRDAHGFNFTSSSLNTTLQRFGFRKPKLALVFGDLLADPEQVLMVSLSKALQEVG 176
Query: 175 YAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIM 234
YAI+VYSLEDG + +W+ +GVPV IL+ +E + ++WL+YDGI+VNSL A+ + + M
Sbjct: 177 YAIEVYSLEDGPVNSIWQKMGVPVTILKPNQESSCVIDWLSYDGIIVNSLRARSMFTCFM 236
Query: 235 QEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSA 294
QEPFKSLPL+W I+E TLA R+R Y S+GQ ELL DWKK+F+RA+VVVF +Y+LP++Y+
Sbjct: 237 QEPFKSLPLIWVINEETLAVRSRQYNSTGQTELLTDWKKIFSRASVVVFHNYLLPILYTE 296
Query: 295 FDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKP--DDLVIAIVGTQFMYRGLWLE 352
FDAGN+YVIPGSP + +A N++ F P DD+VI+IVG+QF+Y+G WLE
Sbjct: 297 FDAGNFYVIPGSPEEVCKAK-NLE-----------FPPQKDDVVISIVGSQFLYKGQWLE 344
Query: 353 HALILRALLPLFXXXXXXXXXXXPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMA 412
HAL+L+AL PLF +K+++L G++ SNYSV IE I+ NL YP VKH+
Sbjct: 345 HALLLQALRPLFSGNYLESDNSH-LKIIVLGGETASNYSVAIETISQNLTYPKEAVKHVR 403
Query: 413 AEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYL 472
G+VD +L ++D+VIYGSFLEEQ+FPEIL+KA+ KPI+APDL NIRKYVDDRV GYL
Sbjct: 404 VAGNVDKILESSDLVIYGSFLEEQSFPEILMKAMSLGKPIVAPDLFNIRKYVDDRVTGYL 463
Query: 473 FPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLP 532
FPK+N+K L+ ++L+VIT GKISP A+ IA +G+ +VKN+MA ETIEGYA LLEN+LK
Sbjct: 464 FPKQNLKVLSQVVLEVITEGKISPLAQKIAMMGKTTVKNMMARETIEGYAALLENMLKFS 523
Query: 533 SEVAFPKSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSNHTERDSY 592
SEVA PK ++++ P+L+EEW WH FEAF++++ +R +RS FL ++E N+T ++
Sbjct: 524 SEVASPKDVQKVPPELREEWSWHPFEAFMDTSPNNRIARSYEFLAKVEG-HWNYTPGEAM 582
Query: 593 LPVPETDDSFLYDIWKEEKDIEMLNVXXXXXXXXXXXXIDQSHGTWDEVYRSAKRADRAK 652
DDSF+Y+IW+EE+ ++M+N + Q GTW++VY+SAKRADR+K
Sbjct: 583 KFGAVNDDSFVYEIWEEERYLQMMNSKKRREDEELKSRVLQYRGTWEDVYKSAKRADRSK 642
Query: 653 NDLHERDEGELERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPS 712
NDLHERDEGEL RTGQPLCIYEPY GEGTW FLH LYRG+GLS KGRRPR DDVDA S
Sbjct: 643 NDLHERDEGELLRTGQPLCIYEPYFGEGTWSFLHQDPLYRGVGLSVKGRRPRMDDVDASS 702
Query: 713 RLPLLNNPYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANKFRIHKI 765
RLPL NNPYYRD LG++GAFFAI+N+IDRLHKN+WIGFQSWRATA K + KI
Sbjct: 703 RLPLFNNPYYRDALGDFGAFFAISNKIDRLHKNSWIGFQSWRATARKESLSKI 755
|
|
| TAIR|locus:2184437 AT5G04480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
Identities = 250/637 (39%), Positives = 368/637 (57%)
Query: 135 RKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNI 194
R R G R P+LALV ++ DP+ L +VT+ L+++GY +V+++E+G A +W +
Sbjct: 156 RSAVRIGVRPPRLALVLGNMKKDPRTLMLVTVMKNLQKLGYVFKVFAVENGEARSLWEQL 215
Query: 195 GVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLAT 254
V +L + E+ +W ++G++ +SLEAK IS++MQEPF+S+PL+W +HE LA
Sbjct: 216 AGHVKVLVS--EQLGHADWTIFEGVIADSLEAKEAISSLMQEPFRSVPLIWIVHEDILAN 273
Query: 255 RARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEAD 314
R Y GQ L++ W+ F RA VVVFP + LPM++S D GN+ VIP S W A+
Sbjct: 274 RLPVYQRMGQNSLISHWRSAFARADVVVFPQFTLPMLHSVLDDGNFVVIPESVVDVWAAE 333
Query: 315 TNMDLYN-DTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFXXXXXXXXX 373
+ + + +R F DD++I ++G+ F Y ++A+ + L PL
Sbjct: 334 SYSETHTKQNLREINEFGEDDVIILVLGSSFFYDEFSWDNAVAMHMLGPLLTRYGRRKDT 393
Query: 374 XXPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFL 433
K + L G+ST S ++ +A L G V+H DV+ VL AD+++Y S
Sbjct: 394 SGSFKFVFLYGNSTKGQSDAVQEVASRLGLTEGTVRHFGLNEDVNRVLRMADILVYASSQ 453
Query: 434 EEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGK 493
EEQ FP ++V+A+ F PII PD ++KY+ D V+G F + + AL +I++G+
Sbjct: 454 EEQNFPPLIVRAMSFGIPIITPDFPIMKKYMADEVHGIFFRRNDPDALLKAFSPLISDGR 513
Query: 494 ISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSEVAFPKSIKELSPKLKEEWQ 553
+S FA+ IAS GR KNLMA E I GYA LLEN+L PS+ P SI +L W+
Sbjct: 514 LSKFAQTIASSGRLLTKNLMATECITGYARLLENMLHFPSDTFLPGSISQLQVAA---WE 570
Query: 554 WHLFEAFLNSTHEDRTSRSNRFLN------QIE-----LLQSNHTERDSYLPVPETDDSF 602
W+ F + L + F+ Q+E +++S + ++ L V + S
Sbjct: 571 WNFFRSELEQPKSFILDSAYAFIGKSGIVFQVEEKFMGVIESTNPVDNNTLFVSDELPSK 630
Query: 603 LYDIWKEEKDIEMLNVXXXXXXXXXXXXIDQSHGTWDEVYRSAKRADRAKNDLHERDEGE 662
L D W ++IE +++ W+E+YR+A+++++ K +++ERDEGE
Sbjct: 631 L-D-WDVLEEIEGAEEYEKVESEELEDRMERDVEDWEEIYRNARKSEKLKFEVNERDEGE 688
Query: 663 LERTGQPLCIYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRPRRDDVDAPSRLPLLNNPYY 722
LERTG+PLCIYE Y G G WPFLHH SLYRG+ LSSK RR DDVDA RLPLLN+ YY
Sbjct: 689 LERTGEPLCIYEIYNGAGAWPFLHHGSLYRGLSLSSKDRRLSSDDVDAADRLPLLNDTYY 748
Query: 723 RDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANK 759
RDIL E G F++AN++D +H WIGFQSWRA K
Sbjct: 749 RDILCEIGGMFSVANKVDSIHMRPWIGFQSWRAAGRK 785
|
|
| UNIPROTKB|Q0C680 HNE_0029 "Glycosyl transferase, group 1 family protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 398 AHNLHYPLGV-VKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456
AH LG V+ + D ++L DVV + S E F + V A +P++A D
Sbjct: 213 AHCARLGLGDRVRFLGWRNDRGALLEACDVVAFPSRYEP--FGTVTVDAWAASRPLVAAD 270
Query: 457 LSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRS 508
+ YV D VNG L PK ++ AL + + +VIT+ ++ AR I GR S
Sbjct: 271 AAGPAAYVKDGVNGLLIPKNDVDALANALTRVITDKALA--AR-IVEGGRAS 319
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 774 719 0.00085 121 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 628 (67 KB)
Total size of DFA: 389 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 56.21u 0.10s 56.31t Elapsed: 00:00:03
Total cpu time: 56.21u 0.10s 56.31t Elapsed: 00:00:03
Start: Sat May 11 00:44:34 2013 End: Sat May 11 00:44:37 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 774 | |||
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 2e-09 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-09 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 6e-06 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 2e-05 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 2e-04 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 2e-04 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 0.002 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 0.003 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 2e-09
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 415 GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFP 474
D+ + AD+ + S E F +L++A+ P+IA D+ + V D G L
Sbjct: 70 EDLIELYRIADLFVLPSRYE--GFGLVLLEAMAAGVPVIATDVGGPAEIVKDGETGLLVD 127
Query: 475 KENIKALTHIILQVITNGKISPFARNIASIGRR 507
+ +AL I +++ + + + R+
Sbjct: 128 PGDAEALAEAIEKLLKDEE---LRERLGENARK 157
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 3e-09
Identities = 74/387 (19%), Positives = 135/387 (34%), Gaps = 53/387 (13%)
Query: 159 QQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDG 218
+ ++ +A AL G+ + V + DG + G+ V + L
Sbjct: 16 AERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLAL 75
Query: 219 ILVNSLEAK---VVISNIMQEPF--------KSLPLVWTIHEGTLATRARNYASSGQLEL 267
L L + VV ++ +PLV T+H G R N
Sbjct: 76 RLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVH-GLEFGRPGNELGLLLKLA 134
Query: 268 LNDWKKVFNRATVVVFP-DYVLPMMYSAF--DAGNYYVIP-GSPAKAWEADTNMDLYNDT 323
++ RA ++ + + VIP G + +
Sbjct: 135 RALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPA------PRA 188
Query: 324 VRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALI--LRALLPLFSEVSVENESNSPIKVMI 381
R ++G D+ VI VG +G+ L+ L L + +V + V++
Sbjct: 189 ARRRLGIPEDEPVILFVGRLVPRKGV---DLLLEALAKLRKEYPDVRL---------VIV 236
Query: 382 LSGDSTSNYSVVIEA--IAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFP 439
G + + + + LG V D+ ++ ADV + S E F
Sbjct: 237 GDGPLREELEALAAELGLGDRVTF-LGFVPDE----DLPALYAAADVFVLPSLYE--GFG 289
Query: 440 EILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFAR 499
+L++A+ P++A D+ I + V+D G L P + +AL IL+++ + ++ R
Sbjct: 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPEL---RR 346
Query: 500 NIASIGRRSVKNL-----MALETIEGY 521
+ R V +A T E Y
Sbjct: 347 RLGEAARERVAERFSWDRVAARTEEVY 373
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 48.8 bits (115), Expect = 6e-06
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 414 EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLF 473
+ ++ +L +ADV + S E F +L++A+ P+IA D+ I + V+D G L
Sbjct: 267 DEELAELLASADVFVLPSLSE--GFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV 324
Query: 474 PKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLK 530
P +++ L + Q++ + ++ + R + E L E +L
Sbjct: 325 PPGDVEELADALEQLLEDPELR--EELGEAARERVEEEFSWERIAEQLLELYEELLA 379
|
Length = 381 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 416 DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPK 475
++D DV++ S E FP ++ +AL P+IA D+ + + V D VNG LFP
Sbjct: 255 EIDDFYAEIDVLVVPSIWPE-NFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPP 313
Query: 476 ENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETI 518
+ + L + ++I + + R R +
Sbjct: 314 GDAEDLAAALERLIDDPDLLERLRAGIEPPRSIEDQAEEYLKL 356
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 2e-04
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 420 VLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIK 479
+ + ADV + S L+E FP ++AL P++A D+ I VD V GYL + +
Sbjct: 261 IYSAADVFVVPS-LQE-NFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPE 318
Query: 480 ALTHIILQVITNGKISPFARNIASIGRRSVKN-----LMALETIEGYAML 524
L I ++ + + R +N + A + Y L
Sbjct: 319 DLAEGIEWLLADPDE---REELGEAARELAENEFDSRVQAKRYLSLYEEL 365
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 2e-04
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 28/194 (14%)
Query: 299 NYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLE-HALIL 357
+IPGS ++D ++ DD V V R L + +L
Sbjct: 163 KTVLIPGSGV-------DLDRFS---PSPEPIPEDDPVFLFVA-----RLLKDKGIDELL 207
Query: 358 RALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDV 417
A L ++++++ N + ++E L G V+ + DV
Sbjct: 208 EAARIL-------KAKGPNVRLLLVGDGDEENPAAILEIEKLGLE---GRVEFLGFRDDV 257
Query: 418 DSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKEN 477
+L ADV + S+ E P +L++A+ +P+IA D+ R+ V D VNG+L P +
Sbjct: 258 PELLAAADVFVLPSYRE--GLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGD 315
Query: 478 IKALTHIILQVITN 491
+AL I ++I +
Sbjct: 316 AEALADAIERLIED 329
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 421 LNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKA 480
ADV + S E F +L++A+ P++A D+ I + + D NG L P + +A
Sbjct: 276 YAAADVFVLPSLRE--GFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEA 333
Query: 481 LTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENV 528
L IL+++ + P+ R + RR + E L V
Sbjct: 334 LAEAILRLLAD----PWLRLGRAARRRVAERFSWENVAERLLELYREV 377
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.003
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 416 DVDSVLNTADVVIYG---SFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYL 472
++ +L ADV + E P L + + KP++A + V++ G +
Sbjct: 287 ELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLV 346
Query: 473 FPKENIKALTHIILQVITN 491
P + +AL IL+++ +
Sbjct: 347 VPPGDPEALAAAILELLDD 365
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 774 | |||
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.98 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.98 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.98 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.98 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.98 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.98 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.97 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.97 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.97 | |
| PLN00142 | 815 | sucrose synthase | 99.97 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.97 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.97 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.97 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.97 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.97 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.97 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.97 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.97 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.97 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.97 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.96 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.96 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.95 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.95 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.95 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.94 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.94 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.94 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.93 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.93 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.92 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.91 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.9 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.9 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.89 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.89 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.89 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.88 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.87 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.87 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.85 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.85 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.83 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.83 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.82 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.78 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.77 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.75 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.75 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.74 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.71 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.68 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.66 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.64 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.6 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.59 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.58 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.55 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.55 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.42 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.35 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.27 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.24 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.12 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.11 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.11 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.03 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.02 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 98.96 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.9 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.83 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.81 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.75 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.65 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 98.63 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.62 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.6 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.59 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.59 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.51 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 98.49 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.42 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.41 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.3 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.3 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.27 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.26 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.21 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.04 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.99 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 97.99 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.98 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.94 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.93 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.78 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.66 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.28 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 97.28 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 97.23 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 97.08 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 97.05 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.89 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 96.76 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 96.4 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 96.35 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 95.4 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.01 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 94.84 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 94.73 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 94.6 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 94.59 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 94.57 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 94.05 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 93.74 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 93.71 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 93.71 | |
| PLN02208 | 442 | glycosyltransferase family protein | 93.42 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 93.39 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 93.38 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 92.76 | |
| PLN02764 | 453 | glycosyltransferase family protein | 92.39 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 92.06 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 91.92 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 90.81 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 90.65 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 90.26 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 90.06 | |
| PLN00414 | 446 | glycosyltransferase family protein | 89.77 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 89.56 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 88.31 | |
| PF15024 | 559 | Glyco_transf_18: Glycosyltransferase family 18 | 88.04 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 88.0 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 87.66 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 87.5 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 87.43 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 87.09 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 86.53 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 86.49 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 86.29 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 86.09 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 85.26 | |
| PF10933 | 364 | DUF2827: Protein of unknown function (DUF2827); In | 85.06 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 84.53 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 84.5 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 83.87 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 82.94 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 82.47 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 81.81 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 81.76 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 81.37 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 80.98 |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=329.20 Aligned_cols=358 Identities=15% Similarity=0.169 Sum_probs=266.0
Q ss_pred CCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCC-CcchhhhhhcCccEEEccc--------chhHHHHhhhc
Q 004092 144 KPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLED-GRAHEVWRNIGVPVAILQT--------GREKASFVNWL 214 (774)
Q Consensus 144 k~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~-~~~~~~~~~~gi~i~~l~~--------~~~l~~~i~~~ 214 (774)
+|+|++|+..+..||+|+++.++++.|.+.||++.|++..+ ++........++.+..+.. ...+.++++..
T Consensus 1 ~~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~l~~~ 80 (374)
T TIGR03088 1 RPLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQPGKDVAVYPQLYRLLRQL 80 (374)
T ss_pred CceEEEEeCCCCCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEeCCCCCCChHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999999998654 3333344455666554432 12345567778
Q ss_pred CccEEEEcCCchhHHHHHHHhCCCCCCCE-EEEEcCchhhhhHHHhhhhhhhHHHHHHHH-HHHhccEEEccCCcch-hh
Q 004092 215 NYDGILVNSLEAKVVISNIMQEPFKSLPL-VWTIHEGTLATRARNYASSGQLELLNDWKK-VFNRATVVVFPDYVLP-MM 291 (774)
Q Consensus 215 ~~DIIhvhs~~~~~~l~~Ll~~~~~~ipv-I~tiHg~~l~~~~~k~~~~~~~~li~~~~~-~~~~a~~vv~ps~~~~-~i 291 (774)
+||+||+|+... ....+... ..++|+ +++.|+........... . ....++ ....++.++..+.... ..
T Consensus 81 ~~Divh~~~~~~--~~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~i~vs~~~~~~~ 151 (374)
T TIGR03088 81 RPDIVHTRNLAA--LEAQLPAA-LAGVPARIHGEHGRDVFDLDGSNW---K---YRWLRRLYRPLIHHYVAVSRDLEDWL 151 (374)
T ss_pred CCCEEEEcchhH--HHHHHHHH-hcCCCeEEEeecCcccccchhhHH---H---HHHHHHHHHhcCCeEEEeCHHHHHHH
Confidence 999999998644 22222222 234553 56666532221100000 0 001111 2223455555444421 12
Q ss_pred --cccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhccc
Q 004092 292 --YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSV 369 (774)
Q Consensus 292 --~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~ 369 (774)
..++...++.+|| +|+|...+.+... .....+.+....++.++++++| ++.+. ||++.+++|+..+.++.++
T Consensus 152 ~~~~~~~~~~~~vi~-ngvd~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~~l~~~~~~ 225 (374)
T TIGR03088 152 RGPVKVPPAKIHQIY-NGVDTERFHPSRG-DRSPILPPDFFADESVVVGTVG-RLQAV---KDQPTLVRAFALLVRQLPE 225 (374)
T ss_pred HHhcCCChhhEEEec-cCccccccCCCcc-chhhhhHhhcCCCCCeEEEEEe-cCCcc---cCHHHHHHHHHHHHHhCcc
Confidence 2234567888998 4888744432221 1222333444566778999999 88888 9999999999999877653
Q ss_pred CCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHc
Q 004092 370 ENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCF 448 (774)
Q Consensus 370 ~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~ 448 (774)
...+++|+++| |+.. +.+++.++++++.+ +|.|+|..+|+..+|++||++|+||..| |||++++|||+|
T Consensus 226 ---~~~~~~l~i~G~g~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~v~pS~~E--g~~~~~lEAma~ 295 (374)
T TIGR03088 226 ---GAERLRLVIVGDGPAR----GACEQMVRAAGLAH-LVWLPGERDDVPALMQALDLFVLPSLAE--GISNTILEAMAS 295 (374)
T ss_pred ---cccceEEEEecCCchH----HHHHHHHHHcCCcc-eEEEcCCcCCHHHHHHhcCEEEeccccc--cCchHHHHHHHc
Confidence 11239999999 8765 67889999999988 8999999999999999999999999988 899999999999
Q ss_pred CCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 004092 449 RKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAMLLEN 527 (774)
Q Consensus 449 G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e~ 527 (774)
|+|||+|+.+|..|++.++.+|++++++|+++++++|.+++++ ++.+.+|+++|++.+ ++|+|+.++++|.++|++
T Consensus 296 G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~---~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 296 GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD---PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 999999999999998 689999999999999987
Q ss_pred Hh
Q 004092 528 VL 529 (774)
Q Consensus 528 ll 529 (774)
++
T Consensus 373 ~~ 374 (374)
T TIGR03088 373 LL 374 (374)
T ss_pred hC
Confidence 63
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=323.11 Aligned_cols=352 Identities=16% Similarity=0.165 Sum_probs=262.1
Q ss_pred CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcch--hhhhhcCccEEEcccc-------hh------------HHHHhh--
Q 004092 156 IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAH--EVWRNIGVPVAILQTG-------RE------------KASFVN-- 212 (774)
Q Consensus 156 ~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~--~~~~~~gi~i~~l~~~-------~~------------l~~~i~-- 212 (774)
.||++.++.+|+++|.++||+|+|+|....... ......++.+..++.. .. +...++
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARHE 98 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 699999999999999999999999997543211 1111234444433210 00 011122
Q ss_pred hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhh--hhH-HHHH-HHHHHHhccEEEccCCc-
Q 004092 213 WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSG--QLE-LLND-WKKVFNRATVVVFPDYV- 287 (774)
Q Consensus 213 ~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~--~~~-li~~-~~~~~~~a~~vv~ps~~- 287 (774)
..+||+||+|.... .....++. +..++|+|+|+|+..... ..+.... ... .... .+..+..++.+++.+..
T Consensus 99 ~~~~Diih~h~~~~-~~~~~~~~-~~~~~p~v~t~h~~~~~~--~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~ 174 (405)
T TIGR03449 99 PGYYDLIHSHYWLS-GQVGWLLR-DRWGVPLVHTAHTLAAVK--NAALADGDTPEPEARRIGEQQLVDNADRLIANTDEE 174 (405)
T ss_pred CCCCCeEEechHHH-HHHHHHHH-HhcCCCEEEeccchHHHH--HHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHH
Confidence 14799999998655 34444443 356789999999632111 1111000 000 1111 12355677777776554
Q ss_pred chh--hcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchh
Q 004092 288 LPM--MYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFS 365 (774)
Q Consensus 288 ~~~--i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~ 365 (774)
... ...+.+.+++.+|| +|+|...+. +.++...+.++++++++++++++| ++.+. ||++.+++|++.+.+
T Consensus 175 ~~~~~~~~~~~~~ki~vi~-ngvd~~~~~---~~~~~~~~~~~~~~~~~~~i~~~G-~l~~~---K~~~~li~a~~~l~~ 246 (405)
T TIGR03449 175 ARDLVRHYDADPDRIDVVA-PGADLERFR---PGDRATERARLGLPLDTKVVAFVG-RIQPL---KAPDVLLRAVAELLD 246 (405)
T ss_pred HHHHHHHcCCChhhEEEEC-CCcCHHHcC---CCcHHHHHHhcCCCCCCcEEEEec-CCCcc---cCHHHHHHHHHHHHh
Confidence 221 12345567889999 488874332 223455678889888888999999 88888 999999999999987
Q ss_pred hcccCCCCCCCeEEEEEeCCC-CC-chHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHH
Q 004092 366 EVSVENESNSPIKVMILSGDS-TS-NYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEI 441 (774)
Q Consensus 366 ~~p~~~~~~~~v~LvIvGG~~-~e-~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~ 441 (774)
++|+ .+++|+|+|++. .. .+.+.++++++++++.+ +|.|+|++ +++..+|+.||++|+||..| |||++
T Consensus 247 ~~~~-----~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E--~~g~~ 318 (405)
T TIGR03449 247 RDPD-----RNLRVIVVGGPSGSGLATPDALIELAAELGIAD-RVRFLPPRPPEELVHVYRAADVVAVPSYNE--SFGLV 318 (405)
T ss_pred hCCC-----cceEEEEEeCCCCCcchHHHHHHHHHHHcCCCc-eEEECCCCCHHHHHHHHHhCCEEEECCCCC--CcChH
Confidence 6653 238999999533 22 45678999999999988 89999976 78999999999999999988 89999
Q ss_pred HHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 004092 442 LVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGY 521 (774)
Q Consensus 442 llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y 521 (774)
++|||++|+|||+++.++..|++.++.+|++++++|+++++++|.+++++ ++.+++|++++++.+++|+|+.++++|
T Consensus 319 ~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~---~~~~~~~~~~~~~~~~~fsw~~~~~~~ 395 (405)
T TIGR03449 319 AMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDD---PRTRIRMGAAAVEHAAGFSWAATADGL 395 (405)
T ss_pred HHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 999999999999998889999999999
Q ss_pred HHHHHHHhc
Q 004092 522 AMLLENVLK 530 (774)
Q Consensus 522 ~~L~e~ll~ 530 (774)
.++|.+++.
T Consensus 396 ~~~y~~~~~ 404 (405)
T TIGR03449 396 LSSYRDALA 404 (405)
T ss_pred HHHHHHHhh
Confidence 999998763
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=316.10 Aligned_cols=350 Identities=14% Similarity=0.159 Sum_probs=258.4
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEc---------------ccchhHHH
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAIL---------------QTGREKAS 209 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l---------------~~~~~l~~ 209 (774)
+||+++.. ...||.+.++.++++.|.++||+|+|++....... .....++.+..+ .....+.+
T Consensus 1 mki~~~~~-p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 78 (371)
T cd04962 1 MKIGIVCY-PTYGGSGVVATELGKALARRGHEVHFITSSRPFRL-DEYSPNIFFHEVEVPQYPLFQYPPYDLALASKIAE 78 (371)
T ss_pred CceeEEEE-eCCCCccchHHHHHHHHHhcCCceEEEecCCCcch-hhhccCeEEEEecccccchhhcchhHHHHHHHHHH
Confidence 36777764 35799999999999999999999999987542111 111111111100 01123445
Q ss_pred HhhhcCccEEEEcCCchhHHHHHHHh--CCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc
Q 004092 210 FVNWLNYDGILVNSLEAKVVISNIMQ--EPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV 287 (774)
Q Consensus 210 ~i~~~~~DIIhvhs~~~~~~l~~Ll~--~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~ 287 (774)
.++..+||+||+|+.........+.. ....++|+|+++|+...... .. ... .....+..+..++.+.+.+..
T Consensus 79 ~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~--~~-~~~---~~~~~~~~~~~~d~ii~~s~~ 152 (371)
T cd04962 79 VAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLV--GQ-DPS---FQPATRFSIEKSDGVTAVSES 152 (371)
T ss_pred HHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccc--cc-ccc---chHHHHHHHhhCCEEEEcCHH
Confidence 56678999999997654212222221 11237999999997432210 00 000 011123345567766666555
Q ss_pred chh-hcc-cCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchh
Q 004092 288 LPM-MYS-AFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFS 365 (774)
Q Consensus 288 ~~~-i~~-~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~ 365 (774)
... ... .....++.+||+ ++|...+. .......+.+++..++.++++++| ++.+. ||++.+++|+..+.+
T Consensus 153 ~~~~~~~~~~~~~~i~vi~n-~~~~~~~~---~~~~~~~~~~~~~~~~~~~il~~g-~l~~~---K~~~~li~a~~~l~~ 224 (371)
T cd04962 153 LRQETYELFDITKEIEVIPN-FVDEDRFR---PKPDEALKRRLGAPEGEKVLIHIS-NFRPV---KRIDDVIRIFAKVRK 224 (371)
T ss_pred HHHHHHHhcCCcCCEEEecC-CcCHhhcC---CCchHHHHHhcCCCCCCeEEEEec-ccccc---cCHHHHHHHHHHHHh
Confidence 221 111 123467889994 67763222 222344567788888889999999 88888 999999999999876
Q ss_pred hcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHH
Q 004092 366 EVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVK 444 (774)
Q Consensus 366 ~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llE 444 (774)
+ ++ ++++++| |+.. +.+++.++++++.+ +|.|+|+.+++.++|+.||++|+||..| |||++++|
T Consensus 225 ~-~~-------~~l~i~G~g~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~d~~v~ps~~E--~~~~~~~E 289 (371)
T cd04962 225 E-VP-------ARLLLVGDGPER----SPAERLARELGLQD-DVLFLGKQDHVEELLSIADLFLLPSEKE--SFGLAALE 289 (371)
T ss_pred c-CC-------ceEEEEcCCcCH----HHHHHHHHHcCCCc-eEEEecCcccHHHHHHhcCEEEeCCCcC--CCccHHHH
Confidence 5 34 7999999 7655 67888999999987 8999999999999999999999999988 89999999
Q ss_pred HHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHH
Q 004092 445 ALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAM 523 (774)
Q Consensus 445 AMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~ 523 (774)
||+||+|||+|+.++..|++.++.+|++++++|+++++++|..++++ ++.+.+|++++++.+ ++|+|+.++++|.+
T Consensus 290 Ama~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 366 (371)
T cd04962 290 AMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLED---DELWQEFSRAARNRAAERFDSERIVPQYEA 366 (371)
T ss_pred HHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 999999999999996 78999999999999
Q ss_pred HHHHH
Q 004092 524 LLENV 528 (774)
Q Consensus 524 L~e~l 528 (774)
+|+++
T Consensus 367 ~y~~~ 371 (371)
T cd04962 367 LYRRL 371 (371)
T ss_pred HHHhC
Confidence 99863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=324.67 Aligned_cols=353 Identities=14% Similarity=0.153 Sum_probs=257.7
Q ss_pred CCCCeEEEEec---CCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEE---------------Eccc
Q 004092 142 YRKPQLALVFP---DLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVA---------------ILQT 203 (774)
Q Consensus 142 ~rk~rialV~~---~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~---------------~l~~ 203 (774)
.+|+||++++. ....||++.++.++++.|.++||+|+|++...+... .. .++.+. ....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~-~~--~g~~v~~~~~~~~~~~~~~~~~~~~ 132 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQ-EF--HGAKVIGSWSFPCPFYQKVPLSLAL 132 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCc-cc--cCceeeccCCcCCccCCCceeeccC
Confidence 77899998864 335799999999999999999999999997653211 11 111110 0111
Q ss_pred chhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhh-hhhhHHHHHHHHHHHhccEEE
Q 004092 204 GREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYAS-SGQLELLNDWKKVFNRATVVV 282 (774)
Q Consensus 204 ~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~-~~~~~li~~~~~~~~~a~~vv 282 (774)
...+...++..+||+||+|++........++. +..++|+|++.|+....+ ...+.. .....+....+..+..++.++
T Consensus 133 ~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~a-k~~~ip~V~~~h~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~ad~ii 210 (465)
T PLN02871 133 SPRIISEVARFKPDLIHASSPGIMVFGALFYA-KLLCVPLVMSYHTHVPVY-IPRYTFSWLVKPMWDIIRFLHRAADLTL 210 (465)
T ss_pred CHHHHHHHHhCCCCEEEECCCchhHHHHHHHH-HHhCCCEEEEEecCchhh-hhcccchhhHHHHHHHHHHHHhhCCEEE
Confidence 12455667778999999998765322233332 356799999999742111 111110 001111112233456677777
Q ss_pred ccCCcchh--hccc-CCCCCEEEeCCCCCCcccccccCchhhHHHHHHhC-CCCCCEEEEEEecccccccccccHHHHHH
Q 004092 283 FPDYVLPM--MYSA-FDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMG-FKPDDLVIAIVGTQFMYRGLWLEHALILR 358 (774)
Q Consensus 283 ~ps~~~~~--i~~~-v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lg-l~~~~~vIl~vGsrl~~~KgiKg~~lLLe 358 (774)
+.+..... .... .+..++.+|| +|+|...+.+... ....+.++. ..+++++|+++| ++.+. ||++.+++
T Consensus 211 ~~S~~~~~~l~~~~~~~~~kv~vi~-nGvd~~~f~p~~~--~~~~~~~~~~~~~~~~~i~~vG-rl~~~---K~~~~li~ 283 (465)
T PLN02871 211 VTSPALGKELEAAGVTAANRIRVWN-KGVDSESFHPRFR--SEEMRARLSGGEPEKPLIVYVG-RLGAE---KNLDFLKR 283 (465)
T ss_pred ECCHHHHHHHHHcCCCCcCeEEEeC-CccCccccCCccc--cHHHHHHhcCCCCCCeEEEEeC-CCchh---hhHHHHHH
Confidence 76655321 1122 2356788898 4888754433211 233455543 345678899999 88888 99999999
Q ss_pred HHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCc
Q 004092 359 ALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEE 435 (774)
Q Consensus 359 A~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~ 435 (774)
+++.+ |+ ++|+|+| |+.. +.++++++. . +|.|+|++ +++..+|+.||++|+||..|
T Consensus 284 a~~~~----~~-------~~l~ivG~G~~~----~~l~~~~~~----~-~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E- 342 (465)
T PLN02871 284 VMERL----PG-------ARLAFVGDGPYR----EELEKMFAG----T-PTVFTGMLQGDELSQAYASGDVFVMPSESE- 342 (465)
T ss_pred HHHhC----CC-------cEEEEEeCChHH----HHHHHHhcc----C-CeEEeccCCHHHHHHHHHHCCEEEECCccc-
Confidence 98765 35 8999999 7654 667777662 3 69999988 78999999999999999988
Q ss_pred CCccHHHHHHHHcCCCEEEcCCccccccccc---CccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhc
Q 004092 436 QTFPEILVKALCFRKPIIAPDLSNIRKYVDD---RVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNL 512 (774)
Q Consensus 436 qGfp~~llEAMA~G~PVIatd~ggi~EiV~d---g~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~f 512 (774)
+||++++||||||+|||+|+.+|+.|++.+ +.+|++++++|+++++++|.++++| ++.+++|++++++.+++|
T Consensus 343 -~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~~f 418 (465)
T PLN02871 343 -TLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD---PELRERMGAAAREEVEKW 418 (465)
T ss_pred -ccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHhC
Confidence 899999999999999999999999999998 9999999999999999999999999 999999999999999999
Q ss_pred CHHHHHHHHHH-HHHHHhcC
Q 004092 513 MALETIEGYAM-LLENVLKL 531 (774)
Q Consensus 513 s~~~~a~~y~~-L~e~ll~~ 531 (774)
+|+.+++++.+ .|+.++..
T Consensus 419 sw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 419 DWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999999997 69887653
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=332.61 Aligned_cols=355 Identities=11% Similarity=0.105 Sum_probs=257.5
Q ss_pred CCCCC-eEEEEecCCCCChHHHHHHHHHHHHHHcCC------------eEEEEEc----CCC--cchhhhhhcCccEEEc
Q 004092 141 GYRKP-QLALVFPDLLIDPQQLQMVTIAIALREIGY------------AIQVYSL----EDG--RAHEVWRNIGVPVAIL 201 (774)
Q Consensus 141 ~~rk~-rialV~~~L~~GG~e~~v~~Lak~L~~~G~------------eV~V~t~----~~~--~~~~~~~~~gi~i~~l 201 (774)
..++. ||++|++++..||+|+++.+|+.+|...++ .+.|++. ..+ .....+...|+++..+
T Consensus 277 ~~~~~~rIl~vi~sl~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~Gv~v~~l 356 (694)
T PRK15179 277 PESFVGPVLMINGSLGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADAGIPVSVY 356 (694)
T ss_pred CCCCcceEEEEeCCCCCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhCCCeEEEe
Confidence 45677 899999999999999999999999999965 3444442 222 2333455667776555
Q ss_pred ccc------------------------------hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEE-EEcCc
Q 004092 202 QTG------------------------------REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVW-TIHEG 250 (774)
Q Consensus 202 ~~~------------------------------~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~-tiHg~ 250 (774)
... ..+..+++..+|||||+|+.... .+..+.. +..++|+|+ +.|+.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~-~lg~lAa-~~~gvPvIv~t~h~~ 434 (694)
T PRK15179 357 SDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSI-FACALAA-LLAGVPRIVLSVRTM 434 (694)
T ss_pred ccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHH-HHHHHHH-HHcCCCEEEEEeCCC
Confidence 321 22344567789999999988773 4444443 345688876 56753
Q ss_pred hhhhhHHHhhhhhhhHHHHHHHHHHHhcc-EEEccCCc-ch--h-hcccCCCCCEEEeCCCCCCcccccccCchhhHHHH
Q 004092 251 TLATRARNYASSGQLELLNDWKKVFNRAT-VVVFPDYV-LP--M-MYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVR 325 (774)
Q Consensus 251 ~l~~~~~k~~~~~~~~li~~~~~~~~~a~-~vv~ps~~-~~--~-i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR 325 (774)
+.......+. . .... .+.. +...+ .+.+.++. .. + ...+++.+++.+|| +|+|...+...+.. ...+
T Consensus 435 ~~~~~~~~~~-~-~~~~--l~~~-l~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~-NGVd~~~f~~~~~~--~~~~ 506 (694)
T PRK15179 435 PPVDRPDRYR-V-EYDI--IYSE-LLKMRGVALSSNSQFAAHRYADWLGVDERRIPVVY-NGLAPLKSVQDDAC--TAMM 506 (694)
T ss_pred ccccchhHHH-H-HHHH--HHHH-HHhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEEC-CCcCHHhcCCCchh--hHHH
Confidence 2211111110 0 0000 0111 11112 22222222 11 1 12346667899999 48887444321111 1111
Q ss_pred HH--hCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcC
Q 004092 326 VK--MGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLH 402 (774)
Q Consensus 326 ~~--lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lg 402 (774)
.. ...+++.++|+++| |+.+. ||++.+++|+..+.+++|+ ++|+|+| |+.. +.+++++++++
T Consensus 507 ~~~~~~~~~~~~vIg~VG-RL~~~---KG~~~LI~A~a~l~~~~p~-------~~LvIvG~G~~~----~~L~~l~~~lg 571 (694)
T PRK15179 507 AQFDARTSDARFTVGTVM-RVDDN---KRPFLWVEAAQRFAASHPK-------VRFIMVGGGPLL----ESVREFAQRLG 571 (694)
T ss_pred HhhccccCCCCeEEEEEE-eCCcc---CCHHHHHHHHHHHHHHCcC-------eEEEEEccCcch----HHHHHHHHHcC
Confidence 11 22345567899999 89998 9999999999999988888 9999999 7765 78899999999
Q ss_pred CCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCC--HHH
Q 004092 403 YPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKEN--IKA 480 (774)
Q Consensus 403 L~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d--~e~ 480 (774)
+.+ +|.|+|+++++..+|++||++|+||.+| |||++++|||+||+|||+|+.+|++|+|.++.+|++++++| +++
T Consensus 572 L~~-~V~flG~~~dv~~ll~aaDv~VlpS~~E--gfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~ 648 (694)
T PRK15179 572 MGE-RILFTGLSRRVGYWLTQFNAFLLLSRFE--GLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPD 648 (694)
T ss_pred CCC-cEEEcCCcchHHHHHHhcCEEEeccccc--cchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHH
Confidence 998 9999999999999999999999999998 89999999999999999999999999999999999999876 468
Q ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 004092 481 LTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAMLLE 526 (774)
Q Consensus 481 La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e 526 (774)
++++|.+++.+ ......+++++++.+ ++|+|+.++++|.++|+
T Consensus 649 La~aL~~ll~~---l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 649 VAEALARIHDM---CAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHHHHHhC---hhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999887 656667889999999 68999999999999995
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=321.99 Aligned_cols=353 Identities=15% Similarity=0.126 Sum_probs=250.6
Q ss_pred CCCCChHHHHHHHHHHHHHHcCC--eEEEEEcCCCc------chhhhh--hcCccEEEcccc------------------
Q 004092 153 DLLIDPQQLQMVTIAIALREIGY--AIQVYSLEDGR------AHEVWR--NIGVPVAILQTG------------------ 204 (774)
Q Consensus 153 ~L~~GG~e~~v~~Lak~L~~~G~--eV~V~t~~~~~------~~~~~~--~~gi~i~~l~~~------------------ 204 (774)
+...||++.++.+|++.|.++|| +|+|+|..... ....+. ..|+++..++..
T Consensus 22 ~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~~ 101 (439)
T TIGR02472 22 DADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGPRRYLRKELLWPYLDELA 101 (439)
T ss_pred CCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCCCCCcChhhhhhhHHHHH
Confidence 45579999999999999999997 99999963211 111111 245565555431
Q ss_pred hhHHHHhhh--cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhh---------hh--hhhHHHHHH
Q 004092 205 REKASFVNW--LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYA---------SS--GQLELLNDW 271 (774)
Q Consensus 205 ~~l~~~i~~--~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~---------~~--~~~~li~~~ 271 (774)
..+...++. .+||+||+|+... ..+..++.+ ..++|+|+|.|+...... ..+. .. .....+...
T Consensus 102 ~~l~~~~~~~~~~~DvIH~h~~~~-~~~~~~~~~-~~~~p~V~t~H~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (439)
T TIGR02472 102 DNLLQHLRQQGHLPDLIHAHYADA-GYVGARLSR-LLGVPLIFTGHSLGREKR-RRLLAAGLKPQQIEKQYNISRRIEAE 178 (439)
T ss_pred HHHHHHHHHcCCCCCEEEEcchhH-HHHHHHHHH-HhCCCEEEecccccchhh-hhcccCCCChhhhhhhcchHHHHHHH
Confidence 122333443 2699999998765 355555543 567899999996321100 0000 00 001111223
Q ss_pred HHHHHhccEEEccCCc-chh---hcccCCCCCEEEeCCCCCCcccccccCchh-hH---HHHHHhCCCCCCEEEEEEecc
Q 004092 272 KKVFNRATVVVFPDYV-LPM---MYSAFDAGNYYVIPGSPAKAWEADTNMDLY-ND---TVRVKMGFKPDDLVIAIVGTQ 343 (774)
Q Consensus 272 ~~~~~~a~~vv~ps~~-~~~---i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~-k~---~lR~~lgl~~~~~vIl~vGsr 343 (774)
+..+..++.++..+.. ... .+..++.+++.+|| +|+|...+.+..... .. ..+..++..+++++++++| |
T Consensus 179 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIp-nGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG-r 256 (439)
T TIGR02472 179 EETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIP-PGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAIS-R 256 (439)
T ss_pred HHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEEC-CCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEc-C
Confidence 3456677776665433 111 12356678899999 488886554332211 11 1223455667778999999 8
Q ss_pred cccccccccHHHHHHHHHHchhhcccCCCCCCCeEE-EEEe-CCCCCc-------hHHHHHHHHHHcCCCCccEEEccCc
Q 004092 344 FMYRGLWLEHALILRALLPLFSEVSVENESNSPIKV-MILS-GDSTSN-------YSVVIEAIAHNLHYPLGVVKHMAAE 414 (774)
Q Consensus 344 l~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~L-vIvG-G~~~e~-------Y~~~L~~la~~lgL~~~~V~flG~~ 414 (774)
+.+. ||++.+++|++.+...... .++ +|+| |+..+. +.+.++.++.++++.+ +|.|+|++
T Consensus 257 l~~~---Kg~~~li~A~~~l~~~~~~-------~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~-~V~f~g~~ 325 (439)
T TIGR02472 257 PDRR---KNIPSLVEAYGRSPKLQEM-------ANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYG-KVAYPKHH 325 (439)
T ss_pred Cccc---CCHHHHHHHHHhChhhhhh-------ccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCc-eEEecCCC
Confidence 8988 9999999999875322111 233 3567 654432 2344667788899998 99999964
Q ss_pred --ccHHHHHHHc----CEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHH
Q 004092 415 --GDVDSVLNTA----DVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQV 488 (774)
Q Consensus 415 --~dl~~~l~aa----DI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~L 488 (774)
+++..+|+.| |+||+||..| |||++++||||||+|||+|+.+|++|++.++.+|++++++|+++|+++|.++
T Consensus 326 ~~~~~~~~~~~a~~~~Dv~v~pS~~E--~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~l 403 (439)
T TIGR02472 326 RPDDVPELYRLAARSRGIFVNPALTE--PFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDA 403 (439)
T ss_pred CHHHHHHHHHHHhhcCCEEecccccC--CcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHH
Confidence 8899999987 9999999998 8999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 004092 489 ITNGKISPFARNIASIGRRSV-KNLMALETIEGYAMLLE 526 (774)
Q Consensus 489 l~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e 526 (774)
++| ++.+++|+++|++.+ ++|+|+.++++|.++++
T Consensus 404 l~~---~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 404 LSD---SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HhC---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999 999999999999998 67999999999998863
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=316.03 Aligned_cols=346 Identities=12% Similarity=0.118 Sum_probs=255.6
Q ss_pred eEEEEecCC--CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcc-hhhhhhcCccEEEcccc---------------hhH
Q 004092 146 QLALVFPDL--LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRA-HEVWRNIGVPVAILQTG---------------REK 207 (774)
Q Consensus 146 rialV~~~L--~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~-~~~~~~~gi~i~~l~~~---------------~~l 207 (774)
||++|.+.. ..||+++++..+++.|.++||+|.|++...+.. ...+...++++..++.. ..+
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~~l 80 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFPLL 80 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHHHH
Confidence 467776644 469999999999999999999999999754321 11222334444433221 123
Q ss_pred HHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc
Q 004092 208 ASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV 287 (774)
Q Consensus 208 ~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~ 287 (774)
...+...+||+||+|++........++..+..++|+|++.|+..... ......... ..+..+..++.+++.+..
T Consensus 81 ~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~---~~~~~~~~~---~~~~~~~~~d~ii~~s~~ 154 (398)
T cd03796 81 RNILIRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFA---DASSIHTNK---LLRFSLADVDHVICVSHT 154 (398)
T ss_pred HHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEeccccccc---chhhHHhhH---HHHHhhccCCEEEEecHh
Confidence 34556689999999997653233333333466799999999632110 000000011 112234566777766655
Q ss_pred ch---hhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHch
Q 004092 288 LP---MMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLF 364 (774)
Q Consensus 288 ~~---~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~ 364 (774)
.. .....++.+++.+|| +|+|...+.+... ..+++.++++++| ++.+. ||++.+++|+..+.
T Consensus 155 ~~~~~~~~~~~~~~k~~vi~-ngvd~~~f~~~~~----------~~~~~~~~i~~~g-rl~~~---Kg~~~li~a~~~l~ 219 (398)
T cd03796 155 SKENTVLRASLDPERVSVIP-NAVDSSDFTPDPS----------KRDNDKITIVVIS-RLVYR---KGIDLLVGIIPEIC 219 (398)
T ss_pred HhhHHHHHhCCChhhEEEEc-CccCHHHcCCCcc----------cCCCCceEEEEEe-ccchh---cCHHHHHHHHHHHH
Confidence 32 233456667899999 4788643322111 1245678999999 88888 99999999999998
Q ss_pred hhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHH
Q 004092 365 SEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEI 441 (774)
Q Consensus 365 ~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~ 441 (774)
++.|+ ++|+|+| |+.. +.++++++++++.+ +|.|+|++ +++..+|++||++|+||..| |||++
T Consensus 220 ~~~~~-------~~l~i~G~g~~~----~~l~~~~~~~~l~~-~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E--~~g~~ 285 (398)
T cd03796 220 KKHPN-------VRFIIGGDGPKR----ILLEEMREKYNLQD-RVELLGAVPHERVRDVLVQGHIFLNTSLTE--AFCIA 285 (398)
T ss_pred hhCCC-------EEEEEEeCCchH----HHHHHHHHHhCCCC-eEEEeCCCCHHHHHHHHHhCCEEEeCChhh--ccCHH
Confidence 88888 9999999 7654 77889999999998 99999986 78999999999999999988 89999
Q ss_pred HHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHH
Q 004092 442 LVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEG 520 (774)
Q Consensus 442 llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~ 520 (774)
++||||||+|||+|+.+|.+|++.++. +++++ .|+++++++|.+++++ +.....+++++++.+ ++|+|+.++++
T Consensus 286 ~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l~~---~~~~~~~~~~~~~~~~~~fs~~~~~~~ 360 (398)
T cd03796 286 IVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAISI---LRTGKHDPWSFHNRVKKMYSWEDVAKR 360 (398)
T ss_pred HHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHHhC---hhhhhhHHHHHHHHHHhhCCHHHHHHH
Confidence 999999999999999999999998764 55554 4899999999999998 766667788888877 67999999999
Q ss_pred HHHHHHHHhcC
Q 004092 521 YAMLLENVLKL 531 (774)
Q Consensus 521 y~~L~e~ll~~ 531 (774)
|.++|+.++..
T Consensus 361 ~~~~y~~l~~~ 371 (398)
T cd03796 361 TEKVYDRILQT 371 (398)
T ss_pred HHHHHHHHhcC
Confidence 99999998763
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=314.02 Aligned_cols=363 Identities=12% Similarity=0.077 Sum_probs=262.2
Q ss_pred CeEEEEecCC--CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCc-c-----------hhhhhhcCccEEEcccch-----
Q 004092 145 PQLALVFPDL--LIDPQQLQMVTIAIALREIGYAIQVYSLEDGR-A-----------HEVWRNIGVPVAILQTGR----- 205 (774)
Q Consensus 145 ~rialV~~~L--~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~-~-----------~~~~~~~gi~i~~l~~~~----- 205 (774)
+||+++.... ..||.+.++..+++.|.++||+|+|+|..+.. . .......++++..++...
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~~~ 80 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQPS 80 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCCcc
Confidence 4788887654 35999999999999999999999999975310 0 001112355555443210
Q ss_pred ---hHH-----------HHhh--hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHH-Hhh-hhhhhHH
Q 004092 206 ---EKA-----------SFVN--WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRAR-NYA-SSGQLEL 267 (774)
Q Consensus 206 ---~l~-----------~~i~--~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~-k~~-~~~~~~l 267 (774)
.+. .+++ ..+||+||+|++........+...+..++|+|+++|+........ ... ......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~ 160 (412)
T PRK10307 81 GLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARL 160 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHH
Confidence 000 0111 168999999987653233333223456789999999632110000 000 0011111
Q ss_pred HH-HHHHHHHhccEEEccCCcchh--hcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEeccc
Q 004092 268 LN-DWKKVFNRATVVVFPDYVLPM--MYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQF 344 (774)
Q Consensus 268 i~-~~~~~~~~a~~vv~ps~~~~~--i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl 344 (774)
.. ..+..+..++.+++.+..... ...+.+..++.+|| +|+|...+.+.........++++++++++++++|+| ++
T Consensus 161 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~-ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-~l 238 (412)
T PRK10307 161 ATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFP-NWSEVARFQPVADADVDALRAQLGLPDGKKIVLYSG-NI 238 (412)
T ss_pred HHHHHHHHHhhCCEEEecCHHHHHHHHHcCCCcccEEEEC-CCcCHhhcCCCCccchHHHHHHcCCCCCCEEEEEcC-cc
Confidence 11 233356678877777665322 22345667899999 488874443322222345788899998889999999 88
Q ss_pred ccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHH
Q 004092 345 MYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVL 421 (774)
Q Consensus 345 ~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l 421 (774)
.+. ||++.+++|++.+. +.++ ++|+|+| |+.. +.++++++++++++ |.|+|++ +++..+|
T Consensus 239 ~~~---kg~~~li~a~~~l~-~~~~-------~~l~ivG~g~~~----~~l~~~~~~~~l~~--v~f~G~~~~~~~~~~~ 301 (412)
T PRK10307 239 GEK---QGLELVIDAARRLR-DRPD-------LIFVICGQGGGK----ARLEKMAQCRGLPN--VHFLPLQPYDRLPALL 301 (412)
T ss_pred ccc---cCHHHHHHHHHHhc-cCCC-------eEEEEECCChhH----HHHHHHHHHcCCCc--eEEeCCCCHHHHHHHH
Confidence 887 99999999999885 4566 9999999 8765 77889999999864 9999976 7899999
Q ss_pred HHcCEEEEcCccCcCC--ccHHHHHHHHcCCCEEEcCCcc--cccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHH
Q 004092 422 NTADVVIYGSFLEEQT--FPEILVKALCFRKPIIAPDLSN--IRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPF 497 (774)
Q Consensus 422 ~aaDI~V~PS~~E~qG--fp~~llEAMA~G~PVIatd~gg--i~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~ 497 (774)
++||++|+||..|..+ +|.+++||||||+|||+|+.+| +.+++. .+|++++++|+++++++|.++++| ++.
T Consensus 302 ~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~---~~~ 376 (412)
T PRK10307 302 KMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQ---ALL 376 (412)
T ss_pred HhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhC---HHH
Confidence 9999999999887311 6889999999999999999876 457776 489999999999999999999999 999
Q ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHhcC
Q 004092 498 ARNIASIGRRSV-KNLMALETIEGYAMLLENVLKL 531 (774)
Q Consensus 498 r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e~ll~~ 531 (774)
+++|+++|++.+ ++|+|+.++++|.++|++++..
T Consensus 377 ~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 377 RPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 999999999999 5799999999999999998753
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=314.26 Aligned_cols=343 Identities=16% Similarity=0.201 Sum_probs=254.6
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcch---hhhh--hcCccEEEcc-----------------
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAH---EVWR--NIGVPVAILQ----------------- 202 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~---~~~~--~~gi~i~~l~----------------- 202 (774)
++|+++++.+- .-.|+.+.+-..+|.++|++|++++...+... .... ...-++..++
T Consensus 1 m~ia~~~~~~P-~~setFi~~ei~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (406)
T PRK15427 1 MKVGFFLLKFP-LSSETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHRASQT 79 (406)
T ss_pred CeEEEEeccCC-ccchhhHHHHHHHHHHcCceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhhhhhH
Confidence 37888888765 67799999999999999999999998553211 1111 1111111110
Q ss_pred --------------cch---hH---------HHHhhhcCccEEEEcCCchhHHHHHHHhCC-CCCCCEEEEEcCchhhhh
Q 004092 203 --------------TGR---EK---------ASFVNWLNYDGILVNSLEAKVVISNIMQEP-FKSLPLVWTIHEGTLATR 255 (774)
Q Consensus 203 --------------~~~---~l---------~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~-~~~ipvI~tiHg~~l~~~ 255 (774)
... .. ...++..+||+||+|+...+ .....+... ..+.|+++|+|+......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~-~~~~~~~~~~~~~~~~~~t~Hg~d~~~~ 158 (406)
T PRK15427 80 LRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAG-VTAAKLRELGVLRGKIATIFHGIDISSR 158 (406)
T ss_pred hhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHH-HHHHHHHHhCCCCCCeEEEEcccccccc
Confidence 000 00 11124468999999998764 444433221 234577889998543311
Q ss_pred HHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch--hhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCC
Q 004092 256 ARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP--MMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPD 333 (774)
Q Consensus 256 ~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~--~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~ 333 (774)
..... .-......+..++.++..+.... +...+++.+++.+|| +|+|...+..... ....+
T Consensus 159 --~~~~~----~~~~~~~~~~~ad~vv~~S~~~~~~l~~~g~~~~ki~vi~-nGvd~~~f~~~~~----------~~~~~ 221 (406)
T PRK15427 159 --EVLNH----YTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPPEKIAVSR-MGVDMTRFSPRPV----------KAPAT 221 (406)
T ss_pred --hhhhh----hhHHHHHHHHhCCEEEECCHHHHHHHHHcCCCHHHEEEcC-CCCCHHHcCCCcc----------ccCCC
Confidence 11100 01123345567777766665422 222355667899998 4888744332111 11235
Q ss_pred CEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEcc
Q 004092 334 DLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMA 412 (774)
Q Consensus 334 ~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG 412 (774)
.+.++++| ++.+. ||++.+++|++.+.+++++ ++++|+| |+.. +.++++++++++.+ +|.|+|
T Consensus 222 ~~~il~vG-rl~~~---Kg~~~ll~a~~~l~~~~~~-------~~l~ivG~G~~~----~~l~~~~~~~~l~~-~V~~~G 285 (406)
T PRK15427 222 PLEIISVA-RLTEK---KGLHVAIEACRQLKEQGVA-------FRYRILGIGPWE----RRLRTLIEQYQLED-VVEMPG 285 (406)
T ss_pred CeEEEEEe-Ccchh---cCHHHHHHHHHHHHhhCCC-------EEEEEEECchhH----HHHHHHHHHcCCCC-eEEEeC
Confidence 56899999 88888 9999999999999888877 9999999 8765 78889999999998 999999
Q ss_pred Cc--ccHHHHHHHcCEEEEcCcc------CcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHH
Q 004092 413 AE--GDVDSVLNTADVVIYGSFL------EEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHI 484 (774)
Q Consensus 413 ~~--~dl~~~l~aaDI~V~PS~~------E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~a 484 (774)
++ +++.++|+.||++|+||.. | |+|++++||||||+|||+|+.+|++|+|.++.+|++++++|+++++++
T Consensus 286 ~~~~~el~~~l~~aDv~v~pS~~~~~g~~E--g~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~a 363 (406)
T PRK15427 286 FKPSHEVKAMLDDADVFLLPSVTGADGDME--GIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQR 363 (406)
T ss_pred CCCHHHHHHHHHhCCEEEECCccCCCCCcc--CccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHH
Confidence 87 7899999999999999974 6 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-cCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 004092 485 ILQVIT-NGKISPFARNIASIGRRSV-KNLMALETIEGYAMLLEN 527 (774)
Q Consensus 485 I~~Ll~-d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e~ 527 (774)
|.++++ | ++.+++|+++|++.+ ++|+|+.+++++.++|++
T Consensus 364 i~~l~~~d---~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 364 LAAFSQLD---TDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHhCC---HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999 9 889999999999999 679999999999999976
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=302.62 Aligned_cols=334 Identities=18% Similarity=0.134 Sum_probs=254.4
Q ss_pred EEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc-----------hhHHHHhhhcCcc
Q 004092 149 LVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG-----------REKASFVNWLNYD 217 (774)
Q Consensus 149 lV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~-----------~~l~~~i~~~~~D 217 (774)
.+++.+..||+++++.++++.|.++||+|.+++... +........++++..+... ..+...++..+||
T Consensus 2 ~~~~~~~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (355)
T cd03819 2 QVLPALESGGVERGTLELARALVERGHRSLVASAGG-RLVAELEAEGSRHIKLPFISKNPLRILLNVARLRRLIREEKVD 80 (355)
T ss_pred ccchhhccCcHHHHHHHHHHHHHHcCCEEEEEcCCC-chHHHHHhcCCeEEEccccccchhhhHHHHHHHHHHHHHcCCC
Confidence 356778889999999999999999999999998644 3333344445544333221 2234456678999
Q ss_pred EEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchh-h--ccc
Q 004092 218 GILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPM-M--YSA 294 (774)
Q Consensus 218 IIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~-i--~~~ 294 (774)
+||+|+.... ....+.. +..++|+|+++|+...... .+...+..++.+.+.+..... . ..+
T Consensus 81 ii~~~~~~~~-~~~~~~~-~~~~~~~i~~~h~~~~~~~--------------~~~~~~~~~~~vi~~s~~~~~~~~~~~~ 144 (355)
T cd03819 81 IVHARSRAPA-WSAYLAA-RRTRPPFVTTVHGFYSVNF--------------RYNAIMARGDRVIAVSNFIADHIRENYG 144 (355)
T ss_pred EEEECCCchh-HHHHHHH-HhcCCCEEEEeCCchhhHH--------------HHHHHHHhcCEEEEeCHHHHHHHHHhcC
Confidence 9999987652 4444333 3557999999997432210 112223455655555444221 1 234
Q ss_pred CCCCCEEEeCCCCCCcccccccCchh--hHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCC
Q 004092 295 FDAGNYYVIPGSPAKAWEADTNMDLY--NDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENE 372 (774)
Q Consensus 295 v~~~ki~vIpg~gvd~~~~~~~~~~~--k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~ 372 (774)
++..++.+||+ |+|...+....... ....+++++.+++.++++++| ++.+. ||++.+++|+..+.+..++
T Consensus 145 ~~~~k~~~i~n-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-r~~~~---Kg~~~li~~~~~l~~~~~~--- 216 (355)
T cd03819 145 VDPDRIRVIPR-GVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPG-RLTRW---KGQEVFIEALARLKKDDPD--- 216 (355)
T ss_pred CChhhEEEecC-CccccccCccccchHHHHHHHHHcCCCCCceEEEEee-ccccc---cCHHHHHHHHHHHHhcCCC---
Confidence 55678899984 77764443322211 223677888888888999999 88887 9999999999999887667
Q ss_pred CCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcC-ccCcCCccHHHHHHHHcCC
Q 004092 373 SNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGS-FLEEQTFPEILVKALCFRK 450 (774)
Q Consensus 373 ~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS-~~E~qGfp~~llEAMA~G~ 450 (774)
++++|+| |+..+.+.+.+++.+.++++.+ +|.|+|+.+++..+|++||++++|| ..| |+|++++||||||+
T Consensus 217 ----~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~l~~ad~~i~ps~~~e--~~~~~l~EA~a~G~ 289 (355)
T cd03819 217 ----VHLLIVGDAQGRRFYYAELLELIKRLGLQD-RVTFVGHCSDMPAAYALADIVVSASTEPE--AFGRTAVEAQAMGR 289 (355)
T ss_pred ----eEEEEEECCcccchHHHHHHHHHHHcCCcc-eEEEcCCcccHHHHHHhCCEEEecCCCCC--CCchHHHHHHhcCC
Confidence 9999999 7766667777888889889987 8999999999999999999999999 666 89999999999999
Q ss_pred CEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHH-HcCCCcHHHHHHHHHHHHHH-HhcCHHHH
Q 004092 451 PIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVI-TNGKISPFARNIASIGRRSV-KNLMALET 517 (774)
Q Consensus 451 PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll-~d~~~~~~r~~m~~~ar~~a-k~fs~~~~ 517 (774)
|||+++.++..|++.++.+|++++++|+++++++|..++ .+ ++.+.+|+++|++.+ ++|++++|
T Consensus 290 PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~---~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 290 PVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLL---PEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHhhhhccC
Confidence 999999999999999998999999999999999997555 57 888999999999999 57998754
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-33 Score=306.75 Aligned_cols=347 Identities=14% Similarity=0.182 Sum_probs=254.2
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh----hh-c-CccEEEcccch--hH----HHH---
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW----RN-I-GVPVAILQTGR--EK----ASF--- 210 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~----~~-~-gi~i~~l~~~~--~l----~~~--- 210 (774)
||+++.+.+..||.++++.++++.|.+.||+|++++..+.+..... .. . +..+ .++... .+ ...
T Consensus 1 ki~~~~~~~~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~ 79 (372)
T cd03792 1 KVLHVNSTPYGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEFFNVTKKFHNALQGADI-ELSEEEKEIYLEWNEENAER 79 (372)
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHHcCCCceEEecCCChhHHHHHHHhhHhhcCCCC-CCCHHHHHHHHHHHHHHhcc
Confidence 5899999999999999999999999999999999988664321110 01 1 2222 121111 00 111
Q ss_pred -hhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch
Q 004092 211 -VNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP 289 (774)
Q Consensus 211 -i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~ 289 (774)
+...+||+||+|++... .+..+. ...++|+|++.|+..... . .. +.......+..++.+++++..
T Consensus 80 ~~~~~~~Dvv~~h~~~~~-~~~~~~--~~~~~~~i~~~H~~~~~~-~-~~-------~~~~~~~~~~~~d~~i~~~~~-- 145 (372)
T cd03792 80 PLLDLDADVVVIHDPQPL-ALPLFK--KKRGRPWIWRCHIDLSSP-N-RR-------VWDFLQPYIEDYDAAVFHLPE-- 145 (372)
T ss_pred ccccCCCCEEEECCCCch-hHHHhh--hcCCCeEEEEeeeecCCC-c-HH-------HHHHHHHHHHhCCEEeecHHH--
Confidence 22458999999988752 332222 234789999999633211 0 00 001112233455655555422
Q ss_pred hhcccCCCCCEEEeCCCCCCccccc--ccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhc
Q 004092 290 MMYSAFDAGNYYVIPGSPAKAWEAD--TNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEV 367 (774)
Q Consensus 290 ~i~~~v~~~ki~vIpg~gvd~~~~~--~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~ 367 (774)
.....+...++ +|| +++|..... .+.+......++++++++++++++++| |+.+. ||++.+++|++.+.+..
T Consensus 146 ~~~~~~~~~~~-vip-ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vg-rl~~~---Kg~~~ll~a~~~l~~~~ 219 (372)
T cd03792 146 YVPPQVPPRKV-IIP-PSIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVS-RFDPW---KDPFGVIDAYRKVKERV 219 (372)
T ss_pred hcCCCCCCceE-EeC-CCCCCCccccCCCCHHHHHHHHHHhCCCCCCcEEEEEe-ccccc---cCcHHHHHHHHHHHhhC
Confidence 11223344444 888 478863211 222223456788899998999999999 99998 99999999999998877
Q ss_pred ccCCCCCCCeEEEEEe-CCCC-CchHHHHHHHHHHcCCCCccEEEccCc----ccHHHHHHHcCEEEEcCccCcCCccHH
Q 004092 368 SVENESNSPIKVMILS-GDST-SNYSVVIEAIAHNLHYPLGVVKHMAAE----GDVDSVLNTADVVIYGSFLEEQTFPEI 441 (774)
Q Consensus 368 p~~~~~~~~v~LvIvG-G~~~-e~Y~~~L~~la~~lgL~~~~V~flG~~----~dl~~~l~aaDI~V~PS~~E~qGfp~~ 441 (774)
|+ ++|+|+| |+.. +.+.+.++++.+..++.+ +|.|+|.. +++..+|++||++++||..| |||++
T Consensus 220 ~~-------~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~E--g~g~~ 289 (372)
T cd03792 220 PD-------PQLVLVGSGATDDPEGWIVYEEVLEYAEGDP-DIHVLTLPPVSDLEVNALQRASTVVLQKSIRE--GFGLT 289 (372)
T ss_pred CC-------CEEEEEeCCCCCCchhHHHHHHHHHHhCCCC-CeEEEecCCCCHHHHHHHHHhCeEEEeCCCcc--CCCHH
Confidence 77 9999999 7653 233444566666678877 89999864 78899999999999999999 89999
Q ss_pred HHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHH
Q 004092 442 LVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEG 520 (774)
Q Consensus 442 llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~ 520 (774)
++||||||+|||+|+.+|+.+++.++.+|++++ ++++++++|.+++++ ++.+++|+++|++.+ ++|+|+.++++
T Consensus 290 ~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~~i~~ll~~---~~~~~~~~~~a~~~~~~~~s~~~~~~~ 364 (372)
T cd03792 290 VTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAVRILYLLRD---PELRRKMGANAREHVRENFLITRHLKD 364 (372)
T ss_pred HHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 999999999999999999999999999999987 567899999999999 999999999999998 68999999999
Q ss_pred HHHHHHHH
Q 004092 521 YAMLLENV 528 (774)
Q Consensus 521 y~~L~e~l 528 (774)
|.++|+++
T Consensus 365 ~~~~~~~~ 372 (372)
T cd03792 365 YLYLISKL 372 (372)
T ss_pred HHHHHHhC
Confidence 99999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=297.03 Aligned_cols=350 Identities=20% Similarity=0.311 Sum_probs=264.0
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCc-chhhhhhcCccEEEcccc---------hhHHHHhhhcC
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGR-AHEVWRNIGVPVAILQTG---------REKASFVNWLN 215 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~-~~~~~~~~gi~i~~l~~~---------~~l~~~i~~~~ 215 (774)
||+++++.+..||+++++..+++.|.+.||+|.+++..... ........++++..+... ..+...++..+
T Consensus 1 ~i~~i~~~~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T cd03807 1 KVLHVITGLDVGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELEEAGVPVYCLGKRPGRPDPGALLRLYKLIRRLR 80 (365)
T ss_pred CeEEEEeeccCccHHHHHHHHHHHhhhccceEEEEecCcchhhhHHHHhcCCeEEEEecccccccHHHHHHHHHHHHhhC
Confidence 68999999999999999999999999999999999875532 223334445555444322 23455567789
Q ss_pred ccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch--hhcc
Q 004092 216 YDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP--MMYS 293 (774)
Q Consensus 216 ~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~--~i~~ 293 (774)
||+||++..... ....+......++|++++.|+...... ..... ............++.+.+.+.... ....
T Consensus 81 ~div~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~ 154 (365)
T cd03807 81 PDVVHTWMYHAD-LYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTR---LVARLRRLLSSFIPLIVANSAAAAEYHQAI 154 (365)
T ss_pred CCEEEecccccc-HHHHHHHHhcCCCcEEEEecCCccccc--chhHh---HHHHHHHHhccccCeEEeccHHHHHHHHHc
Confidence 999999876652 444333332367899999997432211 00000 001111222334444444444322 1222
Q ss_pred cCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCC
Q 004092 294 AFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENES 373 (774)
Q Consensus 294 ~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~ 373 (774)
+++..++.++|+ |+|...+..... .....+++++++++.++++++| ++.+. ||++.+++|+..+.+++++
T Consensus 155 ~~~~~~~~vi~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~G-~~~~~---K~~~~li~a~~~l~~~~~~---- 224 (365)
T cd03807 155 GYPPKKIVVIPN-GVDTERFSPDLD-ARARLREELGLPEDTFLIGIVA-RLHPQ---KDHATLLRAAALLLKKFPN---- 224 (365)
T ss_pred CCChhheeEeCC-CcCHHhcCCccc-chHHHHHhcCCCCCCeEEEEec-ccchh---cCHHHHHHHHHHHHHhCCC----
Confidence 556678888884 777643322211 2445667889988899999999 88887 9999999999999888877
Q ss_pred CCCeEEEEEe-CCCCCchHHHHHHHHH-HcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCC
Q 004092 374 NSPIKVMILS-GDSTSNYSVVIEAIAH-NLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKP 451 (774)
Q Consensus 374 ~~~v~LvIvG-G~~~e~Y~~~L~~la~-~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~P 451 (774)
++++++| |+.. ..++.... ++++.+ +|.+.|..+++..+|+.||++++||..| |+|++++|||+||+|
T Consensus 225 ---~~l~i~G~~~~~----~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~v~ps~~e--~~~~~~~Ea~a~g~P 294 (365)
T cd03807 225 ---ARLLLVGDGPDR----ANLELLALKELGLED-KVILLGERSDVPALLNALDVFVLSSLSE--GFPNVLLEAMACGLP 294 (365)
T ss_pred ---eEEEEecCCcch----hHHHHHHHHhcCCCc-eEEEccccccHHHHHHhCCEEEeCCccc--cCCcHHHHHHhcCCC
Confidence 9999999 7655 44445555 788888 9999999999999999999999999997 899999999999999
Q ss_pred EEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 004092 452 IIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAMLLE 526 (774)
Q Consensus 452 VIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e 526 (774)
||+++.++..|++.+ +|++++++|+++++++|.+++++ ++.+.++++++++.+ ++|+|++++++|.++|+
T Consensus 295 vI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 295 VVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLAD---PALRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred EEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999988 79999999999999999999999 999999999999999 57999999999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=305.81 Aligned_cols=355 Identities=15% Similarity=0.159 Sum_probs=259.6
Q ss_pred CeEEEEecCCC---CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccchh-------H-------
Q 004092 145 PQLALVFPDLL---IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGRE-------K------- 207 (774)
Q Consensus 145 ~rialV~~~L~---~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~~-------l------- 207 (774)
++|++|..... .||++.++.++++.|.+. ++|+|++...+. ....++++........ +
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVRCFGDQR----FDSEGLTVKGYRPWSELKEANKALGTFSVDL 75 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEEcCCCch----hcCCCeEEEEecChhhccchhhhhhhhhHHH
Confidence 46888877664 399999999999999987 788888775432 1122334332221110 0
Q ss_pred HHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHH-HhhhhhhhHHHHHHHHHHHhccEEEccCC
Q 004092 208 ASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRAR-NYASSGQLELLNDWKKVFNRATVVVFPDY 286 (774)
Q Consensus 208 ~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~-k~~~~~~~~li~~~~~~~~~a~~vv~ps~ 286 (774)
.......++|+||+|++... ....+. .+..++|+|+++|+........ ..........-...+..+..++.+++.+.
T Consensus 76 ~~~~~~~~~divh~~~~~~~-~~~~~~-~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~ 153 (388)
T TIGR02149 76 AMANDPVDADVVHSHTWYTF-LAGHLA-KKLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSG 153 (388)
T ss_pred HHhhCCCCCCeEeecchhhh-hHHHHH-HHhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccH
Confidence 11112247999999987663 333333 3456899999999732111000 00000000001122335667787777766
Q ss_pred cchh----hcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHH
Q 004092 287 VLPM----MYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLP 362 (774)
Q Consensus 287 ~~~~----i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~ 362 (774)
.... .+.+++..++.+||+ |+|...+. +......+.+++++++.++++++| ++.+. ||++.+++|++.
T Consensus 154 ~~~~~~~~~~~~~~~~~i~vi~n-g~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~G-rl~~~---Kg~~~li~a~~~ 225 (388)
T TIGR02149 154 GMREDILKYYPDLDPEKVHVIYN-GIDTKEYK---PDDGNVVLDRYGIDRSRPYILFVG-RITRQ---KGVPHLLDAVHY 225 (388)
T ss_pred HHHHHHHHHcCCCCcceEEEecC-CCChhhcC---CCchHHHHHHhCCCCCceEEEEEc-ccccc---cCHHHHHHHHHH
Confidence 5321 122456678899994 77763332 223456788899988889999999 88888 999999999998
Q ss_pred chhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEcc-Cc--ccHHHHHHHcCEEEEcCccCcCCc
Q 004092 363 LFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMA-AE--GDVDSVLNTADVVIYGSFLEEQTF 438 (774)
Q Consensus 363 L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG-~~--~dl~~~l~aaDI~V~PS~~E~qGf 438 (774)
+.. + ++++++| |+...++.+.+++.++.++....+|.+++ .. +++..+|++||++|+||..| ++
T Consensus 226 l~~---~-------~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e--~~ 293 (388)
T TIGR02149 226 IPK---D-------VQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYE--PL 293 (388)
T ss_pred Hhh---c-------CcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCccC--CC
Confidence 853 3 7888888 67666677788888887776433577654 43 78999999999999999998 89
Q ss_pred cHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCH------HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-Hh
Q 004092 439 PEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENI------KALTHIILQVITNGKISPFARNIASIGRRSV-KN 511 (774)
Q Consensus 439 p~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~------e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~ 511 (774)
|++++|||+||+|||+|+.++..|++.++.+|++++++|+ ++++++|.++++| ++.+++|++++++.+ ++
T Consensus 294 g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~---~~~~~~~~~~a~~~~~~~ 370 (388)
T TIGR02149 294 GIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD---PELAKKMGIAGRKRAEEE 370 (388)
T ss_pred ChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998 9999999999999 999999999999998 67
Q ss_pred cCHHHHHHHHHHHHHHHh
Q 004092 512 LMALETIEGYAMLLENVL 529 (774)
Q Consensus 512 fs~~~~a~~y~~L~e~ll 529 (774)
|+|+.++++|.++|++++
T Consensus 371 ~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 371 FSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred CCHHHHHHHHHHHHHhhC
Confidence 999999999999999863
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=300.38 Aligned_cols=344 Identities=19% Similarity=0.244 Sum_probs=252.0
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEccc----------chhHHHHhhhcC
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQT----------GREKASFVNWLN 215 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~----------~~~l~~~i~~~~ 215 (774)
+|+++++++..||++.++.++++.|.+.||+|++++...+..........+. ..+.. ...+..+++..+
T Consensus 1 ~il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (360)
T cd04951 1 KILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPIDATII-LNLNMSKNPLSFLLALWKLRKILRQFK 79 (360)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchhhccce-EEecccccchhhHHHHHHHHHHHHhcC
Confidence 4788999999999999999999999999999999987554322222111111 01111 112344566789
Q ss_pred ccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc-c--hhhc
Q 004092 216 YDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV-L--PMMY 292 (774)
Q Consensus 216 ~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~-~--~~i~ 292 (774)
||+||+|..... .+..+......++|++++.|+............ +.....++.....+.. . ....
T Consensus 80 pdiv~~~~~~~~-~~~~l~~~~~~~~~~v~~~h~~~~~~~~~~~~~----------~~~~~~~~~~~~~s~~~~~~~~~~ 148 (360)
T cd04951 80 PDVVHAHMFHAN-IFARLLRLFLPSPPLICTAHSKNEGGRLRMLAY----------RLTDFLSDLTTNVSKEALDYFIAS 148 (360)
T ss_pred CCEEEEcccchH-HHHHHHHhhCCCCcEEEEeeccCchhHHHHHHH----------HHHhhccCceEEEcHHHHHHHHhc
Confidence 999999987763 555554443557899999996432211111111 1111112211111111 1 1111
Q ss_pred ccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCC
Q 004092 293 SAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENE 372 (774)
Q Consensus 293 ~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~ 372 (774)
..+..+++.+||+ |+|...+... .......++++++.+++++++++| ++.+. ||++.+++|+..+.+++|+
T Consensus 149 ~~~~~~~~~~i~n-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g-~~~~~---kg~~~li~a~~~l~~~~~~--- 219 (360)
T cd04951 149 KAFNANKSFVVYN-GIDTDRFRKD-PARRLKIRNALGVKNDTFVILAVG-RLVEA---KDYPNLLKAFAKLLSDYLD--- 219 (360)
T ss_pred cCCCcccEEEEcc-ccchhhcCcc-hHHHHHHHHHcCcCCCCEEEEEEe-eCchh---cCcHHHHHHHHHHHhhCCC---
Confidence 2245678899994 7776333222 122456788889988899999999 77887 9999999999999888887
Q ss_pred CCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCC
Q 004092 373 SNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKP 451 (774)
Q Consensus 373 ~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~P 451 (774)
++|+|+| |+.. +.+++.++++++.+ +|.|+|+.+++..+|+.||++|+||..| |+|++++|||++|+|
T Consensus 220 ----~~l~i~G~g~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~s~~e--~~~~~~~Ea~a~G~P 288 (360)
T cd04951 220 ----IKLLIAGDGPLR----ATLERLIKALGLSN-RVKLLGLRDDIAAYYNAADLFVLSSAWE--GFGLVVAEAMACELP 288 (360)
T ss_pred ----eEEEEEcCCCcH----HHHHHHHHhcCCCC-cEEEecccccHHHHHHhhceEEeccccc--CCChHHHHHHHcCCC
Confidence 9999999 7765 67788888888887 8999999999999999999999999998 899999999999999
Q ss_pred EEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 004092 452 IIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAMLLE 526 (774)
Q Consensus 452 VIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e 526 (774)
||+++.++..|++.+ +|++++++|+++++++|.+++++. +..+..++++ +..+ ++|+|+.++++|.++|+
T Consensus 289 vI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~--~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 289 VVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMS--GEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred EEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCC--HHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 999999999999987 799999999999999999999650 4455566666 6666 78999999999999986
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=304.36 Aligned_cols=351 Identities=16% Similarity=0.181 Sum_probs=249.3
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchh--hhhhcCccEEEccc------chh---H------
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHE--VWRNIGVPVAILQT------GRE---K------ 207 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~--~~~~~gi~i~~l~~------~~~---l------ 207 (774)
++|+++.+++..||+++++..+|+.|.++||+|+|+|...+.... .....++.+..... ... +
T Consensus 1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 80 (392)
T cd03805 1 LRVAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWLPRSIFGRFHILCAYLRM 80 (392)
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhcchhccCCeeEEEEEeEEEcchhhHhHHHHHHHHHH
Confidence 479999999999999999999999999999999999975433211 11111132222110 000 0
Q ss_pred -H-----HHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhH-HHhhhhhhhHHHH-HHHHHHHhcc
Q 004092 208 -A-----SFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRA-RNYASSGQLELLN-DWKKVFNRAT 279 (774)
Q Consensus 208 -~-----~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~-~k~~~~~~~~li~-~~~~~~~~a~ 279 (774)
. ......++|+||+++.... . ..+. . ..+.|+|+++|........ ...........+. .....+..++
T Consensus 81 ~~~~~~~~~~~~~~~Dvi~~~~~~~~-~-~~~~-~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad 156 (392)
T cd03805 81 LYLALYLLLLPDEKYDVFIVDQVSAC-V-PLLK-L-FSPSKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMAD 156 (392)
T ss_pred HHHHHHHHhcccCCCCEEEEcCcchH-H-HHHH-H-hcCCcEEEEEecChHHhcCCCcHHHHHHHHHHHHHHHHHhhCce
Confidence 0 0234479999999876652 2 2221 1 2237999999952211000 0011111111111 1223566777
Q ss_pred EEEccCCcchh-h---cccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHH
Q 004092 280 VVVFPDYVLPM-M---YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHAL 355 (774)
Q Consensus 280 ~vv~ps~~~~~-i---~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~l 355 (774)
.+++++..... . +......++.+|+ +++|...+..... ...+......++.++++++| ++.+. ||++.
T Consensus 157 ~ii~~s~~~~~~~~~~~~~~~~~~~~vi~-n~vd~~~~~~~~~---~~~~~~~~~~~~~~~i~~~g-rl~~~---Kg~~~ 228 (392)
T cd03805 157 KIVVNSNFTASVFKKTFPSLAKNPREVVY-PCVDTDSFESTSE---DPDPGLLIPKSGKKTFLSIN-RFERK---KNIAL 228 (392)
T ss_pred EEEEcChhHHHHHHHHhcccccCCcceeC-CCcCHHHcCcccc---cccccccccCCCceEEEEEe-eeccc---CChHH
Confidence 77776665322 1 1222233345777 3777643322211 11223345567778999999 88888 99999
Q ss_pred HHHHHHHchhhc---ccCCCCCCCeEEEEEe-CCCC----CchHHHHHHHHHH-cCCCCccEEEccCc--ccHHHHHHHc
Q 004092 356 ILRALLPLFSEV---SVENESNSPIKVMILS-GDST----SNYSVVIEAIAHN-LHYPLGVVKHMAAE--GDVDSVLNTA 424 (774)
Q Consensus 356 LLeA~~~L~~~~---p~~~~~~~~v~LvIvG-G~~~----e~Y~~~L~~la~~-lgL~~~~V~flG~~--~dl~~~l~aa 424 (774)
+++|+..+.++. |+ ++|+++| |+.. ..|.+.+++++++ +++.+ +|.|+|++ +++..+|+.|
T Consensus 229 ll~a~~~l~~~~~~~~~-------~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~-~V~f~g~~~~~~~~~~l~~a 300 (392)
T cd03805 229 AIEAFAILKDKLAEFKN-------VRLVIAGGYDPRVAENVEYLEELQRLAEELLLLED-QVIFLPSISDSQKELLLSSA 300 (392)
T ss_pred HHHHHHHHHhhcccccC-------eEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCc-eEEEeCCCChHHHHHHHhhC
Confidence 999999998876 66 9999999 6542 2466788999998 89998 99999987 6678999999
Q ss_pred CEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 004092 425 DVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASI 504 (774)
Q Consensus 425 DI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ 504 (774)
|++++||..| |||++++||||||+|||+|+.+|..|++.++.+|+++++ |+++++++|.+++++ ++.+++|+++
T Consensus 301 d~~l~~s~~E--~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~---~~~~~~~~~~ 374 (392)
T cd03805 301 RALLYTPSNE--HFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLAND---PDLADRMGAA 374 (392)
T ss_pred eEEEECCCcC--CCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhC---hHHHHHHHHH
Confidence 9999999988 899999999999999999999999999999999999976 899999999999999 9999999999
Q ss_pred HHHHH-HhcCHHHHHHHH
Q 004092 505 GRRSV-KNLMALETIEGY 521 (774)
Q Consensus 505 ar~~a-k~fs~~~~a~~y 521 (774)
|++.+ ++|+|+.+++++
T Consensus 375 a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 375 GRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHhcCHHHHhhhC
Confidence 99998 679999998753
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=313.12 Aligned_cols=359 Identities=16% Similarity=0.161 Sum_probs=254.4
Q ss_pred CeEEEEecCC----CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh-------------------hhhcCccEEEc
Q 004092 145 PQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV-------------------WRNIGVPVAIL 201 (774)
Q Consensus 145 ~rialV~~~L----~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~-------------------~~~~gi~i~~l 201 (774)
++|++|.... ..||...++..|+++|+++||+|.|+++..+..... ....|++++.+
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v 80 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLI 80 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEE
Confidence 4688887753 479999999999999999999999999865432111 01134554433
Q ss_pred cc---------ch---h----------HHHHhhh--cCccEEEEcCCchhHHHHHHHhCC----CCCCCEEEEEcCchhh
Q 004092 202 QT---------GR---E----------KASFVNW--LNYDGILVNSLEAKVVISNIMQEP----FKSLPLVWTIHEGTLA 253 (774)
Q Consensus 202 ~~---------~~---~----------l~~~i~~--~~~DIIhvhs~~~~~~l~~Ll~~~----~~~ipvI~tiHg~~l~ 253 (774)
.. +. . ....+.. .+||+||+|.+.++ .++.++... ..++|+|+|+|+...+
T Consensus 81 ~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~-~~~~~l~~~~~~~~~~~~~v~TiH~~~~~ 159 (466)
T PRK00654 81 DAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTG-LIPALLKEKYWRGYPDIKTVFTIHNLAYQ 159 (466)
T ss_pred eCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHH-HHHHHHHHhhhccCCCCCEEEEcCCCcCC
Confidence 21 00 0 0111222 48999999998874 555555432 2468999999984321
Q ss_pred hhHH--Hh--h-----hhhhhH-----HHHHHHHHHHhccEEEccCCcch-hhcc-----------cCCCCCEEEeCCCC
Q 004092 254 TRAR--NY--A-----SSGQLE-----LLNDWKKVFNRATVVVFPDYVLP-MMYS-----------AFDAGNYYVIPGSP 307 (774)
Q Consensus 254 ~~~~--k~--~-----~~~~~~-----li~~~~~~~~~a~~vv~ps~~~~-~i~~-----------~v~~~ki~vIpg~g 307 (774)
.... .. . ....+. .+...+..+..++.++..+.... .+.. .....++.+|| +|
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~-NG 238 (466)
T PRK00654 160 GLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGIL-NG 238 (466)
T ss_pred CcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEec-CC
Confidence 1000 00 0 000000 01222335566776655554421 1111 12356899999 48
Q ss_pred CCcccccccCc----------------hhhHHHHHHhCCCC-CCEEEEEEecccccccccccHHHHHHHHHHchhhcccC
Q 004092 308 AKAWEADTNMD----------------LYNDTVRVKMGFKP-DDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVE 370 (774)
Q Consensus 308 vd~~~~~~~~~----------------~~k~~lR~~lgl~~-~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~ 370 (774)
+|...+.+... ..+..+++++|+++ +.++++++| |+.++ ||++.+++|++.+.++ +
T Consensus 239 id~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vG-Rl~~~---KG~~~li~a~~~l~~~--~- 311 (466)
T PRK00654 239 IDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVS-RLTEQ---KGLDLVLEALPELLEQ--G- 311 (466)
T ss_pred CCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEee-ccccc---cChHHHHHHHHHHHhc--C-
Confidence 88765543221 11456788999985 678999999 89998 9999999999998754 4
Q ss_pred CCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEE-EccCccc-HHHHHHHcCEEEEcCccCcCCccHHHHHHHH
Q 004092 371 NESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVK-HMAAEGD-VDSVLNTADVVIYGSFLEEQTFPEILVKALC 447 (774)
Q Consensus 371 ~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~-flG~~~d-l~~~l~aaDI~V~PS~~E~qGfp~~llEAMA 447 (774)
++|+|+| |+. .|.+.+++++++++ + +|. +.|+.++ +..+|++||++|+||.+| +||++++|||+
T Consensus 312 ------~~lvivG~g~~--~~~~~l~~l~~~~~--~-~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E--~~gl~~lEAma 378 (466)
T PRK00654 312 ------GQLVLLGTGDP--ELEEAFRALAARYP--G-KVGVQIGYDEALAHRIYAGADMFLMPSRFE--PCGLTQLYALR 378 (466)
T ss_pred ------CEEEEEecCcH--HHHHHHHHHHHHCC--C-cEEEEEeCCHHHHHHHHhhCCEEEeCCCCC--CchHHHHHHHH
Confidence 8999999 643 35678889998775 3 454 5677644 578999999999999999 89999999999
Q ss_pred cCCCEEEcCCcccccccccC------ccEEEEcCCCHHHHHHHHHHHHH---cCCCcHHHHHHHHHHHHHHHhcCHHHHH
Q 004092 448 FRKPIIAPDLSNIRKYVDDR------VNGYLFPKENIKALTHIILQVIT---NGKISPFARNIASIGRRSVKNLMALETI 518 (774)
Q Consensus 448 ~G~PVIatd~ggi~EiV~dg------~~G~Lv~~~d~e~La~aI~~Ll~---d~~~~~~r~~m~~~ar~~ak~fs~~~~a 518 (774)
||+|||++++||+.|+|.++ .+|++++++|+++|+++|.++++ + ++.+.+|++++.+ ++|+|+.++
T Consensus 379 ~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~---~~~~~~~~~~~~~--~~fsw~~~a 453 (466)
T PRK00654 379 YGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQ---PPLWRALQRQAMA--QDFSWDKSA 453 (466)
T ss_pred CCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcC---HHHHHHHHHHHhc--cCCChHHHH
Confidence 99999999999999999887 89999999999999999999887 6 6677788877753 679999999
Q ss_pred HHHHHHHHHHhc
Q 004092 519 EGYAMLLENVLK 530 (774)
Q Consensus 519 ~~y~~L~e~ll~ 530 (774)
++|.++|+++++
T Consensus 454 ~~~~~lY~~~~~ 465 (466)
T PRK00654 454 EEYLELYRRLLG 465 (466)
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=324.21 Aligned_cols=367 Identities=14% Similarity=0.114 Sum_probs=263.8
Q ss_pred CCCCCeEEEEecC-------------CCCChHHHHHHHHHHHHHHcC--CeEEEEEcCCCcch------hh---h-----
Q 004092 141 GYRKPQLALVFPD-------------LLIDPQQLQMVTIAIALREIG--YAIQVYSLEDGRAH------EV---W----- 191 (774)
Q Consensus 141 ~~rk~rialV~~~-------------L~~GG~e~~v~~Lak~L~~~G--~eV~V~t~~~~~~~------~~---~----- 191 (774)
.-+++.|++|..+ -..||+..++..||++|.++| |+|+|+|....+.. .. .
T Consensus 166 ~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~ 245 (1050)
T TIGR02468 166 KEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSS 245 (1050)
T ss_pred ccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccc
Confidence 4456778887663 235889999999999999999 99999998553210 00 0
Q ss_pred --------hhcCccEEEcccc------h--hHH-----------HHhhh--------------cCccEEEEcCCchhHHH
Q 004092 192 --------RNIGVPVAILQTG------R--EKA-----------SFVNW--------------LNYDGILVNSLEAKVVI 230 (774)
Q Consensus 192 --------~~~gi~i~~l~~~------~--~l~-----------~~i~~--------------~~~DIIhvhs~~~~~~l 230 (774)
..-|+.+..+++. . .+. .++.. ..||+||+|...++ ..
T Consensus 246 ~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG-~a 324 (1050)
T TIGR02468 246 ENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAG-DS 324 (1050)
T ss_pred ccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHH-HH
Confidence 1114444443311 0 011 11111 13999999998884 66
Q ss_pred HHHHhCCCCCCCEEEEEcCchhhhhH-HHhhhh-----------h-hhHHHHHHHHHHHhccEEEccCCcc----hhhcc
Q 004092 231 SNIMQEPFKSLPLVWTIHEGTLATRA-RNYASS-----------G-QLELLNDWKKVFNRATVVVFPDYVL----PMMYS 293 (774)
Q Consensus 231 ~~Ll~~~~~~ipvI~tiHg~~l~~~~-~k~~~~-----------~-~~~li~~~~~~~~~a~~vv~ps~~~----~~i~~ 293 (774)
+.++.. ..++|+|+|.|. +.... .+.+.. . ....+...+.....++.++..+... .-.|.
T Consensus 325 a~~L~~-~lgVP~V~T~HS--Lgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~ 401 (1050)
T TIGR02468 325 AALLSG-ALNVPMVLTGHS--LGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYD 401 (1050)
T ss_pred HHHHHH-hhCCCEEEECcc--chhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhc
Confidence 666544 678999999995 22100 000000 0 1122333444666777666655441 11232
Q ss_pred cCC---------------------CCCEEEeCCCCCCcccccccCchh------------------hHHHHHHhCCCCCC
Q 004092 294 AFD---------------------AGNYYVIPGSPAKAWEADTNMDLY------------------NDTVRVKMGFKPDD 334 (774)
Q Consensus 294 ~v~---------------------~~ki~vIpg~gvd~~~~~~~~~~~------------------k~~lR~~lgl~~~~ 334 (774)
.++ ..++.||| +|+|+..|.+..... ...++ .+..++++
T Consensus 402 ~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIP-pGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~-r~~~~pdk 479 (1050)
T TIGR02468 402 GFDVILERKLRARARRGVSCYGRFMPRMAVIP-PGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIM-RFFTNPRK 479 (1050)
T ss_pred cCCchhhhhhhhhhcccccccccCCCCeEEeC-CCCcHHHccCCCccccchhcccccccccccchhhHHHH-hhcccCCC
Confidence 222 23889999 589986665432111 01122 33456778
Q ss_pred EEEEEEecccccccccccHHHHHHHHHHchhhc--ccCCCCCCCeEEEEEe-CCCCC-------chHHHHHHHHHHcCCC
Q 004092 335 LVIAIVGTQFMYRGLWLEHALILRALLPLFSEV--SVENESNSPIKVMILS-GDSTS-------NYSVVIEAIAHNLHYP 404 (774)
Q Consensus 335 ~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~--p~~~~~~~~v~LvIvG-G~~~e-------~Y~~~L~~la~~lgL~ 404 (774)
++|+++| |+.+. ||++.||+|+..+.+.. ++ +. +|+| |+..+ .+...++++++++++.
T Consensus 480 pvIL~VG-RL~p~---KGi~~LIeAf~~L~~l~~~~n-------L~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~ 547 (1050)
T TIGR02468 480 PMILALA-RPDPK---KNITTLVKAFGECRPLRELAN-------LT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLY 547 (1050)
T ss_pred cEEEEEc-CCccc---cCHHHHHHHHHHhHhhccCCC-------EE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCC
Confidence 8999999 99998 99999999999987532 33 65 4667 54322 3446788899999999
Q ss_pred CccEEEccCc--ccHHHHHHHc----CEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCH
Q 004092 405 LGVVKHMAAE--GDVDSVLNTA----DVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENI 478 (774)
Q Consensus 405 ~~~V~flG~~--~dl~~~l~aa----DI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~ 478 (774)
+ +|.|+|+. +++..+|+.| |+||+||.+| +||++++||||||+|||+|+.||+.|+|.++.+|+++++.|+
T Consensus 548 g-~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~E--gFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~ 624 (1050)
T TIGR02468 548 G-QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQ 624 (1050)
T ss_pred C-eEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccC--CCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCH
Confidence 8 99999975 8999999988 6999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Q 004092 479 KALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKL 531 (774)
Q Consensus 479 e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~~ 531 (774)
++||++|.++++| ++.+++|+++|++.+++|+|+.++++|.+.+..++..
T Consensus 625 eaLA~AL~~LL~D---pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~ 674 (1050)
T TIGR02468 625 QAIADALLKLVAD---KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPR 674 (1050)
T ss_pred HHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhcc
Confidence 9999999999999 9999999999999998899999999999999988644
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=301.94 Aligned_cols=329 Identities=14% Similarity=0.169 Sum_probs=242.5
Q ss_pred CCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh-hhhcCccEEEcccc-------------------hhHHHHhh
Q 004092 153 DLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV-WRNIGVPVAILQTG-------------------REKASFVN 212 (774)
Q Consensus 153 ~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~-~~~~gi~i~~l~~~-------------------~~l~~~i~ 212 (774)
.-..||+|+++..+++.|.. +|++++......... ....|+.++.++.. ..+...++
T Consensus 17 ~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (380)
T PRK15484 17 PRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTRLDPLPYSQRILNIAH 93 (380)
T ss_pred CccccHHHHHHHHhhhhccC---CeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhccCchhHHHHHHHHHH
Confidence 34579999999999999943 999999876432222 22333343333221 11222232
Q ss_pred h---cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch
Q 004092 213 W---LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP 289 (774)
Q Consensus 213 ~---~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~ 289 (774)
. .++|+||+|.... .+..+. ....+.|+|.++|+.... ... ..++.+++++....
T Consensus 94 ~~~~~~~~vi~v~~~~~--~~~~~~-~~~~~~~~v~~~h~~~~~----~~~---------------~~~~~ii~~S~~~~ 151 (380)
T PRK15484 94 KFTITKDSVIVIHNSMK--LYRQIR-ERAPQAKLVMHMHNAFEP----ELL---------------DKNAKIIVPSQFLK 151 (380)
T ss_pred hcCCCCCcEEEEeCcHH--hHHHHH-hhCCCCCEEEEEecccCh----hHh---------------ccCCEEEEcCHHHH
Confidence 3 4599999998554 333333 446678999999953111 011 12233333333322
Q ss_pred h-hcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcc
Q 004092 290 M-MYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVS 368 (774)
Q Consensus 290 ~-i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p 368 (774)
. +...+...++.+|| +|+|... +........+++++++++..+++++| ++.+. ||++.+++|+..+.+++|
T Consensus 152 ~~~~~~~~~~~i~vIp-ngvd~~~---~~~~~~~~~~~~~~~~~~~~~il~~G-rl~~~---Kg~~~Li~A~~~l~~~~p 223 (380)
T PRK15484 152 KFYEERLPNADISIVP-NGFCLET---YQSNPQPNLRQQLNISPDETVLLYAG-RISPD---KGILLLMQAFEKLATAHS 223 (380)
T ss_pred HHHHhhCCCCCEEEec-CCCCHHH---cCCcchHHHHHHhCCCCCCeEEEEec-cCccc---cCHHHHHHHHHHHHHhCC
Confidence 1 12223456788998 4888633 33333445677889888888999999 88888 999999999999998888
Q ss_pred cCCCCCCCeEEEEEe-CCC-----CCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccH
Q 004092 369 VENESNSPIKVMILS-GDS-----TSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPE 440 (774)
Q Consensus 369 ~~~~~~~~v~LvIvG-G~~-----~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~ 440 (774)
+ ++|+|+| |+. ...|.+.+++++++++ + +|.|+|++ +++..+|++||++|+||.+++ |||+
T Consensus 224 ~-------~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~-~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E-~f~~ 292 (380)
T PRK15484 224 N-------LKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG--D-RCIMLGGQPPEKMHNYYPLADLVVVPSQVEE-AFCM 292 (380)
T ss_pred C-------eEEEEEeCCccccccchhHHHHHHHHHHHhcC--C-cEEEeCCCCHHHHHHHHHhCCEEEeCCCCcc-cccc
Confidence 8 9999999 643 2346667777887554 4 69999986 689999999999999998633 8999
Q ss_pred HHHHHHHcCCCEEEcCCcccccccccCccEE-EEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHH
Q 004092 441 ILVKALCFRKPIIAPDLSNIRKYVDDRVNGY-LFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETI 518 (774)
Q Consensus 441 ~llEAMA~G~PVIatd~ggi~EiV~dg~~G~-Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a 518 (774)
+++||||||+|||+|+.||++|++.++.+|+ ++++.|+++++++|.++++| ++. .+|++++++.+ ++|+|+.++
T Consensus 293 ~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d---~~~-~~~~~~ar~~~~~~fsw~~~a 368 (380)
T PRK15484 293 VAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLAD---PEL-TQIAEQAKDFVFSKYSWEGVT 368 (380)
T ss_pred HHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcC---HHH-HHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999999999999999999998 56789999999999999999 775 67999999988 789999999
Q ss_pred HHHHHHHHHHh
Q 004092 519 EGYAMLLENVL 529 (774)
Q Consensus 519 ~~y~~L~e~ll 529 (774)
++|.++|++..
T Consensus 369 ~~~~~~l~~~~ 379 (380)
T PRK15484 369 QRFEEQIHNWF 379 (380)
T ss_pred HHHHHHHHHhc
Confidence 99999998753
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=313.86 Aligned_cols=366 Identities=12% Similarity=0.115 Sum_probs=264.4
Q ss_pred CCCCeEEEEecCC----CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh---------------h-----------
Q 004092 142 YRKPQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV---------------W----------- 191 (774)
Q Consensus 142 ~rk~rialV~~~L----~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~---------------~----------- 191 (774)
.++++|++|...+ ..||..-++..|.++|+++||+|.|+.+..+..... +
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 4568999998865 479999999999999999999999999865332100 0
Q ss_pred -hhcCccEEEccc------------c---hhHH----------HHhhh--cCccEEEEcCCchhHHHHHHHhC-----CC
Q 004092 192 -RNIGVPVAILQT------------G---REKA----------SFVNW--LNYDGILVNSLEAKVVISNIMQE-----PF 238 (774)
Q Consensus 192 -~~~gi~i~~l~~------------~---~~l~----------~~i~~--~~~DIIhvhs~~~~~~l~~Ll~~-----~~ 238 (774)
...|++++.+.. + .... .++.. .+|||||||.+.++ +++.++.. .+
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~Ta-LV~pll~~~y~~~~~ 637 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTA-FVAPLYWDLYAPKGF 637 (977)
T ss_pred EEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHH-HHHHHHHHHHhhccC
Confidence 001344443321 1 0111 11222 58999999999984 54333221 24
Q ss_pred CCCCEEEEEcCchhhhhH--HHh---------hh---hh---hhHHHHHHHHHHHhccEEEccCCcch--hh-c------
Q 004092 239 KSLPLVWTIHEGTLATRA--RNY---------AS---SG---QLELLNDWKKVFNRATVVVFPDYVLP--MM-Y------ 292 (774)
Q Consensus 239 ~~ipvI~tiHg~~l~~~~--~k~---------~~---~~---~~~li~~~~~~~~~a~~vv~ps~~~~--~i-~------ 292 (774)
.++|+|+|+|+...+... ..+ .. .. ....+...+..+..++.+...+..+. +. .
T Consensus 638 ~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~ 717 (977)
T PLN02939 638 NSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQ 717 (977)
T ss_pred CCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchH
Confidence 568999999983322110 000 00 00 01113334445555776665544411 11 1
Q ss_pred --ccCCCCCEEEeCCCCCCcccccccCch----------------hhHHHHHHhCCCC---CCEEEEEEecccccccccc
Q 004092 293 --SAFDAGNYYVIPGSPAKAWEADTNMDL----------------YNDTVRVKMGFKP---DDLVIAIVGTQFMYRGLWL 351 (774)
Q Consensus 293 --~~v~~~ki~vIpg~gvd~~~~~~~~~~----------------~k~~lR~~lgl~~---~~~vIl~vGsrl~~~KgiK 351 (774)
-.....++.+|+ +|+|...+.+.... .+..+++++|+++ +.++|++|| |+.++ |
T Consensus 718 ~~L~~~~~Kl~gIl-NGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VG-RL~~Q---K 792 (977)
T PLN02939 718 DTLKFHSKKFVGIL-NGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCIT-RLVPQ---K 792 (977)
T ss_pred HHhccccCCceEEe-cceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEee-cCCcc---c
Confidence 123457889999 48887655443221 1567899999984 468999999 99999 9
Q ss_pred cHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCccc--HHHHHHHcCEEE
Q 004092 352 EHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGD--VDSVLNTADVVI 428 (774)
Q Consensus 352 g~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~d--l~~~l~aaDI~V 428 (774)
|++.+++|+..+.. ++ ++|+|+| |+.. .|.+.++++++++++.+ +|.|+|..++ ...+|++||+||
T Consensus 793 GiDlLleA~~~Ll~--~d-------vqLVIvGdGp~~-~~e~eL~~La~~l~l~d-rV~FlG~~de~lah~IYAaADIFL 861 (977)
T PLN02939 793 GVHLIRHAIYKTAE--LG-------GQFVLLGSSPVP-HIQREFEGIADQFQSNN-NIRLILKYDEALSHSIYAASDMFI 861 (977)
T ss_pred ChHHHHHHHHHHhh--cC-------CEEEEEeCCCcH-HHHHHHHHHHHHcCCCC-eEEEEeccCHHHHHHHHHhCCEEE
Confidence 99999999988764 34 8999999 8643 46678899999999988 8999997744 468999999999
Q ss_pred EcCccCcCCccHHHHHHHHcCCCEEEcCCccccccccc---------CccEEEEcCCCHHHHHHHHHHHHH----cCCCc
Q 004092 429 YGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDD---------RVNGYLFPKENIKALTHIILQVIT----NGKIS 495 (774)
Q Consensus 429 ~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~d---------g~~G~Lv~~~d~e~La~aI~~Ll~----d~~~~ 495 (774)
+||.+| +||++++|||+||+|+|++++||+.|+|.+ +.+|++|++.|+++|+++|.+++. | +
T Consensus 862 mPSr~E--PfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~d---p 936 (977)
T PLN02939 862 IPSMFE--PCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRK---P 936 (977)
T ss_pred ECCCcc--CCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccC---H
Confidence 999999 899999999999999999999999999865 578999999999999999998875 7 7
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Q 004092 496 PFARNIASIGRRSVKNLMALETIEGYAMLLENVLKL 531 (774)
Q Consensus 496 ~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~~ 531 (774)
+.+++|++++. .++|+|+.++++|.++|++++..
T Consensus 937 e~~~~L~~~am--~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 937 EVWKQLVQKDM--NIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred HHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHh
Confidence 88888987653 36899999999999999998754
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=320.13 Aligned_cols=353 Identities=13% Similarity=0.131 Sum_probs=257.6
Q ss_pred CCCCeEEEEecCCC----CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh------------h----------hhcC
Q 004092 142 YRKPQLALVFPDLL----IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV------------W----------RNIG 195 (774)
Q Consensus 142 ~rk~rialV~~~L~----~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~------------~----------~~~g 195 (774)
..+++|++|...+. .||..-++..|+++|+++||+|.|+++..+..... + ..-|
T Consensus 585 ~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G 664 (1036)
T PLN02316 585 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEG 664 (1036)
T ss_pred CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECC
Confidence 34689999987653 69999999999999999999999999865431100 0 0013
Q ss_pred ccEEEcccch----------------h-------HHHHhhh--cCccEEEEcCCchhHHHHHHHhCC-----CCCCCEEE
Q 004092 196 VPVAILQTGR----------------E-------KASFVNW--LNYDGILVNSLEAKVVISNIMQEP-----FKSLPLVW 245 (774)
Q Consensus 196 i~i~~l~~~~----------------~-------l~~~i~~--~~~DIIhvhs~~~~~~l~~Ll~~~-----~~~ipvI~ 245 (774)
++++.+.... + ...++.. .+|||||+|.+.+. .++.++... ..++|+|+
T Consensus 665 V~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~ta-lva~llk~~~~~~~~~~~p~V~ 743 (1036)
T PLN02316 665 LSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSA-PVAWLFKDHYAHYGLSKARVVF 743 (1036)
T ss_pred cEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHH-HHHHHHHHhhhhhccCCCCEEE
Confidence 3333332110 0 0111221 48999999998773 555554321 34689999
Q ss_pred EEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch--hh-cccCC--CCCEEEeCCCCCCcccccccCc--
Q 004092 246 TIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP--MM-YSAFD--AGNYYVIPGSPAKAWEADTNMD-- 318 (774)
Q Consensus 246 tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~--~i-~~~v~--~~ki~vIpg~gvd~~~~~~~~~-- 318 (774)
|+|+....... ....+..++.++..+..+. +. ...+. ..++.+|+| |+|...+.+...
T Consensus 744 TiHnl~~~~n~--------------lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~N-GID~~~w~P~tD~~ 808 (1036)
T PLN02316 744 TIHNLEFGANH--------------IGKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHGILN-GIDPDIWDPYNDNF 808 (1036)
T ss_pred EeCCcccchhH--------------HHHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEEEEC-CccccccCCccccc
Confidence 99963221100 1123445666555544421 11 11222 478999994 888755433211
Q ss_pred --------------hh-hHHHHHHhCCCC-CCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEE
Q 004092 319 --------------LY-NDTVRVKMGFKP-DDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMIL 382 (774)
Q Consensus 319 --------------~~-k~~lR~~lgl~~-~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIv 382 (774)
.. +..+++++|++. +.++|++|| |+.++ ||+++|++|+..+.+. + ++|+|+
T Consensus 809 lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VG-RL~~q---KGvdlLi~Al~~ll~~--~-------~qlVIv 875 (1036)
T PLN02316 809 IPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIIT-RLTHQ---KGIHLIKHAIWRTLER--N-------GQVVLL 875 (1036)
T ss_pred ccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEe-ccccc---cCHHHHHHHHHHHhhc--C-------cEEEEE
Confidence 11 456788999984 678999999 99999 9999999999998753 3 899999
Q ss_pred e-CCCCCchHHHHHHHHHHcCC--CCccEEEccCcccH--HHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCC
Q 004092 383 S-GDSTSNYSVVIEAIAHNLHY--PLGVVKHMAAEGDV--DSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDL 457 (774)
Q Consensus 383 G-G~~~e~Y~~~L~~la~~lgL--~~~~V~flG~~~dl--~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ 457 (774)
| |+. ..|...++++++++++ ++ +|.|.|..++. ..+|++||+||+||.+| +||++.+|||+||+|+|++++
T Consensus 876 G~Gpd-~~~e~~l~~La~~Lg~~~~~-rV~f~g~~de~lah~iyaaADiflmPS~~E--P~GLvqLEAMa~GtppVvs~v 951 (1036)
T PLN02316 876 GSAPD-PRIQNDFVNLANQLHSSHHD-RARLCLTYDEPLSHLIYAGADFILVPSIFE--PCGLTQLTAMRYGSIPVVRKT 951 (1036)
T ss_pred eCCCC-HHHHHHHHHHHHHhCccCCC-eEEEEecCCHHHHHHHHHhCcEEEeCCccc--CccHHHHHHHHcCCCeEEEcC
Confidence 9 765 3567889999998876 45 89998765443 37999999999999999 899999999999999999999
Q ss_pred cccccccccC-------------ccEEEEcCCCHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHH-HhcCHHHHHHHHH
Q 004092 458 SNIRKYVDDR-------------VNGYLFPKENIKALTHIILQVITNGKIS-PFARNIASIGRRSV-KNLMALETIEGYA 522 (774)
Q Consensus 458 ggi~EiV~dg-------------~~G~Lv~~~d~e~La~aI~~Ll~d~~~~-~~r~~m~~~ar~~a-k~fs~~~~a~~y~ 522 (774)
||++|+|.|+ .+|++|++.|+++|+.+|.+++.+ . +....+++.++..+ ++|+|+.++++|.
T Consensus 952 GGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~---~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~ 1028 (1036)
T PLN02316 952 GGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISA---WYDGRDWFNSLCKRVMEQDWSWNRPALDYM 1028 (1036)
T ss_pred CCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 9999999874 689999999999999999999986 4 34556788888887 6799999999999
Q ss_pred HHHHHHhc
Q 004092 523 MLLENVLK 530 (774)
Q Consensus 523 ~L~e~ll~ 530 (774)
++|+++.+
T Consensus 1029 ~LY~~a~~ 1036 (1036)
T PLN02316 1029 ELYHSARK 1036 (1036)
T ss_pred HHHHHHhC
Confidence 99998753
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-31 Score=288.95 Aligned_cols=351 Identities=15% Similarity=0.140 Sum_probs=250.4
Q ss_pred eEEEEecCC--CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCc-----cEEE----------cccchhHH
Q 004092 146 QLALVFPDL--LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGV-----PVAI----------LQTGREKA 208 (774)
Q Consensus 146 rialV~~~L--~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi-----~i~~----------l~~~~~l~ 208 (774)
||++|++.+ ..||++.++.++++.|.+.||+|++++............... .... ........
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVAYGLNLARYLFPPSLLAW 80 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhccCceeeecccchhhhhhhhhhccChhHHHH
Confidence 578899888 689999999999999999999999999866442222111110 0000 00001111
Q ss_pred HHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhH-HHhhhhhhhHHHHHHHHHHHhccEEEccCCc
Q 004092 209 SFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRA-RNYASSGQLELLNDWKKVFNRATVVVFPDYV 287 (774)
Q Consensus 209 ~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~-~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~ 287 (774)
......++|+||+|+.............+..++|++++.|+....... .......... ..........++.+.+.+..
T Consensus 81 ~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~~ 159 (375)
T cd03821 81 LRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHKALKKRLAW-FLFERRLLQAAAAVHATSEQ 159 (375)
T ss_pred HHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccchhhhHHHH-HHHHHHHHhcCCEEEECCHH
Confidence 223346899999998544222222222234678999999973222110 0001110000 11122344455655555433
Q ss_pred -chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhh
Q 004092 288 -LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSE 366 (774)
Q Consensus 288 -~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~ 366 (774)
...........++.++|+ |+|...+.. ......+..++.+.+.++++++| ++.+. ||++.+++|+..+.++
T Consensus 160 ~~~~~~~~~~~~~~~vi~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---K~~~~li~a~~~l~~~ 231 (375)
T cd03821 160 EAAEIRRLGLKAPIAVIPN-GVDIPPFAA---LPSRGRRRKFPILPDKRIILFLG-RLHPK---KGLDLLIEAFAKLAER 231 (375)
T ss_pred HHHHHHhhCCcccEEEcCC-CcChhccCc---chhhhhhhhccCCCCCcEEEEEe-Ccchh---cCHHHHHHHHHHhhhh
Confidence 223333445578899994 777633322 22111266777888889999999 88887 9999999999999988
Q ss_pred cccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHH
Q 004092 367 VSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILV 443 (774)
Q Consensus 367 ~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~ll 443 (774)
+++ ++++++| ++.. +...++.+++++++.+ +|.|+|++ +++..+|+.||++|+||..| |||++++
T Consensus 232 ~~~-------~~l~i~G~~~~~--~~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~ 299 (375)
T cd03821 232 FPD-------WHLVIAGPDEGG--YRAELKQIAAALGLED-RVTFTGMLYGEDKAAALADADLFVLPSHSE--NFGIVVA 299 (375)
T ss_pred cCC-------eEEEEECCCCcc--hHHHHHHHHHhcCccc-eEEEcCCCChHHHHHHHhhCCEEEeccccC--CCCcHHH
Confidence 888 9999999 5432 3456677778889988 99999988 48999999999999999998 8999999
Q ss_pred HHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHH
Q 004092 444 KALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYA 522 (774)
Q Consensus 444 EAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~ 522 (774)
|||+||+|||+++.++..+++.+ ..|++++. ++++++++|.+++++ ++.+++|++++++.+ ++|+|+.++++|.
T Consensus 300 Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 300 EALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRALEL---PQRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99999999999999999999988 67888875 569999999999999 999999999999996 7899999999875
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-31 Score=305.14 Aligned_cols=357 Identities=15% Similarity=0.170 Sum_probs=254.4
Q ss_pred CeEEEEecCC----CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh--------------------------hhc
Q 004092 145 PQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW--------------------------RNI 194 (774)
Q Consensus 145 ~rialV~~~L----~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~--------------------------~~~ 194 (774)
++|++|.... ..||...++..|+++|+++||+|.|+++..+...... ...
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 4678887753 4799999999999999999999999998664322111 011
Q ss_pred CccEEEccc----------c-----hhH----------HHHhhh--cCccEEEEcCCchhHHHHHHHhCCCC--CCCEEE
Q 004092 195 GVPVAILQT----------G-----REK----------ASFVNW--LNYDGILVNSLEAKVVISNIMQEPFK--SLPLVW 245 (774)
Q Consensus 195 gi~i~~l~~----------~-----~~l----------~~~i~~--~~~DIIhvhs~~~~~~l~~Ll~~~~~--~ipvI~ 245 (774)
+++++.+.. + ... ..+++. .+||+||+|.+.+. .+..++..... ++|+|+
T Consensus 81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~-~~~~~l~~~~~~~~~~~v~ 159 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTA-LVPALLKAVYRPNPIKTVF 159 (473)
T ss_pred CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHH-HHHHHHHhhccCCCCCEEE
Confidence 333332211 1 010 111222 58999999998773 55655544333 489999
Q ss_pred EEcCchhhh--hHHHhhh----------hh--hhHHHHHHHHHHHhccEEEccCCcch-hhc---c--c------CCCCC
Q 004092 246 TIHEGTLAT--RARNYAS----------SG--QLELLNDWKKVFNRATVVVFPDYVLP-MMY---S--A------FDAGN 299 (774)
Q Consensus 246 tiHg~~l~~--~~~k~~~----------~~--~~~li~~~~~~~~~a~~vv~ps~~~~-~i~---~--~------v~~~k 299 (774)
|+|+..... ....+.. .. ....+...+..+..++.++..+.... .+. . + ....+
T Consensus 160 TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~k 239 (473)
T TIGR02095 160 TIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGK 239 (473)
T ss_pred EcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCC
Confidence 999733110 0000000 00 00012334446667776666554421 111 0 1 13468
Q ss_pred EEEeCCCCCCcccccccCc----------------hhhHHHHHHhCCCC--CCEEEEEEecccccccccccHHHHHHHHH
Q 004092 300 YYVIPGSPAKAWEADTNMD----------------LYNDTVRVKMGFKP--DDLVIAIVGTQFMYRGLWLEHALILRALL 361 (774)
Q Consensus 300 i~vIpg~gvd~~~~~~~~~----------------~~k~~lR~~lgl~~--~~~vIl~vGsrl~~~KgiKg~~lLLeA~~ 361 (774)
+.+|+ +|+|...+.+... ..+..+++++|++. +.++++++| |+.++ ||++.+++|+.
T Consensus 240 i~~I~-NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~ 314 (473)
T TIGR02095 240 LRGIL-NGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVIS-RLTQQ---KGVDLLLAALP 314 (473)
T ss_pred eEEEe-CCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEe-cCccc---cChHHHHHHHH
Confidence 89999 4888765443221 11456888999986 778999999 89998 99999999999
Q ss_pred HchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccC-c-ccHHHHHHHcCEEEEcCccCcCCc
Q 004092 362 PLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAA-E-GDVDSVLNTADVVIYGSFLEEQTF 438 (774)
Q Consensus 362 ~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~-~-~dl~~~l~aaDI~V~PS~~E~qGf 438 (774)
.+.++ + ++|+|+| |+ +.+.+.+++++++++ + ++.+.+. . +++..+|++||++|+||.+| +|
T Consensus 315 ~l~~~--~-------~~lvi~G~g~--~~~~~~l~~~~~~~~--~-~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E--~~ 378 (473)
T TIGR02095 315 ELLEL--G-------GQLVVLGTGD--PELEEALRELAERYP--G-NVRVIIGYDEALAHLIYAGADFILMPSRFE--PC 378 (473)
T ss_pred HHHHc--C-------cEEEEECCCC--HHHHHHHHHHHHHCC--C-cEEEEEcCCHHHHHHHHHhCCEEEeCCCcC--Cc
Confidence 98754 2 8999999 75 345678888887654 4 5766653 3 55788999999999999999 89
Q ss_pred cHHHHHHHHcCCCEEEcCCcccccccccC------ccEEEEcCCCHHHHHHHHHHHHH----cCCCcHHHHHHHHHHHHH
Q 004092 439 PEILVKALCFRKPIIAPDLSNIRKYVDDR------VNGYLFPKENIKALTHIILQVIT----NGKISPFARNIASIGRRS 508 (774)
Q Consensus 439 p~~llEAMA~G~PVIatd~ggi~EiV~dg------~~G~Lv~~~d~e~La~aI~~Ll~----d~~~~~~r~~m~~~ar~~ 508 (774)
|++++|||+||+|||+++.+|+.|+|.++ .+|+++++.|+++++++|.+++. + ++.+++|++++.+
T Consensus 379 gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~---~~~~~~~~~~~~~- 454 (473)
T TIGR02095 379 GLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQD---PSLWEALQKNAMS- 454 (473)
T ss_pred HHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHhc-
Confidence 99999999999999999999999999987 89999999999999999999988 8 8888899888753
Q ss_pred HHhcCHHHHHHHHHHHHHHH
Q 004092 509 VKNLMALETIEGYAMLLENV 528 (774)
Q Consensus 509 ak~fs~~~~a~~y~~L~e~l 528 (774)
++|+|++++++|.++|+++
T Consensus 455 -~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 455 -QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred -cCCCcHHHHHHHHHHHHhC
Confidence 6799999999999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-31 Score=290.26 Aligned_cols=333 Identities=15% Similarity=0.162 Sum_probs=242.7
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCc--chhhhhhcCccEEEcccc--------hhHHHHhhhcC
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGR--AHEVWRNIGVPVAILQTG--------REKASFVNWLN 215 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~--~~~~~~~~gi~i~~l~~~--------~~l~~~i~~~~ 215 (774)
||+++.+.+..||.++.+.++++.|.+.||+|++++..... ........++.+..+... ..+...++..+
T Consensus 1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
T cd03812 1 KILHIVGTMNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIPARKKNPLKYFKKLYKLIKKNK 80 (358)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHHHHHcCCeEEEecCCCccHHHHHHHHHHHHhcCC
Confidence 58899999999999999999999999999999999986644 223334445554432221 22344456789
Q ss_pred ccEEEEcCCchhHHHHHHHhCCCCCCC-EEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc-hhhcc
Q 004092 216 YDGILVNSLEAKVVISNIMQEPFKSLP-LVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL-PMMYS 293 (774)
Q Consensus 216 ~DIIhvhs~~~~~~l~~Ll~~~~~~ip-vI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~-~~i~~ 293 (774)
||+||+|+.... .+..++... .+.| ++++.|+....... .... ... ..........++.+...+... .....
T Consensus 81 ~Dvv~~~~~~~~-~~~~~~~~~-~~~~~~v~~~~~~~~~~~~--~~~~-~~~-~~~~~~~~~~~~~~i~~s~~~~~~~~~ 154 (358)
T cd03812 81 YDIVHVHGSSAS-GFILLAAKK-AGVKVRIAHSHNTSDSHDK--KKKI-LKY-KVLRKLINRLATDYLACSEEAGKWLFG 154 (358)
T ss_pred CCEEEEeCcchh-HHHHHHHhh-CCCCeEEEEeccccccccc--cchh-hHH-HHHHHHHHhcCCEEEEcCHHHHHHHHh
Confidence 999999998753 444444333 3444 56778863211100 0000 000 011122334455555554442 12222
Q ss_pred cCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCC
Q 004092 294 AFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENES 373 (774)
Q Consensus 294 ~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~ 373 (774)
.+...++.+|| +|+|...+...... +. .+.+.+..+++++++++| ++.+. ||++.+++|+..+.+++|+
T Consensus 155 ~~~~~~~~vi~-ngvd~~~~~~~~~~-~~-~~~~~~~~~~~~~i~~vG-r~~~~---Kg~~~li~a~~~l~~~~~~---- 223 (358)
T cd03812 155 KVKNKKFKVIP-NGIDLEKFIFNEEI-RK-KRRELGILEDKFVIGHVG-RFSEQ---KNHEFLIEIFAELLKKNPN---- 223 (358)
T ss_pred CCCcccEEEEe-ccCcHHHcCCCchh-hh-HHHHcCCCCCCEEEEEEe-ccccc---cChHHHHHHHHHHHHhCCC----
Confidence 24567899999 47776433322111 22 256677788889999999 88888 9999999999999988888
Q ss_pred CCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCE
Q 004092 374 NSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPI 452 (774)
Q Consensus 374 ~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PV 452 (774)
++++|+| |+.. +.+++.++++++.+ +|.++|+.+++.++|+.||++|+||..| |+|++++||||+|+||
T Consensus 224 ---~~l~ivG~g~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~v~ps~~E--~~~~~~lEAma~G~Pv 293 (358)
T cd03812 224 ---AKLLLVGDGELE----EEIKKKVKELGLED-KVIFLGVRNDVPELLQAMDVFLFPSLYE--GLPLVLIEAQASGLPC 293 (358)
T ss_pred ---eEEEEEeCCchH----HHHHHHHHhcCCCC-cEEEecccCCHHHHHHhcCEEEeccccc--CCCHHHHHHHHhCCCE
Confidence 9999999 7765 67778888899988 9999999999999999999999999998 8999999999999999
Q ss_pred EEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Q 004092 453 IAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV 509 (774)
Q Consensus 453 Iatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a 509 (774)
|+|+.+|..+++.++ .|++..++++++++++|.++++| ++.++++...+....
T Consensus 294 I~s~~~~~~~~i~~~-~~~~~~~~~~~~~a~~i~~l~~~---~~~~~~~~~~~~~~~ 346 (358)
T cd03812 294 ILSDTITKEVDLTDL-VKFLSLDESPEIWAEEILKLKSE---DRRERSSESIKKKGL 346 (358)
T ss_pred EEEcCCchhhhhccC-ccEEeCCCCHHHHHHHHHHHHhC---cchhhhhhhhhhccc
Confidence 999999999999884 46777777899999999999999 999888877766554
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-31 Score=308.16 Aligned_cols=362 Identities=10% Similarity=0.059 Sum_probs=252.1
Q ss_pred CCeEEEEecCCC-----------CChHHHHHHHHHHHH--------HHcCC----eEEEEEcCCCcch-----h---hhh
Q 004092 144 KPQLALVFPDLL-----------IDPQQLQMVTIAIAL--------REIGY----AIQVYSLEDGRAH-----E---VWR 192 (774)
Q Consensus 144 k~rialV~~~L~-----------~GG~e~~v~~Lak~L--------~~~G~----eV~V~t~~~~~~~-----~---~~~ 192 (774)
..+|+++..+.. .||+..++..+|++| +++|| +|+|+|....+.. . ...
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~ 334 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVY 334 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccccccccccccc
Confidence 478888888762 699999999999985 68999 7779997543211 0 111
Q ss_pred -hcCccEEEcccch------------------------hHHHHhh-h--cCccEEEEcCCchhHHHHHHHhCCCCCCCEE
Q 004092 193 -NIGVPVAILQTGR------------------------EKASFVN-W--LNYDGILVNSLEAKVVISNIMQEPFKSLPLV 244 (774)
Q Consensus 193 -~~gi~i~~l~~~~------------------------~l~~~i~-~--~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI 244 (774)
.-++.+..+++.. .+...+. . .+||+||+|.+.++ .++.++.+ ..++|.+
T Consensus 335 ~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~g-lva~lla~-~lgVP~v 412 (784)
T TIGR02470 335 GTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGN-LVASLLAR-KLGVTQC 412 (784)
T ss_pred CCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchH-HHHHHHHH-hcCCCEE
Confidence 1233333333111 0111111 1 36999999999884 77766654 6789999
Q ss_pred EEEcCchh-hhhHHHhhhhhh------hHHHHHHHHHHHhccEEEccCCc----------------------chhhcccC
Q 004092 245 WTIHEGTL-ATRARNYASSGQ------LELLNDWKKVFNRATVVVFPDYV----------------------LPMMYSAF 295 (774)
Q Consensus 245 ~tiHg~~l-~~~~~k~~~~~~------~~li~~~~~~~~~a~~vv~ps~~----------------------~~~i~~~v 295 (774)
.|.|.-.. .++......... ..-+..-....+.++.++..+.. +.-+.+++
T Consensus 413 ~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGi 492 (784)
T TIGR02470 413 TIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGI 492 (784)
T ss_pred EECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCc
Confidence 99995110 000000000000 00011111234445555544421 01112344
Q ss_pred --CCCCEEEeCCCCCCcccccccCchh-h---------------HHHHHHhCC--CCCCEEEEEEecccccccccccHHH
Q 004092 296 --DAGNYYVIPGSPAKAWEADTNMDLY-N---------------DTVRVKMGF--KPDDLVIAIVGTQFMYRGLWLEHAL 355 (774)
Q Consensus 296 --~~~ki~vIpg~gvd~~~~~~~~~~~-k---------------~~lR~~lgl--~~~~~vIl~vGsrl~~~KgiKg~~l 355 (774)
...++.+|| +|+|...|.++.... + ...++.+|+ ++++++|+++| |+.+. ||++.
T Consensus 493 d~~~~Ki~VVp-PGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VG-RL~~~---KGid~ 567 (784)
T TIGR02470 493 DVFDPKFNIVS-PGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMA-RLDRV---KNLTG 567 (784)
T ss_pred cCCcCCeEEEC-CCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEe-CCCcc---CCHHH
Confidence 346889998 489987666655432 1 122456776 56778999999 99998 99999
Q ss_pred HHHHHHHchhhcccCCCCCCCeEEEEEeC-CCC------C--chHHHHHHHHHHcCCCCccEEEccCc---ccHHHHHH-
Q 004092 356 ILRALLPLFSEVSVENESNSPIKVMILSG-DST------S--NYSVVIEAIAHNLHYPLGVVKHMAAE---GDVDSVLN- 422 (774)
Q Consensus 356 LLeA~~~L~~~~p~~~~~~~~v~LvIvGG-~~~------e--~Y~~~L~~la~~lgL~~~~V~flG~~---~dl~~~l~- 422 (774)
|++|+.++....++ ++|+|+|| ... + .+.+.+.++++++++.+ +|.|+|.+ .++.++|.
T Consensus 568 LIeA~~~l~~l~~~-------~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g-~V~flG~~~~~~~~~elyr~ 639 (784)
T TIGR02470 568 LVECYGRSPKLREL-------VNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHG-QIRWIGAQLNRVRNGELYRY 639 (784)
T ss_pred HHHHHHHhHhhCCC-------eEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCC-eEEEccCcCCcccHHHHHHH
Confidence 99999887544444 89999994 321 1 24467888999999998 99999964 45556654
Q ss_pred ---HcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHH----HcCCCc
Q 004092 423 ---TADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVI----TNGKIS 495 (774)
Q Consensus 423 ---aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll----~d~~~~ 495 (774)
.+|+||+||.+| +||++++||||||+|||+|+.||+.|+|.|+.+|+++++.|+++++++|.+++ .| +
T Consensus 640 iAd~adVfV~PS~~E--pFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~d---p 714 (784)
T TIGR02470 640 IADTKGIFVQPALYE--AFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDED---P 714 (784)
T ss_pred hhccCcEEEECCccc--CCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC---H
Confidence 357999999999 89999999999999999999999999999999999999999999999999886 58 8
Q ss_pred HHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 004092 496 PFARNIASIGRRSV-KNLMALETIEGYAMLL 525 (774)
Q Consensus 496 ~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~ 525 (774)
+.+++|+++|++.+ ++|+|+.+++++.++.
T Consensus 715 ~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 715 SYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 89999999999998 6799999999999886
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-31 Score=301.11 Aligned_cols=362 Identities=14% Similarity=0.138 Sum_probs=256.6
Q ss_pred CCCeEEEEecCC----CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh---------h-------------hcCc
Q 004092 143 RKPQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW---------R-------------NIGV 196 (774)
Q Consensus 143 rk~rialV~~~L----~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~---------~-------------~~gi 196 (774)
++++|++|.... ..||..-++..|.++|+++||+|.|+.+..+...... . ..++
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 81 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGPARLLAARAGGL 81 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCCceEEEEEEEeCCc
Confidence 568899988765 4699999999999999999999999998543321000 0 0123
Q ss_pred cEEEcc----------cc---------hhHHHH----------h----hhcCccEEEEcCCchhHHHHHHHhC-CCCCCC
Q 004092 197 PVAILQ----------TG---------REKASF----------V----NWLNYDGILVNSLEAKVVISNIMQE-PFKSLP 242 (774)
Q Consensus 197 ~i~~l~----------~~---------~~l~~~----------i----~~~~~DIIhvhs~~~~~~l~~Ll~~-~~~~ip 242 (774)
+++.+. .+ ....++ + ...+|||||+|.+.++ .+..++.. ...++|
T Consensus 82 ~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~-l~~~~l~~~~~~~~~ 160 (485)
T PRK14099 82 DLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAG-LAPAYLHYSGRPAPG 160 (485)
T ss_pred eEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHH-HHHHHHHhCCCCCCC
Confidence 322221 00 011111 1 1358999999998874 55554432 134689
Q ss_pred EEEEEcCchhhhhHH-----------Hhhh-hhh--hHHHHHHHHHHHhccEEEccCCcch-hhc---cc--------CC
Q 004092 243 LVWTIHEGTLATRAR-----------NYAS-SGQ--LELLNDWKKVFNRATVVVFPDYVLP-MMY---SA--------FD 296 (774)
Q Consensus 243 vI~tiHg~~l~~~~~-----------k~~~-~~~--~~li~~~~~~~~~a~~vv~ps~~~~-~i~---~~--------v~ 296 (774)
+|+|+|+...+.... .... ... ...+...+..+..++.+...+.... .+. .+ ..
T Consensus 161 ~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~ 240 (485)
T PRK14099 161 TVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQR 240 (485)
T ss_pred EEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhh
Confidence 999999843221100 0000 000 0001223445667777766655522 111 11 13
Q ss_pred CCCEEEeCCCCCCcccccccCch----------------hhHHHHHHhCCCC--CCEEEEEEecccccccccccHHHHHH
Q 004092 297 AGNYYVIPGSPAKAWEADTNMDL----------------YNDTVRVKMGFKP--DDLVIAIVGTQFMYRGLWLEHALILR 358 (774)
Q Consensus 297 ~~ki~vIpg~gvd~~~~~~~~~~----------------~k~~lR~~lgl~~--~~~vIl~vGsrl~~~KgiKg~~lLLe 358 (774)
..++.+|+ +|+|...+.+.... .+..+++++|++. +.++++++| |+.++ ||++.+++
T Consensus 241 ~~ki~vI~-NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~Vg-RL~~~---KG~d~Li~ 315 (485)
T PRK14099 241 ADRLSGIL-NGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVIS-RLSWQ---KGLDLLLE 315 (485)
T ss_pred CCCeEEEe-cCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEe-cCCcc---ccHHHHHH
Confidence 57899999 48887554433221 1456788999974 467888999 89998 99999999
Q ss_pred HHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHH-HHcCEEEEcCccCcC
Q 004092 359 ALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVL-NTADVVIYGSFLEEQ 436 (774)
Q Consensus 359 A~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l-~aaDI~V~PS~~E~q 436 (774)
|+..+.+. + ++|+|+| |+. .+.+.+++++++++ .+ .+.++|+.+++..+| ++||++|+||.+|
T Consensus 316 A~~~l~~~--~-------~~lvivG~G~~--~~~~~l~~l~~~~~-~~-v~~~~G~~~~l~~~~~a~aDifv~PS~~E-- 380 (485)
T PRK14099 316 ALPTLLGE--G-------AQLALLGSGDA--ELEARFRAAAQAYP-GQ-IGVVIGYDEALAHLIQAGADALLVPSRFE-- 380 (485)
T ss_pred HHHHHHhc--C-------cEEEEEecCCH--HHHHHHHHHHHHCC-CC-EEEEeCCCHHHHHHHHhcCCEEEECCccC--
Confidence 99988753 3 8999999 753 35577888888654 22 347999988999987 5699999999998
Q ss_pred CccHHHHHHHHcCCCEEEcCCcccccccccC---------ccEEEEcCCCHHHHHHHHHH---HHHcCCCcHHHHHHHHH
Q 004092 437 TFPEILVKALCFRKPIIAPDLSNIRKYVDDR---------VNGYLFPKENIKALTHIILQ---VITNGKISPFARNIASI 504 (774)
Q Consensus 437 Gfp~~llEAMA~G~PVIatd~ggi~EiV~dg---------~~G~Lv~~~d~e~La~aI~~---Ll~d~~~~~~r~~m~~~ 504 (774)
+||++++|||+||+|+|++++||++|+|.++ .+|+++++.|+++|+++|.+ +++| ++.+++|+++
T Consensus 381 ~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d---~~~~~~l~~~ 457 (485)
T PRK14099 381 PCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFAD---PVAWRRLQRN 457 (485)
T ss_pred CCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcC---HHHHHHHHHH
Confidence 8999999999999988889999999999775 58999999999999999997 6778 8899999998
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 505 GRRSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 505 ar~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
++ .++|+|++++++|.++|++++.
T Consensus 458 ~~--~~~fSw~~~a~~y~~lY~~l~~ 481 (485)
T PRK14099 458 GM--TTDVSWRNPAQHYAALYRSLVA 481 (485)
T ss_pred hh--hhcCChHHHHHHHHHHHHHHHh
Confidence 86 4789999999999999999875
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-31 Score=296.74 Aligned_cols=344 Identities=13% Similarity=0.100 Sum_probs=240.7
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHH----HcCC--------eEEEEEcCCCc--ch----hhhhhcCccEEEcc-----
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALR----EIGY--------AIQVYSLEDGR--AH----EVWRNIGVPVAILQ----- 202 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~----~~G~--------eV~V~t~~~~~--~~----~~~~~~gi~i~~l~----- 202 (774)
+++++.++|..||+|+++.++|-+++ ..|- .|+++|..-.+ .. ......++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (578)
T PRK15490 163 RLALCTGSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGN 242 (578)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchh
Confidence 48999999999999999996655554 4333 56666653211 11 11122333322111
Q ss_pred -------------------------cchhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEE-EEcCchhhhhH
Q 004092 203 -------------------------TGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVW-TIHEGTLATRA 256 (774)
Q Consensus 203 -------------------------~~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~-tiHg~~l~~~~ 256 (774)
....+..+++..+||+||+|...+. .+..+.+. ..++|+++ +.|+..... .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ir~~rpDIVHt~~~~a~-l~g~laA~-lagvpviv~~~h~~~~~~-~ 319 (578)
T PRK15490 243 LFDDATIESPELRLLLSHLPPVCKYGIKHLVPHLCERKLDYLSVWQDGAC-LMIALAAL-IAGVPRIQLGLRGLPPVV-R 319 (578)
T ss_pred hhhhccccchHHHHHHhcCChHHHHHHHHHHHHHHHcCCCEEEEcCcccH-HHHHHHHH-hcCCCEEEEeecccCCcc-h
Confidence 0112344467799999999987763 44444432 45688854 466411000 0
Q ss_pred HHhhh-------------hhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHH
Q 004092 257 RNYAS-------------SGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDT 323 (774)
Q Consensus 257 ~k~~~-------------~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~ 323 (774)
..... ...+ ++..+..... ....+..++.+++.+|| +|+|...+.+.... ...
T Consensus 320 ~r~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~-----------~l~~~lgip~~KI~VIy-NGVD~~rf~p~~~~-~~~ 385 (578)
T PRK15490 320 KRLFKPEYEPLYQALAVVPGVD-FMSNNHCVTR-----------HYADWLKLEAKHFQVVY-NGVLPPSTEPSSEV-PHK 385 (578)
T ss_pred hhHHHHHHHHhhhhceeEecch-hhhccHHHHH-----------HHHHHhCCCHHHEEEEe-CCcchhhcCccchh-hHH
Confidence 00000 0000 1111110000 00011235578899999 48887544332211 112
Q ss_pred HHH--HhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHH
Q 004092 324 VRV--KMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHN 400 (774)
Q Consensus 324 lR~--~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~ 400 (774)
.+. ..+++++.++++++| ++.+. |++..+++|+..+.++.|+ ++|+|+| |+.. +.+++++++
T Consensus 386 ~r~~~~~~l~~~~~vIg~Vg-Rl~~~---Kg~~~LI~A~a~llk~~pd-------irLvIVGdG~~~----eeLk~la~e 450 (578)
T PRK15490 386 IWQQFTQKTQDADTTIGGVF-RFVGD---KNPFAWIDFAARYLQHHPA-------TRFVLVGDGDLR----AEAQKRAEQ 450 (578)
T ss_pred HHHHhhhccCCCCcEEEEEE-EEehh---cCHHHHHHHHHHHHhHCCC-------eEEEEEeCchhH----HHHHHHHHH
Confidence 233 234556677899999 88888 9999999999998888888 9999999 8765 788999999
Q ss_pred cCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHH
Q 004092 401 LHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKA 480 (774)
Q Consensus 401 lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~ 480 (774)
+++.+ +|.|+|+.+|+..+|+++|+||+||.+| |||++++||||||+|||+|+.||.+|+|.++.+|++++++|+++
T Consensus 451 lgL~d-~V~FlG~~~Dv~~~LaaADVfVlPS~~E--Gfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 451 LGILE-RILFVGASRDVGYWLQKMNVFILFSRYE--GLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred cCCCC-cEEECCChhhHHHHHHhCCEEEEccccc--CccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhh
Confidence 99988 9999999999999999999999999998 89999999999999999999999999999999999999999999
Q ss_pred HHHHH---HHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 004092 481 LTHII---LQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAMLLEN 527 (774)
Q Consensus 481 La~aI---~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e~ 527 (774)
+++++ ..+.++ ...+..|+++|++++ ++|+++.|+++|.++|.+
T Consensus 528 La~ai~lA~aL~~l---l~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 528 LDQACRYAEKLVNL---WRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 98887 345555 555567999999999 679999999999999975
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-31 Score=293.10 Aligned_cols=347 Identities=17% Similarity=0.172 Sum_probs=251.7
Q ss_pred CCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchh--hhhhcCccEEEccc------------------chhHHHHhhh
Q 004092 154 LLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHE--VWRNIGVPVAILQT------------------GREKASFVNW 213 (774)
Q Consensus 154 L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~--~~~~~gi~i~~l~~------------------~~~l~~~i~~ 213 (774)
...||+++++.++++.|.++||+|+|++....+... .....++.+..++. ...+...++.
T Consensus 18 ~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (398)
T cd03800 18 ADTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLRFLRR 97 (398)
T ss_pred CCCCceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEecccccccCCChhhcchhHHHHHHHHHHHHHh
Confidence 347999999999999999999999999875432111 11122333332221 0112223344
Q ss_pred c--CccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhh--hhhHHHHHHHHHHHhccEEEccCCcch
Q 004092 214 L--NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASS--GQLELLNDWKKVFNRATVVVFPDYVLP 289 (774)
Q Consensus 214 ~--~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~--~~~~li~~~~~~~~~a~~vv~ps~~~~ 289 (774)
. +||+||+|..... .....+. +..++|+|++.|+............. ............+..++.+++++....
T Consensus 98 ~~~~~Div~~~~~~~~-~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~ 175 (398)
T cd03800 98 EGGRPDLIHAHYWDSG-LVALLLA-RRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEA 175 (398)
T ss_pred cCCCccEEEEecCccc-hHHHHHH-hhcCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHH
Confidence 4 9999999987663 4444443 35679999999973211100000000 001111223446667887777765521
Q ss_pred -hh--cccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhh
Q 004092 290 -MM--YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSE 366 (774)
Q Consensus 290 -~i--~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~ 366 (774)
.. .......++.+|| +|+|...+..... ....+..++.++++++++++| ++.+. ||++.+++|+..+.++
T Consensus 176 ~~~~~~~~~~~~~~~vi~-ng~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~g-r~~~~---k~~~~ll~a~~~l~~~ 248 (398)
T cd03800 176 EELYSLYGAYPRRIRVVP-PGVDLERFTPYGR--AEARRARLLRDPDKPRILAVG-RLDPR---KGIDTLIRAYAELPEL 248 (398)
T ss_pred HHHHHHccccccccEEEC-CCCCccceecccc--hhhHHHhhccCCCCcEEEEEc-ccccc---cCHHHHHHHHHHHHHh
Confidence 11 1122345688898 4777633322211 122255667777888999999 88887 9999999999999987
Q ss_pred cccCCCCCCCeEEEEEe-CCCC--CchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHH
Q 004092 367 VSVENESNSPIKVMILS-GDST--SNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEI 441 (774)
Q Consensus 367 ~p~~~~~~~~v~LvIvG-G~~~--e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~ 441 (774)
.++ ++++++| ++.. +.+...++++++++++.+ +|.|+|++ +++..+|+.||++|+||..| |+|++
T Consensus 249 ~~~-------~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~adi~l~ps~~e--~~~~~ 318 (398)
T cd03800 249 RER-------ANLVIVGGPRDDILAMDEEELRELARELGVID-RVDFPGRVSREDLPALYRAADVFVNPALYE--PFGLT 318 (398)
T ss_pred CCC-------eEEEEEECCCCcchhhhhHHHHHHHHhcCCCc-eEEEeccCCHHHHHHHHHhCCEEEeccccc--ccCcH
Confidence 777 9999999 5432 233456788899999988 99999986 68999999999999999998 89999
Q ss_pred HHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHH
Q 004092 442 LVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEG 520 (774)
Q Consensus 442 llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~ 520 (774)
++|||+||+|||+++.++..|++.++.+|++++++|+++++++|.+++++ ++.+++|++++++.+ ++|+|+.++++
T Consensus 319 l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~---~~~~~~~~~~a~~~~~~~~s~~~~~~~ 395 (398)
T cd03800 319 ALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTD---PALRRRLSRAGLRRARARYTWERVAAR 395 (398)
T ss_pred HHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 999999999999999 78999999998
Q ss_pred HH
Q 004092 521 YA 522 (774)
Q Consensus 521 y~ 522 (774)
|.
T Consensus 396 ~~ 397 (398)
T cd03800 396 LL 397 (398)
T ss_pred Hh
Confidence 86
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-30 Score=278.49 Aligned_cols=332 Identities=20% Similarity=0.251 Sum_probs=250.8
Q ss_pred eEEEEecCCC-CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEE------------cccchhHHHHhh
Q 004092 146 QLALVFPDLL-IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAI------------LQTGREKASFVN 212 (774)
Q Consensus 146 rialV~~~L~-~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~------------l~~~~~l~~~i~ 212 (774)
||+++++.+. .||.++.+..+++.|.+.||+|++++.............++.+.. ......+...++
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYELDPKIKVIDLGDKRDSKLLARFKKLRRLRKLLK 80 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccccCCccceeecccccccchhccccchHHHHHhhc
Confidence 5788999888 999999999999999999999999998765411111111222222 222344566677
Q ss_pred hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhc
Q 004092 213 WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMY 292 (774)
Q Consensus 213 ~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~ 292 (774)
..+||+||+++......+..+.. ..+|++.+.|+........... ....+..+..++.+.+.+.......
T Consensus 81 ~~~~d~i~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~ii~~s~~~~~~~ 150 (348)
T cd03820 81 NNKPDVVISFLTSLLTFLASLGL---KIVKLIVSEHNSPDAYKKRLRR-------LLLRRLLYRRADAVVVLTEEDRALY 150 (348)
T ss_pred ccCCCEEEEcCchHHHHHHHHhh---ccccEEEecCCCccchhhhhHH-------HHHHHHHHhcCCEEEEeCHHHHHHh
Confidence 78999999999873222222221 1159999999743321111000 0023445667777777766653334
Q ss_pred ccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCC
Q 004092 293 SAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENE 372 (774)
Q Consensus 293 ~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~ 372 (774)
......++.++|+ +++...+... ...+.+.++++| ++.+. ||++.+++|+..+.+..|+
T Consensus 151 ~~~~~~~~~vi~~-~~~~~~~~~~-------------~~~~~~~i~~~g-~~~~~---K~~~~l~~~~~~l~~~~~~--- 209 (348)
T cd03820 151 YKKFNKNVVVIPN-PLPFPPEEPS-------------SDLKSKRILAVG-RLVPQ---KGFDLLIEAWAKIAKKHPD--- 209 (348)
T ss_pred hccCCCCeEEecC-CcChhhcccc-------------CCCCCcEEEEEE-eeccc---cCHHHHHHHHHHHHhcCCC---
Confidence 4445678889984 6665221110 245567999999 77777 9999999999999887777
Q ss_pred CCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCC
Q 004092 373 SNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKP 451 (774)
Q Consensus 373 ~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~P 451 (774)
++|+|+| |+.. ..+++.++++++.+ +|.+.|..+++..+|+.||++++||..| |+|++++|||+||+|
T Consensus 210 ----~~l~i~G~~~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~i~ps~~e--~~~~~~~Ea~a~G~P 278 (348)
T cd03820 210 ----WKLRIVGDGPER----EALEALIKELGLED-RVILLGFTKNIEEYYAKASIFVLTSRFE--GFPMVLLEAMAFGLP 278 (348)
T ss_pred ----eEEEEEeCCCCH----HHHHHHHHHcCCCC-eEEEcCCcchHHHHHHhCCEEEeCcccc--ccCHHHHHHHHcCCC
Confidence 9999999 7655 66778888899988 9999999899999999999999999998 899999999999999
Q ss_pred EEEcCCcc-cccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 004092 452 IIAPDLSN-IRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYA 522 (774)
Q Consensus 452 VIatd~gg-i~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~ 522 (774)
||+++.++ ..+++.++.+|+++++.|+++++++|.++++| ++.+++|++++++.+++|+|++++++|.
T Consensus 279 vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 279 VISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED---EELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred EEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 99999754 56677777799999999999999999999999 9999999999988889999999999885
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=292.68 Aligned_cols=344 Identities=15% Similarity=0.133 Sum_probs=237.3
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccch-----------hH-------
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGR-----------EK------- 207 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~-----------~l------- 207 (774)
||+||++++-. +...||++|.++||+|+++|..+...... ++++..+.... .+
T Consensus 1 ~il~~~~~~p~-----~~~~la~~L~~~G~~v~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (396)
T cd03818 1 RILFVHQNFPG-----QFRHLAPALAAQGHEVVFLTEPNAAPPPG----GVRVVRYRPPRGPTSGTHPYLREFEEAVLRG 71 (396)
T ss_pred CEEEECCCCch-----hHHHHHHHHHHCCCEEEEEecCCCCCCCC----CeeEEEecCCCCCCCCCCccchhHHHHHHHH
Confidence 57788887651 24579999999999999999877543221 44544333210 00
Q ss_pred -------HHH-hhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEc------Cchh-hhh--HHHhh-hhhhhHHHH
Q 004092 208 -------ASF-VNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIH------EGTL-ATR--ARNYA-SSGQLELLN 269 (774)
Q Consensus 208 -------~~~-i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiH------g~~l-~~~--~~k~~-~~~~~~li~ 269 (774)
... .+..+||+||+|+...... ++...+.++|+|.+.| +... +.. ..... .........
T Consensus 72 ~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~---~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (396)
T cd03818 72 QAVARALLALRAKGFRPDVIVAHPGWGETL---FLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNA 148 (396)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCccchhh---hHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhh
Confidence 001 1225799999998765322 2223355688887554 3111 100 00000 000000011
Q ss_pred HHHHHHHhccEEEccCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccc
Q 004092 270 DWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGL 349 (774)
Q Consensus 270 ~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~Kg 349 (774)
.....+..++.++.++............+++.+|| +|+|...+.+.... ....+....+.+++++++++|+.+.+.
T Consensus 149 ~~~~~~~~ad~vi~~s~~~~~~~~~~~~~ki~vI~-ngvd~~~f~~~~~~-~~~~~~~~~~~~~~~~i~~vgR~l~~~-- 224 (396)
T cd03818 149 LILLALAQADAGVSPTRWQRSTFPAELRSRISVIH-DGIDTDRLRPDPQA-RLRLPNGRVLTPGDEVITFVARNLEPY-- 224 (396)
T ss_pred HhHHHHHhCCEEECCCHHHHhhCcHhhccceEEeC-CCccccccCCCchh-hhcccccccCCCCCeEEEEECCCcccc--
Confidence 12345677888877766533322222236899999 48887444332211 111222334556778999999338888
Q ss_pred cccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeC-CC--------CCchHHHHHHHHHHcCC---CCccEEEccCc--c
Q 004092 350 WLEHALILRALLPLFSEVSVENESNSPIKVMILSG-DS--------TSNYSVVIEAIAHNLHY---PLGVVKHMAAE--G 415 (774)
Q Consensus 350 iKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG-~~--------~e~Y~~~L~~la~~lgL---~~~~V~flG~~--~ 415 (774)
||++.+++|+..+.++.|+ ++|+|+|+ .. .+.+ .+++.++++. .+ +|.|+|++ +
T Consensus 225 -Kg~~~ll~a~~~l~~~~~~-------~~lvivG~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~-~V~f~G~v~~~ 292 (396)
T cd03818 225 -RGFHVFMRALPRLLRARPD-------ARVVIVGGDGVSYGAPPPDGESW---KQHMLDELGGRLDLS-RVHFLGRVPYD 292 (396)
T ss_pred -cCHHHHHHHHHHHHHHCCC-------cEEEEEcCCCcccCCCCCCcccH---HHHHHHHhhcccCcc-eEEEeCCCCHH
Confidence 9999999999999988888 99999993 21 1112 2333333332 34 79999987 7
Q ss_pred cHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCc
Q 004092 416 DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKIS 495 (774)
Q Consensus 416 dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~ 495 (774)
++..+|+.||++|+||..| ++|++++||||||+|||+|+.+++.|++.++.+|++++++|+++++++|.++++| +
T Consensus 293 ~~~~~l~~adv~v~~s~~e--~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~---~ 367 (396)
T cd03818 293 QYLALLQVSDVHVYLTYPF--VLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDD---P 367 (396)
T ss_pred HHHHHHHhCcEEEEcCccc--ccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhC---H
Confidence 8999999999999999988 8999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHHH-hcCHHHHHHHHH
Q 004092 496 PFARNIASIGRRSVK-NLMALETIEGYA 522 (774)
Q Consensus 496 ~~r~~m~~~ar~~ak-~fs~~~~a~~y~ 522 (774)
+.+.+|+++|++.++ +|+|+.++++|.
T Consensus 368 ~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 368 ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 999999999999995 599999999886
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-30 Score=280.71 Aligned_cols=347 Identities=19% Similarity=0.217 Sum_probs=250.7
Q ss_pred eEEEEecCCC--CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh-hhcCcc----------EEEcccchhHHHHhh
Q 004092 146 QLALVFPDLL--IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW-RNIGVP----------VAILQTGREKASFVN 212 (774)
Q Consensus 146 rialV~~~L~--~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~-~~~gi~----------i~~l~~~~~l~~~i~ 212 (774)
||++|.+... .||.+..+..++++|.+.||+|++++.......... ....++ .........+...++
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPARVVPVPSVPLPGYPEIRLALPPRRRVRRLLD 80 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCCCceeecccccCcccceEecccchhhHHHHHH
Confidence 4677776553 389999999999999999999999997653211100 000000 111122334555667
Q ss_pred hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHH-HHHHHHHHHhccEEEccCCcchhh
Q 004092 213 WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLEL-LNDWKKVFNRATVVVFPDYVLPMM 291 (774)
Q Consensus 213 ~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~l-i~~~~~~~~~a~~vv~ps~~~~~i 291 (774)
..+||+||++++.......... .+..++|+++++|+....+ ............ ....+..+..++.+.+++......
T Consensus 81 ~~~pdii~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~ 158 (364)
T cd03814 81 AFAPDVVHIATPGPLGLAALRA-ARRLGIPVVTSYHTDFPEY-LRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADE 158 (364)
T ss_pred hcCCCEEEEeccchhhHHHHHH-HHHcCCCEEEEEecChHHH-hhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHH
Confidence 7899999999776532333333 2356799999999732221 111111111111 122333556677777776664443
Q ss_pred cccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCC
Q 004092 292 YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVEN 371 (774)
Q Consensus 292 ~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~ 371 (774)
.......++.+++ .|+|...+..... ....+.+++ ..+.++++++| ++.+. ||++.+++|+..+.++ ++
T Consensus 159 ~~~~~~~~~~~~~-~g~~~~~~~~~~~--~~~~~~~~~-~~~~~~i~~~G-~~~~~---k~~~~~i~~~~~l~~~-~~-- 227 (364)
T cd03814 159 LRARGFRRVRLWP-RGVDTELFHPRRR--DEALRARLG-PPDRPVLLYVG-RLAPE---KNLEALLDADLPLRRR-PP-- 227 (364)
T ss_pred HhccCCCceeecC-CCccccccCcccc--cHHHHHHhC-CCCCeEEEEEe-ccccc---cCHHHHHHHHHHhhhc-CC--
Confidence 3334446777887 4777643322211 233445555 55667899999 77777 9999999999999877 77
Q ss_pred CCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHc
Q 004092 372 ESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCF 448 (774)
Q Consensus 372 ~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~ 448 (774)
++++|+| |+.. +.++ +..+ +|.++|+. +++..+|+.||++|+||..| ++|++++|||||
T Consensus 228 -----~~l~i~G~~~~~----~~~~------~~~~-~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e--~~~~~~lEa~a~ 289 (364)
T cd03814 228 -----VRLVIVGDGPAR----ARLE------ARYP-NVHFLGFLDGEELAAAYASADVFVFPSRTE--TFGLVVLEAMAS 289 (364)
T ss_pred -----ceEEEEeCCchH----HHHh------ccCC-cEEEEeccCHHHHHHHHHhCCEEEECcccc--cCCcHHHHHHHc
Confidence 9999999 6654 2232 4555 79999954 78999999999999999998 899999999999
Q ss_pred CCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004092 449 RKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLE 526 (774)
Q Consensus 449 G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e 526 (774)
|+|||+++.++..+++.++.+|+++++.|+++++++|.++++| ++.+++|++++++.+++|+|+++++.+.++|+
T Consensus 290 g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 290 GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLAD---PELRRRMAARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhhC
Confidence 9999999999999999998899999999999999999999999 99999999999999988999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-30 Score=285.59 Aligned_cols=338 Identities=18% Similarity=0.180 Sum_probs=243.8
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcc-hhhhhhcCccEEE--------------cccchhHHHHh
Q 004092 147 LALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRA-HEVWRNIGVPVAI--------------LQTGREKASFV 211 (774)
Q Consensus 147 ialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~-~~~~~~~gi~i~~--------------l~~~~~l~~~i 211 (774)
|+++.+.+.+ +.++++..+++.|. ||++.+++...... .......++.... .........++
T Consensus 2 ~~~~~~~~~~-~~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (367)
T cd05844 2 VLIFRPLLLA-PSETFVRNQAEALR--RFRPVYVGGRRLGPAPLGALAVRLADLAGGKAGLRLGALRLLTGSAPQLRRLL 78 (367)
T ss_pred EEEEeCCCCC-CchHHHHHHHHhcc--cCCcEEEEeeccCCCCCcccceeeeecccchhHHHHHHHHhccccccHHHHHH
Confidence 4555555544 49999999999995 78888887654322 1111222221110 11111233346
Q ss_pred hhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch--
Q 004092 212 NWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP-- 289 (774)
Q Consensus 212 ~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~-- 289 (774)
+..+||+||+|+.... .....+. +..++|+|++.|+............................++.+++.+....
T Consensus 79 ~~~~~dvvh~~~~~~~-~~~~~~~-~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 156 (367)
T cd05844 79 RRHRPDLVHAHFGFDG-VYALPLA-RRLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIRDR 156 (367)
T ss_pred HhhCCCEEEeccCchH-HHHHHHH-HHcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHHHH
Confidence 7789999999976653 3333332 35679999999973221111000000011111223345567777777665532
Q ss_pred hhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhccc
Q 004092 290 MMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSV 369 (774)
Q Consensus 290 ~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~ 369 (774)
....+++..++.++|+ |+|...+... ....+...++++| ++.+. ||++.+++|+..+.+++++
T Consensus 157 ~~~~~~~~~~i~vi~~-g~d~~~~~~~------------~~~~~~~~i~~~G-~~~~~---K~~~~li~a~~~l~~~~~~ 219 (367)
T cd05844 157 LLALGFPPEKVHVHPI-GVDTAKFTPA------------TPARRPPRILFVG-RFVEK---KGPLLLLEAFARLARRVPE 219 (367)
T ss_pred HHHcCCCHHHeEEecC-CCCHHhcCCC------------CCCCCCcEEEEEE-eeccc---cChHHHHHHHHHHHHhCCC
Confidence 2223556678889984 7776322211 1123456899999 77777 9999999999999988888
Q ss_pred CCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCcc------CcCCccH
Q 004092 370 ENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFL------EEQTFPE 440 (774)
Q Consensus 370 ~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~------E~qGfp~ 440 (774)
++|+|+| |+.. +.++++++++++.+ +|.|+|++ +++..+|+.||++|+||.. | |+|+
T Consensus 220 -------~~l~ivG~g~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E--~~~~ 285 (367)
T cd05844 220 -------VRLVIIGDGPLL----AALEALARALGLGG-RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAE--GLPV 285 (367)
T ss_pred -------eEEEEEeCchHH----HHHHHHHHHcCCCC-eEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCcc--CCch
Confidence 9999999 6644 67889999989988 89999987 7899999999999999963 5 8999
Q ss_pred HHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHH
Q 004092 441 ILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIE 519 (774)
Q Consensus 441 ~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~ 519 (774)
+++|||+||+|||+++.++..|++.++.+|++++++|+++++++|.++++| ++.+++|+.++++.+ ++|+|+.+++
T Consensus 286 ~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~---~~~~~~~~~~a~~~~~~~~s~~~~~~ 362 (367)
T cd05844 286 VLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLAD---PDLRARMGAAGRRRVEERFDLRRQTA 362 (367)
T ss_pred HHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 999999999999999 6799999999
Q ss_pred HHHH
Q 004092 520 GYAM 523 (774)
Q Consensus 520 ~y~~ 523 (774)
++.+
T Consensus 363 ~l~~ 366 (367)
T cd05844 363 KLEA 366 (367)
T ss_pred HHhc
Confidence 9875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-30 Score=283.63 Aligned_cols=332 Identities=18% Similarity=0.208 Sum_probs=243.0
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccchhHHHHhhhcCccEEEEcCC
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSL 224 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~~l~~~i~~~~~DIIhvhs~ 224 (774)
++|+++......||.++++..+++.|.++||+|++++.... .+...++..++|+||+|..
T Consensus 1 MkIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~--------------------~~~~~~~~~~~diih~~~~ 60 (365)
T cd03825 1 MKVLHLNTSDISGGAARAAYRLHRALQAAGVDSTMLVQEKK--------------------ALISKIEIINADIVHLHWI 60 (365)
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHHHhcCCceeEEEeecc--------------------hhhhChhcccCCEEEEEcc
Confidence 47899998888899999999999999999999999996543 2344566789999999886
Q ss_pred chhHHHHHHHhCCCCCCCEEEEEcCchhhh-------hHHHh-------------hh-hhhhHHHHHHHHHH-HhccEEE
Q 004092 225 EAKVVISNIMQEPFKSLPLVWTIHEGTLAT-------RARNY-------------AS-SGQLELLNDWKKVF-NRATVVV 282 (774)
Q Consensus 225 ~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~-------~~~k~-------------~~-~~~~~li~~~~~~~-~~a~~vv 282 (774)
.........+.....++|+|+++|+..... ....+ .. .............+ .....++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 140 (365)
T cd03825 61 HGGFLSIEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIV 140 (365)
T ss_pred ccCccCHHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEE
Confidence 542221122211114789999999732110 00000 00 00011111111122 2233445
Q ss_pred ccCCcchh-hcc--cCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEeccccc--ccccccHHHHH
Q 004092 283 FPDYVLPM-MYS--AFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMY--RGLWLEHALIL 357 (774)
Q Consensus 283 ~ps~~~~~-i~~--~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~--~KgiKg~~lLL 357 (774)
.++..... ... .++..++.++|+ |+|...+ .+..+...+..+++++++.+++++| +... . ||++.++
T Consensus 141 ~~s~~~~~~~~~~~~~~~~~~~vi~n-gi~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~---K~~~~ll 212 (365)
T cd03825 141 APSRWLADCARSSSLFKGIPIEVIPN-GIDTTIF---RPRDKREARKRLGLPADKKIILFGA-VGGTDPR---KGFDELI 212 (365)
T ss_pred ehhHHHHHHHHhccccCCCceEEeCC-CCccccc---CCCcHHHHHHHhCCCCCCeEEEEEe-cCCCccc---cCHHHHH
Confidence 55444221 111 245678999994 7877333 2333456677888888887766666 5443 5 9999999
Q ss_pred HHHHHchhh-cccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcc---cHHHHHHHcCEEEEcCc
Q 004092 358 RALLPLFSE-VSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEG---DVDSVLNTADVVIYGSF 432 (774)
Q Consensus 358 eA~~~L~~~-~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~---dl~~~l~aaDI~V~PS~ 432 (774)
+|+..+.++ .++ ++++++| ++.... .++.. +|.++|+.. ++..+|+.||++++||.
T Consensus 213 ~a~~~l~~~~~~~-------~~~~i~G~~~~~~~-----------~~~~~-~v~~~g~~~~~~~~~~~~~~ad~~l~ps~ 273 (365)
T cd03825 213 EALKRLAERWKDD-------IELVVFGASDPEIP-----------PDLPF-PVHYLGSLNDDESLALIYSAADVFVVPSL 273 (365)
T ss_pred HHHHHhhhccCCC-------eEEEEeCCCchhhh-----------ccCCC-ceEecCCcCCHHHHHHHHHhCCEEEeccc
Confidence 999998765 455 9999999 543211 14556 899999874 68899999999999999
Q ss_pred cCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-Hh
Q 004092 433 LEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KN 511 (774)
Q Consensus 433 ~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~ 511 (774)
.| |+|++++|||+||+|||+++.++..|++.++.+|++++..|+++++++|.+++++ ++.+.+|++++++.+ ++
T Consensus 274 ~e--~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~---~~~~~~~~~~~~~~~~~~ 348 (365)
T cd03825 274 QE--NFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLAD---PDEREELGEAARELAENE 348 (365)
T ss_pred cc--cccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHh
Confidence 88 8999999999999999999999999999999899999999999999999999999 998999999999999 57
Q ss_pred cCHHHHHHHHHHHHHHH
Q 004092 512 LMALETIEGYAMLLENV 528 (774)
Q Consensus 512 fs~~~~a~~y~~L~e~l 528 (774)
|+|+.++++|.++|+++
T Consensus 349 ~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 349 FDSRVQAKRYLSLYEEL 365 (365)
T ss_pred cCHHHHHHHHHHHHhhC
Confidence 99999999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-30 Score=273.81 Aligned_cols=339 Identities=17% Similarity=0.217 Sum_probs=245.4
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc-------------hhHHHHhh
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG-------------REKASFVN 212 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~-------------~~l~~~i~ 212 (774)
+|+++.+. .||.+.++..+++.|.+.||+|++++....... .....++.+..++.. ..+...++
T Consensus 1 kIl~i~~~--~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (359)
T cd03808 1 KILHIVTV--DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-ELEALGVKVIPIPLDRRGINPFKDLKALLRLYRLLR 77 (359)
T ss_pred CeeEEEec--chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-ccccCCceEEeccccccccChHhHHHHHHHHHHHHH
Confidence 46777777 799999999999999999999999998664432 223344444333322 12345566
Q ss_pred hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhc
Q 004092 213 WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMY 292 (774)
Q Consensus 213 ~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~ 292 (774)
..+||+||+++.... .+..+........+++++.|+............ .......+..+..++.+.+.+.......
T Consensus 78 ~~~~dvv~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 153 (359)
T cd03808 78 KERPDIVHTHTPKPG-ILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKR---RLYLLLERLALRFTDKVIFQNEDDRDLA 153 (359)
T ss_pred hcCCCEEEEccccch-hHHHHHHHHcCCCCEEEEecCcchhhccchhHH---HHHHHHHHHHHhhccEEEEcCHHHHHHH
Confidence 789999999987663 444444333456788998887332211111100 1111122334455666666655532221
Q ss_pred c--c-CCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhccc
Q 004092 293 S--A-FDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSV 369 (774)
Q Consensus 293 ~--~-v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~ 369 (774)
. . .+..+..++++++++...+..... ...++.+.++++| ++.+. ||++.+++++..+.+++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~~G-~~~~~---k~~~~li~~~~~l~~~~~~ 219 (359)
T cd03808 154 LKLGIIKKKKTVLIPGSGVDLDRFSPSPE----------PIPEDDPVFLFVA-RLLKD---KGIDELLEAARILKAKGPN 219 (359)
T ss_pred HHhcCCCcCceEEecCCCCChhhcCcccc----------ccCCCCcEEEEEe-ccccc---cCHHHHHHHHHHHHhcCCC
Confidence 1 1 111334444456777633222111 0245677999999 88888 9999999999999887777
Q ss_pred CCCCCCCeEEEEEe-CCCCCchHHHHHH-HHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHH
Q 004092 370 ENESNSPIKVMILS-GDSTSNYSVVIEA-IAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALC 447 (774)
Q Consensus 370 ~~~~~~~v~LvIvG-G~~~e~Y~~~L~~-la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA 447 (774)
++|+|+| ++..+. ... .+.+++..+ +|.++|+.+++.++|+.||++++||..| |+|++++|||+
T Consensus 220 -------~~l~i~G~~~~~~~----~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~i~ps~~e--~~~~~~~Ea~~ 285 (359)
T cd03808 220 -------VRLLLVGDGDEENP----AAILEIEKLGLEG-RVEFLGFRDDVPELLAAADVFVLPSYRE--GLPRVLLEAMA 285 (359)
T ss_pred -------eEEEEEcCCCcchh----hHHHHHHhcCCcc-eEEEeeccccHHHHHHhccEEEecCccc--CcchHHHHHHH
Confidence 9999999 655422 222 356667777 8999999999999999999999999997 89999999999
Q ss_pred cCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHH
Q 004092 448 FRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYA 522 (774)
Q Consensus 448 ~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~ 522 (774)
||+|||+|+.++..+++.++.+|++++++|+++++++|.+++.+ ++.+.++++++++.+ ++|+++.+++.|.
T Consensus 286 ~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 286 MGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIED---PELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred cCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99999999999999999989999999999999999999999999 999999999999996 7899999998875
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-30 Score=279.28 Aligned_cols=350 Identities=19% Similarity=0.143 Sum_probs=247.6
Q ss_pred eEEEEecCCC-CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhc--CccEE---EcccchhHHHHhhhcCccEE
Q 004092 146 QLALVFPDLL-IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNI--GVPVA---ILQTGREKASFVNWLNYDGI 219 (774)
Q Consensus 146 rialV~~~L~-~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~--gi~i~---~l~~~~~l~~~i~~~~~DII 219 (774)
||++|.+... .||.+.++..+++.|.+.||+|.+++............. ..... .......+...++..+||+|
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 80 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVIVLDNPLDYRRAARAIRLSGPDVV 80 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCCCcccceeeeecCCchhHHHHHHHHhhcCCCEE
Confidence 5788888766 799999999999999999999999987553311111110 01111 11122334556777899999
Q ss_pred EEcCCchh--HHHHHHH--hCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccC-Ccchhhccc
Q 004092 220 LVNSLEAK--VVISNIM--QEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPD-YVLPMMYSA 294 (774)
Q Consensus 220 hvhs~~~~--~~l~~Ll--~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps-~~~~~i~~~ 294 (774)
|+++.... ......+ .....++|+|+++|+...... .. .........+..++.+++++ .........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~--~~------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 152 (366)
T cd03822 81 VIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEP--RP------GDRALLRLLLRRADAVIVMSSELLRALLLR 152 (366)
T ss_pred EEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCcccc--ch------hhhHHHHHHHhcCCEEEEeeHHHHHHHHhh
Confidence 99873210 1111111 112467899999997411100 00 00111233445677777764 222222222
Q ss_pred CCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCC
Q 004092 295 FDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESN 374 (774)
Q Consensus 295 v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~ 374 (774)
....++.++| ++++...+.... . .++.....+.++++++| ++.+. ||++.+++|+..+.+++++
T Consensus 153 ~~~~~~~~i~-~~~~~~~~~~~~----~--~~~~~~~~~~~~i~~~G-~~~~~---K~~~~ll~a~~~~~~~~~~----- 216 (366)
T cd03822 153 AYPEKIAVIP-HGVPDPPAEPPE----S--LKALGGLDGRPVLLTFG-LLRPY---KGLELLLEALPLLVAKHPD----- 216 (366)
T ss_pred cCCCcEEEeC-CCCcCcccCCch----h--hHhhcCCCCCeEEEEEe-eccCC---CCHHHHHHHHHHHHhhCCC-----
Confidence 2246889998 466653222111 1 13444566778999999 88888 9999999999999988777
Q ss_pred CCeEEEEEe-CCCCCc-hHHHHHHHHHHcCCCCccEEEccC-c--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcC
Q 004092 375 SPIKVMILS-GDSTSN-YSVVIEAIAHNLHYPLGVVKHMAA-E--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFR 449 (774)
Q Consensus 375 ~~v~LvIvG-G~~~e~-Y~~~L~~la~~lgL~~~~V~flG~-~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G 449 (774)
++|+|+| +..... ......++++++++.+ +|.|+|. + +++..+|+.||++++||..|.+|+|++++|||+||
T Consensus 217 --~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~-~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G 293 (366)
T cd03822 217 --VRLLVAGETHPDLERYRGEAYALAERLGLAD-RVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFG 293 (366)
T ss_pred --eEEEEeccCccchhhhhhhhHhHHHhcCCCC-cEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcC
Confidence 9999999 543311 1111113478889988 9999986 4 78999999999999999988667999999999999
Q ss_pred CCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004092 450 KPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLE 526 (774)
Q Consensus 450 ~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e 526 (774)
+|||+++.++ .+.+.++.+|++++++|+++++++|..++++ ++.+.+|++++++.+++|+|++++++|.++|+
T Consensus 294 ~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 294 KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLAD---PELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcC---hHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 9999999999 7777777889999999999999999999999 99999999999999977999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-30 Score=292.47 Aligned_cols=337 Identities=15% Similarity=0.152 Sum_probs=222.4
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchh--hhhhc--------------Ccc------EEEcc
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHE--VWRNI--------------GVP------VAILQ 202 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~--~~~~~--------------gi~------i~~l~ 202 (774)
+||++|...+..||+|+.+.+|++.|.++||+|.++......... ..+.. ++. ...+.
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFG 80 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecccHHHHHHHHHHHhcchhhcc
Confidence 589999999999999999999999999999999998875422111 00000 000 01112
Q ss_pred cchhHHHHh-hhcCccEEEEcCCchhH--H--HHH---HHhCCCCCCCEEEEEcCchhhh----------hHH-H-----
Q 004092 203 TGREKASFV-NWLNYDGILVNSLEAKV--V--ISN---IMQEPFKSLPLVWTIHEGTLAT----------RAR-N----- 258 (774)
Q Consensus 203 ~~~~l~~~i-~~~~~DIIhvhs~~~~~--~--l~~---Ll~~~~~~ipvI~tiHg~~l~~----------~~~-k----- 258 (774)
......+++ +..+|||||+|...... + +.. ++.....++|+|||.|+...+. ... .
T Consensus 81 ~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp 160 (405)
T PRK10125 81 NFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP 160 (405)
T ss_pred hHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCC
Confidence 223334445 56799999999876521 1 111 1112345789999999832110 000 0
Q ss_pred ----h---hhhhhhHHHHHHHH----HHHhccEEEccCCcchhh-cccCCCCCEEEeCCCCCCcccccccCchhhHHHHH
Q 004092 259 ----Y---ASSGQLELLNDWKK----VFNRATVVVFPDYVLPMM-YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRV 326 (774)
Q Consensus 259 ----~---~~~~~~~li~~~~~----~~~~a~~vv~ps~~~~~i-~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~ 326 (774)
+ ....+.......+. .......++.++..+... ...+...++.+|| +|+|...+.+.....
T Consensus 161 ~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~~~i~vI~-NGid~~~~~~~~~~~------ 233 (405)
T PRK10125 161 TLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIIN-NGIDMATEAILAELP------ 233 (405)
T ss_pred CccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCCCCEEEeC-CCcCccccccccccc------
Confidence 1 00111122222222 222334566676663322 2233457899999 488863222221110
Q ss_pred HhCCCCCCEEEEEEeccc-ccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCC
Q 004092 327 KMGFKPDDLVIAIVGTQF-MYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYP 404 (774)
Q Consensus 327 ~lgl~~~~~vIl~vGsrl-~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~ 404 (774)
....++++++++++|+.+ .++ ||++.+++|+..+. ++ ++|+|+| |+... .
T Consensus 234 ~~~~~~~~~~il~v~~~~~~~~---Kg~~~li~A~~~l~---~~-------~~L~ivG~g~~~~---------------~ 285 (405)
T PRK10125 234 PVRETQGKPKIAVVAHDLRYDG---KTDQQLVREMMALG---DK-------IELHTFGKFSPFT---------------A 285 (405)
T ss_pred ccccCCCCCEEEEEEeccccCC---ccHHHHHHHHHhCC---CC-------eEEEEEcCCCccc---------------c
Confidence 001234567899999424 345 89999999999874 34 8999999 65321 1
Q ss_pred CccEEEccCc---ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHH
Q 004092 405 LGVVKHMAAE---GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKAL 481 (774)
Q Consensus 405 ~~~V~flG~~---~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~L 481 (774)
. .|.++|+. .++.++|++||+||+||..| |||++++||||||+|||+|++||++|++.++ +|++++++|+++|
T Consensus 286 ~-~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~E--gfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~~L 361 (405)
T PRK10125 286 G-NVVNHGFETDKRKLMSALNQMDALVFSSRVD--NYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVLQL 361 (405)
T ss_pred c-ceEEecCcCCHHHHHHHHHhCCEEEECCccc--cCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHHHH
Confidence 2 58888864 67899999999999999988 8999999999999999999999999999775 8999999999999
Q ss_pred HHHHHHHHHcCCCcHHHHH----HHHHHHHHH-HhcCHHHHHHHHHHHHHHH
Q 004092 482 THIILQVITNGKISPFARN----IASIGRRSV-KNLMALETIEGYAMLLENV 528 (774)
Q Consensus 482 a~aI~~Ll~d~~~~~~r~~----m~~~ar~~a-k~fs~~~~a~~y~~L~e~l 528 (774)
|+++ + +..+++ +..++++.+ ++|+++.++++|.++|+++
T Consensus 362 a~~~-----~---~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 362 AQLS-----K---PEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred Hhcc-----C---HHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9864 3 333332 235577777 6799999999999999863
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-30 Score=294.66 Aligned_cols=357 Identities=18% Similarity=0.178 Sum_probs=247.8
Q ss_pred eEEEEecCC----CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh--------------------------hhcC
Q 004092 146 QLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW--------------------------RNIG 195 (774)
Q Consensus 146 rialV~~~L----~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~--------------------------~~~g 195 (774)
+|++|.+.. ..||...++..|+++|+++||+|.|+++..+...... ...+
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 467777653 4799999999999999999999999997654322110 1123
Q ss_pred ccEEEcccch---------------------------hHHHHhhh--cCccEEEEcCCchhHHHHHHHhCC-----CCCC
Q 004092 196 VPVAILQTGR---------------------------EKASFVNW--LNYDGILVNSLEAKVVISNIMQEP-----FKSL 241 (774)
Q Consensus 196 i~i~~l~~~~---------------------------~l~~~i~~--~~~DIIhvhs~~~~~~l~~Ll~~~-----~~~i 241 (774)
++++.+.... ....++.. .+||+||+|.+.+. .+..++... +.++
T Consensus 81 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~-~~~~~l~~~~~~~~~~~~ 159 (476)
T cd03791 81 VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTG-LVPALLKEKYADPFFKNI 159 (476)
T ss_pred ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHH-HHHHHHHHhhccccCCCC
Confidence 4443332111 01122333 68999999998873 544444332 2578
Q ss_pred CEEEEEcCchhhhh-----HHHhhhh----------hhhHHHHHHHHHHHhccEEEccCCcc-hhhcc-----------c
Q 004092 242 PLVWTIHEGTLATR-----ARNYASS----------GQLELLNDWKKVFNRATVVVFPDYVL-PMMYS-----------A 294 (774)
Q Consensus 242 pvI~tiHg~~l~~~-----~~k~~~~----------~~~~li~~~~~~~~~a~~vv~ps~~~-~~i~~-----------~ 294 (774)
|+|+|+|+...... ....... .....+...+..+..++.+...+... ..+.. .
T Consensus 160 ~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~ 239 (476)
T cd03791 160 KTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLR 239 (476)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHH
Confidence 99999997322110 0000000 00011233344566666655554431 11111 1
Q ss_pred CCCCCEEEeCCCCCCcccccccCch----------------hhHHHHHHhCCC--CCCEEEEEEecccccccccccHHHH
Q 004092 295 FDAGNYYVIPGSPAKAWEADTNMDL----------------YNDTVRVKMGFK--PDDLVIAIVGTQFMYRGLWLEHALI 356 (774)
Q Consensus 295 v~~~ki~vIpg~gvd~~~~~~~~~~----------------~k~~lR~~lgl~--~~~~vIl~vGsrl~~~KgiKg~~lL 356 (774)
....++.+|+| |+|...+.+.... .+..+++++|++ ++.++++++| |+.+. ||++.+
T Consensus 240 ~~~~ki~~I~N-Gid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vG-rl~~~---Kg~~~l 314 (476)
T cd03791 240 ARAGKLSGILN-GIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVG-RLTEQ---KGIDLL 314 (476)
T ss_pred hccCCeEEEeC-CCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEe-ecccc---ccHHHH
Confidence 23468999994 8876544432211 145678899985 7788999999 88888 999999
Q ss_pred HHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEc-cCc-ccHHHHHHHcCEEEEcCcc
Q 004092 357 LRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHM-AAE-GDVDSVLNTADVVIYGSFL 433 (774)
Q Consensus 357 LeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~fl-G~~-~dl~~~l~aaDI~V~PS~~ 433 (774)
++|+..+.++. ++|+|+| |+ ..+.+.++++++++ .+ +|.+. |+. +.+..+|+.||++|+||.+
T Consensus 315 i~a~~~l~~~~---------~~lvi~G~g~--~~~~~~~~~~~~~~--~~-~v~~~~~~~~~~~~~~~~~aDv~l~pS~~ 380 (476)
T cd03791 315 LEALPELLELG---------GQLVILGSGD--PEYEEALRELAARY--PG-RVAVLIGYDEALAHLIYAGADFFLMPSRF 380 (476)
T ss_pred HHHHHHHHHcC---------cEEEEEecCC--HHHHHHHHHHHHhC--CC-cEEEEEeCCHHHHHHHHHhCCEEECCCCC
Confidence 99999987642 8999999 74 34557778888755 44 56654 555 4557899999999999999
Q ss_pred CcCCccHHHHHHHHcCCCEEEcCCcccccccccCc------cEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 004092 434 EEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRV------NGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRR 507 (774)
Q Consensus 434 E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~------~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~ 507 (774)
| +||++++|||+||+|||+++.||+.|+|.++. +|+++++.|+++++++|.++++.-.-++.+.+|++++.+
T Consensus 381 E--~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~ 458 (476)
T cd03791 381 E--PCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA 458 (476)
T ss_pred C--CCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc
Confidence 8 89999999999999999999999999999987 999999999999999999988630005666677776643
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 004092 508 SVKNLMALETIEGYAMLLE 526 (774)
Q Consensus 508 ~ak~fs~~~~a~~y~~L~e 526 (774)
+.|+|+.++++|.++|+
T Consensus 459 --~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 459 --QDFSWDRSAKEYLELYR 475 (476)
T ss_pred --cCCChHHHHHHHHHHHh
Confidence 46999999999999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=298.00 Aligned_cols=284 Identities=16% Similarity=0.186 Sum_probs=224.3
Q ss_pred cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHh---------hhhhhhHHH-HHHHHHHHhccEEEc
Q 004092 214 LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNY---------ASSGQLELL-NDWKKVFNRATVVVF 283 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~---------~~~~~~~li-~~~~~~~~~a~~vv~ 283 (774)
.++|+||+|+....+.+..++. +..++|+|+|.||.....+.... .......++ ...+..+..++.++.
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~-~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~ 250 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAK-ARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITT 250 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHH-HHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEe
Confidence 5899999998754345555443 35689999999983221111111 111111111 223446677887777
Q ss_pred cCCcch--hhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHH
Q 004092 284 PDYVLP--MMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALL 361 (774)
Q Consensus 284 ps~~~~--~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~ 361 (774)
.+.... ....+.+.+++.+||| |+|...+...... ...++.++|+++| ++.+. ||++.+++|++
T Consensus 251 ~s~~~~~~~~~~g~~~~ki~vIpN-gid~~~f~~~~~~---------~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~ 316 (475)
T cd03813 251 LYEGNRERQIEDGADPEKIRVIPN-GIDPERFAPARRA---------RPEKEPPVVGLIG-RVVPI---KDIKTFIRAAA 316 (475)
T ss_pred cCHHHHHHHHHcCCCHHHeEEeCC-CcCHHHcCCcccc---------ccCCCCcEEEEEe-ccccc---cCHHHHHHHHH
Confidence 655522 2334566678999994 8887443332110 2345677999999 88888 99999999999
Q ss_pred HchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccH
Q 004092 362 PLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPE 440 (774)
Q Consensus 362 ~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~ 440 (774)
.+.++.|+ ++++|+| |+..+.|.+.++++++++++.+ +|.|+| .+++.++|+++|++|+||..| |+|+
T Consensus 317 ~l~~~~p~-------~~l~IvG~g~~~~~~~~e~~~li~~l~l~~-~V~f~G-~~~v~~~l~~aDv~vlpS~~E--g~p~ 385 (475)
T cd03813 317 IVRKKIPD-------AEGWVIGPTDEDPEYAEECRELVESLGLED-NVKFTG-FQNVKEYLPKLDVLVLTSISE--GQPL 385 (475)
T ss_pred HHHHhCCC-------eEEEEECCCCcChHHHHHHHHHHHHhCCCC-eEEEcC-CccHHHHHHhCCEEEeCchhh--cCCh
Confidence 99988888 9999999 7767788899999999999998 999999 779999999999999999988 8999
Q ss_pred HHHHHHHcCCCEEEcCCccccccccc------CccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH-hcC
Q 004092 441 ILVKALCFRKPIIAPDLSNIRKYVDD------RVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVK-NLM 513 (774)
Q Consensus 441 ~llEAMA~G~PVIatd~ggi~EiV~d------g~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak-~fs 513 (774)
+++||||||+|||+|+.|+++|++.+ |.+|+++++.|+++++++|.++++| ++.+++|+++|++.++ .|+
T Consensus 386 ~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~---~~~~~~~~~~a~~~v~~~~s 462 (475)
T cd03813 386 VILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKD---PELRRAMGEAGRKRVERYYT 462 (475)
T ss_pred HHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999988 6789999999999999999999999 9999999999999994 589
Q ss_pred HHHHHHHHHHHHH
Q 004092 514 ALETIEGYAMLLE 526 (774)
Q Consensus 514 ~~~~a~~y~~L~e 526 (774)
|+.++++|.++|+
T Consensus 463 ~~~~~~~y~~lY~ 475 (475)
T cd03813 463 LERMIDSYRRLYL 475 (475)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=273.73 Aligned_cols=352 Identities=18% Similarity=0.219 Sum_probs=252.9
Q ss_pred eEEEEecCC--CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEE------------cccchhHHHHh
Q 004092 146 QLALVFPDL--LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAI------------LQTGREKASFV 211 (774)
Q Consensus 146 rialV~~~L--~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~------------l~~~~~l~~~i 211 (774)
||+++.... ..||.+..+..+++.|.+.||+|++++..............+.... ......+...+
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRALIIIL 80 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccccccccccccccchhhhhhccccHHHHHHHHH
Confidence 466776655 4589999999999999999999999998654322111111111100 11112233346
Q ss_pred hhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhH-HHhhhhhhhHHH--HHHHHHHHhccEEEccCCcc
Q 004092 212 NWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRA-RNYASSGQLELL--NDWKKVFNRATVVVFPDYVL 288 (774)
Q Consensus 212 ~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~-~k~~~~~~~~li--~~~~~~~~~a~~vv~ps~~~ 288 (774)
+..+||+||++++........... +..++|+|+++|+....+.. ............ ...+..+..++.+.+++...
T Consensus 81 ~~~~~Div~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~ 159 (374)
T cd03817 81 KELGPDIVHTHTPFSLGLLGLRVA-RKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKI 159 (374)
T ss_pred hhcCCCEEEECCchhhhhHHHHHH-HHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHH
Confidence 678999999998765333333333 35679999999963221100 000000011111 23344566778777776653
Q ss_pred hhhcccC-CCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhc
Q 004092 289 PMMYSAF-DAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEV 367 (774)
Q Consensus 289 ~~i~~~v-~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~ 367 (774)
....... ...++.++| +++|...+. .......++.++..+++++++++| ++.+. ||++.+++|+..+.++.
T Consensus 160 ~~~~~~~~~~~~~~vi~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---k~~~~l~~~~~~~~~~~ 231 (374)
T cd03817 160 ADLLREYGVKRPIEVIP-TGIDLDRFE---PVDGDDERRKLGIPEDEPVLLYVG-RLAKE---KNIDFLIRAFARLLKEE 231 (374)
T ss_pred HHHHHhcCCCCceEEcC-CccchhccC---ccchhHHHHhcCCCCCCeEEEEEe-eeecc---cCHHHHHHHHHHHHHhC
Confidence 3222222 234578888 477763332 222233366677788888999999 77777 99999999999998877
Q ss_pred ccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHH
Q 004092 368 SVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVK 444 (774)
Q Consensus 368 p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llE 444 (774)
++ ++++++| |+.. +.+++.++++++.+ +|.++|++ +++..+|+.||++++||..| ++|++++|
T Consensus 232 ~~-------~~l~i~G~~~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e--~~~~~~~E 297 (374)
T cd03817 232 PD-------VKLVIVGDGPER----EELEELARELGLAD-RVIFTGFVPREELPDYYKAADLFVFASTTE--TQGLVLLE 297 (374)
T ss_pred CC-------eEEEEEeCCchH----HHHHHHHHHcCCCC-cEEEeccCChHHHHHHHHHcCEEEeccccc--CcChHHHH
Confidence 77 9999999 6654 67888888889888 99999987 78999999999999999988 89999999
Q ss_pred HHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004092 445 ALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAML 524 (774)
Q Consensus 445 AMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L 524 (774)
||+||+|||+++.++..+++.++.+|+++++++. +++++|.+++++ ++.+++|++++++.++++. +++++.++
T Consensus 298 a~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 370 (374)
T cd03817 298 AMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQD---PELRRRLSKNAEESAEKFS---FAKKVEKL 370 (374)
T ss_pred HHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 9999999999999999999999999999998877 999999999999 9999999999999997766 55666666
Q ss_pred HHH
Q 004092 525 LEN 527 (774)
Q Consensus 525 ~e~ 527 (774)
|++
T Consensus 371 ~~~ 373 (374)
T cd03817 371 YEE 373 (374)
T ss_pred Hhc
Confidence 654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=283.32 Aligned_cols=335 Identities=14% Similarity=0.125 Sum_probs=233.0
Q ss_pred CeEEEEecCC-CCChHHHHHHHHHHHHHHc--CCeEEEEEcCCCcchhhhhhcC-------ccEEEc---ccchhHHHHh
Q 004092 145 PQLALVFPDL-LIDPQQLQMVTIAIALREI--GYAIQVYSLEDGRAHEVWRNIG-------VPVAIL---QTGREKASFV 211 (774)
Q Consensus 145 ~rialV~~~L-~~GG~e~~v~~Lak~L~~~--G~eV~V~t~~~~~~~~~~~~~g-------i~i~~l---~~~~~l~~~i 211 (774)
+||+++.+.+ ..||+|+++.++++.|.+. ||++.+++.............+ +.+..+ .....+.+.+
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 80 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKAWLKEIKYAQSFSNIKLSFLRRAKHVYNFSKWL 80 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChHHHHhcchhcccccchhhhhcccHHHHHHHHHH
Confidence 4788888876 4699999999999999999 8999988875543222222222 111111 1123355667
Q ss_pred hhcCccEEEEcCCchhHHHHHHHhCC-CCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc--
Q 004092 212 NWLNYDGILVNSLEAKVVISNIMQEP-FKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL-- 288 (774)
Q Consensus 212 ~~~~~DIIhvhs~~~~~~l~~Ll~~~-~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~-- 288 (774)
+..+||+||+|++... .+..++... ....+++.+.|........ + . ...+..++.+...+...
T Consensus 81 ~~~~~Dii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~~~~~~--~------~-----~~~~~~~d~~i~~S~~~~~ 146 (359)
T PRK09922 81 KETQPDIVICIDVISC-LYANKARKKSGKQFKIFSWPHFSLDHKKH--A------E-----CKKITCADYHLAISSGIKE 146 (359)
T ss_pred HhcCCCEEEEcCHHHH-HHHHHHHHHhCCCCeEEEEecCcccccch--h------h-----hhhhhcCCEEEEcCHHHHH
Confidence 7889999999987653 443433221 2224566677742111000 0 0 01123455555554442
Q ss_pred hhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcc
Q 004092 289 PMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVS 368 (774)
Q Consensus 289 ~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p 368 (774)
.+...+++.+++.+||+ |+|...+.. .. ....++++++++| ++.. ++.||++.+++|+..+..
T Consensus 147 ~~~~~~~~~~ki~vi~N-~id~~~~~~--~~---------~~~~~~~~i~~~G-rl~~-~~~k~~~~l~~a~~~~~~--- 209 (359)
T PRK09922 147 QMMARGISAQRISVIYN-PVEIKTIII--PP---------PERDKPAVFLYVG-RLKF-EGQKNVKELFDGLSQTTG--- 209 (359)
T ss_pred HHHHcCCCHHHEEEEcC-CCCHHHccC--CC---------cccCCCcEEEEEE-EEec-ccCcCHHHHHHHHHhhCC---
Confidence 22233455678899984 777522111 10 0123467899999 7653 235999999999988743
Q ss_pred cCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcc----cHHHHHHHcCEEEEcCccCcCCccHHHH
Q 004092 369 VENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEG----DVDSVLNTADVVIYGSFLEEQTFPEILV 443 (774)
Q Consensus 369 ~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~----dl~~~l~aaDI~V~PS~~E~qGfp~~ll 443 (774)
+ ++|+|+| |+.. +.+++.++++++++ +|.|+|+++ ++.++|+.||++|+||.+| |||++++
T Consensus 210 ~-------~~l~ivG~g~~~----~~l~~~~~~~~l~~-~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~E--gf~~~~l 275 (359)
T PRK09922 210 E-------WQLHIIGDGSDF----EKCKAYSRELGIEQ-RIIWHGWQSQPWEVVQQKIKNVSALLLTSKFE--GFPMTLL 275 (359)
T ss_pred C-------eEEEEEeCCccH----HHHHHHHHHcCCCC-eEEEecccCCcHHHHHHHHhcCcEEEECCccc--CcChHHH
Confidence 4 8999999 8765 77889999999998 999999763 5677888899999999998 8999999
Q ss_pred HHHHcCCCEEEcC-CcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 004092 444 KALCFRKPIIAPD-LSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYA 522 (774)
Q Consensus 444 EAMA~G~PVIatd-~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~ 522 (774)
||||||+|||+|+ .+|..|+|.++.+|++++++|+++++++|.+++++ ++.+. ..+..+.+++|+.+...+++.
T Consensus 276 EAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~ 350 (359)
T PRK09922 276 EAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISG---EVKYQ--HDAIPNSIERFYEVLYFKNLN 350 (359)
T ss_pred HHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhC---cccCC--HHHHHHHHHHhhHHHHHHHHH
Confidence 9999999999999 89999999999999999999999999999999999 76431 122233346677777888888
Q ss_pred HHHHHHh
Q 004092 523 MLLENVL 529 (774)
Q Consensus 523 ~L~e~ll 529 (774)
.+|+++.
T Consensus 351 ~~~~~~~ 357 (359)
T PRK09922 351 NALFSKL 357 (359)
T ss_pred HHHHHHh
Confidence 8877754
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-30 Score=300.29 Aligned_cols=292 Identities=11% Similarity=0.076 Sum_probs=209.2
Q ss_pred cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCch--------h-------hhh------HHHhhhhhhhHHHHHHH
Q 004092 214 LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGT--------L-------ATR------ARNYASSGQLELLNDWK 272 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~--------l-------~~~------~~k~~~~~~~~li~~~~ 272 (774)
..||+||.|.+.++ +++.+++. ..++|.|.|.|.-. . .++ .+......++.+++...
T Consensus 407 ~~PDlIHaHYwdsg-~vA~~La~-~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~ 484 (815)
T PLN00142 407 GKPDLIIGNYSDGN-LVASLLAH-KLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTY 484 (815)
T ss_pred CCCCEEEECCccHH-HHHHHHHH-HhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcH
Confidence 35999999999884 77777654 67899999999410 0 000 12222222333332221
Q ss_pred HHHHhc-cEE-EccCC---c---chhhcccCC--CCCEEEeCCCCCCcccccccCchh-h---------------HHHHH
Q 004092 273 KVFNRA-TVV-VFPDY---V---LPMMYSAFD--AGNYYVIPGSPAKAWEADTNMDLY-N---------------DTVRV 326 (774)
Q Consensus 273 ~~~~~a-~~v-v~ps~---~---~~~i~~~v~--~~ki~vIpg~gvd~~~~~~~~~~~-k---------------~~lR~ 326 (774)
...... +.+ .+-++ . +..+.++++ ..++.+|| +|+|...|.++.... + ...++
T Consensus 485 qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVp-pGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e 563 (815)
T PLN00142 485 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS-PGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDE 563 (815)
T ss_pred HHHhcccchhhhhhcccccccchhhhhhccccccccCeeEEC-CCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHH
Confidence 111000 000 00010 0 122233443 45888998 588886665544321 1 11234
Q ss_pred HhCC--CCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCC--Cc------hHHHHH
Q 004092 327 KMGF--KPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDST--SN------YSVVIE 395 (774)
Q Consensus 327 ~lgl--~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~--e~------Y~~~L~ 395 (774)
.+|+ ++++++|+++| |+.+. ||++.+++|++.+.+..++ ++|+|+| |... .. +...+.
T Consensus 564 ~lg~l~~~~kpvIl~VG-RL~~~---KGid~LIeA~a~l~~l~~~-------~~LVIVGgg~d~~~s~d~ee~~el~~L~ 632 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMA-RLDRV---KNLTGLVEWYGKNKRLREL-------VNLVVVGGFIDPSKSKDREEIAEIKKMH 632 (815)
T ss_pred HhCCccCCCCcEEEEEe-cCccc---CCHHHHHHHHHHHHHhCCC-------cEEEEEECCccccccccHHHHHHHHHHH
Confidence 5665 45667999999 99998 9999999999988766666 9999999 4211 11 124577
Q ss_pred HHHHHcCCCCccEEEccCc------ccHHHHHH-HcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCc
Q 004092 396 AIAHNLHYPLGVVKHMAAE------GDVDSVLN-TADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRV 468 (774)
Q Consensus 396 ~la~~lgL~~~~V~flG~~------~dl~~~l~-aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~ 468 (774)
++++++++.+ +|.|+|.. +++..+++ ++|+||+||.+| |||++++||||||+|||+|+.||+.|+|.||+
T Consensus 633 ~La~~lgL~~-~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~E--gFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~ 709 (815)
T PLN00142 633 SLIEKYNLKG-QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCQGGPAEIIVDGV 709 (815)
T ss_pred HHHHHcCCCC-cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCccc--CCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCC
Confidence 8899999998 99999853 34666666 479999999999 89999999999999999999999999999999
Q ss_pred cEEEEcCCCHHHHHHHHHHHH----HcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 004092 469 NGYLFPKENIKALTHIILQVI----TNGKISPFARNIASIGRRSV-KNLMALETIEGYAMLL 525 (774)
Q Consensus 469 ~G~Lv~~~d~e~La~aI~~Ll----~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~ 525 (774)
+|+++++.|+++++++|..++ .| ++.+++|+++|++.+ ++|+|+.+++++.++.
T Consensus 710 tG~LV~P~D~eaLA~aI~~lLekLl~D---p~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 710 SGFHIDPYHGDEAANKIADFFEKCKED---PSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred cEEEeCCCCHHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999997654 68 899999999999999 6799999999999977
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=275.85 Aligned_cols=336 Identities=16% Similarity=0.154 Sum_probs=240.8
Q ss_pred eEEEEecCCC--CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEccc---------chhHHHH--hh
Q 004092 146 QLALVFPDLL--IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQT---------GREKASF--VN 212 (774)
Q Consensus 146 rialV~~~L~--~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~---------~~~l~~~--i~ 212 (774)
||++|.+... .||.++++..+++.|.++||+|+|++.............++++..+.. ...+... +.
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDEERNGHRVIRAPSLLNVASTPFSPSFFKQLKKL 80 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhhhccCceEEEeecccccccccccHHHHHHHHhc
Confidence 4677776654 699999999999999999999999998764433222222222222211 1111111 34
Q ss_pred hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhh-
Q 004092 213 WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMM- 291 (774)
Q Consensus 213 ~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i- 291 (774)
..++|+||+|++........... ..++|+++++|+...... ..... .-......+..++.+.+.+......
T Consensus 81 ~~~~Dii~~~~~~~~~~~~~~~~--~~~~~~i~~~h~~~~~~~---~~~~~---~~~~~~~~~~~~d~vi~~s~~~~~~~ 152 (357)
T cd03795 81 AKKADVIHLHFPNPLADLALLLL--PRKKPVVVHWHSDIVKQK---LLLKL---YRPLQRRFLRRADAIVATSPNYAETS 152 (357)
T ss_pred CCCCCEEEEecCcchHHHHHHHh--ccCceEEEEEcChhhccc---hhhhh---hhHHHHHHHHhcCEEEeCcHHHHHHH
Confidence 67899999998776433333332 256899999996432211 00000 0111223556677776665553221
Q ss_pred --cccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhccc
Q 004092 292 --YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSV 369 (774)
Q Consensus 292 --~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~ 369 (774)
.... ..++.++|+ |+|...+...... . ........+.++++++| ++.+. ||++.+++|++++. +
T Consensus 153 ~~~~~~-~~~~~~i~~-gi~~~~~~~~~~~-~---~~~~~~~~~~~~i~~~G-~~~~~---K~~~~li~a~~~l~----~ 218 (357)
T cd03795 153 PVLRRF-RDKVRVIPL-GLDPARYPRPDAL-E---EAIWRRAAGRPFFLFVG-RLVYY---KGLDVLLEAAAALP----D 218 (357)
T ss_pred HHhcCC-ccceEEecC-CCChhhcCCcchh-h---hHhhcCCCCCcEEEEec-ccccc---cCHHHHHHHHHhcc----C
Confidence 1122 267888884 7776332221110 1 12234556778999999 78887 99999999999987 4
Q ss_pred CCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHH
Q 004092 370 ENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKAL 446 (774)
Q Consensus 370 ~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAM 446 (774)
++++|+| |+.. +.+++.++++++.+ +|.|+|++ +++..+|+.||++++||....+|+|++++|||
T Consensus 219 -------~~l~i~G~g~~~----~~~~~~~~~~~~~~-~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~ 286 (357)
T cd03795 219 -------APLVIVGEGPLE----AELEALAAALGLLD-RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAM 286 (357)
T ss_pred -------cEEEEEeCChhH----HHHHHHHHhcCCcc-eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHH
Confidence 8999999 7654 67788888889988 99999987 56899999999999999642228999999999
Q ss_pred HcCCCEEEcCCccccccccc-CccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHH
Q 004092 447 CFRKPIIAPDLSNIRKYVDD-RVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETI 518 (774)
Q Consensus 447 A~G~PVIatd~ggi~EiV~d-g~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a 518 (774)
+||+|||+|+.++..+.+.+ +.+|++++++|+++++++|.++++| ++.+++|+++|++.+ ++|++++++
T Consensus 287 ~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 287 AFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED---PELRERLGEAARERAEEEFTADRMV 357 (357)
T ss_pred HcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHhcchHhhC
Confidence 99999999999999998886 8899999999999999999999999 999999999999999 679998864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=275.02 Aligned_cols=340 Identities=13% Similarity=0.128 Sum_probs=234.5
Q ss_pred eEEEEecC---CCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccch---------hHHHHh--
Q 004092 146 QLALVFPD---LLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGR---------EKASFV-- 211 (774)
Q Consensus 146 rialV~~~---L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~---------~l~~~i-- 211 (774)
||++|... -..||+++++.++++.|.++||+|+|++.............++++..++... .+....
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQKETEYNGVRLIHIPAPEIGGLGTIIYDILAILHA 80 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCcccccCCceEEEcCCCCccchhhhHHHHHHHHHH
Confidence 46777553 2579999999999999999999999999865433222233455554443321 011111
Q ss_pred --hhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHH-HHHHHHhccEEEccCCcc
Q 004092 212 --NWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLND-WKKVFNRATVVVFPDYVL 288 (774)
Q Consensus 212 --~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~-~~~~~~~a~~vv~ps~~~ 288 (774)
...++|+||...+... ....++ . ..++|+++++|+..... ..+. .....+... ....+..++.+.+.+...
T Consensus 81 ~~~~~~~~~i~~~~~~~~-~~~~~~-~-~~~~~~v~~~h~~~~~~--~~~~-~~~~~~~~~~~~~~~~~ad~ii~~s~~~ 154 (363)
T cd04955 81 LFVKRDIDHVHALGPAIA-PFLPLL-R-LKGKKVVVNMDGLEWKR--AKWG-RPAKRYLKFGEKLAVKFADRLIADSPGI 154 (363)
T ss_pred HhccCCeEEEEecCccHH-HHHHHH-H-hcCCCEEEEccCcceee--cccc-cchhHHHHHHHHHHHhhccEEEeCCHHH
Confidence 1344555555444431 222223 2 34789999999743221 0010 011111111 223455677777766653
Q ss_pred hhhc-ccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhc
Q 004092 289 PMMY-SAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEV 367 (774)
Q Consensus 289 ~~i~-~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~ 367 (774)
.... ..+.... .+||+ |+|...+.. ....+.++++.++. .++++| ++.+. ||++.+++|++.+..
T Consensus 155 ~~~~~~~~~~~~-~~i~n-gv~~~~~~~-----~~~~~~~~~~~~~~-~i~~~G-~~~~~---Kg~~~li~a~~~l~~-- 220 (363)
T cd04955 155 KEYLKEKYGRDS-TYIPY-GADHVVSSE-----EDEILKKYGLEPGR-YYLLVG-RIVPE---NNIDDLIEAFSKSNS-- 220 (363)
T ss_pred HHHHHHhcCCCC-eeeCC-CcChhhcch-----hhhhHHhcCCCCCc-EEEEEe-ccccc---CCHHHHHHHHHhhcc--
Confidence 3222 2233233 77884 777632221 12334456666554 678999 88888 999999999998864
Q ss_pred ccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCcc-CcCCccHHHH
Q 004092 368 SVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFL-EEQTFPEILV 443 (774)
Q Consensus 368 p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~-E~qGfp~~ll 443 (774)
+ ++|+|+| |+....|.+.++ +.+++.+ +|+|+|++ +++..+|..||++++||.. | |||++++
T Consensus 221 -~-------~~l~ivG~~~~~~~~~~~~~---~~~~~~~-~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e--~~~~~~~ 286 (363)
T cd04955 221 -G-------KKLVIVGNADHNTPYGKLLK---EKAAADP-RIIFVGPIYDQELLELLRYAALFYLHGHSVG--GTNPSLL 286 (363)
T ss_pred -C-------ceEEEEcCCCCcchHHHHHH---HHhCCCC-cEEEccccChHHHHHHHHhCCEEEeCCccCC--CCChHHH
Confidence 4 8999999 766544443322 2567777 89999987 6788999999999999988 6 8999999
Q ss_pred HHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH-hcCHHHHHHHHH
Q 004092 444 KALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVK-NLMALETIEGYA 522 (774)
Q Consensus 444 EAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak-~fs~~~~a~~y~ 522 (774)
|||+||+|||+|+.++..|++.+ +|.+++++|. ++++|.+++++ ++.+.++++++++.++ +|+|+.++++|.
T Consensus 287 EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~fs~~~~~~~~~ 359 (363)
T cd04955 287 EAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEAD---PEEVSAMAKAARERIREKYTWEKIADQYE 359 (363)
T ss_pred HHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhC---HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999977 7899987665 99999999999 9999999999999984 699999999999
Q ss_pred HHHH
Q 004092 523 MLLE 526 (774)
Q Consensus 523 ~L~e 526 (774)
++|+
T Consensus 360 ~~y~ 363 (363)
T cd04955 360 ELYK 363 (363)
T ss_pred HHhC
Confidence 9874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=271.77 Aligned_cols=352 Identities=20% Similarity=0.256 Sum_probs=257.3
Q ss_pred eEEEEecCCC--CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEE-------------EcccchhHHHH
Q 004092 146 QLALVFPDLL--IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVA-------------ILQTGREKASF 210 (774)
Q Consensus 146 rialV~~~L~--~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~-------------~l~~~~~l~~~ 210 (774)
||+++.+... .||.+.++..+++.|.+.||+|.+++.................. .......+...
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRL 80 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHHHH
Confidence 4666666553 38999999999999999999999999876442222111111110 00111223445
Q ss_pred hhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchh
Q 004092 211 VNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPM 290 (774)
Q Consensus 211 i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~ 290 (774)
++..++|+||+++........ +. ....++|+|+++|+......... ...............+..++.+.+.+.....
T Consensus 81 ~~~~~~Dii~~~~~~~~~~~~-~~-~~~~~~~~i~~~h~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~ 157 (374)
T cd03801 81 LRRERFDVVHAHDWLALLAAA-LA-ARLLGIPLVLTVHGLEFGRPGNE-LGLLLKLARALERRALRRADRIIAVSEATRE 157 (374)
T ss_pred hhhcCCcEEEEechhHHHHHH-HH-HHhcCCcEEEEeccchhhccccc-hhHHHHHHHHHHHHHHHhCCEEEEecHHHHH
Confidence 666899999999988743322 22 23567999999997433211110 0000011112233355667777766655322
Q ss_pred -hcccCC--CCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhc
Q 004092 291 -MYSAFD--AGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEV 367 (774)
Q Consensus 291 -i~~~v~--~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~ 367 (774)
...... ..++.++|+ |++...+.... ...+.......+.+.++++| ++.+. ||++.+++|+..+.+++
T Consensus 158 ~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~g-~~~~~---k~~~~~i~~~~~~~~~~ 228 (374)
T cd03801 158 ELRELGGVPPEKITVIPN-GVDTERFRPAP----RAARRRLGIPEDEPVILFVG-RLVPR---KGVDLLLEALAKLRKEY 228 (374)
T ss_pred HHHhcCCCCCCcEEEecC-cccccccCccc----hHHHhhcCCcCCCeEEEEec-chhhh---cCHHHHHHHHHHHhhhc
Confidence 222222 257888884 66663322211 22334555667778999999 77777 99999999999999887
Q ss_pred ccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHH
Q 004092 368 SVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVK 444 (774)
Q Consensus 368 p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llE 444 (774)
++ ++|+++| ++.. ..+++.++++++.+ +|.+.|++ +++..+|+.||++++|+..| |+|++++|
T Consensus 229 ~~-------~~l~i~G~~~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~~di~i~~~~~~--~~~~~~~E 294 (374)
T cd03801 229 PD-------VRLVIVGDGPLR----EELEALAAELGLGD-RVTFLGFVPDEDLPALYAAADVFVLPSLYE--GFGLVLLE 294 (374)
T ss_pred CC-------eEEEEEeCcHHH----HHHHHHHHHhCCCc-ceEEEeccChhhHHHHHHhcCEEEecchhc--cccchHHH
Confidence 77 9999999 5443 67778888888988 99999988 89999999999999999997 89999999
Q ss_pred HHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHH
Q 004092 445 ALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAM 523 (774)
Q Consensus 445 AMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~ 523 (774)
||++|+|||+++.++..+++.++.+|+++++.|+++++++|.+++++ ++.+.+|++++++.+ ++|+|+++++.+.+
T Consensus 295 a~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (374)
T cd03801 295 AMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDD---PELRRRLGEAARERVAERFSWDRVAARTEE 371 (374)
T ss_pred HHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcC---hHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999999999999988999999999999999999999999 999999999999777 78999999999998
Q ss_pred HHH
Q 004092 524 LLE 526 (774)
Q Consensus 524 L~e 526 (774)
+|+
T Consensus 372 ~~~ 374 (374)
T cd03801 372 VYY 374 (374)
T ss_pred hhC
Confidence 873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=276.81 Aligned_cols=331 Identities=19% Similarity=0.223 Sum_probs=247.2
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh---hhcCccEEE-------cccchhHHHHhhhcC
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW---RNIGVPVAI-------LQTGREKASFVNWLN 215 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~---~~~gi~i~~-------l~~~~~l~~~i~~~~ 215 (774)
||+++++.+..+ .+..+.++++.|.++||+|+|++.......... ......+.. ......+...++..+
T Consensus 1 ki~~~~~~~~~~-~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T cd03799 1 KIAYLVKEFPRL-SETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELARTRYLARSLALLAQALVLARELRRLG 79 (355)
T ss_pred CEEEECCCCCCc-chHHHHHHHHHHHhCCCeEEEEEecCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 578888887555 889999999999999999999998654322110 001101110 011112233345589
Q ss_pred ccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhh-cc-
Q 004092 216 YDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMM-YS- 293 (774)
Q Consensus 216 ~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i-~~- 293 (774)
+|+||+|+......+..+.. +..++|+++++|+......... ...+..+..++.+.+++...... ..
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~vi~~s~~~~~~l~~~ 148 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLAS-RLGGIPYSFTAHGKDIFRSPDA----------IDLDEKLARADFVVAISEYNRQQLIRL 148 (355)
T ss_pred CCEEEECCCCchHHHHHHHH-HhcCCCEEEEEecccccccCch----------HHHHHHHhhCCEEEECCHHHHHHHHHh
Confidence 99999998765334444443 3457899999997433211100 12333455677776666553222 22
Q ss_pred -cCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCC
Q 004092 294 -AFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENE 372 (774)
Q Consensus 294 -~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~ 372 (774)
+....++.++|+ ++|...+.... .....+.+.++++| ++.+. ||++.+++|+..+.++.++
T Consensus 149 ~~~~~~~~~vi~~-~~d~~~~~~~~----------~~~~~~~~~i~~~g-~~~~~---k~~~~l~~~~~~l~~~~~~--- 210 (355)
T cd03799 149 LGCDPDKIHVVHC-GVDLERFPPRP----------PPPPGEPLRILSVG-RLVEK---KGLDYLLEALALLKDRGID--- 210 (355)
T ss_pred cCCCcccEEEEeC-CcCHHHcCCcc----------ccccCCCeEEEEEe-eeccc---cCHHHHHHHHHHHhhcCCC---
Confidence 355678899984 77753222111 12345567899999 78887 9999999999999887777
Q ss_pred CCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCcc------CcCCccHHHH
Q 004092 373 SNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFL------EEQTFPEILV 443 (774)
Q Consensus 373 ~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~------E~qGfp~~ll 443 (774)
++++++| |+.. +.+++.++++++.+ +|.+.|++ +++..+|+.||++++||.. | |+|++++
T Consensus 211 ----~~l~i~G~~~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e--~~~~~~~ 279 (355)
T cd03799 211 ----FRLDIVGDGPLR----DELEALIAELGLED-RVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDRE--GLPVVLM 279 (355)
T ss_pred ----eEEEEEECCccH----HHHHHHHHHcCCCC-eEEECCcCChHHHHHHHHhCCEEEecceecCCCCcc--CccHHHH
Confidence 9999999 7765 67788889889888 89999987 7899999999999999988 7 8999999
Q ss_pred HHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHH
Q 004092 444 KALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEG 520 (774)
Q Consensus 444 EAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~ 520 (774)
|||+||+|||+++.++.++++.++.+|++++++|+++++++|.+++++ ++.+.+|+++|++.+ ++|+|+.++++
T Consensus 280 Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~---~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 280 EAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDD---PELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 999999999999999999999999899999999999999999999999 999999999999999 67999998764
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=289.20 Aligned_cols=361 Identities=14% Similarity=0.132 Sum_probs=255.1
Q ss_pred CCCeEEEEecCC----CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh---h------hh----------------
Q 004092 143 RKPQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV---W------RN---------------- 193 (774)
Q Consensus 143 rk~rialV~~~L----~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~---~------~~---------------- 193 (774)
|.++|++|.... ..||..-++..|.++|+++||+|.|+.+..+..... . ..
T Consensus 4 ~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (489)
T PRK14098 4 RNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKV 83 (489)
T ss_pred CCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEE
Confidence 348899988865 479999999999999999999999999854322110 0 00
Q ss_pred -----cCccEEEcc---------cc----------hh----------HHHHhhh--cCccEEEEcCCchhHHHHHHHhCC
Q 004092 194 -----IGVPVAILQ---------TG----------RE----------KASFVNW--LNYDGILVNSLEAKVVISNIMQEP 237 (774)
Q Consensus 194 -----~gi~i~~l~---------~~----------~~----------l~~~i~~--~~~DIIhvhs~~~~~~l~~Ll~~~ 237 (774)
.+++++.+. .+ .. ....+.. .+|||||+|.+.++ .+..++...
T Consensus 84 ~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~-l~~~~l~~~ 162 (489)
T PRK14098 84 TALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAG-LVPLLLKTV 162 (489)
T ss_pred ecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHH-HHHHHHHHH
Confidence 012222111 00 00 0111222 47999999998773 555544321
Q ss_pred ------CCCCCEEEEEcCchhhh--hHHHhhh----hhh------hHHHHHHHHHHHhccEEEccCCcch-hhcc-----
Q 004092 238 ------FKSLPLVWTIHEGTLAT--RARNYAS----SGQ------LELLNDWKKVFNRATVVVFPDYVLP-MMYS----- 293 (774)
Q Consensus 238 ------~~~ipvI~tiHg~~l~~--~~~k~~~----~~~------~~li~~~~~~~~~a~~vv~ps~~~~-~i~~----- 293 (774)
+.++|+|+|+|+...+. ....+.. ... ...+...+..+..++.++..+.... .+..
T Consensus 163 ~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~ 242 (489)
T PRK14098 163 YADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEA 242 (489)
T ss_pred hhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCC
Confidence 34799999999732110 0000000 000 0112334446677777766655522 1111
Q ss_pred -cCC------CCCEEEeCCCCCCcccccccCch----------------hhHHHHHHhCCCC--CCEEEEEEeccccccc
Q 004092 294 -AFD------AGNYYVIPGSPAKAWEADTNMDL----------------YNDTVRVKMGFKP--DDLVIAIVGTQFMYRG 348 (774)
Q Consensus 294 -~v~------~~ki~vIpg~gvd~~~~~~~~~~----------------~k~~lR~~lgl~~--~~~vIl~vGsrl~~~K 348 (774)
+++ ..++.+|+| |+|...+.+.... .+..+++++|++. +.++++++| |+.++
T Consensus 243 ~gl~~~l~~~~~kl~~I~N-GID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vg-Rl~~~- 319 (489)
T PRK14098 243 FGLDKVLEERKMRLHGILN-GIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVII-NFDDF- 319 (489)
T ss_pred cChHHHHHhcCCCeeEEeC-CccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEec-ccccc-
Confidence 222 568999994 8887655433211 1456778889873 567999999 99998
Q ss_pred ccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcC
Q 004092 349 LWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTAD 425 (774)
Q Consensus 349 giKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaD 425 (774)
||++++++|+..+.+. + ++|+|+| |+. .|.+.++++++++ ++ +|.|+|.. +++..+|++||
T Consensus 320 --KG~d~li~a~~~l~~~--~-------~~lvivG~G~~--~~~~~l~~l~~~~--~~-~V~~~g~~~~~~~~~~~a~aD 383 (489)
T PRK14098 320 --QGAELLAESLEKLVEL--D-------IQLVICGSGDK--EYEKRFQDFAEEH--PE-QVSVQTEFTDAFFHLAIAGLD 383 (489)
T ss_pred --CcHHHHHHHHHHHHhc--C-------cEEEEEeCCCH--HHHHHHHHHHHHC--CC-CEEEEEecCHHHHHHHHHhCC
Confidence 9999999999998753 4 8999999 753 3568899999865 45 79999965 45789999999
Q ss_pred EEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccccccc----CccEEEEcCCCHHHHHHHHHHHH---HcCCCcHHH
Q 004092 426 VVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDD----RVNGYLFPKENIKALTHIILQVI---TNGKISPFA 498 (774)
Q Consensus 426 I~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~d----g~~G~Lv~~~d~e~La~aI~~Ll---~d~~~~~~r 498 (774)
++|+||..| +||++.+|||+||+|+|++++||+.|++.+ +.+|+++++.|+++|+++|.+++ +| ++.+
T Consensus 384 i~l~PS~~E--~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~---~~~~ 458 (489)
T PRK14098 384 MLLMPGKIE--SCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHD---EERW 458 (489)
T ss_pred EEEeCCCCC--CchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcC---HHHH
Confidence 999999999 899999999999999999999999998864 67899999999999999999865 56 7777
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 499 RNIASIGRRSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 499 ~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
++|++++. .++|+|+.++++|.++|+++++
T Consensus 459 ~~~~~~~~--~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 459 EELVLEAM--ERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred HHHHHHHh--cCCCChHHHHHHHHHHHHHHhc
Confidence 77776553 3679999999999999999864
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=274.11 Aligned_cols=314 Identities=13% Similarity=0.112 Sum_probs=222.0
Q ss_pred CeEEEEecCC------CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCcc----------EEEcccchhHH
Q 004092 145 PQLALVFPDL------LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVP----------VAILQTGREKA 208 (774)
Q Consensus 145 ~rialV~~~L------~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~----------i~~l~~~~~l~ 208 (774)
+||++|.+.+ ..||+++++..+++.|.+.||+|++++................ .........+.
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEALALAE 80 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccceeeccCCCcccccchhhHhhHHHHHHHH
Confidence 4788888876 7899999999999999999999999998664322111111000 00011122344
Q ss_pred HHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc
Q 004092 209 SFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL 288 (774)
Q Consensus 209 ~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~ 288 (774)
..++..+||+||+|+.... .+ . .+..++|+|++.|+........ ........+.++..+...
T Consensus 81 ~~~~~~~~Divh~~~~~~~-~~---~-~~~~~~~~v~~~h~~~~~~~~~-------------~~~~~~~~~~~~~~s~~~ 142 (335)
T cd03802 81 RALAAGDFDIVHNHSLHLP-LP---F-ARPLPVPVVTTLHGPPDPELLK-------------LYYAARPDVPFVSISDAQ 142 (335)
T ss_pred HHHhcCCCCEEEecCcccc-hh---h-hcccCCCEEEEecCCCCcccch-------------HHHhhCcCCeEEEecHHH
Confidence 5567789999999998874 32 2 2356789999999744321111 011112223333333332
Q ss_pred hhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcc
Q 004092 289 PMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVS 368 (774)
Q Consensus 289 ~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p 368 (774)
....... .++.+|| +|+|...+.. .+.++..++++| ++.+. ||++.+++|++..
T Consensus 143 ~~~~~~~--~~~~vi~-ngvd~~~~~~--------------~~~~~~~i~~~G-r~~~~---Kg~~~li~~~~~~----- 196 (335)
T cd03802 143 RRPWPPL--PWVATVH-NGIDLDDYPF--------------RGPKGDYLLFLG-RISPE---KGPHLAIRAARRA----- 196 (335)
T ss_pred Hhhcccc--cccEEec-CCcChhhCCC--------------CCCCCCEEEEEE-eeccc---cCHHHHHHHHHhc-----
Confidence 2211111 6788998 4788743322 123455899999 88888 9999999997653
Q ss_pred cCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcC-CCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHH
Q 004092 369 VENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLH-YPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVK 444 (774)
Q Consensus 369 ~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lg-L~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llE 444 (774)
+ ++|+|+| |+.. +.+.....+.. +.+ +|.|+|++ +++..+|+.+|++|+||...+ |||++++|
T Consensus 197 ~-------~~l~i~G~~~~~----~~~~~~~~~~~~~~~-~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E-~~~~~~lE 263 (335)
T cd03802 197 G-------IPLKLAGPVSDP----DYFYREIAPELLDGP-DIEYLGEVGGAEKAELLGNARALLFPILWEE-PFGLVMIE 263 (335)
T ss_pred C-------CeEEEEeCCCCH----HHHHHHHHHhcccCC-cEEEeCCCCHHHHHHHHHhCcEEEeCCcccC-CcchHHHH
Confidence 3 8999999 7654 33444444333 456 89999987 567899999999999998532 89999999
Q ss_pred HHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHH
Q 004092 445 ALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAM 523 (774)
Q Consensus 445 AMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~ 523 (774)
|||||+|||+++.+|..|++.++.+|+++++ +++++++|.++.+. + .+++++.+ ++|+|+.++++|.+
T Consensus 264 Ama~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~---~------~~~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 264 AMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRL---D------RAACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhcc---H------HHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999999999999999985 99999999998765 3 24556666 67999999999999
Q ss_pred HHH
Q 004092 524 LLE 526 (774)
Q Consensus 524 L~e 526 (774)
+|+
T Consensus 333 ~y~ 335 (335)
T cd03802 333 LYR 335 (335)
T ss_pred HhC
Confidence 884
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=269.99 Aligned_cols=332 Identities=20% Similarity=0.261 Sum_probs=243.8
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCc---c--------EEEcccchhHHHHhhhc
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGV---P--------VAILQTGREKASFVNWL 214 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi---~--------i~~l~~~~~l~~~i~~~ 214 (774)
||+++++.+..||.+..+..++++|.+.||+|.+++............... . .........+...++..
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKE 80 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhc
Confidence 578999999899999999999999999999999999866432211111100 0 11111223455667778
Q ss_pred CccEEEEcCC-chhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchh-hc
Q 004092 215 NYDGILVNSL-EAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPM-MY 292 (774)
Q Consensus 215 ~~DIIhvhs~-~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~-i~ 292 (774)
+||+||+++. .. ..+..+. ... ++|+|+++|+............ . ......+..++.+.+.+..... ..
T Consensus 81 ~~dii~~~~~~~~-~~~~~~~-~~~-~~~~i~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~d~ii~~s~~~~~~~~ 151 (353)
T cd03811 81 KPDVVISHLTTTP-NVLALLA-ARL-GTKLIVWEHNSLSLELKRKLRL----L--LLIRKLYRRADKIVAVSEGVKEDLL 151 (353)
T ss_pred CCCEEEEcCccch-hHHHHHH-hhc-CCceEEEEcCcchhhhccchhH----H--HHHHhhccccceEEEeccchhhhHH
Confidence 9999999998 33 2333333 323 7899999997433211100000 0 2233455667777776665322 22
Q ss_pred ccC--CCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccC
Q 004092 293 SAF--DAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVE 370 (774)
Q Consensus 293 ~~v--~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~ 370 (774)
... ...++.++|+ |++...+...... .. .++...+.++++++| ++.+. ||++.+++|+..+.+++++
T Consensus 152 ~~~~~~~~~~~vi~~-~~~~~~~~~~~~~---~~--~~~~~~~~~~i~~~g-~~~~~---k~~~~~i~~~~~l~~~~~~- 220 (353)
T cd03811 152 KLLGIPPDKIEVIYN-PIDIEEIRALAEE---PL--ELGIPPDGPVILAVG-RLSPQ---KGFDTLIRAFALLRKEGPD- 220 (353)
T ss_pred HhhcCCccccEEecC-CcChhhcCcccch---hh--hcCCCCCceEEEEEe-cchhh---cChHHHHHHHHHhhhcCCC-
Confidence 222 2578889984 7776333222111 00 345667788999999 77787 9999999999999887777
Q ss_pred CCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcC
Q 004092 371 NESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFR 449 (774)
Q Consensus 371 ~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G 449 (774)
++|+++| |+.. +.+++.++++++.+ +|.+.|+.+++.++|+.||++|+||..| |+|++++|||++|
T Consensus 221 ------~~l~i~G~~~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~d~~i~ps~~e--~~~~~~~Ea~~~G 287 (353)
T cd03811 221 ------ARLVILGDGPLR----EELEALAKELGLAD-RVHFLGFQSNPYPYLKAADLFVLSSRYE--GFPNVLLEAMALG 287 (353)
T ss_pred ------ceEEEEcCCccH----HHHHHHHHhcCCCc-cEEEecccCCHHHHHHhCCEEEeCcccC--CCCcHHHHHHHhC
Confidence 9999999 7665 66778889999988 9999999999999999999999999998 8999999999999
Q ss_pred CCEEEcCCcccccccccCccEEEEcCCCHHHH---HHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcC
Q 004092 450 KPIIAPDLSNIRKYVDDRVNGYLFPKENIKAL---THIILQVITNGKISPFARNIASIGRRSV-KNLM 513 (774)
Q Consensus 450 ~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~L---a~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs 513 (774)
+|||+|+.++..|++.++.+|++++++|++++ +++|..+.++ ++.++++++++++.+ ++|+
T Consensus 288 ~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 288 TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD---PELRERLAAAARERVAREYS 352 (353)
T ss_pred CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC---hHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999 6777777778 888888999777666 5564
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=266.87 Aligned_cols=346 Identities=21% Similarity=0.239 Sum_probs=253.7
Q ss_pred EEEecCCC---CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhc---------Ccc----------EEEcccch
Q 004092 148 ALVFPDLL---IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNI---------GVP----------VAILQTGR 205 (774)
Q Consensus 148 alV~~~L~---~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~---------gi~----------i~~l~~~~ 205 (774)
+++.+... .||.+..+..+++.|.+.||+|++++............. ... ........
T Consensus 2 Lii~~~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (377)
T cd03798 2 LVISSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAAR 81 (377)
T ss_pred eEeccCCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHHHH
Confidence 45555444 499999999999999999999999998653322111000 000 00011122
Q ss_pred hHHHHhh--hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEc
Q 004092 206 EKASFVN--WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVF 283 (774)
Q Consensus 206 ~l~~~i~--~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ 283 (774)
.+...+. ..++|+||++.......+...+. ...++|++++.|+.......... ......+..+..++.+.+
T Consensus 82 ~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~~~~~~d~ii~ 154 (377)
T cd03798 82 ALLKLLKLKRFRPDLIHAHFAYPDGFAAALLK-RKLGIPLVVTLHGSDVNLLPRKR------LLRALLRRALRRADAVIA 154 (377)
T ss_pred HHHHHHhcccCCCCEEEEeccchHHHHHHHHH-HhcCCCEEEEeecchhcccCchh------hHHHHHHHHHhcCCeEEe
Confidence 3455566 78999999997766434444443 35668999999974332111100 111223345566777777
Q ss_pred cCCcchhhccc--CCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHH
Q 004092 284 PDYVLPMMYSA--FDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALL 361 (774)
Q Consensus 284 ps~~~~~i~~~--v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~ 361 (774)
.+......... ....++.++|+ ++|...+...... .. ..++...+.+.++++| ++.+. ||++.+++|+.
T Consensus 155 ~s~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~---~~-~~~~~~~~~~~i~~~g-~~~~~---k~~~~li~~~~ 225 (377)
T cd03798 155 VSEALADELKALGIDPEKVTVIPN-GVDTERFSPADRA---EA-RKLGLPEDKKVILFVG-RLVPR---KGIDYLIEALA 225 (377)
T ss_pred CCHHHHHHHHHhcCCCCceEEcCC-CcCcccCCCcchH---HH-HhccCCCCceEEEEec-cCccc---cCHHHHHHHHH
Confidence 66553333222 46678899984 6776333222111 11 3445666788999999 77777 99999999999
Q ss_pred HchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCc
Q 004092 362 PLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTF 438 (774)
Q Consensus 362 ~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGf 438 (774)
.+.+++++ ++++|+| |+.. +.+++.++++++.+ +|.+.|++ +++.++|+.||++++||..| |+
T Consensus 226 ~~~~~~~~-------~~l~i~g~~~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~--~~ 291 (377)
T cd03798 226 RLLKKRPD-------VHLVIVGDGPLR----EALEALAAELGLED-RVTFLGAVPHEEVPAYYAAADVFVLPSLRE--GF 291 (377)
T ss_pred HHHhcCCC-------eEEEEEcCCcch----HHHHHHHHhcCCcc-eEEEeCCCCHHHHHHHHHhcCeeecchhhc--cC
Confidence 99887777 9999999 6655 56778888888888 89999987 67999999999999999997 89
Q ss_pred cHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHH
Q 004092 439 PEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALET 517 (774)
Q Consensus 439 p~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~ 517 (774)
|++++|||+||+|||+++.++..+++.++.+|++++++|+++++++|.+++++ +.. +++.++++.+ ++|+|+.+
T Consensus 292 ~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~---~~~--~~~~~~~~~~~~~~s~~~~ 366 (377)
T cd03798 292 GLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLAD---PWL--RLGRAARRRVAERFSWENV 366 (377)
T ss_pred ChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcC---cHH--HHhHHHHHHHHHHhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999 766 6777777777 77999999
Q ss_pred HHHHHHHHHHH
Q 004092 518 IEGYAMLLENV 528 (774)
Q Consensus 518 a~~y~~L~e~l 528 (774)
++++.++|+++
T Consensus 367 ~~~~~~~~~~l 377 (377)
T cd03798 367 AERLLELYREV 377 (377)
T ss_pred HHHHHHHHhhC
Confidence 99999998763
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-29 Score=270.44 Aligned_cols=326 Identities=20% Similarity=0.204 Sum_probs=229.0
Q ss_pred eEEEEecCC---CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEE----------------------
Q 004092 146 QLALVFPDL---LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAI---------------------- 200 (774)
Q Consensus 146 rialV~~~L---~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~---------------------- 200 (774)
||+++.+.. ..||++.++..++++|.++||+|.+++...................
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDYD 80 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccccceeeccccccccCCCchhhhhHHHhcc
Confidence 466776654 3589999999999999999999999998664322111111111111
Q ss_pred -cccchhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhcc
Q 004092 201 -LQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRAT 279 (774)
Q Consensus 201 -l~~~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~ 279 (774)
......+...++..+||+||++++... ........+..++|+|+++|+............. ..+
T Consensus 81 ~~~~~~~~~~~~~~~~~dii~~~~~~~~-~~~~~~~~~~~~~~~i~~~hd~~~~~~~~~~~~~--------------~~d 145 (359)
T cd03823 81 NPAVVAEFARLLEDFRPDVVHFHHLQGL-GVSILRAARDRGIPIVLTLHDYWLICPRQGLFKK--------------GGD 145 (359)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCccch-HHHHHHHHHhcCCCEEEEEeeeeeecchhhhhcc--------------CCC
Confidence 011223445567789999999987542 2222221234569999999963221111111111 113
Q ss_pred EEEccCCcchhh--cccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHH
Q 004092 280 VVVFPDYVLPMM--YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALIL 357 (774)
Q Consensus 280 ~vv~ps~~~~~i--~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLL 357 (774)
.++..+...... .......++.++| +|+|...+..... +.+.++++++++| ++.+. ||++.++
T Consensus 146 ~ii~~s~~~~~~~~~~~~~~~~~~vi~-n~~~~~~~~~~~~----------~~~~~~~~i~~~G-~~~~~---k~~~~li 210 (359)
T cd03823 146 AVIAPSRFLLDRYVANGLFAEKISVIR-NGIDLDRAKRPRR----------APPGGRLRFGFIG-QLTPH---KGVDLLL 210 (359)
T ss_pred EEEEeCHHHHHHHHHcCCCccceEEec-CCcChhhcccccc----------CCCCCceEEEEEe-cCccc---cCHHHHH
Confidence 333333331111 1122246788888 4777633221110 3456778899999 77777 9999999
Q ss_pred HHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCc-c
Q 004092 358 RALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSF-L 433 (774)
Q Consensus 358 eA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~-~ 433 (774)
+|++.+.+ ++ ++|+++| ++.... ..... +..+ +|.++|+. +++.++|+.||++++||. .
T Consensus 211 ~~~~~l~~--~~-------~~l~i~G~~~~~~~----~~~~~---~~~~-~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 211 EAFKRLPR--GD-------IELVIVGNGLELEE----ESYEL---EGDP-RVEFLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred HHHHHHHh--cC-------cEEEEEcCchhhhH----HHHhh---cCCC-eEEEeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 99999876 55 9999999 654421 11111 5555 89999987 899999999999999997 5
Q ss_pred CcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcC
Q 004092 434 EEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLM 513 (774)
Q Consensus 434 E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs 513 (774)
| |+|++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.++++| ++.+++|++++++..+.
T Consensus 274 e--~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 E--NFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDD---PDLLERLRAGIEPPRSI-- 346 (359)
T ss_pred C--CCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC---hHHHHHHHHhHHHhhhH--
Confidence 6 8999999999999999999999999999999899999999999999999999999 99999999998887754
Q ss_pred HHHHHHHHHHHHH
Q 004092 514 ALETIEGYAMLLE 526 (774)
Q Consensus 514 ~~~~a~~y~~L~e 526 (774)
++++++|.++|+
T Consensus 347 -~~~~~~~~~~~~ 358 (359)
T cd03823 347 -EDQAEEYLKLYR 358 (359)
T ss_pred -HHHHHHHHHHhh
Confidence 889999988885
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-29 Score=270.09 Aligned_cols=351 Identities=16% Similarity=0.132 Sum_probs=248.0
Q ss_pred eEEEEecCCCC--ChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh-------hhcCccEEEcccch-----------
Q 004092 146 QLALVFPDLLI--DPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW-------RNIGVPVAILQTGR----------- 205 (774)
Q Consensus 146 rialV~~~L~~--GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~-------~~~gi~i~~l~~~~----------- 205 (774)
||++|.+...+ ||.+..+..++++|.+.||+|++++.......... ...++.+..+....
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKKNGLLKRLL 80 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCccchHHHHH
Confidence 57788887655 89999999999999999999999997653222111 11233332222110
Q ss_pred -------hHHHHh--hhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhh-hhhh---hHHHHHHH
Q 004092 206 -------EKASFV--NWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYA-SSGQ---LELLNDWK 272 (774)
Q Consensus 206 -------~l~~~i--~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~-~~~~---~~li~~~~ 272 (774)
.....+ +..+||+||++++.....+......+..++|+++++|+........... .... .......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (394)
T cd03794 81 NYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLER 160 (394)
T ss_pred hhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHH
Confidence 011112 3678999999984432233333333355799999999621110000000 0000 11111223
Q ss_pred HHHHhccEEEccCCcchhhc--ccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEeccccccccc
Q 004092 273 KVFNRATVVVFPDYVLPMMY--SAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLW 350 (774)
Q Consensus 273 ~~~~~a~~vv~ps~~~~~i~--~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~Kgi 350 (774)
..+..++.+.+.+....... ......++.++|+ +++...+..... ...+.......+..+++++| ++.+.
T Consensus 161 ~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~G-~~~~~--- 232 (394)
T cd03794 161 LIYRRADAIVVISPGMREYLVRRGVPPEKISVIPN-GVDLELFKPPPA---DESLRKELGLDDKFVVLYAG-NIGRA--- 232 (394)
T ss_pred HHHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCC-CCCHHHcCCccc---hhhhhhccCCCCcEEEEEec-Ccccc---
Confidence 35667777777666633322 4556678899984 666532222211 11134445567778899999 77777
Q ss_pred ccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEE
Q 004092 351 LEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVV 427 (774)
Q Consensus 351 Kg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~ 427 (774)
||++.+++|+..+.+. ++ ++++|+| |+.. +.+++.+...++++ |.++|+. +++.++|+.||++
T Consensus 233 k~~~~l~~~~~~l~~~-~~-------~~l~i~G~~~~~----~~~~~~~~~~~~~~--v~~~g~~~~~~~~~~~~~~di~ 298 (394)
T cd03794 233 QGLDTLLEAAALLKDR-PD-------IRFLIVGDGPEK----EELKELAKALGLDN--VTFLGRVPKEELPELLAAADVG 298 (394)
T ss_pred cCHHHHHHHHHHHhhc-CC-------eEEEEeCCcccH----HHHHHHHHHcCCCc--EEEeCCCChHHHHHHHHhhCee
Confidence 9999999999999876 66 9999999 7665 56667666667754 9999976 7899999999999
Q ss_pred EEcCccCc---CCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 004092 428 IYGSFLEE---QTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASI 504 (774)
Q Consensus 428 V~PS~~E~---qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ 504 (774)
++||..|+ .++|++++|||+||+|||+++.++..+++.++.+|++++++|+++++++|.++++| ++.+++|+++
T Consensus 299 i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~---~~~~~~~~~~ 375 (394)
T cd03794 299 LVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD---PEERAEMGEN 375 (394)
T ss_pred EEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC---hHHHHHHHHH
Confidence 99998872 24599999999999999999999999999988899999999999999999999999 9999999999
Q ss_pred HHHHHH-hcCHHHHHHHH
Q 004092 505 GRRSVK-NLMALETIEGY 521 (774)
Q Consensus 505 ar~~ak-~fs~~~~a~~y 521 (774)
+++.++ +|+|+.++++|
T Consensus 376 ~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 376 GRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHhhcHHHHHHhc
Confidence 999995 89999999876
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-29 Score=272.26 Aligned_cols=343 Identities=13% Similarity=0.095 Sum_probs=244.8
Q ss_pred eEEEEecCCCC---ChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccE------E------EcccchhHHHH
Q 004092 146 QLALVFPDLLI---DPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPV------A------ILQTGREKASF 210 (774)
Q Consensus 146 rialV~~~L~~---GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i------~------~l~~~~~l~~~ 210 (774)
||+++...+.. ||++.++.++++.|.+.|++|++++................. . ...........
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLL 80 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHHH
Confidence 46677777655 999999999999999999999999987643221111110000 0 00000111222
Q ss_pred hhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchh
Q 004092 211 VNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPM 290 (774)
Q Consensus 211 i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~ 290 (774)
....++|+||+++.... .. +..++|+|+++|+.........................+..++.+++.+.....
T Consensus 81 ~~~~~~Dii~~~~~~~~-~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~ 153 (365)
T cd03809 81 LLLLGLDLLHSPHNTAP-LL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKR 153 (365)
T ss_pred hhhcCCCeeeecccccC-cc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHH
Confidence 34478999999998773 22 356799999999732111111111100111122334466677777777655322
Q ss_pred -hc--ccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhc
Q 004092 291 -MY--SAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEV 367 (774)
Q Consensus 291 -i~--~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~ 367 (774)
+. ...+..++.++| ++++...+.. ..... +.......+.++++++| ++.+. ||++.+++|+..+.+..
T Consensus 154 ~~~~~~~~~~~~~~vi~-~~~~~~~~~~---~~~~~-~~~~~~~~~~~~i~~~G-~~~~~---K~~~~~l~~~~~~~~~~ 224 (365)
T cd03809 154 DLLRYLGVPPDKIVVIP-LGVDPRFRPP---PAEAE-VLRALYLLPRPYFLYVG-TIEPR---KNLERLLEAFARLPAKG 224 (365)
T ss_pred HHHHHhCcCHHHEEeec-cccCccccCC---CchHH-HHHHhcCCCCCeEEEeC-CCccc---cCHHHHHHHHHHHHHhc
Confidence 22 223456788998 3666632222 11111 44445566778999999 78888 99999999999999887
Q ss_pred ccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHH
Q 004092 368 SVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVK 444 (774)
Q Consensus 368 p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llE 444 (774)
++ ++++++| +.... ....+..+++++.+ +|.++|++ +++..+|+.||++++||..| |+|++++|
T Consensus 225 ~~-------~~l~i~G~~~~~~---~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e--~~~~~~~E 291 (365)
T cd03809 225 PD-------PKLVIVGKRGWLN---EELLARLRELGLGD-RVRFLGYVSDEELAALYRGARAFVFPSLYE--GFGLPVLE 291 (365)
T ss_pred CC-------CCEEEecCCcccc---HHHHHHHHHcCCCC-eEEECCCCChhHHHHHHhhhhhhcccchhc--cCCCCHHH
Confidence 77 8999999 44332 22333336678888 99999988 88999999999999999998 89999999
Q ss_pred HHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 004092 445 ALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYA 522 (774)
Q Consensus 445 AMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~ 522 (774)
||++|+|||+++.+++.|++.+ +|++++++|+++++++|.++++| ++.+.+|++++++.+++|+|+++++.|.
T Consensus 292 a~a~G~pvI~~~~~~~~e~~~~--~~~~~~~~~~~~~~~~i~~l~~~---~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 292 AMACGTPVIASNISSLPEVAGD--AALYFDPLDPEALAAAIERLLED---PALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HhcCCCcEEecCCCCccceecC--ceeeeCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9999999999999999999855 68999999999999999999999 9999999999998889999999999875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-28 Score=276.16 Aligned_cols=359 Identities=14% Similarity=0.077 Sum_probs=241.0
Q ss_pred CCCeEEEEecCCCCC-hHHHHHHHHHHHHHHcCC--eEEEEEcCCCcchh-----hhhhcCccE-------EE-----cc
Q 004092 143 RKPQLALVFPDLLID-PQQLQMVTIAIALREIGY--AIQVYSLEDGRAHE-----VWRNIGVPV-------AI-----LQ 202 (774)
Q Consensus 143 rk~rialV~~~L~~G-G~e~~v~~Lak~L~~~G~--eV~V~t~~~~~~~~-----~~~~~gi~i-------~~-----l~ 202 (774)
+|+++++++|+++.| |+|+++...+.+|++.|+ +|.++|...+.... ..+..++.+ .. ++
T Consensus 32 ~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~v~l~~~~~~~ 111 (463)
T PLN02949 32 RKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRKWIE 111 (463)
T ss_pred CCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceEEEeccccccc
Confidence 467999999999887 999999999999999999 77777754322221 122344421 11 11
Q ss_pred c--chh---H----------HHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhh-hHHHh-------
Q 004092 203 T--GRE---K----------ASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLAT-RARNY------- 259 (774)
Q Consensus 203 ~--~~~---l----------~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~-~~~k~------- 259 (774)
. +.. + ...+... ++.|++.+.... ....++ + ..++|+++.+|...... .+.+.
T Consensus 112 ~~~~~~~t~~~~~~~~~~l~~~~~~~~-~p~v~vDt~~~~-~~~pl~-~-~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~ 187 (463)
T PLN02949 112 EETYPRFTMIGQSLGSVYLAWEALCKF-TPLYFFDTSGYA-FTYPLA-R-LFGCKVVCYTHYPTISSDMISRVRDRSSMY 187 (463)
T ss_pred cccCCceehHHHHHHHHHHHHHHHHhc-CCCEEEeCCCcc-cHHHHH-H-hcCCcEEEEEeCCcchHHHHHHHhhccccc
Confidence 0 000 0 0011113 445677665421 112222 1 33689999999632110 01110
Q ss_pred ------hh--------hhhhHHHH-HHHHHHHhccEEEccCCcchh-hcccC-CCCCEEEeCCCCCCcccccccCchhhH
Q 004092 260 ------AS--------SGQLELLN-DWKKVFNRATVVVFPDYVLPM-MYSAF-DAGNYYVIPGSPAKAWEADTNMDLYND 322 (774)
Q Consensus 260 ------~~--------~~~~~li~-~~~~~~~~a~~vv~ps~~~~~-i~~~v-~~~ki~vIpg~gvd~~~~~~~~~~~k~ 322 (774)
.. ......+. .+......++.++..+..... +.... ...++.+++ +|+|...+...+.
T Consensus 188 ~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvy-p~vd~~~~~~~~~---- 262 (463)
T PLN02949 188 NNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVY-PPCDTSGLQALPL---- 262 (463)
T ss_pred CccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEc-CCCCHHHcccCCc----
Confidence 00 00001111 122223456666666555322 22211 224566666 3555422211111
Q ss_pred HHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCC--CCchHHHHHHHHH
Q 004092 323 TVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDS--TSNYSVVIEAIAH 399 (774)
Q Consensus 323 ~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~--~e~Y~~~L~~la~ 399 (774)
...+++.+++++| ++.++ ||++.+|+|+..+.++.++ ..++++|+|+| ++. .++|.+.++++++
T Consensus 263 ------~~~~~~~~il~vG-R~~~~---Kg~~llI~A~~~l~~~~~~---~~~~~~LvIvG~~~~~~~~~~~~eL~~la~ 329 (463)
T PLN02949 263 ------ERSEDPPYIISVA-QFRPE---KAHALQLEAFALALEKLDA---DVPRPKLQFVGSCRNKEDEERLQKLKDRAK 329 (463)
T ss_pred ------cccCCCCEEEEEE-eeecc---CCHHHHHHHHHHHHHhccc---cCCCcEEEEEeCCCCcccHHHHHHHHHHHH
Confidence 1123456899999 99998 9999999999988754321 11239999999 532 2456788999999
Q ss_pred HcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccc-ccccc---CccEEEE
Q 004092 400 NLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIR-KYVDD---RVNGYLF 473 (774)
Q Consensus 400 ~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~-EiV~d---g~~G~Lv 473 (774)
++++++ +|.|+|++ +++.++|+.||++|+||..| +||++++||||||+|||+++.||.. |++.+ +.+|+++
T Consensus 330 ~l~L~~-~V~f~g~v~~~el~~ll~~a~~~v~~s~~E--~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~ 406 (463)
T PLN02949 330 ELGLDG-DVEFHKNVSYRDLVRLLGGAVAGLHSMIDE--HFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA 406 (463)
T ss_pred HcCCCC-cEEEeCCCCHHHHHHHHHhCcEEEeCCccC--CCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC
Confidence 999998 99999987 88999999999999999988 8999999999999999999999975 67754 6789988
Q ss_pred cCCCHHHHHHHHHHHHH-cCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Q 004092 474 PKENIKALTHIILQVIT-NGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKL 531 (774)
Q Consensus 474 ~~~d~e~La~aI~~Ll~-d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~~ 531 (774)
+ |+++++++|.++++ + ++.+++|+++|++.+++|+++++++++.+.++++++.
T Consensus 407 ~--~~~~la~ai~~ll~~~---~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 407 T--TVEEYADAILEVLRMR---ETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred C--CHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence 5 89999999999998 4 5678899999999998899999999999999988653
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=276.69 Aligned_cols=343 Identities=12% Similarity=0.055 Sum_probs=228.2
Q ss_pred CCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh-hhhcCccEEEcccch--h--------------
Q 004092 144 KPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV-WRNIGVPVAILQTGR--E-------------- 206 (774)
Q Consensus 144 k~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~-~~~~gi~i~~l~~~~--~-------------- 206 (774)
.+|+.++... .+|.+..+..+++.|.++||+|+|++......... ....++.+..+.... .
T Consensus 3 ~~~~~~~~~~--~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (415)
T cd03816 3 RKRVCVLVLG--DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPPPPQRLNKLPFLLFAPLKVL 80 (415)
T ss_pred ccEEEEEEec--ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhcCCCEEEEECCCCccccccchHHHHHHHHHH
Confidence 3456555553 36667777899999999999999999865332222 345566666554432 0
Q ss_pred ------HHHHhhhcCccEEEEcCCchhH-H-HHHHHhCCCCCCCEEEEEcCchhh-hhHHHhhhhhhhHHHHHH-HHHHH
Q 004092 207 ------KASFVNWLNYDGILVNSLEAKV-V-ISNIMQEPFKSLPLVWTIHEGTLA-TRARNYASSGQLELLNDW-KKVFN 276 (774)
Q Consensus 207 ------l~~~i~~~~~DIIhvhs~~~~~-~-l~~Ll~~~~~~ipvI~tiHg~~l~-~~~~k~~~~~~~~li~~~-~~~~~ 276 (774)
+..+++..+||+||+|++.... . .+.++ .+..++|+|+++|+.... .............+.... +..++
T Consensus 81 ~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~-~~~~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 159 (415)
T cd03816 81 WQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLY-CLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGR 159 (415)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHH-HHHhCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHHHHHHhh
Confidence 0012344689999998755421 2 22332 234578999999974211 000000000011122222 23556
Q ss_pred hccEEEccCCcch--hhcccCCCCCEEEeCCCCCCcccccccCchh-hHHHHH-------------HhCC-CCCCEEEEE
Q 004092 277 RATVVVFPDYVLP--MMYSAFDAGNYYVIPGSPAKAWEADTNMDLY-NDTVRV-------------KMGF-KPDDLVIAI 339 (774)
Q Consensus 277 ~a~~vv~ps~~~~--~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~-k~~lR~-------------~lgl-~~~~~vIl~ 339 (774)
.++.++..+.... +...+++.+++.+||| +.+ ..+.+..... ....+. ..+. +++..++++
T Consensus 160 ~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~N-g~~-~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 237 (415)
T cd03816 160 LADYNLCVTKAMKEDLQQFNNWKIRATVLYD-RPP-EQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVS 237 (415)
T ss_pred cCCEeeecCHHHHHHHHhhhccCCCeeecCC-CCH-HHceeCcHHHHHHHHHhccccccccccccccceecCCCceEEEE
Confidence 6787777766632 2223466789999995 432 2232222211 111111 0122 234457777
Q ss_pred EecccccccccccHHHHHHHHHHchhh------cccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEcc
Q 004092 340 VGTQFMYRGLWLEHALILRALLPLFSE------VSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMA 412 (774)
Q Consensus 340 vGsrl~~~KgiKg~~lLLeA~~~L~~~------~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG 412 (774)
+| ++.+. ||++.+++|+..+.+. +|+ ++|+|+| |+.. +.++++++++++++ .+.+.|
T Consensus 238 ~g-rl~~~---K~~~~li~A~~~l~~~~~~~~~~~~-------i~l~ivG~G~~~----~~l~~~~~~~~l~~-~~~~~g 301 (415)
T cd03816 238 ST-SWTPD---EDFGILLDALVAYEKSAATGPKLPK-------LLCIITGKGPLK----EKYLERIKELKLKK-VTIRTP 301 (415)
T ss_pred ec-cccCC---CCHHHHHHHHHHHHHhhcccccCCC-------EEEEEEecCccH----HHHHHHHHHcCCCc-EEEEcC
Confidence 88 88888 9999999999998753 355 9999999 8865 78889999999987 555667
Q ss_pred Cc--ccHHHHHHHcCEEEEcCcc-CcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHH
Q 004092 413 AE--GDVDSVLNTADVVIYGSFL-EEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVI 489 (774)
Q Consensus 413 ~~--~dl~~~l~aaDI~V~PS~~-E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll 489 (774)
++ +++..+|++||++|.|+.. +..|+|++++||||||+|||+|+.+|+.|+|.++.+|++++ |+++++++|..++
T Consensus 302 ~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll 379 (415)
T cd03816 302 WLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL 379 (415)
T ss_pred cCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH
Confidence 64 8999999999999975422 11279999999999999999999999999999999999994 8999999999999
Q ss_pred HcCCCcHHHHHHHHHHHHHH
Q 004092 490 TNGKISPFARNIASIGRRSV 509 (774)
Q Consensus 490 ~d~~~~~~r~~m~~~ar~~a 509 (774)
+|.-.++.+++|+++|++.+
T Consensus 380 ~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 380 SNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred hcCCCHHHHHHHHHHHHHhh
Confidence 87000367789999999887
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-28 Score=273.52 Aligned_cols=340 Identities=12% Similarity=0.085 Sum_probs=234.5
Q ss_pred CCCeEEEEecCCC--CChHHHHHHHHHHHHHHcC-CeEEEEEcCCCcc-----------------hh----hhh--h---
Q 004092 143 RKPQLALVFPDLL--IDPQQLQMVTIAIALREIG-YAIQVYSLEDGRA-----------------HE----VWR--N--- 193 (774)
Q Consensus 143 rk~rialV~~~L~--~GG~e~~v~~Lak~L~~~G-~eV~V~t~~~~~~-----------------~~----~~~--~--- 193 (774)
.++||+++..... .+|....+..++..|.++| |+|+|+++..... .+ .|. .
T Consensus 3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v~r 82 (462)
T PLN02846 3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERISF 82 (462)
T ss_pred CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeEEE
Confidence 4689999999774 6899999999999999999 7999998854210 00 010 0
Q ss_pred ---cCccEEEc---------ccchhHHHHhhhcCccEEEEcCCchhHHH--HHHHhCCCCCCCEEEEEcCchhhhhHHHh
Q 004092 194 ---IGVPVAIL---------QTGREKASFVNWLNYDGILVNSLEAKVVI--SNIMQEPFKSLPLVWTIHEGTLATRARNY 259 (774)
Q Consensus 194 ---~gi~i~~l---------~~~~~l~~~i~~~~~DIIhvhs~~~~~~l--~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~ 259 (774)
..++.+.- .....+...++..+||+||++++...+.+ +..+..++ .++|.++|++...|. ..+
T Consensus 83 ~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~--~~vV~tyHT~y~~Y~-~~~ 159 (462)
T PLN02846 83 LPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKF--RLVIGIVHTNYLEYV-KRE 159 (462)
T ss_pred ecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcC--CcEEEEECCChHHHH-HHh
Confidence 01111100 01233556677899999999999876554 33333322 448889997443321 111
Q ss_pred h----hhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCC--
Q 004092 260 A----SSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPD-- 333 (774)
Q Consensus 260 ~----~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~-- 333 (774)
. .......+..+... ..++.+..|+....... ....+.+ .|+|...|+ +..+. .++... .++
T Consensus 160 ~~g~~~~~l~~~~~~~~~r-~~~d~vi~pS~~~~~l~-----~~~i~~v-~GVd~~~f~---~~~~~-~~~~~~-~~~~~ 227 (462)
T PLN02846 160 KNGRVKAFLLKYINSWVVD-IYCHKVIRLSAATQDYP-----RSIICNV-HGVNPKFLE---IGKLK-LEQQKN-GEQAF 227 (462)
T ss_pred ccchHHHHHHHHHHHHHHH-HhcCEEEccCHHHHHHh-----hCEEecC-ceechhhcC---CCccc-HhhhcC-CCCCc
Confidence 1 11111112222211 12566777765332211 1233333 588874332 22111 222222 333
Q ss_pred CEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEcc
Q 004092 334 DLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMA 412 (774)
Q Consensus 334 ~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG 412 (774)
.+.++|+| |+.++ ||++.+|+|++.+.+..|+ ++|+|+| |+.. +.|++.++++++.. ++ |.|
T Consensus 228 ~~~~l~vG-RL~~e---K~~~~Li~a~~~l~~~~~~-------~~l~ivGdGp~~----~~L~~~a~~l~l~~-~v-f~G 290 (462)
T PLN02846 228 TKGAYYIG-KMVWS---KGYKELLKLLHKHQKELSG-------LEVDLYGSGEDS----DEVKAAAEKLELDV-RV-YPG 290 (462)
T ss_pred ceEEEEEe-cCccc---CCHHHHHHHHHHHHhhCCC-------eEEEEECCCccH----HHHHHHHHhcCCcE-EE-ECC
Confidence 34689999 99999 9999999999999887777 9999999 9887 78899999998875 44 888
Q ss_pred CcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcC
Q 004092 413 AEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNG 492 (774)
Q Consensus 413 ~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~ 492 (774)
.. +..++|+.+|+||+||..| +||++++||||||+|||+++.++ .+++.++.+|++++ |.++++++|..++.+
T Consensus 291 ~~-~~~~~~~~~DvFv~pS~~E--t~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~~- 363 (462)
T PLN02846 291 RD-HADPLFHDYKVFLNPSTTD--VVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALAE- 363 (462)
T ss_pred CC-CHHHHHHhCCEEEECCCcc--cchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHcc-
Confidence 64 5568999999999999999 89999999999999999999998 59999999998884 899999999999987
Q ss_pred CCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 004092 493 KISPFARNIASIGRRSVKNLMALETIEGYAMLLENV 528 (774)
Q Consensus 493 ~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~l 528 (774)
+. ..++..++ +.|+|+.+++++.++++--
T Consensus 364 --~~--~~~~~~a~---~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 364 --EP--APLTDAQR---HELSWEAATERFLRVADLD 392 (462)
T ss_pred --Cc--hhHHHHHH---HhCCHHHHHHHHHHHhccC
Confidence 43 22333222 5899999999999999754
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=269.52 Aligned_cols=346 Identities=16% Similarity=0.064 Sum_probs=234.7
Q ss_pred eEEEEecCCCCC-hHHHHHHHHHHHHHHc--CCeEEEEEcCCCcch-hhh----hh------cCccEEEcc-c-------
Q 004092 146 QLALVFPDLLID-PQQLQMVTIAIALREI--GYAIQVYSLEDGRAH-EVW----RN------IGVPVAILQ-T------- 203 (774)
Q Consensus 146 rialV~~~L~~G-G~e~~v~~Lak~L~~~--G~eV~V~t~~~~~~~-~~~----~~------~gi~i~~l~-~------- 203 (774)
.++|++|+++.| |+|+++...+.+|++. +++|+|+|....... ..+ +. -++++..+. .
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 81 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEAS 81 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccc
Confidence 478999999998 9999999999999998 899999998764422 111 01 122211110 0
Q ss_pred -ch----------hHH---HHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhh-hhHHH----------
Q 004092 204 -GR----------EKA---SFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLA-TRARN---------- 258 (774)
Q Consensus 204 -~~----------~l~---~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~-~~~~k---------- 258 (774)
.. .+. ..+...+||+|+.++.....+....+ +.++|+|+.+|-.... ..+.+
T Consensus 82 ~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~---~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~ 158 (419)
T cd03806 82 TYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRL---LGGCPVGAYVHYPTISTDMLQKVRSREASYNN 158 (419)
T ss_pred cCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHH---hcCCeEEEEecCCcchHHHHHHHhhccccccC
Confidence 00 010 11223479999988755422222211 2367999999942100 00100
Q ss_pred -----------hhhhhhhHHH-HHHHHHHHhccEEEccCCcchh-hcccC-CCCCEEEeCCCCCCcccccccCchhhHHH
Q 004092 259 -----------YASSGQLELL-NDWKKVFNRATVVVFPDYVLPM-MYSAF-DAGNYYVIPGSPAKAWEADTNMDLYNDTV 324 (774)
Q Consensus 259 -----------~~~~~~~~li-~~~~~~~~~a~~vv~ps~~~~~-i~~~v-~~~ki~vIpg~gvd~~~~~~~~~~~k~~l 324 (774)
........++ .........++.++.++..... +.... ...++.+|+ +|+|...+.....
T Consensus 159 ~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~-~gvd~~~~~~~~~------ 231 (419)
T cd03806 159 SATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVY-PPCDVEELLKLPL------ 231 (419)
T ss_pred ccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEc-CCCCHHHhccccc------
Confidence 0000001111 1334456678888777665322 22222 224778887 3677633221111
Q ss_pred HHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCC--CCchHHHHHHHHHHc
Q 004092 325 RVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDS--TSNYSVVIEAIAHNL 401 (774)
Q Consensus 325 R~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~--~e~Y~~~L~~la~~l 401 (774)
....+.++++++| ++.+. ||++.+++|++.+.+..|+ ....+++|+|+| |.. ..+|.+.|+++++++
T Consensus 232 ----~~~~~~~~il~vg-r~~~~---K~~~~li~A~~~l~~~~~~--~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l 301 (419)
T cd03806 232 ----DEKTRENQILSIA-QFRPE---KNHPLQLRAFAKLLKRLPE--EIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKEL 301 (419)
T ss_pred ----ccccCCcEEEEEE-eecCC---CCHHHHHHHHHHHHHhCcc--cccCceEEEEEcCCCCcccHHHHHHHHHHHHHh
Confidence 1234557999999 99998 9999999999999877653 012249999999 532 235778899999999
Q ss_pred CCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc-ccccc---cCccEEEEcC
Q 004092 402 HYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI-RKYVD---DRVNGYLFPK 475 (774)
Q Consensus 402 gL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi-~EiV~---dg~~G~Lv~~ 475 (774)
++.+ +|+|+|.+ +++..+|+.||++|+||..| +||++++||||||+|||+++.+|. .+++. ++.+|++++
T Consensus 302 ~l~~-~V~f~g~v~~~~l~~~l~~adv~v~~s~~E--~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~- 377 (419)
T cd03806 302 GLED-KVEFVVNAPFEELLEELSTASIGLHTMWNE--HFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS- 377 (419)
T ss_pred CCCC-eEEEecCCCHHHHHHHHHhCeEEEECCccC--CcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC-
Confidence 9998 99999975 89999999999999999998 899999999999999999999875 47777 889999975
Q ss_pred CCHHHHHHHHHHHHHcCCCcHHHH-HHHHHHHHHHHhcCHHHHHH
Q 004092 476 ENIKALTHIILQVITNGKISPFAR-NIASIGRRSVKNLMALETIE 519 (774)
Q Consensus 476 ~d~e~La~aI~~Ll~d~~~~~~r~-~m~~~ar~~ak~fs~~~~a~ 519 (774)
|++++|++|.+++++ ++... .++++++..+++|+++.+.+
T Consensus 378 -d~~~la~ai~~ll~~---~~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 378 -TAEEYAEAIEKILSL---SEEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred -CHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 999999999999997 65544 56555555558899988653
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=274.32 Aligned_cols=277 Identities=15% Similarity=0.138 Sum_probs=204.0
Q ss_pred hhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc-hh
Q 004092 212 NWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL-PM 290 (774)
Q Consensus 212 ~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~-~~ 290 (774)
...++|++|++.+... ..+ ++ .....+|++.++|+............................++.++.++... ..
T Consensus 208 ~~~~~di~i~dr~~~~-~~~-~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~ 284 (500)
T TIGR02918 208 NLTKKDIIILDRSTGI-GQA-VL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQI 284 (500)
T ss_pred hCCCCCEEEEcCCccc-chH-HH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHH
Confidence 3458999999887652 222 22 23557899999997332211000000000111111111233456666665431 11
Q ss_pred hcc-----cCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchh
Q 004092 291 MYS-----AFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFS 365 (774)
Q Consensus 291 i~~-----~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~ 365 (774)
+.. .....++.+||+ |++...+. +. ...+...|+++| |+.+. ||++.+++|+..+.+
T Consensus 285 l~~~~~~~~~~~~ki~viP~-g~~~~~~~---~~----------~~r~~~~il~vG-rl~~~---Kg~~~li~A~~~l~~ 346 (500)
T TIGR02918 285 LKNQFKKYYNIEPRIYTIPV-GSLDELQY---PE----------QERKPFSIITAS-RLAKE---KHIDWLVKAVVKAKK 346 (500)
T ss_pred HHHHhhhhcCCCCcEEEEcC-CCcccccC---cc----------cccCCeEEEEEe-ccccc---cCHHHHHHHHHHHHh
Confidence 111 122467899994 44321111 10 122346899999 88998 999999999999999
Q ss_pred hcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHH
Q 004092 366 EVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVK 444 (774)
Q Consensus 366 ~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llE 444 (774)
+.|+ ++|+|+| |+.. +.++++++++++.+ +|.|+|.. ++.++|+.||++|+||..| |||++++|
T Consensus 347 ~~p~-------~~l~i~G~G~~~----~~l~~~i~~~~l~~-~V~f~G~~-~~~~~~~~adv~v~pS~~E--gfgl~~lE 411 (500)
T TIGR02918 347 SVPE-------LTFDIYGEGGEK----QKLQKIINENQAQD-YIHLKGHR-NLSEVYKDYELYLSASTSE--GFGLTLME 411 (500)
T ss_pred hCCC-------eEEEEEECchhH----HHHHHHHHHcCCCC-eEEEcCCC-CHHHHHHhCCEEEEcCccc--cccHHHHH
Confidence 8988 9999999 8765 77889999999988 99999976 8999999999999999998 89999999
Q ss_pred HHHcCCCEEEcCCc-ccccccccCccEEEEcCC----C----HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHH
Q 004092 445 ALCFRKPIIAPDLS-NIRKYVDDRVNGYLFPKE----N----IKALTHIILQVITNGKISPFARNIASIGRRSVKNLMAL 515 (774)
Q Consensus 445 AMA~G~PVIatd~g-gi~EiV~dg~~G~Lv~~~----d----~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~ 515 (774)
|||||+|||+++++ |.+|+|.+|.+|++++++ | +++||++|.+++ + ++.+++|+++|++.+++|+++
T Consensus 412 Ama~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll-~---~~~~~~~~~~a~~~a~~fs~~ 487 (500)
T TIGR02918 412 AVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYF-N---SNDIDAFHEYSYQIAEGFLTA 487 (500)
T ss_pred HHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHh-C---hHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999986 899999999999999843 3 889999999999 5 567889999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 004092 516 ETIEGYAMLLENV 528 (774)
Q Consensus 516 ~~a~~y~~L~e~l 528 (774)
.++++|.++++++
T Consensus 488 ~v~~~w~~ll~~~ 500 (500)
T TIGR02918 488 NIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999763
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=247.70 Aligned_cols=346 Identities=15% Similarity=0.152 Sum_probs=244.7
Q ss_pred eEEEEecCC--CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh-hhhcCccEEEcccc---------------hhH
Q 004092 146 QLALVFPDL--LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV-WRNIGVPVAILQTG---------------REK 207 (774)
Q Consensus 146 rialV~~~L--~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~-~~~~gi~i~~l~~~---------------~~l 207 (774)
++++|.+.+ ..||.|.++..|++.|.+.||.|.+++...++..-. ....+..++.++.. ..+
T Consensus 2 ~i~mVsdff~P~~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~ptv~~~~Pll 81 (426)
T KOG1111|consen 2 RILMVSDFFYPSTGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDFPLL 81 (426)
T ss_pred cceeeCcccccCCCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeeeecccchhhhhccCccc
Confidence 567777766 579999999999999999999999999876553211 11222334433321 112
Q ss_pred HHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc
Q 004092 208 ASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV 287 (774)
Q Consensus 208 ~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~ 287 (774)
...+...+..+||-|++.+......++-.+..|.++|+|-|. ++. ...........++...-....+..-+...++.
T Consensus 82 r~i~lrE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHS--lfG-fad~~si~~n~ll~~sL~~id~~IcVshtske 158 (426)
T KOG1111|consen 82 RPILLRERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHS--LFG-FADIGSILTNKLLPLSLANIDRIICVSHTSKE 158 (426)
T ss_pred chhhhhhceEEEecCChHHHHHHHHHHHHHhcCceEEEeccc--ccc-ccchhhhhhcceeeeeecCCCcEEEEeecCCC
Confidence 233445689999999887743444455445678999999994 221 11111111111111111111111122223333
Q ss_pred chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCC-EEEEEEecccccccccccHHHHHHHHHHchhh
Q 004092 288 LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDD-LVIAIVGTQFMYRGLWLEHALILRALLPLFSE 366 (774)
Q Consensus 288 ~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~-~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~ 366 (774)
-.+....++..++.+||| .++...|.+.+.. .+..+ ..+..++ |+.++ ||.++++++++++.++
T Consensus 159 ntvlr~~L~p~kvsvIPn-Av~~~~f~P~~~~----------~~S~~i~~ivv~s-RLvyr---KGiDll~~iIp~vc~~ 223 (426)
T KOG1111|consen 159 NTVLRGALAPAKVSVIPN-AVVTHTFTPDAAD----------KPSADIITIVVAS-RLVYR---KGIDLLLEIIPSVCDK 223 (426)
T ss_pred ceEEEeccCHhHeeeccc-eeeccccccCccc----------cCCCCeeEEEEEe-eeeec---cchHHHHHHHHHHHhc
Confidence 556677788899999995 6666444442221 23344 4555555 99999 9999999999999999
Q ss_pred cccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHH
Q 004092 367 VSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILV 443 (774)
Q Consensus 367 ~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~ll 443 (774)
+|+ ++++|+| ||.+ ..+++..+++.+++ +|.++|.+ +++.++|..-|||+.||..| .|+++++
T Consensus 224 ~p~-------vrfii~GDGPk~----i~lee~lEk~~l~~-rV~~lG~v~h~~Vr~vl~~G~IFlntSlTE--afc~~iv 289 (426)
T KOG1111|consen 224 HPE-------VRFIIIGDGPKR----IDLEEMLEKLFLQD-RVVMLGTVPHDRVRDVLVRGDIFLNTSLTE--AFCMVIV 289 (426)
T ss_pred CCC-------eeEEEecCCccc----chHHHHHHHhhccC-ceEEecccchHHHHHHHhcCcEEeccHHHH--HHHHHHH
Confidence 999 9999999 9998 66778888899999 99999977 89999999999999999999 7999999
Q ss_pred HHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHH
Q 004092 444 KALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYA 522 (774)
Q Consensus 444 EAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~ 522 (774)
|||+||+|||+|.+||++|++.++ -.+....+++++++++.+.+.. .+. .-....+.. +.|+|+.+++.-+
T Consensus 290 EAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~-----~~~-~p~~~h~~v~~~y~w~dVa~rTe 361 (426)
T KOG1111|consen 290 EAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITK-----LRT-LPLEFHDRVKKMYSWKDVAERTE 361 (426)
T ss_pred HHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHH-----hcc-CchhHHHHHHHhccHHHHHHHHH
Confidence 999999999999999999999875 2234445789999999988875 111 123334555 4599999999999
Q ss_pred HHHHHHhcC
Q 004092 523 MLLENVLKL 531 (774)
Q Consensus 523 ~L~e~ll~~ 531 (774)
++|.++.+.
T Consensus 362 kvy~r~~~t 370 (426)
T KOG1111|consen 362 KVYDRAATT 370 (426)
T ss_pred HHHHHHhhc
Confidence 999998664
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=257.44 Aligned_cols=331 Identities=14% Similarity=0.139 Sum_probs=221.9
Q ss_pred CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcc--h--hhhhhcCccEEEcc-----------------------------
Q 004092 156 IDPQQLQMVTIAIALREIGYAIQVYSLEDGRA--H--EVWRNIGVPVAILQ----------------------------- 202 (774)
Q Consensus 156 ~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~--~--~~~~~~gi~i~~l~----------------------------- 202 (774)
.+|....+.++++.|.+. |+|++++..+.+. . .......-.+..++
T Consensus 13 ~~G~~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~ 91 (397)
T TIGR03087 13 NKGDKIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLDPRVARLRSLLGLLTGEPLSLPYYRSRR 91 (397)
T ss_pred CCCCcEeHHHHHHHHHhc-CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecCcHHHHHHHHhhhcCCCCCcchhhCCHH
Confidence 467799999999999775 9999999875321 1 11111111111100
Q ss_pred cchhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchh-hh-hHH-------Hhhhhh-hhHHHHHHH
Q 004092 203 TGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTL-AT-RAR-------NYASSG-QLELLNDWK 272 (774)
Q Consensus 203 ~~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l-~~-~~~-------k~~~~~-~~~li~~~~ 272 (774)
....+...++..++|+||+++......+ .....++|+|++.|+-.. .+ ... +..... ...+....+
T Consensus 92 ~~~~l~~~~~~~~~D~v~~~~~~~~~~~----~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 167 (397)
T TIGR03087 92 LARWVNALLAAEPVDAIVVFSSAMAQYV----TPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYER 167 (397)
T ss_pred HHHHHHHHHhhCCCCEEEEeccccceec----cccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHH
Confidence 0112233455589999999986542121 112356899999996211 11 000 000000 011112233
Q ss_pred HHHHhccEEEccCCcchhhc---ccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccc
Q 004092 273 KVFNRATVVVFPDYVLPMMY---SAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGL 349 (774)
Q Consensus 273 ~~~~~a~~vv~ps~~~~~i~---~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~Kg 349 (774)
..+..++.+++.+....... ......++.+|| +|+|...+...... ...+.++.++++++| ++.+.
T Consensus 168 ~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vip-ngvd~~~f~~~~~~-------~~~~~~~~~~ilf~G-~l~~~-- 236 (397)
T TIGR03087 168 AIAARFDAATFVSRAEAELFRRLAPEAAGRITAFP-NGVDADFFSPDRDY-------PNPYPPGKRVLVFTG-AMDYW-- 236 (397)
T ss_pred HHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEee-cccchhhcCCCccc-------cCCCCCCCcEEEEEE-ecCCc--
Confidence 46677887777766532221 223456888998 58887443322111 012234557899999 88887
Q ss_pred cccHHHHH----HHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHc
Q 004092 350 WLEHALIL----RALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTA 424 (774)
Q Consensus 350 iKg~~lLL----eA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aa 424 (774)
||++.++ +++..+.++.|+ ++|+|+| |+. ..+ ++++..+ +|.|+|+++++..+|+.|
T Consensus 237 -k~~~~l~~~~~~~~~~l~~~~p~-------~~l~ivG~g~~-----~~~----~~l~~~~-~V~~~G~v~~~~~~~~~a 298 (397)
T TIGR03087 237 -PNIDAVVWFAERVFPAVRARRPA-------AEFYIVGAKPS-----PAV----RALAALP-GVTVTGSVADVRPYLAHA 298 (397)
T ss_pred -cCHHHHHHHHHHHHHHHHHHCCC-------cEEEEECCCCh-----HHH----HHhccCC-CeEEeeecCCHHHHHHhC
Confidence 7777766 556667777787 9999999 764 223 3334455 799999999999999999
Q ss_pred CEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 004092 425 DVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASI 504 (774)
Q Consensus 425 DI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ 504 (774)
|++|+||...+ |+|++++||||||+|||+|+.++. .+...+.+|++++ +|+++++++|.++++| ++.+++|+++
T Consensus 299 dv~v~Ps~~~e-G~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~-~~~~~la~ai~~ll~~---~~~~~~~~~~ 372 (397)
T TIGR03087 299 AVAVAPLRIAR-GIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA-ADPADFAAAILALLAN---PAEREELGQA 372 (397)
T ss_pred CEEEecccccC-CcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-CCHHHHHHHHHHHHcC---HHHHHHHHHH
Confidence 99999997533 899999999999999999997532 2333445699987 8999999999999999 9999999999
Q ss_pred HHHHH-HhcCHHHHHHHHHHHHH
Q 004092 505 GRRSV-KNLMALETIEGYAMLLE 526 (774)
Q Consensus 505 ar~~a-k~fs~~~~a~~y~~L~e 526 (774)
|++.+ ++|+|+.+++++.++|+
T Consensus 373 ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 373 ARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhc
Confidence 99999 67999999999999875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-26 Score=254.75 Aligned_cols=338 Identities=15% Similarity=0.086 Sum_probs=236.5
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhc---CccEEEcc---------------------
Q 004092 147 LALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNI---GVPVAILQ--------------------- 202 (774)
Q Consensus 147 ialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~---gi~i~~l~--------------------- 202 (774)
+++++..+-.+-.|..+.+-.+.|.+.+.+|.|+...-++........ ++.+....
T Consensus 2 ~~l~t~~~p~~~~~~f~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 81 (407)
T cd04946 2 LILLTNTFPGAKGESFIEPEIKYLSKSFDKIIILPTNVGKEREKVRPNGVSNIIISNYRQDKSRAKLIFLALSVFSLPFY 81 (407)
T ss_pred EEEEecCCCCCCcccccHHHHHHHHhcCCEEEEEecccccccccCCCccccceEEeecccchhhHHHHHHHHHhhhHHHH
Confidence 566677777777888999999999999999999876543322111110 11111111
Q ss_pred --------cch----hH----HHH-------------h----hhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcC
Q 004092 203 --------TGR----EK----ASF-------------V----NWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHE 249 (774)
Q Consensus 203 --------~~~----~l----~~~-------------i----~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg 249 (774)
... .. ... + ...++|++|.+..........++.++....++|.+.|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg 161 (407)
T cd04946 82 KELLKKLKRRRKNIKYFLLLLYFIKRSILLKLKYLHLLIYNSIDGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHG 161 (407)
T ss_pred HHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCceEEEEecCchHHHHHHHHHHhcCCceEEEEecc
Confidence 000 00 000 0 12456777776655533333444443333459999998
Q ss_pred chhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch-hhcc--cCCCCCEEEeCCCCCCcccccccCchhhHHHHH
Q 004092 250 GTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP-MMYS--AFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRV 326 (774)
Q Consensus 250 ~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~-~i~~--~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~ 326 (774)
..+... ... .......+..+..++.+++.+.... .+.. ....+++.+++ +|++...+.. .
T Consensus 162 ~d~~~~--~~~----~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~-~gv~~~~~~~--~-------- 224 (407)
T cd04946 162 YDLYED--RYP----SGYIPLRRYLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSY-LGVSDPGIIS--K-------- 224 (407)
T ss_pred chhhhh--hcc----ccchHHHHHHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEE-CCcccccccC--C--------
Confidence 554311 110 0111122234566777766655522 2222 23346778887 4666532211 1
Q ss_pred HhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCC
Q 004092 327 KMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPL 405 (774)
Q Consensus 327 ~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~ 405 (774)
...++.+.++++| ++.+. ||++.+++|+..+.+.+|+ .+++++++| |+.. +.+++++++++..+
T Consensus 225 --~~~~~~~~il~~G-rl~~~---Kg~~~li~a~~~l~~~~p~-----~~l~~~iiG~g~~~----~~l~~~~~~~~~~~ 289 (407)
T cd04946 225 --PSKDDTLRIVSCS-YLVPV---KRVDLIIKALAALAKARPS-----IKIKWTHIGGGPLE----DTLKELAESKPENI 289 (407)
T ss_pred --CCCCCCEEEEEee-ccccc---cCHHHHHHHHHHHHHhCCC-----ceEEEEEEeCchHH----HHHHHHHHhcCCCc
Confidence 1234567899999 88888 9999999999999988764 227788899 7665 67888888777777
Q ss_pred ccEEEccCc--ccHHHHHHH--cCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcC-CCHHH
Q 004092 406 GVVKHMAAE--GDVDSVLNT--ADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPK-ENIKA 480 (774)
Q Consensus 406 ~~V~flG~~--~dl~~~l~a--aDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~-~d~e~ 480 (774)
+|.|+|++ +++..+|+. +|++++||..| |+|++++||||||+|||+|++||++|++.++.+|+++++ +|+++
T Consensus 290 -~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~E--g~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~ 366 (407)
T cd04946 290 -SVNFTGELSNSEVYKLYKENPVDVFVNLSESE--GLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNE 366 (407)
T ss_pred -eEEEecCCChHHHHHHHhhcCCCEEEeCCccc--cccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHH
Confidence 89999988 578899976 78999999998 899999999999999999999999999999999999987 48999
Q ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHH
Q 004092 481 LTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYA 522 (774)
Q Consensus 481 La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~ 522 (774)
++++|.++++| ++.+++|+++|++.+ ++|+++.+.+.|.
T Consensus 367 la~~I~~ll~~---~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 367 LVSSLSKFIDN---EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHhC---HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999999 999999999999999 6799999988775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-25 Score=249.92 Aligned_cols=277 Identities=11% Similarity=0.103 Sum_probs=199.0
Q ss_pred hhHHHHhhhcCccEEEEcCCchhHHH--HHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhH----HHHHHHHHHHhc
Q 004092 205 REKASFVNWLNYDGILVNSLEAKVVI--SNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLE----LLNDWKKVFNRA 278 (774)
Q Consensus 205 ~~l~~~i~~~~~DIIhvhs~~~~~~l--~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~----li~~~~~~~~~a 278 (774)
..+...+...+|||||+++|...+.. +..++.++ + |+|.++|++...| +..+....... .+..+-..+. +
T Consensus 424 gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~eY-l~~y~~g~L~~~llk~l~~~v~r~h-c 499 (794)
T PLN02501 424 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLEY-IKREKNGALQAFFVKHINNWVTRAY-C 499 (794)
T ss_pred HHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHHH-HhHhcchhHHHHHHHHHHHHHHHhh-C
Confidence 34566778899999999999875555 33444433 4 8999999744332 11111111111 2222222111 6
Q ss_pred cEEEccCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHH
Q 004092 279 TVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILR 358 (774)
Q Consensus 279 ~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLe 358 (774)
+.+..|+...... ....+..+ .|||...|. +..+...+.+++.......++++| |+.+. ||++.||+
T Consensus 500 D~VIaPS~atq~L----~~~vI~nV--nGVDte~F~---P~~r~~~~r~lgi~~~~kgiLfVG-RLa~E---KGld~LLe 566 (794)
T PLN02501 500 HKVLRLSAATQDL----PKSVICNV--HGVNPKFLK---IGEKVAEERELGQQAFSKGAYFLG-KMVWA---KGYRELID 566 (794)
T ss_pred CEEEcCCHHHHHh----cccceeec--ccccccccC---CcchhHHHHhcCCccccCceEEEE-ccccc---CCHHHHHH
Confidence 7777776443321 22222222 388884333 322222335667665455689999 99999 99999999
Q ss_pred HHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCC
Q 004092 359 ALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQT 437 (774)
Q Consensus 359 A~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qG 437 (774)
|++.+.++.|+ ++|+|+| |+.. +.+++++.++++ .|.|+|..+++..+|+.+|+||+||..| |
T Consensus 567 Ala~L~~~~pn-------vrLvIVGDGP~r----eeLe~la~eLgL---~V~FLG~~dd~~~lyasaDVFVlPS~sE--g 630 (794)
T PLN02501 567 LLAKHKNELDG-------FNLDVFGNGEDA----HEVQRAAKRLDL---NLNFLKGRDHADDSLHGYKVFINPSISD--V 630 (794)
T ss_pred HHHHHHhhCCC-------eEEEEEcCCccH----HHHHHHHHHcCC---EEEecCCCCCHHHHHHhCCEEEECCCcc--c
Confidence 99999887777 9999999 9876 778899998776 4899999988999999999999999999 8
Q ss_pred ccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHH
Q 004092 438 FPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALET 517 (774)
Q Consensus 438 fp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~ 517 (774)
||++++||||||+|||+++.+|. +.+.++.+|+++ +|+++++++|.+++.+ +..+..+.. ...++|+.+
T Consensus 631 FGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LLsd---~~~rl~~~a-----~~~~SWeAa 699 (794)
T PLN02501 631 LCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEALAN---EPQPLTPEQ-----RYNLSWEAA 699 (794)
T ss_pred chHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHHhC---chhhhHHHH-----HhhCCHHHH
Confidence 99999999999999999999985 447777888765 6899999999999999 765433332 347999999
Q ss_pred HHHHHHHH
Q 004092 518 IEGYAMLL 525 (774)
Q Consensus 518 a~~y~~L~ 525 (774)
++++.+.-
T Consensus 700 adrLle~~ 707 (794)
T PLN02501 700 TQRFMEYS 707 (794)
T ss_pred HHHHHHhh
Confidence 99988754
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=247.81 Aligned_cols=271 Identities=16% Similarity=0.184 Sum_probs=201.1
Q ss_pred cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc-hhhc
Q 004092 214 LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL-PMMY 292 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~-~~i~ 292 (774)
.++|+|+++.+..... .+.. .....+.+.++|+.......... .................++.+++++... ..+.
T Consensus 98 ~~~diii~~~~~~~~~--~~~~-~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~ 173 (372)
T cd04949 98 TKPDVFILDRPTLDGQ--ALLN-MKKAAKVVVVLHSNHVSDNNDPV-HSLINNFYEYVFENLDKVDGVIVATEQQKQDLQ 173 (372)
T ss_pred CCCCEEEECCccccch--hHHh-ccCCceEEEEEChHHhCCccccc-ccccchhhHHHHhChhhCCEEEEccHHHHHHHH
Confidence 6899999998876422 2222 23446788999963322110000 0000010111111234555666655442 2222
Q ss_pred ccCC-CCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCC
Q 004092 293 SAFD-AGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVEN 371 (774)
Q Consensus 293 ~~v~-~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~ 371 (774)
..+. ..++.+||+ |++...+.... ....+...++++| ++.+. ||++.+++|+..+.+++|+
T Consensus 174 ~~~~~~~~v~~ip~-g~~~~~~~~~~-----------~~~~~~~~i~~vg-rl~~~---K~~~~li~a~~~l~~~~~~-- 235 (372)
T cd04949 174 KQFGNYNPIYTIPV-GSIDPLKLPAQ-----------FKQRKPHKIITVA-RLAPE---KQLDQLIKAFAKVVKQVPD-- 235 (372)
T ss_pred HHhCCCCceEEEcc-cccChhhcccc-----------hhhcCCCeEEEEE-ccCcc---cCHHHHHHHHHHHHHhCCC--
Confidence 2222 234888883 66652221110 0123456899999 88888 9999999999999998888
Q ss_pred CCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCC
Q 004092 372 ESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRK 450 (774)
Q Consensus 372 ~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~ 450 (774)
++|+|+| |+.. ..++..++++++.+ +|.+.|+.+++..+|+.||++|+||..| |||++++|||+||+
T Consensus 236 -----~~l~i~G~g~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~S~~E--g~~~~~lEAma~G~ 303 (372)
T cd04949 236 -----ATLDIYGYGDEE----EKLKELIEELGLED-YVFLKGYTRDLDEVYQKAQLSLLTSQSE--GFGLSLMEALSHGL 303 (372)
T ss_pred -----cEEEEEEeCchH----HHHHHHHHHcCCcc-eEEEcCCCCCHHHHHhhhhEEEeccccc--ccChHHHHHHhCCC
Confidence 9999999 7765 56778888899998 9999999899999999999999999988 89999999999999
Q ss_pred CEEEcCCc-ccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 004092 451 PIIAPDLS-NIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGY 521 (774)
Q Consensus 451 PVIatd~g-gi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y 521 (774)
|||+++.+ |..+++.++.+|++++++|+++++++|..++++ ++.+++|++++++.+++|++++++++|
T Consensus 304 PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 304 PVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLND---PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred CEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999987 889999999999999999999999999999999 999999999999999999999998865
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-25 Score=242.12 Aligned_cols=318 Identities=14% Similarity=0.113 Sum_probs=205.8
Q ss_pred eEEEEecCCC-CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEE--------------EcccchhHHHH
Q 004092 146 QLALVFPDLL-IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVA--------------ILQTGREKASF 210 (774)
Q Consensus 146 rialV~~~L~-~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~--------------~l~~~~~l~~~ 210 (774)
||+++++.+. .||+|+++.++++.|.+. ++..+...............+... ...........
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFPDA--DIFTLVDDPDKLPRLLRLKKIRTSFIQKLPFARRRYRKYLPLMPLAIEQ 78 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCCCC--CEEEEeecCCccchhhcCCceeechhhhchhhHhhHhhhCchhhHHHHh
Confidence 5788888776 799999999999998753 222222222111111110000000 00111112223
Q ss_pred hhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchh-hhhH-HHhhh----------hhhhHHHH-HHHHHHHh
Q 004092 211 VNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTL-ATRA-RNYAS----------SGQLELLN-DWKKVFNR 277 (774)
Q Consensus 211 i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l-~~~~-~k~~~----------~~~~~li~-~~~~~~~~ 277 (774)
++..+||+|++++.... .. +. ...++|.++++|.... .+.. ..+.. ......+. .....+..
T Consensus 79 ~~~~~~D~v~~~~~~~~--~~-~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (351)
T cd03804 79 FDLSGYDLVISSSHAVA--KG-VI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAAR 153 (351)
T ss_pred ccccCCCEEEEcCcHHh--cc-cc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcC
Confidence 44578999998775431 11 11 2456899999996210 0000 00000 00011111 12234567
Q ss_pred ccEEEccCCcchhh-cccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHH
Q 004092 278 ATVVVFPDYVLPMM-YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALI 356 (774)
Q Consensus 278 a~~vv~ps~~~~~i-~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lL 356 (774)
++.+++.+...... ..... .+..+|+ +|+|...+... +..+..++++| ++.+. ||++.+
T Consensus 154 ~d~ii~~S~~~~~~~~~~~~-~~~~vi~-~~~d~~~~~~~--------------~~~~~~il~~G-~~~~~---K~~~~l 213 (351)
T cd03804 154 VDYFIANSRFVARRIKKYYG-RDATVIY-PPVDTDRFTPA--------------EEKEDYYLSVG-RLVPY---KRIDLA 213 (351)
T ss_pred CCEEEECCHHHHHHHHHHhC-CCcEEEC-CCCCHhhcCcC--------------CCCCCEEEEEE-cCccc---cChHHH
Confidence 77777776653222 22222 3456777 36776322211 12344788999 88888 999999
Q ss_pred HHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCcc
Q 004092 357 LRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFL 433 (774)
Q Consensus 357 LeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~ 433 (774)
++|++.+. ++|+|+| |+.. +.+++ +..+ +|.|+|++ +++.++|++||++|+||.
T Consensus 214 i~a~~~~~------------~~l~ivG~g~~~----~~l~~-----~~~~-~V~~~g~~~~~~~~~~~~~ad~~v~ps~- 270 (351)
T cd03804 214 IEAFNKLG------------KRLVVIGDGPEL----DRLRA-----KAGP-NVTFLGRVSDEELRDLYARARAFLFPAE- 270 (351)
T ss_pred HHHHHHCC------------CcEEEEECChhH----HHHHh-----hcCC-CEEEecCCCHHHHHHHHHhCCEEEECCc-
Confidence 99998763 5899999 7654 33433 4455 89999988 559999999999999999
Q ss_pred CcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcC
Q 004092 434 EEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLM 513 (774)
Q Consensus 434 E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs 513 (774)
| |||++++||||||+|||+++.++..|++.++.+|++++++|+++++++|..+++| ++ .+.+.+++.+++|+
T Consensus 271 e--~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~---~~---~~~~~~~~~~~~~~ 342 (351)
T cd03804 271 E--DFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKN---ED---FDPQAIRAHAERFS 342 (351)
T ss_pred C--CCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhC---cc---cCHHHHHHHHHhcC
Confidence 7 8999999999999999999999999999999999999999999999999999999 74 23444555567799
Q ss_pred HHHHHHHH
Q 004092 514 ALETIEGY 521 (774)
Q Consensus 514 ~~~~a~~y 521 (774)
+++..+++
T Consensus 343 ~~~~~~~~ 350 (351)
T cd03804 343 ESRFREKI 350 (351)
T ss_pred HHHHHHHh
Confidence 98887754
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-24 Score=236.13 Aligned_cols=302 Identities=13% Similarity=0.053 Sum_probs=198.9
Q ss_pred CCChHHHHHHHHHHHHHHcCC-eEEEEEcCCCc-chhhhhhcCccEEEcccchh-------------HHH----------
Q 004092 155 LIDPQQLQMVTIAIALREIGY-AIQVYSLEDGR-AHEVWRNIGVPVAILQTGRE-------------KAS---------- 209 (774)
Q Consensus 155 ~~GG~e~~v~~Lak~L~~~G~-eV~V~t~~~~~-~~~~~~~~gi~i~~l~~~~~-------------l~~---------- 209 (774)
.-.|.+..+..++..|.++|+ +|+|++..... ........+++++.++.... +..
T Consensus 13 ~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (371)
T PLN02275 13 GDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQPRLLQRLPRVLYALALLLKVAIQFLMLLW 92 (371)
T ss_pred cCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCCcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 345667778888888888775 89999986533 22333444566666541100 111
Q ss_pred --HhhhcCccEEEEcCCchhH--HHHHHHhCCCCCCCEEEEEcCchhh-hhHHHhhhhhhhHHHH-HHHHHHHhccEEEc
Q 004092 210 --FVNWLNYDGILVNSLEAKV--VISNIMQEPFKSLPLVWTIHEGTLA-TRARNYASSGQLELLN-DWKKVFNRATVVVF 283 (774)
Q Consensus 210 --~i~~~~~DIIhvhs~~~~~--~l~~Ll~~~~~~ipvI~tiHg~~l~-~~~~k~~~~~~~~li~-~~~~~~~~a~~vv~ 283 (774)
..+..+||+||+|++.... ....++. +..++|+|+++|+.... .............+.. ..+..++.++.+++
T Consensus 93 ~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~ 171 (371)
T PLN02275 93 FLCVKIPRPDVFLVQNPPSVPTLAVVKLAC-WLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLC 171 (371)
T ss_pred HHHhhCCCCCEEEEeCCCCcHHHHHHHHHH-HHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEE
Confidence 1234799999998765421 2233333 24568999999974211 0000000011111222 23336677888888
Q ss_pred cCCcchhh-c--ccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHH
Q 004092 284 PDYVLPMM-Y--SAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRAL 360 (774)
Q Consensus 284 ps~~~~~i-~--~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~ 360 (774)
++...... . .+++ +.+|+| ++ ...+.+.... .... .++..+++++| ++.++ ||++.+++|+
T Consensus 172 ~S~~~~~~l~~~~g~~---i~vi~n-~~-~~~f~~~~~~------~~~~-~~~~~~i~~~g-rl~~~---k~~~~li~a~ 235 (371)
T PLN02275 172 VTKAMQHELDQNWGIR---ATVLYD-QP-PEFFRPASLE------IRLR-PNRPALVVSST-SWTPD---EDFGILLEAA 235 (371)
T ss_pred CCHHHHHHHHHhcCCC---eEEECC-CC-HHHcCcCCch------hccc-CCCcEEEEEeC-ceecc---CCHHHHHHHH
Confidence 77663221 1 1232 778885 32 2222221110 0111 23345677888 88888 9999999999
Q ss_pred HHchh-----------------hcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEcc-Cc--ccHHH
Q 004092 361 LPLFS-----------------EVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMA-AE--GDVDS 419 (774)
Q Consensus 361 ~~L~~-----------------~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG-~~--~dl~~ 419 (774)
..+.. ++|+ ++|+|+| |+.. +.+++.++++++++ |.|.+ ++ +++..
T Consensus 236 ~~l~~~~~~~~~~~~~~~~~~~~~~~-------i~l~ivG~G~~~----~~l~~~~~~~~l~~--v~~~~~~~~~~~~~~ 302 (371)
T PLN02275 236 VMYDRRVAARLNESDSASGKQSLYPR-------LLFIITGKGPQK----AMYEEKISRLNLRH--VAFRTMWLEAEDYPL 302 (371)
T ss_pred HHHHhhhhhccccccccccccccCCC-------eEEEEEeCCCCH----HHHHHHHHHcCCCc--eEEEcCCCCHHHHHH
Confidence 88742 2345 9999999 8876 78889999999987 67654 44 89999
Q ss_pred HHHHcCEEEEcC--ccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHH
Q 004092 420 VLNTADVVIYGS--FLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVI 489 (774)
Q Consensus 420 ~l~aaDI~V~PS--~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll 489 (774)
+|++||++|+|+ ...+ |+|++++||||||+|||+++.||.+|+|.++.+|++++ |+++|+++|.+++
T Consensus 303 ~l~~aDv~v~~~~s~~~e-~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 303 LLGSADLGVSLHTSSSGL-DLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HHHhCCEEEEeccccccc-cccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 999999999864 2212 89999999999999999999999999999999999997 6999999998764
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-23 Score=230.10 Aligned_cols=288 Identities=14% Similarity=0.119 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccchhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCC
Q 004092 162 QMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSL 241 (774)
Q Consensus 162 ~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~i 241 (774)
+-.-+.+.|...|++|+++....-. ...+.- ++...+.|+.... ...+-. .+..++
T Consensus 15 ~~~~~~~~l~~~~~~~~~~~~~~~~---------------------~~~~~~-~~~~~~~~~~~~~-~~~~~~-~~~~~~ 70 (331)
T PHA01630 15 QKKLLEEHLKMLGHKVTVFEKPTLT---------------------KYQLPP-GYPIYIYYTIFNS-MLFWKG-IPHVGK 70 (331)
T ss_pred HHHHHHHHHHHhCCeeEEEeccchh---------------------hhhcCC-CCceeeehhhhhH-HHHHhh-ccccCC
Confidence 4445668899999999988643210 011111 3344444544332 222211 124578
Q ss_pred CEEEEEcCchhhhhHHHhhhhhhhHHHHHHHH-H-HHhccEEEccCCcchh--hcccCC-CCCEEEeCCCCCCccccccc
Q 004092 242 PLVWTIHEGTLATRARNYASSGQLELLNDWKK-V-FNRATVVVFPDYVLPM--MYSAFD-AGNYYVIPGSPAKAWEADTN 316 (774)
Q Consensus 242 pvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~-~-~~~a~~vv~ps~~~~~--i~~~v~-~~ki~vIpg~gvd~~~~~~~ 316 (774)
|+++++|+.. .+...+.. . ...++.+++++..... ...+++ .+++.+||+ |+|...+...
T Consensus 71 ~~v~e~~~~~--------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpN-GVd~~~f~~~ 135 (331)
T PHA01630 71 NIVFEVADTD--------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPH-NLNPRMFEYK 135 (331)
T ss_pred ceEEEEEeec--------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECC-CCCHHHcCCC
Confidence 9999999621 11111111 1 2456666666655322 122333 457899994 8887433221
Q ss_pred CchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHH
Q 004092 317 MDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIE 395 (774)
Q Consensus 317 ~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~ 395 (774)
.. -..+. +++++|+++.+. ||++.+++|++.+.++.++ ++++|+| ++.. ..+
T Consensus 136 ~~-----------~~~~~-~vl~~~g~~~~~---Kg~d~Li~A~~~l~~~~~~-------~~llivG~~~~~----~~l- 188 (331)
T PHA01630 136 PK-----------EKPHP-CVLAILPHSWDR---KGGDIVVKIFHELQNEGYD-------FYFLIKSSNMLD----PRL- 188 (331)
T ss_pred cc-----------ccCCC-EEEEEecccccc---CCHHHHHHHHHHHHhhCCC-------EEEEEEeCcccc----hhh-
Confidence 11 01234 444455488777 9999999999999987777 9999999 5433 111
Q ss_pred HHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcC
Q 004092 396 AIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPK 475 (774)
Q Consensus 396 ~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~ 475 (774)
.++.. +......+++..+|+.||++|+||..| |||++++||||||+|||+|+.||++|++.++.||++++.
T Consensus 189 -----~~~~~--~~~~v~~~~l~~~y~~aDv~v~pS~~E--~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~ 259 (331)
T PHA01630 189 -----FGLNG--VKTPLPDDDIYSLFAGCDILFYPVRGG--AFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKS 259 (331)
T ss_pred -----ccccc--eeccCCHHHHHHHHHhCCEEEECCccc--cCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeee
Confidence 13332 222223489999999999999999998 899999999999999999999999999999988888753
Q ss_pred -------------------CCHHHHHHHHHHHHHcCCCc--HHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004092 476 -------------------ENIKALTHIILQVITNGKIS--PFAR-NIASIGRRSVKNLMALETIEGYAMLLEN 527 (774)
Q Consensus 476 -------------------~d~e~La~aI~~Ll~d~~~~--~~r~-~m~~~ar~~ak~fs~~~~a~~y~~L~e~ 527 (774)
.|.+++++++.+++.| + +..+ .++.+++..+++|+|++++++|.++|++
T Consensus 260 ~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~---~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 260 GRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALAN---WTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccccccCCcccccccCCCHHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 2778899999999987 5 4444 4555555666899999999999999975
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.2e-24 Score=234.58 Aligned_cols=322 Identities=13% Similarity=0.089 Sum_probs=219.6
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccch-------------------
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGR------------------- 205 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~------------------- 205 (774)
+||+++.++ .||.+.++.++++.|.++||+|++++...+......+..++++..++...
T Consensus 2 ~~i~i~~~g--~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (357)
T PRK00726 2 KKILLAGGG--TGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPKAGIEFHFIPSGGLRRKGSLANLKAPFKLLKG 79 (357)
T ss_pred cEEEEEcCc--chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccccCCCcEEEEeccCcCCCChHHHHHHHHHHHHH
Confidence 566666554 47999999999999999999999999865332223333466655554211
Q ss_pred --hHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEc
Q 004092 206 --EKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVF 283 (774)
Q Consensus 206 --~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ 283 (774)
.+.++++..+||+||+|+.... +...+.. +..++|+|++.|+.. .....++... .++.++.
T Consensus 80 ~~~~~~~ik~~~pDvv~~~~~~~~-~~~~~~~-~~~~~p~v~~~~~~~-~~~~~r~~~~--------------~~d~ii~ 142 (357)
T PRK00726 80 VLQARKILKRFKPDVVVGFGGYVS-GPGGLAA-RLLGIPLVIHEQNAV-PGLANKLLAR--------------FAKKVAT 142 (357)
T ss_pred HHHHHHHHHhcCCCEEEECCCcch-hHHHHHH-HHcCCCEEEEcCCCC-ccHHHHHHHH--------------HhchheE
Confidence 1233466679999999986552 4433333 356789998776411 1111222222 2222222
Q ss_pred cCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHH-HHHHH
Q 004092 284 PDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALIL-RALLP 362 (774)
Q Consensus 284 ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLL-eA~~~ 362 (774)
..... ... ....++.++++ |++...+.. . ..+++++++++.++++++|+. ... +++..++ +|+.+
T Consensus 143 ~~~~~--~~~-~~~~~i~vi~n-~v~~~~~~~---~---~~~~~~~~~~~~~~i~~~gg~-~~~---~~~~~~l~~a~~~ 208 (357)
T PRK00726 143 AFPGA--FPE-FFKPKAVVTGN-PVREEILAL---A---APPARLAGREGKPTLLVVGGS-QGA---RVLNEAVPEALAL 208 (357)
T ss_pred Cchhh--hhc-cCCCCEEEECC-CCChHhhcc---c---chhhhccCCCCCeEEEEECCc-HhH---HHHHHHHHHHHHH
Confidence 11111 111 45678999984 777632221 1 123356777777788888844 443 6654444 88888
Q ss_pred chhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHH
Q 004092 363 LFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEI 441 (774)
Q Consensus 363 L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~ 441 (774)
+.+. + ..++++| |+. +.+.+..+ +++ +|.+.|+++++.++|++||++|++| | +++
T Consensus 209 ~~~~-~--------~~~~~~G~g~~-----~~~~~~~~-~~~---~v~~~g~~~~~~~~~~~~d~~i~~~-----g-~~~ 264 (357)
T PRK00726 209 LPEA-L--------QVIHQTGKGDL-----EEVRAAYA-AGI---NAEVVPFIDDMAAAYAAADLVICRA-----G-AST 264 (357)
T ss_pred hhhC-c--------EEEEEcCCCcH-----HHHHHHhh-cCC---cEEEeehHhhHHHHHHhCCEEEECC-----C-HHH
Confidence 7643 2 4577888 653 34444444 555 3999999999999999999999865 2 689
Q ss_pred HHHHHHcCCCEEEcCCcc--------cccccccCccEEEEcCCC--HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHh
Q 004092 442 LVKALCFRKPIIAPDLSN--------IRKYVDDRVNGYLFPKEN--IKALTHIILQVITNGKISPFARNIASIGRRSVKN 511 (774)
Q Consensus 442 llEAMA~G~PVIatd~gg--------i~EiV~dg~~G~Lv~~~d--~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~ 511 (774)
++|||+||+|||+++.++ ..+.+.+..+|++++++| +++|+++|.++++| ++.+++|++++++.+++
T Consensus 265 ~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~ 341 (357)
T PRK00726 265 VAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD---PERLEAMAEAARALGKP 341 (357)
T ss_pred HHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHhcCCc
Confidence 999999999999987643 235676777899999887 99999999999999 99999999999999999
Q ss_pred cCHHHHHHHHHHHHH
Q 004092 512 LMALETIEGYAMLLE 526 (774)
Q Consensus 512 fs~~~~a~~y~~L~e 526 (774)
+..+.+++.+.+++.
T Consensus 342 ~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 342 DAAERLADLIEELAR 356 (357)
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999888764
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.8e-23 Score=225.52 Aligned_cols=313 Identities=14% Similarity=0.145 Sum_probs=214.4
Q ss_pred EecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc---------------------hhHH
Q 004092 150 VFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG---------------------REKA 208 (774)
Q Consensus 150 V~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~---------------------~~l~ 208 (774)
++.....||.++++..+++.|.++||+|++++...+.........++++..++.. ..+.
T Consensus 3 ~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (350)
T cd03785 3 LIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKGVLQAR 82 (350)
T ss_pred EEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhcccccCCceEEEEecCcCCCChHHHHHHHHHHHHHHHHHH
Confidence 3344456899999999999999999999999886543222222334555444321 1123
Q ss_pred HHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc
Q 004092 209 SFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL 288 (774)
Q Consensus 209 ~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~ 288 (774)
++++..+||+||+|+.... ....+.. +..++|++++.|+.. . . .. .+..+..++.+..++...
T Consensus 83 ~~i~~~~pDvI~~~~~~~~-~~~~~~a-~~~~~p~v~~~~~~~-~----~--------~~--~~~~~~~~~~vi~~s~~~ 145 (350)
T cd03785 83 KILKKFKPDVVVGFGGYVS-GPVGLAA-KLLGIPLVIHEQNAV-P----G--------LA--NRLLARFADRVALSFPET 145 (350)
T ss_pred HHHHhcCCCEEEECCCCcc-hHHHHHH-HHhCCCEEEEcCCCC-c----c--------HH--HHHHHHhhCEEEEcchhh
Confidence 4466689999999986552 3333332 355789887655311 0 0 00 111233455555553332
Q ss_pred hhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHH-HHHHHHHHchhhc
Q 004092 289 PMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHA-LILRALLPLFSEV 367 (774)
Q Consensus 289 ~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~-lLLeA~~~L~~~~ 367 (774)
... +...++.+|+ +|++...+. .. . .+++++++++.++++++|+.... |+.. .+++|+..+.+
T Consensus 146 ~~~---~~~~~~~~i~-n~v~~~~~~---~~--~-~~~~~~~~~~~~~i~~~~g~~~~----~~~~~~l~~a~~~l~~-- 209 (350)
T cd03785 146 AKY---FPKDKAVVTG-NPVREEILA---LD--R-ERARLGLRPGKPTLLVFGGSQGA----RAINEAVPEALAELLR-- 209 (350)
T ss_pred hhc---CCCCcEEEEC-CCCchHHhh---hh--h-hHHhcCCCCCCeEEEEECCcHhH----HHHHHHHHHHHHHhhc--
Confidence 211 4457888887 477753221 11 1 16678888888888888855544 5554 45688887763
Q ss_pred ccCCCCCCCeEE-EEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHH
Q 004092 368 SVENESNSPIKV-MILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKA 445 (774)
Q Consensus 368 p~~~~~~~~v~L-vIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEA 445 (774)
++ +++ +++| | .. +.+++.++++ .+ +|.+.|+++++.++|+.||++|.+| | +++++||
T Consensus 210 ~~-------~~~~~i~G~g-~~----~~l~~~~~~~--~~-~v~~~g~~~~~~~~l~~ad~~v~~s-----g-~~t~~Ea 268 (350)
T cd03785 210 KR-------LQVIHQTGKG-DL----EEVKKAYEEL--GV-NYEVFPFIDDMAAAYAAADLVISRA-----G-ASTVAEL 268 (350)
T ss_pred cC-------eEEEEEcCCc-cH----HHHHHHHhcc--CC-CeEEeehhhhHHHHHHhcCEEEECC-----C-HhHHHHH
Confidence 23 554 4566 5 22 5677777755 45 7999999999999999999999865 2 6899999
Q ss_pred HHcCCCEEEcCCcc--------cccccccCccEEEEcCC--CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHH
Q 004092 446 LCFRKPIIAPDLSN--------IRKYVDDRVNGYLFPKE--NIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMAL 515 (774)
Q Consensus 446 MA~G~PVIatd~gg--------i~EiV~dg~~G~Lv~~~--d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~ 515 (774)
|++|+|||+++.++ ..+.+.++.+|++++++ |+++++++|..+++| ++.+++|+++++++++.+..+
T Consensus 269 m~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~~~~~ 345 (350)
T cd03785 269 AALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD---PERLKAMAEAARSLARPDAAE 345 (350)
T ss_pred HHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCHHH
Confidence 99999999987654 24566666789999987 899999999999999 999999999999988888887
Q ss_pred HHHH
Q 004092 516 ETIE 519 (774)
Q Consensus 516 ~~a~ 519 (774)
++++
T Consensus 346 ~i~~ 349 (350)
T cd03785 346 RIAD 349 (350)
T ss_pred HHHh
Confidence 7764
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-22 Score=219.39 Aligned_cols=303 Identities=12% Similarity=0.072 Sum_probs=196.1
Q ss_pred CCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccchhHHHHhhhcCccEEEE--cCCchhHHH
Q 004092 153 DLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILV--NSLEAKVVI 230 (774)
Q Consensus 153 ~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~~l~~~i~~~~~DIIhv--hs~~~~~~l 230 (774)
.++.+....+..+++..|++.|.-|++++..- .++ .. . -=+|++ |-|....++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~----~~-~----------~~~~~~~~~~~~~~~~~ 61 (335)
T PHA01633 7 TMNYSSISNVSEDIAEVLRENGEIVTITKNPF----------YIP----KA-E----------KLIVFIPFHPPSLNPYL 61 (335)
T ss_pred EechhhhhhHHHHHHHHHHhCCcEEEEecCCc----------ccC----cc-c----------eEEEEeecCCcccchHH
Confidence 35567778889999999999998888876421 000 00 0 001111 112221122
Q ss_pred HHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCCEEEeCCCCCCc
Q 004092 231 SNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKA 310 (774)
Q Consensus 231 ~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~ 310 (774)
...- ....+.|++.|+|+........++..+.. .+++.++..... ....++... + +|++ |+|.
T Consensus 62 ~~~~-~~~~~~~~~tt~~g~~~~~~y~~~m~~~~-~vIavS~~t~~~------------L~~~G~~~~-i-~I~~-GVD~ 124 (335)
T PHA01633 62 YAYY-QFKGKKYFYTTCDGIPNIEIVNKYLLQDV-KFIPNSKFSAEN------------LQEVGLQVD-L-PVFH-GINF 124 (335)
T ss_pred hhhh-hhcCCCceEEeeCCcCchHHHHHHHhcCC-EEEeCCHHHHHH------------HHHhCCCCc-e-eeeC-CCCh
Confidence 2111 22335789999997442222222222211 112211111111 111223222 3 3553 7887
Q ss_pred ccccccCchhhHHHHHHhCCC-CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCc
Q 004092 311 WEADTNMDLYNDTVRVKMGFK-PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSN 389 (774)
Q Consensus 311 ~~~~~~~~~~k~~lR~~lgl~-~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~ 389 (774)
..+.+.. ......+++++.. ++.++++++| |+.++ ||++.+++|++.+.+++|+. ..+++++++|+.
T Consensus 125 ~~f~p~~-~~~~~~r~~~~~~~~~~~~i~~vG-Rl~~~---KG~~~LI~A~~~L~~~~p~~---~~~i~l~ivG~~---- 192 (335)
T PHA01633 125 KIVENAE-KLVPQLKQKLDKDFPDTIKFGIVS-GLTKR---KNMDLMLQVFNELNTKYPDI---AKKIHFFVISHK---- 192 (335)
T ss_pred hhcCccc-hhhHHHHHHhCcCCCCCeEEEEEe-CCccc---cCHHHHHHHHHHHHHhCCCc---cccEEEEEEcHH----
Confidence 4443221 1124566666654 4667899999 88888 99999999999998877640 112677777721
Q ss_pred hHHHHHHHHHHcCCCCccEEEcc---C--cccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccccc
Q 004092 390 YSVVIEAIAHNLHYPLGVVKHMA---A--EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYV 464 (774)
Q Consensus 390 Y~~~L~~la~~lgL~~~~V~flG---~--~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV 464 (774)
..+++++++ +|.|+| + .+++.++|++||++|+||..| |||++++||||||+|||+++.++++|++
T Consensus 193 -------~~~~l~l~~-~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~E--gfGlvlLEAMA~G~PVVas~~~~l~Ei~ 262 (335)
T PHA01633 193 -------QFTQLEVPA-NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTE--GFGMPVLESMAMGTPVIHQLMPPLDEFT 262 (335)
T ss_pred -------HHHHcCCCC-cEEEEecCCCCCHHHHHHHHHhCCEEEECCccc--cCCHHHHHHHHcCCCEEEccCCCceeec
Confidence 134567887 899995 3 378999999999999999998 8999999999999999999999999875
Q ss_pred cc----------------C--ccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004092 465 DD----------------R--VNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAM 523 (774)
Q Consensus 465 ~d----------------g--~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~ 523 (774)
.+ + ..|++++..|+++++++|.+++.. .+ ...++.++++.+++|+|+++.++|.+
T Consensus 263 g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~---~~-~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 263 SWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL---QD-REERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred CCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc---cC-hhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 42 2 247788889999999999999766 32 33347788899999999999998863
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.8e-22 Score=225.07 Aligned_cols=339 Identities=13% Similarity=0.117 Sum_probs=219.7
Q ss_pred CChHHHHHHHHHHHHHHcCCeEEEE-EcCCCcchhhhh---hcCccEEEccc--chhHHHHhhhcCccEEEEcCCchhHH
Q 004092 156 IDPQQLQMVTIAIALREIGYAIQVY-SLEDGRAHEVWR---NIGVPVAILQT--GREKASFVNWLNYDGILVNSLEAKVV 229 (774)
Q Consensus 156 ~GG~e~~v~~Lak~L~~~G~eV~V~-t~~~~~~~~~~~---~~gi~i~~l~~--~~~l~~~i~~~~~DIIhvhs~~~~~~ 229 (774)
..|-...+..|++.|.+.++++.|+ +........... ..++.+..++. ...+..+++..+||+||++.....+.
T Consensus 59 s~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P~d~~~~~~~~l~~~~Pd~v~~~~~~~~~~ 138 (425)
T PRK05749 59 SVGETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAQALFGDDVEHRYLPYDLPGAVRRFLRFWRPKLVIIMETELWPN 138 (425)
T ss_pred CHHHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHhcCCCceEEEecCCcHHHHHHHHHhhCCCEEEEEecchhHH
Confidence 4467889999999999988665442 222211111111 11333444443 34567778999999999885543222
Q ss_pred HHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchh--hcccCCCCCEEEeCCCC
Q 004092 230 ISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPM--MYSAFDAGNYYVIPGSP 307 (774)
Q Consensus 230 l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~--i~~~v~~~ki~vIpg~g 307 (774)
+.... ...++|++.+-|..+.. ....+. .+-...+..+..++.+..++..... ...+++.+ +.+++|..
T Consensus 139 ~l~~~--~~~~ip~vl~~~~~~~~-s~~~~~-----~~~~~~r~~~~~~d~ii~~S~~~~~~l~~~g~~~~-i~vi~n~~ 209 (425)
T PRK05749 139 LIAEL--KRRGIPLVLANARLSER-SFKRYQ-----KFKRFYRLLFKNIDLVLAQSEEDAERFLALGAKNE-VTVTGNLK 209 (425)
T ss_pred HHHHH--HHCCCCEEEEeccCChh-hHHHHH-----HHHHHHHHHHHhCCEEEECCHHHHHHHHHcCCCCC-cEeccccc
Confidence 22222 35678988765531111 111111 1112233455667777776665322 22344445 77887644
Q ss_pred CCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCC
Q 004092 308 AKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDS 386 (774)
Q Consensus 308 vd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~ 386 (774)
.|.... .........++++++ +++++++++| .. . |+.+.+++|+..+.+++|+ ++|+|+| |+.
T Consensus 210 ~d~~~~-~~~~~~~~~~r~~~~--~~~~vil~~~-~~--~---~~~~~ll~A~~~l~~~~~~-------~~liivG~g~~ 273 (425)
T PRK05749 210 FDIEVP-PELAARAATLRRQLA--PNRPVWIAAS-TH--E---GEEELVLDAHRALLKQFPN-------LLLILVPRHPE 273 (425)
T ss_pred ccCCCC-hhhHHHHHHHHHHhc--CCCcEEEEeC-CC--c---hHHHHHHHHHHHHHHhCCC-------cEEEEcCCChh
Confidence 443211 111112345677776 4555677666 42 3 7789999999999888888 9999999 775
Q ss_pred CCchHHHHHHHHHHcCCCC------------ccEEEccCcccHHHHHHHcCEEEE-cCccCcCCccHHHHHHHHcCCCEE
Q 004092 387 TSNYSVVIEAIAHNLHYPL------------GVVKHMAAEGDVDSVLNTADVVIY-GSFLEEQTFPEILVKALCFRKPII 453 (774)
Q Consensus 387 ~e~Y~~~L~~la~~lgL~~------------~~V~flG~~~dl~~~l~aaDI~V~-PS~~E~qGfp~~llEAMA~G~PVI 453 (774)
+ .+.+++.++++|+.. ..|.+.+...++..+|+.||++++ +|..| ++|.+++||||||+|||
T Consensus 274 r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~e--~~g~~~lEAma~G~PVI 348 (425)
T PRK05749 274 R---FKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVK--RGGHNPLEPAAFGVPVI 348 (425)
T ss_pred h---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcCC--CCCCCHHHHHHhCCCEE
Confidence 3 156888888888852 135555556799999999999655 67766 79999999999999999
Q ss_pred EcCC-cccccccccC-ccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 004092 454 APDL-SNIRKYVDDR-VNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVL 529 (774)
Q Consensus 454 atd~-ggi~EiV~dg-~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll 529 (774)
+++. ++..+++++. .+|++++++|+++|+++|.++++| ++.+++|+++|++.+++. ....+++.+++.+.+
T Consensus 349 ~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~---~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l 421 (425)
T PRK05749 349 SGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTD---PDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYL 421 (425)
T ss_pred ECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhc
Confidence 9765 5566655442 358888889999999999999999 999999999999999543 245566666665543
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=219.80 Aligned_cols=314 Identities=14% Similarity=0.162 Sum_probs=204.1
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc---------------------
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG--------------------- 204 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~--------------------- 204 (774)
+|.++.+.. ||.......+++.|.++||+|++++...+......+..++++..++..
T Consensus 2 ~i~~~~g~~--~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 79 (348)
T TIGR01133 2 KVVLAAGGT--GGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVPKAGIEFYFIPVGGLRRKGSFRLIKTPLKLLKAV 79 (348)
T ss_pred eEEEEeCcc--HHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccccCCCceEEEeccCcCCCChHHHHHHHHHHHHHH
Confidence 566665553 455557789999999999999999864432222223345655544321
Q ss_pred hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEcc
Q 004092 205 REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFP 284 (774)
Q Consensus 205 ~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~p 284 (774)
..+.++++..+||+||+|+.... ....++. +..++|+|++.|+. ..... .+..+..++.+...
T Consensus 80 ~~l~~~i~~~~pDvVi~~~~~~~-~~~~~~~-~~~~~p~v~~~~~~-~~~~~--------------~~~~~~~~d~ii~~ 142 (348)
T TIGR01133 80 FQARRILKKFKPDAVIGFGGYVS-GPAGLAA-KLLGIPLFHHEQNA-VPGLT--------------NKLLSRFAKKVLIS 142 (348)
T ss_pred HHHHHHHHhcCCCEEEEcCCccc-HHHHHHH-HHcCCCEEEECCCC-CccHH--------------HHHHHHHhCeeEEC
Confidence 12344566789999999986652 3333333 24567887544421 11001 11122344544443
Q ss_pred CCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHH-HHHHHHHHc
Q 004092 285 DYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHA-LILRALLPL 363 (774)
Q Consensus 285 s~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~-lLLeA~~~L 363 (774)
+...... + +..+|+ +|++...+... . .+..++++++.++++++|+... . |++. .+++|+..+
T Consensus 143 ~~~~~~~---~---~~~~i~-n~v~~~~~~~~--~----~~~~~~~~~~~~~i~~~gg~~~-~---~~~~~~l~~a~~~l 205 (348)
T TIGR01133 143 FPGAKDH---F---EAVLVG-NPVRQEIRSLP--V----PRERFGLREGKPTILVLGGSQG-A---KILNELVPKALAKL 205 (348)
T ss_pred chhHhhc---C---CceEEc-CCcCHHHhccc--c----hhhhcCCCCCCeEEEEECCchh-H---HHHHHHHHHHHHHH
Confidence 3221111 1 235666 47765222111 1 1335678888889999984433 4 7754 456888877
Q ss_pred hhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHH
Q 004092 364 FSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILV 443 (774)
Q Consensus 364 ~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~ll 443 (774)
.+. + +++++++|... .+.+++.++++++.+ .|.|. .. ++.++|++||++|.+| | |++++
T Consensus 206 ~~~--~-------~~~~~~~g~~~---~~~l~~~~~~~~l~~-~v~~~-~~-~~~~~l~~ad~~v~~~-----g-~~~l~ 264 (348)
T TIGR01133 206 AEK--G-------IQIVHQTGKND---LEKVKNVYQELGIEA-IVTFI-DE-NMAAAYAAADLVISRA-----G-ASTVA 264 (348)
T ss_pred hhc--C-------cEEEEECCcch---HHHHHHHHhhCCceE-EecCc-cc-CHHHHHHhCCEEEECC-----C-hhHHH
Confidence 653 2 45544443221 166788888888866 56666 33 8999999999999864 3 78999
Q ss_pred HHHHcCCCEEEcCCcc-------cccccccCccEEEEcCCC--HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCH
Q 004092 444 KALCFRKPIIAPDLSN-------IRKYVDDRVNGYLFPKEN--IKALTHIILQVITNGKISPFARNIASIGRRSVKNLMA 514 (774)
Q Consensus 444 EAMA~G~PVIatd~gg-------i~EiV~dg~~G~Lv~~~d--~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~ 514 (774)
|||++|+|+|+++.++ ..+++.++.+|++++++| +++++++|.++++| ++.+++|+++++++++....
T Consensus 265 Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~~~~ 341 (348)
T TIGR01133 265 ELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD---PANLEAMAEAARKLAKPDAA 341 (348)
T ss_pred HHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHhcCCccHH
Confidence 9999999999998764 235788888999998876 99999999999999 99999999999988877777
Q ss_pred HHHHH
Q 004092 515 LETIE 519 (774)
Q Consensus 515 ~~~a~ 519 (774)
+++++
T Consensus 342 ~~i~~ 346 (348)
T TIGR01133 342 KRIAE 346 (348)
T ss_pred HHHHh
Confidence 76654
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=199.13 Aligned_cols=167 Identities=20% Similarity=0.354 Sum_probs=150.4
Q ss_pred hHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhh-cccCCCCCCCeEEEEEe-CCCCCchHHHHHHHH
Q 004092 321 NDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSE-VSVENESNSPIKVMILS-GDSTSNYSVVIEAIA 398 (774)
Q Consensus 321 k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~-~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la 398 (774)
++..+.+.+.++++++|+++| ++.+. ||++.+++|+..+.++ .++ ++++|+| +... ..++..+
T Consensus 2 ~~~~~~~~~~~~~~~~il~~g-~~~~~---K~~~~li~a~~~l~~~~~~~-------~~l~i~G~~~~~----~~~~~~~ 66 (172)
T PF00534_consen 2 KDKLREKLKIPDKKKIILFIG-RLDPE---KGIDLLIEAFKKLKEKKNPN-------YKLVIVGDGEYK----KELKNLI 66 (172)
T ss_dssp HHHHHHHTTT-TTSEEEEEES-ESSGG---GTHHHHHHHHHHHHHHHHTT-------EEEEEESHCCHH----HHHHHHH
T ss_pred hHHHHHHcCCCCCCeEEEEEe-cCccc---cCHHHHHHHHHHHHhhcCCC-------eEEEEEcccccc----ccccccc
Confidence 466788889999999999999 88888 9999999999999875 677 9999999 6544 7788999
Q ss_pred HHcCCCCccEEEccCcc--cHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCC
Q 004092 399 HNLHYPLGVVKHMAAEG--DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKE 476 (774)
Q Consensus 399 ~~lgL~~~~V~flG~~~--dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~ 476 (774)
+.+++.+ +|.|+|... ++..+|+.||++|+||..| |+|.+++|||+||+|||+++.++..|++.++.+|+++++.
T Consensus 67 ~~~~~~~-~i~~~~~~~~~~l~~~~~~~di~v~~s~~e--~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~ 143 (172)
T PF00534_consen 67 EKLNLKE-NIIFLGYVPDDELDELYKSSDIFVSPSRNE--GFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPN 143 (172)
T ss_dssp HHTTCGT-TEEEEESHSHHHHHHHHHHTSEEEE-BSSB--SS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTT
T ss_pred ccccccc-cccccccccccccccccccceecccccccc--ccccccccccccccceeeccccCCceeeccccceEEeCCC
Confidence 9999988 999999885 9999999999999999998 8999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 004092 477 NIKALTHIILQVITNGKISPFARNIASIGRRS 508 (774)
Q Consensus 477 d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ 508 (774)
|+++++++|.+++++ ++.++.|+++++++
T Consensus 144 ~~~~l~~~i~~~l~~---~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 144 DIEELADAIEKLLND---PELRQKLGKNARER 172 (172)
T ss_dssp SHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCC---HHHHHHHHHHhcCC
Confidence 999999999999999 99999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=230.85 Aligned_cols=293 Identities=9% Similarity=0.025 Sum_probs=196.1
Q ss_pred cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCc----hhhhhHH---Hhhhhh--hhHH---HHHH-HHHHHhccE
Q 004092 214 LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEG----TLATRAR---NYASSG--QLEL---LNDW-KKVFNRATV 280 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~----~l~~~~~---k~~~~~--~~~l---i~~~-~~~~~~a~~ 280 (774)
...|+|++|.+... .+..++.+...+.|+++++|.. ..+..+. ..+... .+.+ ...+ +.....++.
T Consensus 130 ~~~d~iwihDyhl~-llp~~lr~~~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~ 208 (460)
T cd03788 130 RPGDLVWVHDYHLL-LLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSR 208 (460)
T ss_pred CCCCEEEEeChhhh-HHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHH
Confidence 36799999999873 6666666656678999999951 1111000 000000 0000 0000 111111111
Q ss_pred EEccCCcc--hhhcccCCCCCEEEeCCCCCCcccccccCchh--hHHHHHHhCCCCCCEEEEEEecccccccccccHHHH
Q 004092 281 VVFPDYVL--PMMYSAFDAGNYYVIPGSPAKAWEADTNMDLY--NDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALI 356 (774)
Q Consensus 281 vv~ps~~~--~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~--k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lL 356 (774)
+.-++... ...+.+ ...++.++| +|+|...+....... +...++..+..+++++|+++| |+.+. ||++.+
T Consensus 209 ~l~~~~~~~~~i~~~g-~~~~i~vip-~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vg-Rl~~~---Kgi~~l 282 (460)
T cd03788 209 LLGLEVTDDGGVEYGG-RRVRVGAFP-IGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVD-RLDYS---KGIPER 282 (460)
T ss_pred HcCCcccCCceEEECC-EEEEEEEEe-CeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEec-Ccccc---CCHHHH
Confidence 11111110 001111 124578888 589986554332221 333444456667788999999 99998 999999
Q ss_pred HHHHHHchhhcccCCCCCCCeEEEEEeCC------CCCchHHHHHHHHHHcCCCC-----ccEEE-ccC--cccHHHHHH
Q 004092 357 LRALLPLFSEVSVENESNSPIKVMILSGD------STSNYSVVIEAIAHNLHYPL-----GVVKH-MAA--EGDVDSVLN 422 (774)
Q Consensus 357 LeA~~~L~~~~p~~~~~~~~v~LvIvGG~------~~e~Y~~~L~~la~~lgL~~-----~~V~f-lG~--~~dl~~~l~ 422 (774)
++|+..+.+++|+ ...+++|+++|++ ...+|.+.+++++.+++... ..|.+ .|. .+++..+|+
T Consensus 283 l~A~~~ll~~~p~---~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~ 359 (460)
T cd03788 283 LLAFERLLERYPE---WRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYR 359 (460)
T ss_pred HHHHHHHHHhChh---hcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHH
Confidence 9999999888775 1123688988832 22245556666665543211 12554 454 489999999
Q ss_pred HcCEEEEcCccCcCCccHHHHHHHHcCCC----EEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCc-HH
Q 004092 423 TADVVIYGSFLEEQTFPEILVKALCFRKP----IIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKIS-PF 497 (774)
Q Consensus 423 aaDI~V~PS~~E~qGfp~~llEAMA~G~P----VIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~-~~ 497 (774)
.||++|+||..| |||++++||||||+| ||+|+.+|..+. +.+|+++++.|++++|++|.+++++ + +.
T Consensus 360 ~aDv~v~pS~~E--g~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ai~~~l~~---~~~e 431 (460)
T cd03788 360 AADVALVTPLRD--GMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVADAIHRALTM---PLEE 431 (460)
T ss_pred hccEEEeCcccc--ccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHHHHHHHHcC---CHHH
Confidence 999999999998 899999999999999 999999888877 4579999999999999999999997 6 56
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004092 498 ARNIASIGRRSVKNLMALETIEGYAML 524 (774)
Q Consensus 498 r~~m~~~ar~~ak~fs~~~~a~~y~~L 524 (774)
++.+++++++.+++|++...++.|..-
T Consensus 432 ~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 432 RRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 778889999999999999999988753
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-21 Score=218.04 Aligned_cols=333 Identities=10% Similarity=0.075 Sum_probs=218.7
Q ss_pred CCCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcch----h---------------hhhh-c--CccEEE
Q 004092 143 RKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAH----E---------------VWRN-I--GVPVAI 200 (774)
Q Consensus 143 rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~----~---------------~~~~-~--gi~i~~ 200 (774)
+.+||+++..+. .+|....+..++++|.++||++.++........ . .+.. . .-....
T Consensus 3 ~~~rili~t~~~-G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 81 (380)
T PRK13609 3 KNPKVLILTAHY-GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVEKIYD 81 (380)
T ss_pred CCCeEEEEEcCC-CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccc
Confidence 567888888876 458889999999999999998666654321110 0 0000 0 000000
Q ss_pred cc--------cchhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHH
Q 004092 201 LQ--------TGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWK 272 (774)
Q Consensus 201 l~--------~~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~ 272 (774)
.. ....+.++++..+||+||++++.. .+..+......++|++.++++... ...+.
T Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~--~~~~~~~~~~~~ip~~~~~td~~~---~~~~~------------ 144 (380)
T PRK13609 82 KKIFSWYANFGRKRLKLLLQAEKPDIVINTFPII--AVPELKKQTGISIPTYNVLTDFCL---HKIWV------------ 144 (380)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHH--HHHHHHHhcCCCCCeEEEeCCCCC---Ccccc------------
Confidence 00 013345567778999999987765 233334344557898866553111 11111
Q ss_pred HHHHhccEEEccCCcch--hhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEeccccccccc
Q 004092 273 KVFNRATVVVFPDYVLP--MMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLW 350 (774)
Q Consensus 273 ~~~~~a~~vv~ps~~~~--~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~Kgi 350 (774)
+..++.+..++.... +...+++.+++.+++ +|++.. ......+..+++++++++++++++++|++....
T Consensus 145 --~~~ad~i~~~s~~~~~~l~~~gi~~~ki~v~G-~p~~~~---f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~--- 215 (380)
T PRK13609 145 --HREVDRYFVATDHVKKVLVDIGVPPEQVVETG-IPIRSS---FELKINPDIIYNKYQLCPNKKILLIMAGAHGVL--- 215 (380)
T ss_pred --cCCCCEEEECCHHHHHHHHHcCCChhHEEEEC-cccChH---HcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCC---
Confidence 223444444433321 122345566777763 455431 111112345788899988776666666577666
Q ss_pred ccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEc
Q 004092 351 LEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYG 430 (774)
Q Consensus 351 Kg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~P 430 (774)
|++..+++++.. .++ ++++++||.. ..+.+.+++++++++ + +|+++|+++++.++|++||++|.
T Consensus 216 k~~~~li~~l~~----~~~-------~~~viv~G~~-~~~~~~l~~~~~~~~--~-~v~~~g~~~~~~~l~~~aD~~v~- 279 (380)
T PRK13609 216 GNVKELCQSLMS----VPD-------LQVVVVCGKN-EALKQSLEDLQETNP--D-ALKVFGYVENIDELFRVTSCMIT- 279 (380)
T ss_pred cCHHHHHHHHhh----CCC-------cEEEEEeCCC-HHHHHHHHHHHhcCC--C-cEEEEechhhHHHHHHhccEEEe-
Confidence 888888888753 245 8988886532 123467777777544 4 79999999999999999999985
Q ss_pred CccCcCCccHHHHHHHHcCCCEEEcC-Ccccc----cccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 004092 431 SFLEEQTFPEILVKALCFRKPIIAPD-LSNIR----KYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIG 505 (774)
Q Consensus 431 S~~E~qGfp~~llEAMA~G~PVIatd-~ggi~----EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~a 505 (774)
+ +.|++++|||+||+|||+++ .+|.. +++.+ +|..+...|+++++++|.++++| ++.+++|++++
T Consensus 280 ---~--~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~~l~~~i~~ll~~---~~~~~~m~~~~ 349 (380)
T PRK13609 280 ---K--PGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDEEVFAKTEALLQD---DMKLLQMKEAM 349 (380)
T ss_pred ---C--CCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHHHHHHHHHHHHCC---HHHHHHHHHHH
Confidence 3 34899999999999999975 55532 23333 35555567999999999999999 99999999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHH
Q 004092 506 RRSVKNLMALETIEGYAMLLENV 528 (774)
Q Consensus 506 r~~ak~fs~~~~a~~y~~L~e~l 528 (774)
++.++.++++++++.+.++++..
T Consensus 350 ~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 350 KSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHhCCCchHHHHHHHHHHhhhhh
Confidence 98888899999999998888654
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=214.35 Aligned_cols=303 Identities=13% Similarity=0.104 Sum_probs=190.6
Q ss_pred cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhh-----------HHHhhh------hhhhHHHHHHHHHHH
Q 004092 214 LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATR-----------ARNYAS------SGQLELLNDWKKVFN 276 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~-----------~~k~~~------~~~~~li~~~~~~~~ 276 (774)
.++|++|+|.+..+ .....+......+|+|+|.|.....+. +.++.. .......++.+....
T Consensus 147 ~~~dViH~HeWm~g-~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 147 EPAVVAHFHEWQAG-VGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCeEEEEcchhHh-HHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 57999999999985 444444334667899999997433321 010000 001111223334556
Q ss_pred hccEEEccCCcchhh-cc--cCCCCCEEEeCCCCCCcccccccCch--------------hhHHHHHHhCCCCCCEEEEE
Q 004092 277 RATVVVFPDYVLPMM-YS--AFDAGNYYVIPGSPAKAWEADTNMDL--------------YNDTVRVKMGFKPDDLVIAI 339 (774)
Q Consensus 277 ~a~~vv~ps~~~~~i-~~--~v~~~ki~vIpg~gvd~~~~~~~~~~--------------~k~~lR~~lgl~~~~~vIl~ 339 (774)
.++.+...+..+... .. +.++++ ||| +|+|...+...... .+..++..++++++++++++
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll~~~pd~--ViP-NGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f 302 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLLKRKPDV--VLP-NGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFF 302 (590)
T ss_pred hCCEEEECChHHHHHHHHHhCCCCCE--EeC-CCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEE
Confidence 677766665552221 11 222233 888 48888665443311 02234666788888888877
Q ss_pred -Eeccccc-ccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCC---------CchHHH---------------
Q 004092 340 -VGTQFMY-RGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDST---------SNYSVV--------------- 393 (774)
Q Consensus 340 -vGsrl~~-~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~---------e~Y~~~--------------- 393 (774)
+| |+.+ + ||++.+|+|+++|............=+-|+|+-+... +...+.
T Consensus 303 ~~G-R~e~~n---KGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~ 378 (590)
T cd03793 303 TAG-RYEFSN---KGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKR 378 (590)
T ss_pred Eee-cccccc---CCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhh
Confidence 57 9988 9 9999999999999764322111111133333332100 011111
Q ss_pred ----------------------------------------------------HHHHHHHcCCCCc-----cEEEcc-Cc-
Q 004092 394 ----------------------------------------------------IEAIAHNLHYPLG-----VVKHMA-AE- 414 (774)
Q Consensus 394 ----------------------------------------------------L~~la~~lgL~~~-----~V~flG-~~- 414 (774)
+-..+++++|-|. .|+|.. +.
T Consensus 379 ~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~ 458 (590)
T cd03793 379 LFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLS 458 (590)
T ss_pred hhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccC
Confidence 1112222233321 245554 11
Q ss_pred -------ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----ccccccC-ccEEEEc-------C
Q 004092 415 -------GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKYVDDR-VNGYLFP-------K 475 (774)
Q Consensus 415 -------~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~EiV~dg-~~G~Lv~-------~ 475 (774)
.+..++|+.||++|+||.+| |||++++||||||+|||+|+.+|+ .|++.++ ..|+++. +
T Consensus 459 ~~~~~~g~~y~E~~~g~dl~v~PS~yE--~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~ 536 (590)
T cd03793 459 STNPLLGLDYEEFVRGCHLGVFPSYYE--PWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPD 536 (590)
T ss_pred CCCCcCCcchHHHhhhceEEEeccccC--CCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchH
Confidence 34678999999999999999 899999999999999999999998 5666554 3577776 4
Q ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH--HHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 476 ENIKALTHIILQVITNGKISPFARNIASIGR--RSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 476 ~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar--~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
.++++++++|.++++. ..++.+...+. +.++.|+|++++..|.+.++-+++
T Consensus 537 e~v~~La~~m~~~~~~----~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 537 ESVQQLTQYMYEFCQL----SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred HHHHHHHHHHHHHhCC----cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 5688899999999854 56666655554 666889999999999999987764
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=214.84 Aligned_cols=283 Identities=11% Similarity=0.047 Sum_probs=191.5
Q ss_pred cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCc---h-hhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc--
Q 004092 214 LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEG---T-LATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV-- 287 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~---~-l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~-- 287 (774)
..-|+|++|.... ..+..++.+.....++.+.+|-. + ++..+. ..+.++ .....++.++|.+..
T Consensus 126 ~~~d~vwvhDYhl-~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~lp-----~r~~il----~gll~~dligF~t~~~~ 195 (456)
T TIGR02400 126 QPGDIVWVHDYHL-MLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLP-----WRRELL----EGLLAYDLVGFQTYDDA 195 (456)
T ss_pred CCCCEEEEecchh-hHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCC-----cHHHHH----HHHhcCCEEEECCHHHH
Confidence 3458999999988 47777776666677899999951 1 111110 001111 111122333332222
Q ss_pred -----------------chhhcccCCCCCEEEeCCCCCCcccccccCchh-----hHHHHHHhCCCCCCEEEEEEecccc
Q 004092 288 -----------------LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLY-----NDTVRVKMGFKPDDLVIAIVGTQFM 345 (774)
Q Consensus 288 -----------------~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~-----k~~lR~~lgl~~~~~vIl~vGsrl~ 345 (774)
..+.+ .-...++.++| +|+|...|....... ...+|+++ +++++|+++| |+.
T Consensus 196 ~~Fl~~~~~~l~~~~~~~~~~~-~g~~~~v~viP-~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~Vg-RLd 269 (456)
T TIGR02400 196 RNFLSAVSRELGLETLPNGVES-GGRTVRVGAFP-IGIDVDRFAEQAKKPSVQKRIAELRESL---KGRKLIIGVD-RLD 269 (456)
T ss_pred HHHHHHHHHHhCCcccCCceEE-CCcEEEEEEec-CcCCHHHHHHHhcChhHHHHHHHHHHHc---CCCeEEEEcc-ccc
Confidence 00011 11234578888 589986554322211 22356655 3667999999 999
Q ss_pred cccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCC--chHHHHHHHHHHc----CC----CC-ccEEEc-cC
Q 004092 346 YRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTS--NYSVVIEAIAHNL----HY----PL-GVVKHM-AA 413 (774)
Q Consensus 346 ~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e--~Y~~~L~~la~~l----gL----~~-~~V~fl-G~ 413 (774)
+. ||++.+++|++.+.+++|+ ...++.|+++|++.+. .....+++.++++ +- .+ ..|.++ |.
T Consensus 270 ~~---KGi~~ll~A~~~ll~~~p~---~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~ 343 (456)
T TIGR02400 270 YS---KGLPERLLAFERFLEEHPE---WRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRS 343 (456)
T ss_pred cc---cCHHHHHHHHHHHHHhCcc---ccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCC
Confidence 98 9999999999999888876 1223678888743221 1223344444432 11 11 014444 43
Q ss_pred --cccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCC----EEEcCCcccccccccCccEEEEcCCCHHHHHHHHHH
Q 004092 414 --EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKP----IIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQ 487 (774)
Q Consensus 414 --~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~P----VIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~ 487 (774)
.+++..+|++||++|+||..| |||++++||||||+| ||+|+.+|..+.+. +|++++|.|++++|++|.+
T Consensus 344 ~~~~el~aly~aaDv~vv~S~~E--G~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~ 418 (456)
T TIGR02400 344 YDREELMALYRAADVGLVTPLRD--GMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIAR 418 (456)
T ss_pred CCHHHHHHHHHhCcEEEECcccc--ccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHH
Confidence 389999999999999999999 899999999999999 99999999888774 6999999999999999999
Q ss_pred HHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004092 488 VITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLL 525 (774)
Q Consensus 488 Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~ 525 (774)
++++. +++++++.+.+++++.++++...++.|.+-+
T Consensus 419 aL~~~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 419 ALTMP--LEEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHcCC--HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99850 4667788888999998899999999988644
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-20 Score=207.75 Aligned_cols=372 Identities=15% Similarity=0.149 Sum_probs=238.0
Q ss_pred CCCeEEEEecCCCCChHHHHHHHHHHHHHH---------cCCeEEEEEcCCCcc------hhhhhhcC--ccEEE----c
Q 004092 143 RKPQLALVFPDLLIDPQQLQMVTIAIALRE---------IGYAIQVYSLEDGRA------HEVWRNIG--VPVAI----L 201 (774)
Q Consensus 143 rk~rialV~~~L~~GG~e~~v~~Lak~L~~---------~G~eV~V~t~~~~~~------~~~~~~~g--i~i~~----l 201 (774)
-..+++++.+.+..||.+......+-.+.. .|++|.+++...... ........ .++.. +
T Consensus 33 ~~~~~~~~~~~~~~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~l 112 (495)
T KOG0853|consen 33 PFEHVTFIHPDLGIGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWL 112 (495)
T ss_pred cchhheeeccccccCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeec
Confidence 346689999999999999999999999999 999999998744322 11111111 11111 0
Q ss_pred ccch------------------hHHHHhhh-cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHH-hhh
Q 004092 202 QTGR------------------EKASFVNW-LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARN-YAS 261 (774)
Q Consensus 202 ~~~~------------------~l~~~i~~-~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k-~~~ 261 (774)
+... .+....+| .++|.|++.+..++..+...+..+...+++.+.+|.......-.. ...
T Consensus 113 P~~~~~~~~~~~~~~~~~il~~~~~~~~k~~~~~d~~i~d~~~~~~~l~~~~~~p~~~~~i~~~~h~~~~lla~r~g~~~ 192 (495)
T KOG0853|consen 113 PRAMGQFLEQVAGCAYLRILRIPFGILFKWAEKVDPIIEDFVSACVPLLKQLSGPDVIIKIYFYCHFPDSLLAKRLGVLK 192 (495)
T ss_pred CcccchhhhhhhccceeEEEEeccchhhhhhhhhceeecchHHHHHHHHHHhcCCcccceeEEeccchHHHhccccCccc
Confidence 0000 00111233 467888888776654454444333334678888886221100000 000
Q ss_pred hhhhHHHHHHH-HHHHhccEEEccCCcc-hhhc---ccCCCCCE-EEeCCCCCCccccc--ccCch-h-hHHHHHHhCCC
Q 004092 262 SGQLELLNDWK-KVFNRATVVVFPDYVL-PMMY---SAFDAGNY-YVIPGSPAKAWEAD--TNMDL-Y-NDTVRVKMGFK 331 (774)
Q Consensus 262 ~~~~~li~~~~-~~~~~a~~vv~ps~~~-~~i~---~~v~~~ki-~vIpg~gvd~~~~~--~~~~~-~-k~~lR~~lgl~ 331 (774)
......+...+ .....+......++.. ..+. ..++..++ ...| .+|...+. -+.+. . +...|...+..
T Consensus 193 ~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~--ei~~s~~~~~~~~~~~~~~~~~r~~~~v~ 270 (495)
T KOG0853|consen 193 VLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYP--EIDGSWFTYGQYESHLELRLPVRLYRGVS 270 (495)
T ss_pred eeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceeec--cccchhccccccccchhcccccceeeeec
Confidence 00011111111 1122222222222221 0110 11122212 2223 23321111 11111 1 33445566777
Q ss_pred CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe--C-----CCCCchHHHHHHHHHHcCCC
Q 004092 332 PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS--G-----DSTSNYSVVIEAIAHNLHYP 404 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG--G-----~~~e~Y~~~L~~la~~lgL~ 404 (774)
..+.+..-+. ++.+. |++.++++|+..+....++ ......+++++| | ...-.|...+..+++++++.
T Consensus 271 ~~d~~~~siN-~~~pg---kd~~l~l~a~~~~~~~i~~--~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~ 344 (495)
T KOG0853|consen 271 GIDRFFPSIN-RFEPG---KDQDLALPAFTLLHDSIPE--PSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL 344 (495)
T ss_pred ccceEeeeee-ecCCC---CCceeehhhHHhhhcccCC--CCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc
Confidence 7787888888 99999 9999999999999887643 233458999999 5 23346788899999999995
Q ss_pred CccEEEccCcccHHHHHHHcCE---EEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHH--
Q 004092 405 LGVVKHMAAEGDVDSVLNTADV---VIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIK-- 479 (774)
Q Consensus 405 ~~~V~flG~~~dl~~~l~aaDI---~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e-- 479 (774)
...|.|+....+...|..++|. ++.|.. | .||++++|||+||+|||||+.||..|+|.++.+|+++++ +.+
T Consensus 345 g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~-E--~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~ 420 (495)
T KOG0853|consen 345 GQFVWFLPSTTRVAKYRLAADTKGVLYQPAN-E--HFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAV 420 (495)
T ss_pred CceEEEecCCchHHHHHHHHhcceEEecCCC-C--CccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHH
Confidence 4388888877666666666664 334555 7 799999999999999999999999999999999999999 556
Q ss_pred -HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHh
Q 004092 480 -ALTHIILQVITNGKISPFARNIASIGRRSVKN-LMALETIEGYAMLLENVL 529 (774)
Q Consensus 480 -~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~-fs~~~~a~~y~~L~e~ll 529 (774)
.+|++|.++..| ++.+.+|+++|++.+++ |+|..+.++..++.....
T Consensus 421 ~~~a~~~~kl~~~---p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 421 AELADALLKLRRD---PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred HHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 699999999999 99999999999999955 999888888888877543
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-20 Score=204.41 Aligned_cols=335 Identities=10% Similarity=0.088 Sum_probs=214.4
Q ss_pred CCCeEEEEecCCCCChHHHHHHHHHHHHHHcCC---eEEEEEcCC--Cc-chh---------------hhhh-cCccEEE
Q 004092 143 RKPQLALVFPDLLIDPQQLQMVTIAIALREIGY---AIQVYSLED--GR-AHE---------------VWRN-IGVPVAI 200 (774)
Q Consensus 143 rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~---eV~V~t~~~--~~-~~~---------------~~~~-~gi~i~~ 200 (774)
+.+|++++..+. .+|--.....|.++|.+.|. ++.++.... .+ ... .|.. +...-..
T Consensus 4 ~~~~vlil~~~~-G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~~y~~~~~~ 82 (391)
T PRK13608 4 QNKKILIITGSF-GNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRPDK 82 (391)
T ss_pred CCceEEEEECCC-CchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHHHHHcCchh
Confidence 346888888765 45667788889999998864 465554322 11 111 0100 0000000
Q ss_pred c-------ccchhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHH
Q 004092 201 L-------QTGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKK 273 (774)
Q Consensus 201 l-------~~~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~ 273 (774)
+ .....+.++++..+||+|+++++.. .+..+......++|++...++.. . ...+.
T Consensus 83 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~--~~~~l~~~~~~~iP~~~v~td~~-~--~~~w~------------- 144 (391)
T PRK13608 83 LDKCFYKYYGLNKLINLLIKEKPDLILLTFPTP--VMSVLTEQFNINIPVATVMTDYR-L--HKNWI------------- 144 (391)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCcCEEEECCcHH--HHHHHHHhcCCCCCEEEEeCCCC-c--ccccc-------------
Confidence 0 0113455667789999999987755 34444433345789865444211 0 11111
Q ss_pred HHHhccEEEccCCcc--hhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccc
Q 004092 274 VFNRATVVVFPDYVL--PMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWL 351 (774)
Q Consensus 274 ~~~~a~~vv~ps~~~--~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiK 351 (774)
...++.+.+++... .+...+++.+++.++. +|++.. ......+...+.++++++++++++++||++... |
T Consensus 145 -~~~~d~~~v~s~~~~~~l~~~gi~~~ki~v~G-iPv~~~---f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~---k 216 (391)
T PRK13608 145 -TPYSTRYYVATKETKQDFIDVGIDPSTVKVTG-IPIDNK---FETPIDQKQWLIDNNLDPDKQTILMSAGAFGVS---K 216 (391)
T ss_pred -cCCCCEEEECCHHHHHHHHHcCCCHHHEEEEC-eecChH---hcccccHHHHHHHcCCCCCCCEEEEECCCcccc---h
Confidence 12344444444332 1223355667777754 566542 111122456677899988777666655588766 8
Q ss_pred cHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcC
Q 004092 352 EHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGS 431 (774)
Q Consensus 352 g~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS 431 (774)
+++.+++++. +..++ +++++++|... +..+++.+.++..+ +|.++|+++++.++|++||++|..
T Consensus 217 ~~~~li~~~~---~~~~~-------~~~vvv~G~~~----~l~~~l~~~~~~~~-~v~~~G~~~~~~~~~~~aDl~I~k- 280 (391)
T PRK13608 217 GFDTMITDIL---AKSAN-------AQVVMICGKSK----ELKRSLTAKFKSNE-NVLILGYTKHMNEWMASSQLMITK- 280 (391)
T ss_pred hHHHHHHHHH---hcCCC-------ceEEEEcCCCH----HHHHHHHHHhccCC-CeEEEeccchHHHHHHhhhEEEeC-
Confidence 9988999863 23344 78877765332 11233434344555 799999999999999999999973
Q ss_pred ccCcCCccHHHHHHHHcCCCEEEcC-Cccc----ccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 004092 432 FLEEQTFPEILVKALCFRKPIIAPD-LSNI----RKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGR 506 (774)
Q Consensus 432 ~~E~qGfp~~llEAMA~G~PVIatd-~ggi----~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar 506 (774)
..|++++|||++|+|+|+++ .+|- ..++.+...|+. .+|+++++++|.++++| ++.+++|+++++
T Consensus 281 -----~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~--~~~~~~l~~~i~~ll~~---~~~~~~m~~~~~ 350 (391)
T PRK13608 281 -----PGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI--ADTPEEAIKIVASLTNG---NEQLTNMISTME 350 (391)
T ss_pred -----CchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE--eCCHHHHHHHHHHHhcC---HHHHHHHHHHHH
Confidence 24889999999999999985 4431 223345445655 45899999999999999 999999999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 507 RSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 507 ~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
+.++.++++++++.+.++++...+
T Consensus 351 ~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 351 QDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HhcCCCCHHHHHHHHHHHhhhhhh
Confidence 999889999999999999987644
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=183.24 Aligned_cols=222 Identities=20% Similarity=0.191 Sum_probs=162.5
Q ss_pred EEEecCCC--CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccchhHHHHhhhcCccEEEEcCCc
Q 004092 148 ALVFPDLL--IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLE 225 (774)
Q Consensus 148 alV~~~L~--~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~~l~~~i~~~~~DIIhvhs~~ 225 (774)
+++..... .||.+++...+++.|.+.||+|++++ .....+...++..+||+||+|+..
T Consensus 2 ~~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~v~~--------------------~~~~~~~~~~~~~~~D~i~~~~~~ 61 (229)
T cd01635 2 LLVSTPLLPGGGGVELVLLDLAKALARRGHEVEVVA--------------------LLLLLLLRILRGFKPDVVHAHGYY 61 (229)
T ss_pred eeeccccCCCCCCchhHHHHHHHHHHHcCCeEEEEE--------------------echHHHHHHHhhcCCCEEEEcCCC
Confidence 34444443 78999999999999999999999998 122334455667899999999988
Q ss_pred hhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCCEEEeCC
Q 004092 226 AKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPG 305 (774)
Q Consensus 226 ~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~vIpg 305 (774)
...... ....+..++|++++.|+......... . . .........+
T Consensus 62 ~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~---~--~---~~~~~~~~~~--------------------------- 105 (229)
T cd01635 62 PAPLAL-LLAARLLGIPLVLTVHGVNRSLLEGV---P--L---SLLALSIGLA--------------------------- 105 (229)
T ss_pred cHHHHH-HHHHhhCCCCEEEEEcCccHhhcccC---c--H---HHHHHHHhhc---------------------------
Confidence 743333 22234667899999996332211000 0 0 0000000000
Q ss_pred CCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-C
Q 004092 306 SPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-G 384 (774)
Q Consensus 306 ~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G 384 (774)
...++| ++.+. ||++.+++|+..+.++.|+ ++++++| +
T Consensus 106 ------------------------------~~~~~g-~~~~~---k~~~~~~~a~~~l~~~~~~-------~~~~i~G~~ 144 (229)
T cd01635 106 ------------------------------DKVFVG-RLAPE---KGLDDLIEAFALLKERGPD-------LKLVIAGDG 144 (229)
T ss_pred ------------------------------ceEEEE-eeccc---CCHHHHHHHHHHHHHhCCC-------eEEEEEeCC
Confidence 011888 78887 9999999999999988877 9999999 5
Q ss_pred CCCCchHHHHHHHHHHcCCCCccEEEccCc---ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccc
Q 004092 385 DSTSNYSVVIEAIAHNLHYPLGVVKHMAAE---GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIR 461 (774)
Q Consensus 385 ~~~e~Y~~~L~~la~~lgL~~~~V~flG~~---~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~ 461 (774)
+.. ...+..+.+++..+ +|.++|+. +++..+++.||++++||..| ++|++++|||+||+|||+|+.++..
T Consensus 145 ~~~----~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e--~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 145 PER----EYLEELLAALLLLD-RVIFLGGLDPEELLALLLAAADVFVLPSLRE--GFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred CCh----HHHHHHHHhcCCcc-cEEEeCCCCcHHHHHHHhhcCCEEEeccccc--CcChHHHHHHhCCCCEEEcCCCCcc
Confidence 543 33444466677777 89999983 55666677799999999998 8999999999999999999999999
Q ss_pred cccccCccEEEE
Q 004092 462 KYVDDRVNGYLF 473 (774)
Q Consensus 462 EiV~dg~~G~Lv 473 (774)
|++.++.+|+++
T Consensus 218 e~i~~~~~g~~~ 229 (229)
T cd01635 218 EIVEDGLTGLLV 229 (229)
T ss_pred eEEECCCceEEC
Confidence 999998899874
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-18 Score=193.11 Aligned_cols=357 Identities=17% Similarity=0.189 Sum_probs=235.2
Q ss_pred CCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhh---------------------------cCccEEEcccc--
Q 004092 154 LLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRN---------------------------IGVPVAILQTG-- 204 (774)
Q Consensus 154 L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~---------------------------~gi~i~~l~~~-- 204 (774)
...||..-++..+.++|++.|++|.|+.+..+.....+.. .+++...+...
T Consensus 14 vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~ 93 (487)
T COG0297 14 VKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPAL 93 (487)
T ss_pred cccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeecccCCCcEEEecChhh
Confidence 4579999999999999999999999998765332211111 00222222100
Q ss_pred --h-------------hHHHH-------hhh----cCccEEEEcCCchhHHHHHHHhCC---CCCCCEEEEEcCchhhh-
Q 004092 205 --R-------------EKASF-------VNW----LNYDGILVNSLEAKVVISNIMQEP---FKSLPLVWTIHEGTLAT- 254 (774)
Q Consensus 205 --~-------------~l~~~-------i~~----~~~DIIhvhs~~~~~~l~~Ll~~~---~~~ipvI~tiHg~~l~~- 254 (774)
+ ++..+ ... ..|||||+|++.+. ++..++... ...+|.|+|+|.-..+.
T Consensus 94 f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~-L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~ 172 (487)
T COG0297 94 FKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTG-LLPAYLKQRYRSGYIIPTVFTIHNLAYQGL 172 (487)
T ss_pred cCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHH-HHHHHHhhcccccccCCeEEEEeeceeecc
Confidence 0 01111 111 36999999999994 666666443 45789999999711110
Q ss_pred -h--H--------HHhhhhhh--hHHHHHHHHHHHhccEEEc--cCCcchhhcccCC----------CCCEEEeCCCCCC
Q 004092 255 -R--A--------RNYASSGQ--LELLNDWKKVFNRATVVVF--PDYVLPMMYSAFD----------AGNYYVIPGSPAK 309 (774)
Q Consensus 255 -~--~--------~k~~~~~~--~~li~~~~~~~~~a~~vv~--ps~~~~~i~~~v~----------~~ki~vIpg~gvd 309 (774)
+ . ..+..-.. ..-++..+.....++.+.. |++......+... ..++.-|- +|+|
T Consensus 173 ~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~-NgiD 251 (487)
T COG0297 173 FRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGIL-NGID 251 (487)
T ss_pred cchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEE-eeEE
Confidence 0 0 01110000 0011223333444443333 2222111111110 12333333 1333
Q ss_pred cccc---------cccC------chh-hHHHHHHhCCCC--CCEEEEEEecccccccccccHHHHHHHHHHchhhcccCC
Q 004092 310 AWEA---------DTNM------DLY-NDTVRVKMGFKP--DDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVEN 371 (774)
Q Consensus 310 ~~~~---------~~~~------~~~-k~~lR~~lgl~~--~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~ 371 (774)
.... ..++ +.. +..+++.+|++. +.+++.++| |+..+ ||++++++|+..+.++.
T Consensus 252 ~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vs-Rl~~Q---KG~dl~~~~i~~~l~~~---- 323 (487)
T COG0297 252 YDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVS-RLTAQ---KGLDLLLEAIDELLEQG---- 323 (487)
T ss_pred ecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEee-ccccc---cchhHHHHHHHHHHHhC----
Confidence 2111 1111 222 567788899983 568999999 88889 99999999999999875
Q ss_pred CCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCccc-HHHHHHHcCEEEEcCccCcCCccHHHHHHHHcC
Q 004092 372 ESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGD-VDSVLNTADVVIYGSFLEEQTFPEILVKALCFR 449 (774)
Q Consensus 372 ~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~d-l~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G 449 (774)
.+++++| | +..|.+.+..+++.+.. . .....|+.+. ...+++.||++++||++| ++|++=++||..|
T Consensus 324 -----~~~vilG~g--d~~le~~~~~la~~~~~-~-~~~~i~~~~~la~~i~agaD~~lmPSrfE--PcGL~ql~amryG 392 (487)
T COG0297 324 -----WQLVLLGTG--DPELEEALRALASRHPG-R-VLVVIGYDEPLAHLIYAGADVILMPSRFE--PCGLTQLYAMRYG 392 (487)
T ss_pred -----ceEEEEecC--cHHHHHHHHHHHHhcCc-e-EEEEeeecHHHHHHHHhcCCEEEeCCcCc--CCcHHHHHHHHcC
Confidence 7999999 7 56678889999996554 2 3445566644 467899999999999999 7999999999999
Q ss_pred CCEEEcCCccccccccc--------CccEEEEcCCCHHHHHHHHHHHHHcCCCcHH-HHHHHHHHHHHHHhcCHHHHHHH
Q 004092 450 KPIIAPDLSNIRKYVDD--------RVNGYLFPKENIKALTHIILQVITNGKISPF-ARNIASIGRRSVKNLMALETIEG 520 (774)
Q Consensus 450 ~PVIatd~ggi~EiV~d--------g~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~-r~~m~~~ar~~ak~fs~~~~a~~ 520 (774)
+++|+..+||..+.|.+ ..+|+++.+.|+++++.+|.+.+.-.+.++. ++.+..++.. .+|+|+..++.
T Consensus 393 tvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~ 470 (487)
T COG0297 393 TLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKE 470 (487)
T ss_pred CcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHH
Confidence 99999999999999975 4689999999999999999988763222555 6666655554 67999999999
Q ss_pred HHHHHHHHhcCCC
Q 004092 521 YAMLLENVLKLPS 533 (774)
Q Consensus 521 y~~L~e~ll~~~~ 533 (774)
|.++|+.+++.+-
T Consensus 471 y~~lY~~~~~~~~ 483 (487)
T COG0297 471 YVELYKPLLSKPF 483 (487)
T ss_pred HHHHHHHHhcccc
Confidence 9999999987543
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-19 Score=200.03 Aligned_cols=271 Identities=16% Similarity=0.120 Sum_probs=176.8
Q ss_pred HHHHhhhcCccEEEEcCCchhH----HHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEE
Q 004092 207 KASFVNWLNYDGILVNSLEAKV----VISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVV 282 (774)
Q Consensus 207 l~~~i~~~~~DIIhvhs~~~~~----~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv 282 (774)
+.++++..+||+||++++.... .+..+......++|++.++++.... ...+.. ..++.+.
T Consensus 92 l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~--~~~w~~--------------~~~d~~~ 155 (382)
T PLN02605 92 VAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTC--HPTWFH--------------KGVTRCF 155 (382)
T ss_pred HHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCc--Cccccc--------------CCCCEEE
Confidence 4456777899999998866321 1222211123468988777642101 111111 2344444
Q ss_pred ccCCcc--hhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHH
Q 004092 283 FPDYVL--PMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRAL 360 (774)
Q Consensus 283 ~ps~~~--~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~ 360 (774)
+++... .+...+++.+++.+++ +|++...... ...+..+|+++|++++.++|+++| +.... |++..+++++
T Consensus 156 ~~s~~~~~~l~~~g~~~~ki~v~g-~~v~~~f~~~--~~~~~~~r~~~gl~~~~~~il~~G-g~~g~---~~~~~li~~l 228 (382)
T PLN02605 156 CPSEEVAKRALKRGLEPSQIRVYG-LPIRPSFARA--VRPKDELRRELGMDEDLPAVLLMG-GGEGM---GPLEETARAL 228 (382)
T ss_pred ECCHHHHHHHHHcCCCHHHEEEEC-cccCHhhccC--CCCHHHHHHHcCCCCCCcEEEEEC-CCccc---ccHHHHHHHH
Confidence 444332 2223356677888875 6776521111 123567899999999999999999 43333 8898889998
Q ss_pred HHchh----hcccCCCCCCCeE-EEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCc
Q 004092 361 LPLFS----EVSVENESNSPIK-VMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEE 435 (774)
Q Consensus 361 ~~L~~----~~p~~~~~~~~v~-LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~ 435 (774)
..+.. ..++ .+ ++++|.. . .+.+.+++. .... +|.++|+++++.++|++||++|.++
T Consensus 229 ~~~~~~~~~~~~~-------~~~~vi~G~~-~-~~~~~L~~~----~~~~-~v~~~G~~~~~~~l~~aaDv~V~~~---- 290 (382)
T PLN02605 229 GDSLYDKNLGKPI-------GQVVVICGRN-K-KLQSKLESR----DWKI-PVKVRGFVTNMEEWMGACDCIITKA---- 290 (382)
T ss_pred HHhhccccccCCC-------ceEEEEECCC-H-HHHHHHHhh----cccC-CeEEEeccccHHHHHHhCCEEEECC----
Confidence 76531 1233 55 4555522 1 122333332 2334 6999999999999999999999865
Q ss_pred CCccHHHHHHHHcCCCEEEcCC------cccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Q 004092 436 QTFPEILVKALCFRKPIIAPDL------SNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV 509 (774)
Q Consensus 436 qGfp~~llEAMA~G~PVIatd~------ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a 509 (774)
.|++++||||||+|||+++. ++.. .+.++..|+++ .|+++++++|.+++++. ++.+++|++++++.+
T Consensus 291 --g~~ti~EAma~g~PvI~~~~~pgqe~gn~~-~i~~~g~g~~~--~~~~~la~~i~~ll~~~--~~~~~~m~~~~~~~~ 363 (382)
T PLN02605 291 --GPGTIAEALIRGLPIILNGYIPGQEEGNVP-YVVDNGFGAFS--ESPKEIARIVAEWFGDK--SDELEAMSENALKLA 363 (382)
T ss_pred --CcchHHHHHHcCCCEEEecCCCccchhhHH-HHHhCCceeec--CCHHHHHHHHHHHHcCC--HHHHHHHHHHHHHhc
Confidence 37899999999999999984 4443 34444457654 69999999999999751 567778999999998
Q ss_pred HhcCHHHHHHHHHHHH
Q 004092 510 KNLMALETIEGYAMLL 525 (774)
Q Consensus 510 k~fs~~~~a~~y~~L~ 525 (774)
+..+.+.+++...++.
T Consensus 364 ~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 364 RPEAVFDIVHDLHELV 379 (382)
T ss_pred CCchHHHHHHHHHHHh
Confidence 8888888887766553
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-19 Score=213.82 Aligned_cols=288 Identities=12% Similarity=0.118 Sum_probs=195.4
Q ss_pred CccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCc----hhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc---
Q 004092 215 NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEG----TLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV--- 287 (774)
Q Consensus 215 ~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~----~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~--- 287 (774)
.=|+|.+|.... ..+..++.+.....++.+.+|.. .++..+.. ...++. ....++.++|.+..
T Consensus 147 ~~d~vWvhDYhL-~llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~-----r~~il~----gll~aDligF~t~~y~r 216 (797)
T PLN03063 147 EGDVVWCHDYHL-MFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPS-----RSELLR----AVLTADLIGFHTYDFAR 216 (797)
T ss_pred CCCEEEEecchh-hhHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCC-----HHHHHH----HHhcCCEEEeCCHHHHH
Confidence 348999999888 47777777777888999999961 11111100 001110 11112222222111
Q ss_pred ---------------chhhcccCCCCCEEEeCCCCCCcccccccCchh--h---HHHHHHhCCCCCCEEEEEEecccccc
Q 004092 288 ---------------LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLY--N---DTVRVKMGFKPDDLVIAIVGTQFMYR 347 (774)
Q Consensus 288 ---------------~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~--k---~~lR~~lgl~~~~~vIl~vGsrl~~~ 347 (774)
...+...-...++.++| +|+|...+....... + ..+++.++ ++++|+++| |+.+.
T Consensus 217 ~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP-~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~lIl~Vg-RLd~~ 291 (797)
T PLN03063 217 HFLSACTRILGVEGTHEGVVDQGKVTRVAVFP-IGIDPERFINTCELPEVKQHMKELKRFFA---GRKVILGVD-RLDMI 291 (797)
T ss_pred HHHHHHHHHhCccccCCceEECCeEEEEEEEe-cccCHHHHHHHhcChhHHHHHHHHHHhcC---CCeEEEEec-ccccc
Confidence 00011111124577888 588875554322211 1 23344433 567999999 99999
Q ss_pred cccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCC--chHHHHHHHHHHcC--CCC--c-----cEEEcc-Cc-
Q 004092 348 GLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTS--NYSVVIEAIAHNLH--YPL--G-----VVKHMA-AE- 414 (774)
Q Consensus 348 KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e--~Y~~~L~~la~~lg--L~~--~-----~V~flG-~~- 414 (774)
||+..+++|+..+.+++|+ ...++.|+.++++.+. ...+.+++.++++. +.. + .|.+++ .+
T Consensus 292 ---KGi~~lL~Afe~lL~~~P~---~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~ 365 (797)
T PLN03063 292 ---KGIPQKYLAFEKFLEENPE---WRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVD 365 (797)
T ss_pred ---cCHHHHHHHHHHHHHhCcc---ccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCC
Confidence 9999999999999988887 1112556655544321 22234555555442 211 0 133333 33
Q ss_pred -ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCC----EEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHH
Q 004092 415 -GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKP----IIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVI 489 (774)
Q Consensus 415 -~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~P----VIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll 489 (774)
+++..+|++||+||+||..| ||+++++||||||+| +|+|+.+|..+.+ +.+|++++|.|++++|++|.+++
T Consensus 366 ~~el~aly~~ADvfvvtSlrE--GmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL 441 (797)
T PLN03063 366 FNYLCALYAITDVMLVTSLRD--GMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEAL 441 (797)
T ss_pred HHHHHHHHHhCCEEEeCcccc--ccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHH
Confidence 78999999999999999999 999999999999999 9999999999876 44699999999999999999999
Q ss_pred H-cCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 490 T-NGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 490 ~-d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
+ + ++++++..+.++++++++++...++.+.+.++++..
T Consensus 442 ~m~---~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 442 NMS---DEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred hCC---HHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 9 5 577778888899999999999999999998887754
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5e-18 Score=204.23 Aligned_cols=284 Identities=9% Similarity=0.080 Sum_probs=191.1
Q ss_pred CccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCc----hhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc---
Q 004092 215 NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEG----TLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV--- 287 (774)
Q Consensus 215 ~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~----~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~--- 287 (774)
.-|+|.+|..... .+..++.++....++-+.+|-. .++..+. ....++. ....++.++|....
T Consensus 133 ~~d~vwvhDYhl~-l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp-----~~~~ll~----~ll~~Dligf~t~~~~r 202 (726)
T PRK14501 133 PGDVVWVHDYQLM-LLPAMLRERLPDARIGFFLHIPFPSFEVFRLLP-----WREEILE----GLLGADLIGFHTYDYVR 202 (726)
T ss_pred CCCEEEEeCchhh-hHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCC-----ChHHHHH----HHhcCCeEEeCCHHHHH
Confidence 4589999999884 7777776667778999999961 1111000 0011110 11112222222111
Q ss_pred ----------------chhhcccCCCCCEEEeCCCCCCcccccccCchh-----hHHHHHHhCCCCCCEEEEEEeccccc
Q 004092 288 ----------------LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLY-----NDTVRVKMGFKPDDLVIAIVGTQFMY 346 (774)
Q Consensus 288 ----------------~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~-----k~~lR~~lgl~~~~~vIl~vGsrl~~ 346 (774)
....+.+ ...++.++| +|+|...+....... .+.+|+.+ +++++|+++| |+.+
T Consensus 203 ~Fl~~~~~~l~~~~~~~~~~~~g-r~~~v~v~p-~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~~il~Vg-Rl~~ 276 (726)
T PRK14501 203 HFLSSVLRVLGYETELGEIRLGG-RIVRVDAFP-MGIDYDKFHNSAQDPEVQEEIRRLRQDL---RGRKIILSID-RLDY 276 (726)
T ss_pred HHHHHHHHHcCCccCCCeEEECC-EEEEEEEEE-CeEcHHHHHHHhcCchHHHHHHHHHHHc---CCCEEEEEec-Cccc
Confidence 0001111 113477888 589886654332211 12234442 4667999999 9999
Q ss_pred ccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCC---C---chHHHHHHHHHHcC-------CCCccEEEccC
Q 004092 347 RGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDST---S---NYSVVIEAIAHNLH-------YPLGVVKHMAA 413 (774)
Q Consensus 347 ~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~---e---~Y~~~L~~la~~lg-------L~~~~V~flG~ 413 (774)
. ||+..+++|+..+.+++|+ ...+++|+++|++.+ + ++...+++++.+.+ ... .+.+.|.
T Consensus 277 ~---Kgi~~~l~A~~~ll~~~p~---~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~p-v~~~~~~ 349 (726)
T PRK14501 277 T---KGIPRRLLAFERFLEKNPE---WRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTP-IHYFYRS 349 (726)
T ss_pred c---cCHHHHHHHHHHHHHhCcc---ccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcce-EEEEeCC
Confidence 9 9999999999999888885 122378999983322 2 33444555544332 112 3456665
Q ss_pred c--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHc-----CCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHH
Q 004092 414 E--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCF-----RKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIIL 486 (774)
Q Consensus 414 ~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~-----G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~ 486 (774)
. +++..+|++||++|+||..| |||++++||||| |.||++...|++.+++ .|++++|.|++++|++|.
T Consensus 350 ~~~~~l~~ly~~aDv~v~~S~~E--G~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~ 423 (726)
T PRK14501 350 LPFEELVALYRAADVALVTPLRD--GMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAAIK 423 (726)
T ss_pred CCHHHHHHHHHhccEEEeccccc--ccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHHHH
Confidence 4 89999999999999999999 999999999999 5577777778888775 389999999999999999
Q ss_pred HHHHcCCCc-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 487 QVITNGKIS-PFARNIASIGRRSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 487 ~Ll~d~~~~-~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
+++++ + +.+.+..+++++.+++|+|..+++.|.+.|+++..
T Consensus 424 ~~l~~---~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 424 RALEM---PEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred HHHcC---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 99987 5 34455556788889999999999999999988743
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.1e-17 Score=181.08 Aligned_cols=333 Identities=16% Similarity=0.051 Sum_probs=197.8
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCC-cchhhhhhcCccEE-Ec---------------cc-----
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDG-RAHEVWRNIGVPVA-IL---------------QT----- 203 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~-~~~~~~~~~gi~i~-~l---------------~~----- 203 (774)
+..++++....++....--.++..|.+.||.|..+....- ............+. .+ +.
T Consensus 5 ~~~~~~~~~~w~~~~~~~qhl~~~~a~~~~~vl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (373)
T cd04950 5 PDILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEPPGLSRTPQPRGRDWVRVVLRLRAALRRPRRLDPLIPARRRRLL 84 (373)
T ss_pred CeEEEecccCcCCCCCCHHHHHHHHHhCCCeEEEEeCCCccCCCCCCCcccEEeeecccccccCccccCccccchhhhHH
Confidence 3455665667777777778889999999999998876532 10000000000000 00 00
Q ss_pred chhHHHHhh------hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHh
Q 004092 204 GREKASFVN------WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNR 277 (774)
Q Consensus 204 ~~~l~~~i~------~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~ 277 (774)
...+...+. ..+..+++.+.+... .+... ..+.++||.+++...... .. ........+..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~~~~~P~~~-~~~~~----~~~~~~Vyd~~D~~~~~~-----~~-~~~~~~~e~~~~~~ 153 (373)
T cd04950 85 RLLLNALLFWAQLELGFGRPILWYYTPYTL-PVAAL----LQASLVVYDCVDDLSAFP-----GG-PPELLEAERRLLKR 153 (373)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEeCccHH-HHHhh----cCCCeEEEEcccchhccC-----CC-CHHHHHHHHHHHHh
Confidence 011122222 234456556555552 33322 455789999986321110 00 01112344556777
Q ss_pred ccEEEccCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHH
Q 004092 278 ATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALIL 357 (774)
Q Consensus 278 a~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLL 357 (774)
++.++..+..+........ .++.+|| +|+|...|......... .+ . ....++++++|+| ++.+. ++++++.
T Consensus 154 ad~vi~~S~~l~~~~~~~~-~~i~~i~-ngvd~~~f~~~~~~~~~-~~-~-~~~~~~~~i~y~G-~l~~~---~d~~ll~ 224 (373)
T cd04950 154 ADLVFTTSPSLYEAKRRLN-PNVVLVP-NGVDYEHFAAARDPPPP-PA-D-LAALPRPVIGYYG-AIAEW---LDLELLE 224 (373)
T ss_pred CCEEEECCHHHHHHHhhCC-CCEEEcc-cccCHHHhhcccccCCC-hh-H-HhcCCCCEEEEEe-ccccc---cCHHHHH
Confidence 8877766665443333333 6888998 48887544332211100 01 1 1234567999999 66664 7776554
Q ss_pred HHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccC
Q 004092 358 RALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLE 434 (774)
Q Consensus 358 eA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E 434 (774)
+++. ..|+ ++|+|+| |+.... ....... + +|+++|.+ +++..+|+.+|++++|+..+
T Consensus 225 ~la~----~~p~-------~~~vliG~~~~~~~-------~~~~~~~-~-nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~ 284 (373)
T cd04950 225 ALAK----ARPD-------WSFVLIGPVDVSID-------PSALLRL-P-NVHYLGPKPYKELPAYLAGFDVAILPFRLN 284 (373)
T ss_pred HHHH----HCCC-------CEEEEECCCcCccC-------hhHhccC-C-CEEEeCCCCHHHHHHHHHhCCEEecCCccc
Confidence 4433 4566 9999999 622211 1111123 3 69999987 89999999999999998532
Q ss_pred c---CCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHh
Q 004092 435 E---QTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKN 511 (774)
Q Consensus 435 ~---qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~ 511 (774)
+ .++|++++||||||+|||+|+.+.+ +.....+++ .++|+++++++|.+++.+ +...... .++..+++
T Consensus 285 ~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~~~~~~ai~~~l~~---~~~~~~~--~~~~~~~~ 355 (373)
T cd04950 285 ELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDPEEFVAAIEKALLE---DGPARER--RRLRLAAQ 355 (373)
T ss_pred hhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCHHHHHHHHHHHHhc---CCchHHH--HHHHHHHH
Confidence 1 2689999999999999999987644 444433444 456999999999998765 3222211 12235688
Q ss_pred cCHHHHHHHHHHHHHH
Q 004092 512 LMALETIEGYAMLLEN 527 (774)
Q Consensus 512 fs~~~~a~~y~~L~e~ 527 (774)
++|+..++++.+.+++
T Consensus 356 ~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 356 NSWDARAAEMLEALQE 371 (373)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999866654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=177.18 Aligned_cols=334 Identities=13% Similarity=0.112 Sum_probs=195.1
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHc-CCeEEEEEcCC-C-cchhhhhhcCccEE-E--ccc------------chhH
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREI-GYAIQVYSLED-G-RAHEVWRNIGVPVA-I--LQT------------GREK 207 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~-G~eV~V~t~~~-~-~~~~~~~~~gi~i~-~--l~~------------~~~l 207 (774)
||++++++ -..-..+..+.+.|.+. +.++.++..+. . ......+.++++.. . +.. ...+
T Consensus 2 ~i~~~~gt---r~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (365)
T TIGR00236 2 KVSIVLGT---RPEAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPDYDLNIMSPGQTLGEITSNMLEGL 78 (365)
T ss_pred eEEEEEec---CHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHHHH
Confidence 55555553 22233456677778765 55665555432 1 12223334555411 1 111 0234
Q ss_pred HHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHH-HhccEEEccCC
Q 004092 208 ASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVF-NRATVVVFPDY 286 (774)
Q Consensus 208 ~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~-~~a~~vv~ps~ 286 (774)
...++..+||+||+|..........+. ....++|++.+-++....... ....+.. .+... ..++.+..++.
T Consensus 79 ~~~l~~~~pDiv~~~gd~~~~la~a~a-a~~~~ipv~h~~~g~~s~~~~----~~~~~~~---~r~~~~~~ad~~~~~s~ 150 (365)
T TIGR00236 79 EELLLEEKPDIVLVQGDTTTTLAGALA-AFYLQIPVGHVEAGLRTGDRY----SPMPEEI---NRQLTGHIADLHFAPTE 150 (365)
T ss_pred HHHHHHcCCCEEEEeCCchHHHHHHHH-HHHhCCCEEEEeCCCCcCCCC----CCCccHH---HHHHHHHHHHhccCCCH
Confidence 556777999999999765532333333 335679987654431111000 0000000 01111 12233333333
Q ss_pred c--chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccc-cccccccHHHHHHHHHHc
Q 004092 287 V--LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFM-YRGLWLEHALILRALLPL 363 (774)
Q Consensus 287 ~--~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~-~~KgiKg~~lLLeA~~~L 363 (774)
. ......+++.+++.++++..+|..... ........++++++. ++.++++.+.+.. .. |+++.+++|+..+
T Consensus 151 ~~~~~l~~~G~~~~~I~vign~~~d~~~~~-~~~~~~~~~~~~~~~--~~~~vl~~~hr~~~~~---k~~~~ll~a~~~l 224 (365)
T TIGR00236 151 QAKDNLLRENVKADSIFVTGNTVIDALLTN-VEIAYSSPVLSEFGE--DKRYILLTLHRRENVG---EPLENIFKAIREI 224 (365)
T ss_pred HHHHHHHHcCCCcccEEEeCChHHHHHHHH-HhhccchhHHHhcCC--CCCEEEEecCchhhhh---hHHHHHHHHHHHH
Confidence 3 122334666778888885223431111 111113345666662 3346666664543 34 8899999999999
Q ss_pred hhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHH
Q 004092 364 FSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEI 441 (774)
Q Consensus 364 ~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~ 441 (774)
.+++|+ ++++++|++.. .....+.+.++..+ +|.++|.. .++..+++.||+++.+| |..
T Consensus 225 ~~~~~~-------~~~vi~~~~~~----~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~~ad~vv~~S-------g~~ 285 (365)
T TIGR00236 225 VEEFED-------VQIVYPVHLNP----VVREPLHKHLGDSK-RVHLIEPLEYLDFLNLAANSHLILTDS-------GGV 285 (365)
T ss_pred HHHCCC-------CEEEEECCCCh----HHHHHHHHHhCCCC-CEEEECCCChHHHHHHHHhCCEEEECC-------hhH
Confidence 877777 88988874322 11223444456655 79999966 57788999999999887 345
Q ss_pred HHHHHHcCCCEEEc-CCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHH
Q 004092 442 LVKALCFRKPIIAP-DLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEG 520 (774)
Q Consensus 442 llEAMA~G~PVIat-d~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~ 520 (774)
++|||+||+|||++ +.++.++++.++. +++++ .|+++++++|.++++| ++.+++|+++...+.....++++++.
T Consensus 286 ~~EA~a~g~PvI~~~~~~~~~e~~~~g~-~~lv~-~d~~~i~~ai~~ll~~---~~~~~~~~~~~~~~g~~~a~~ri~~~ 360 (365)
T TIGR00236 286 QEEAPSLGKPVLVLRDTTERPETVEAGT-NKLVG-TDKENITKAAKRLLTD---PDEYKKMSNASNPYGDGEASERIVEE 360 (365)
T ss_pred HHHHHHcCCCEEECCCCCCChHHHhcCc-eEEeC-CCHHHHHHHHHHHHhC---hHHHHHhhhcCCCCcCchHHHHHHHH
Confidence 79999999999996 6788888887764 66674 6999999999999999 88888887765333333344444443
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.9e-17 Score=179.40 Aligned_cols=334 Identities=13% Similarity=0.089 Sum_probs=196.0
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCcc-----EEE-----------cccchhHHH
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVP-----VAI-----------LQTGREKAS 209 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~-----i~~-----------l~~~~~l~~ 209 (774)
+|+++.+ ..||--.-.. +++.|++.++++.++...........-..+++ +.. +.....+.+
T Consensus 3 ki~i~~G--gt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 79 (380)
T PRK00025 3 RIAIVAG--EVSGDLLGAG-LIRALKARAPNLEFVGVGGPRMQAAGCESLFDMEELAVMGLVEVLPRLPRLLKIRRRLKR 79 (380)
T ss_pred eEEEEec--CcCHHHHHHH-HHHHHHhcCCCcEEEEEccHHHHhCCCccccCHHHhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 5554444 3555555555 99999999999999886542211110000111 111 112223445
Q ss_pred HhhhcCccEEEEcCCch-hHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc
Q 004092 210 FVNWLNYDGILVNSLEA-KVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL 288 (774)
Q Consensus 210 ~i~~~~~DIIhvhs~~~-~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~ 288 (774)
+++..+||+||++.... ...+.... +..++|+++..|...... .... . ......++.+..++...
T Consensus 80 ~l~~~kPdivi~~~~~~~~~~~a~~a--~~~~ip~i~~~~~~~~~~-~~~~--------~---~~~~~~~d~i~~~~~~~ 145 (380)
T PRK00025 80 RLLAEPPDVFIGIDAPDFNLRLEKKL--RKAGIPTIHYVSPSVWAW-RQGR--------A---FKIAKATDHVLALFPFE 145 (380)
T ss_pred HHHHcCCCEEEEeCCCCCCHHHHHHH--HHCCCCEEEEeCCchhhc-CchH--------H---HHHHHHHhhheeCCccC
Confidence 57778999999986432 11222222 234799988766421110 0000 0 01122233333332221
Q ss_pred hhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEE-EecccccccccccHHHHHHHHHHchhhc
Q 004092 289 PMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAI-VGTQFMYRGLWLEHALILRALLPLFSEV 367 (774)
Q Consensus 289 ~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~-vGsrl~~~KgiKg~~lLLeA~~~L~~~~ 367 (774)
...+.... .++.++ |+++... ......+...+++++++++.++++. .|++....+ +.++.+++|+..+.+++
T Consensus 146 ~~~~~~~g-~~~~~~-G~p~~~~---~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~--~~~~~l~~a~~~l~~~~ 218 (380)
T PRK00025 146 AAFYDKLG-VPVTFV-GHPLADA---IPLLPDRAAARARLGLDPDARVLALLPGSRGQEIK--RLLPPFLKAAQLLQQRY 218 (380)
T ss_pred HHHHHhcC-CCeEEE-CcCHHHh---cccccChHHHHHHcCCCCCCCEEEEECCCCHHHHH--HHHHHHHHHHHHHHHhC
Confidence 11111111 124443 3444321 1111124567788999877766554 454554420 33678899999998777
Q ss_pred ccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHc-CCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHH
Q 004092 368 SVENESNSPIKVMILSGDSTSNYSVVIEAIAHNL-HYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKAL 446 (774)
Q Consensus 368 p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~l-gL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAM 446 (774)
|+ ++++++||.. .+.+.+++.++++ ++. +.+.. +++..+|++||++|.+| |.+.+|||
T Consensus 219 ~~-------~~~ii~~~~~--~~~~~~~~~~~~~~~~~---v~~~~--~~~~~~~~~aDl~v~~s-------G~~~lEa~ 277 (380)
T PRK00025 219 PD-------LRFVLPLVNP--KRREQIEEALAEYAGLE---VTLLD--GQKREAMAAADAALAAS-------GTVTLELA 277 (380)
T ss_pred CC-------eEEEEecCCh--hhHHHHHHHHhhcCCCC---eEEEc--ccHHHHHHhCCEEEECc-------cHHHHHHH
Confidence 77 8999998521 1235677777765 443 44443 58999999999999987 56777999
Q ss_pred HcCCCEEEc-----------------CCcccccccccCc--cEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 004092 447 CFRKPIIAP-----------------DLSNIRKYVDDRV--NGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRR 507 (774)
Q Consensus 447 A~G~PVIat-----------------d~ggi~EiV~dg~--~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~ 507 (774)
+||+|||++ +.+++++++.++. .+++.+..|++++++++.++++| ++.+++|++++.+
T Consensus 278 a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~ 354 (380)
T PRK00025 278 LLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLAD---GARRQALLEGFTE 354 (380)
T ss_pred HhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHH
Confidence 999999987 4556677776653 45777778999999999999999 9999999998866
Q ss_pred HHHhcCHHHHHHHHHHHHHHH
Q 004092 508 SVKNLMALETIEGYAMLLENV 528 (774)
Q Consensus 508 ~ak~fs~~~~a~~y~~L~e~l 528 (774)
..+.. -...+++..+++.+.
T Consensus 355 ~~~~~-~~~a~~~~~~~i~~~ 374 (380)
T PRK00025 355 LHQQL-RCGADERAAQAVLEL 374 (380)
T ss_pred HHHHh-CCCHHHHHHHHHHHH
Confidence 66544 222344444444443
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.5e-15 Score=156.58 Aligned_cols=176 Identities=24% Similarity=0.351 Sum_probs=152.1
Q ss_pred EEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccC
Q 004092 335 LVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAA 413 (774)
Q Consensus 335 ~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~ 413 (774)
..++++| ++.+. |+++.+++|+..+....++ +.++++| ++.. .+.+...+.+++..+ +|.|+|.
T Consensus 200 ~~i~~~g-~~~~~---k~~~~~i~~~~~~~~~~~~-------~~~~~~g~~~~~---~~~~~~~~~~~~~~~-~v~~~g~ 264 (381)
T COG0438 200 FVVLYVG-RLDPE---KGLDLLIEAAAKLKKRGPD-------IKLVIVGDGPER---REELEKLAKKLGLED-NVKFLGY 264 (381)
T ss_pred eEEEEee-ccChh---cCHHHHHHHHHHhhhhcCC-------eEEEEEcCCCcc---HHHHHHHHHHhCCCC-cEEEecc
Confidence 6999999 78887 9999999999999988766 8999999 6543 245566788777766 7999998
Q ss_pred cc--cHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHc
Q 004092 414 EG--DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITN 491 (774)
Q Consensus 414 ~~--dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d 491 (774)
.+ ++..+++.||++++||..| ++|++++|||++|+|||+++.++..+++.++.+|++++..+++++++++..++++
T Consensus 265 ~~~~~~~~~~~~~~~~v~ps~~e--~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~ 342 (381)
T COG0438 265 VPDEELAELLASADVFVLPSLSE--GFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLED 342 (381)
T ss_pred cCHHHHHHHHHhCCEEEeccccc--cchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcC
Confidence 74 7888999999999999887 8999999999999999999999999999988778888777899999999999999
Q ss_pred CCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHhc
Q 004092 492 GKISPFARNIASIGRRSV-KNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 492 ~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e~ll~ 530 (774)
++.++.+.+.+++.+ +.|+|+.+++.+.+++.....
T Consensus 343 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 343 ---PELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred ---HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 777888887666666 689999999999999987653
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-15 Score=173.57 Aligned_cols=207 Identities=8% Similarity=0.018 Sum_probs=163.4
Q ss_pred EEEeCCCCCCcccccccCchh-----hHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCC
Q 004092 300 YYVIPGSPAKAWEADTNMDLY-----NDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESN 374 (774)
Q Consensus 300 i~vIpg~gvd~~~~~~~~~~~-----k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~ 374 (774)
+.++| +|+|+..+....... ...+|++++ ++.+|+.++ |+.+. ||+...++|+..+.+++|+ -.
T Consensus 250 v~~~P-iGID~~~f~~~~~~~~~~~~~~~lr~~~~---~~kiIl~VD-RLDy~---KGI~~kl~Afe~~L~~~Pe---~~ 318 (487)
T TIGR02398 250 LGAHP-VGTDPERIRSALAAASIREMMERIRSELA---GVKLILSAE-RVDYT---KGILEKLNAYERLLERRPE---LL 318 (487)
T ss_pred EEEEE-CEecHHHHHHHhcCchHHHHHHHHHHHcC---CceEEEEec-ccccc---cCHHHHHHHHHHHHHhCcc---cc
Confidence 56777 688886654332211 345777777 567999999 99999 9999999999999999996 33
Q ss_pred CCeEEEEEeCCCC------CchHHHHHHHHHHc-------CCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCcc
Q 004092 375 SPIKVMILSGDST------SNYSVVIEAIAHNL-------HYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFP 439 (774)
Q Consensus 375 ~~v~LvIvGG~~~------e~Y~~~L~~la~~l-------gL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp 439 (774)
.+++|+++|.+.+ .++...+++++.+. +... .+.+.+.+ +++..+|+.|||++.+|..| |+.
T Consensus 319 gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~p-v~~~~~~v~~~el~alYr~ADV~lvT~lrD--GmN 395 (487)
T TIGR02398 319 GKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTP-LQFFTRSLPYEEVSAWFAMADVMWITPLRD--GLN 395 (487)
T ss_pred CceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCcc-EEEEcCCCCHHHHHHHHHhCCEEEECcccc--ccC
Confidence 3489999994322 23566677777664 4455 57777865 89999999999999999999 899
Q ss_pred HHHHHHHHcCC----CEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcH-HHHHHHHHHHHHHHhcCH
Q 004092 440 EILVKALCFRK----PIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISP-FARNIASIGRRSVKNLMA 514 (774)
Q Consensus 440 ~~llEAMA~G~----PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~-~r~~m~~~ar~~ak~fs~ 514 (774)
++..|+|||+. |+|.|..+|..+.+. .+++|+|.|++++|++|.+.++. +. ++++.-+..++.+.+++.
T Consensus 396 LVa~Eyva~~~~~~GvLILSefaGaa~~l~---~AllVNP~d~~~~A~ai~~AL~m---~~~Er~~R~~~l~~~v~~~d~ 469 (487)
T TIGR02398 396 LVAKEYVAAQGLLDGVLVLSEFAGAAVELK---GALLTNPYDPVRMDETIYVALAM---PKAEQQARMREMFDAVNYYDV 469 (487)
T ss_pred cchhhHHhhhcCCCCCEEEeccccchhhcC---CCEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHhhCCH
Confidence 99999999998 999999999987774 38999999999999999999998 64 344455566777788999
Q ss_pred HHHHHHHHHHHH
Q 004092 515 LETIEGYAMLLE 526 (774)
Q Consensus 515 ~~~a~~y~~L~e 526 (774)
...++.+..-++
T Consensus 470 ~~W~~~fl~~l~ 481 (487)
T TIGR02398 470 QRWADEFLAAVS 481 (487)
T ss_pred HHHHHHHHHHhh
Confidence 998888775443
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.3e-15 Score=165.01 Aligned_cols=301 Identities=11% Similarity=-0.001 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHc-CCeEEEEEcCCCc---ch--hhhh--hcCccEEE--ccc-----------chhHHHHhhhcCccEEE
Q 004092 162 QMVTIAIALREI-GYAIQVYSLEDGR---AH--EVWR--NIGVPVAI--LQT-----------GREKASFVNWLNYDGIL 220 (774)
Q Consensus 162 ~v~~Lak~L~~~-G~eV~V~t~~~~~---~~--~~~~--~~gi~i~~--l~~-----------~~~l~~~i~~~~~DIIh 220 (774)
.+.-+.+.|++. ++++.++..+..- .. ..+. ..+..+.. ... ...+...+...+||+||
T Consensus 14 ~~~pl~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvV~ 93 (363)
T cd03786 14 KLAPLIRALKKDPGFELVLVVTGQHYDMEMGVTFFEILFIIKPDYDLLLGSDSQSLGAQTAGLLIGLEAVLLEEKPDLVL 93 (363)
T ss_pred HHHHHHHHHhcCCCCCEEEEEeCCCCChhhhHHHHHhhCCCCCCEEEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 466678888876 8999977664311 10 1111 11111211 110 12234446667999999
Q ss_pred EcCCchhHHHHHHHhCCCCCCCEEEEEcCchhh--hhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc--hhhcccCC
Q 004092 221 VNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLA--TRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL--PMMYSAFD 296 (774)
Q Consensus 221 vhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~--~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~--~~i~~~v~ 296 (774)
+|..... .++..+..+..++|++.+.||...+ ....... .. .....++.+..++... .+...+++
T Consensus 94 ~~g~~~~-~~~~~~aa~~~~iPvv~~~~g~~s~~~~~~~~~~----r~------~~~~~ad~~~~~s~~~~~~l~~~G~~ 162 (363)
T cd03786 94 VLGDTNE-TLAAALAAFKLGIPVAHVEAGLRSFDRGMPDEEN----RH------AIDKLSDLHFAPTEEARRNLLQEGEP 162 (363)
T ss_pred EeCCchH-HHHHHHHHHHcCCCEEEEecccccCCCCCCchHH----HH------HHHHHhhhccCCCHHHHHHHHHcCCC
Confidence 9975542 3333333335689998766652111 0000000 00 0112333333333331 22344667
Q ss_pred CCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCC
Q 004092 297 AGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSP 376 (774)
Q Consensus 297 ~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~ 376 (774)
..++.++++..+|...+.. ........++.++++++.++++++| +.......|+++.+++|+..+... +
T Consensus 163 ~~kI~vign~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~vlv~~~-r~~~~~~~k~~~~l~~al~~l~~~--~------- 231 (363)
T cd03786 163 PERIFVVGNTMIDALLRLL-ELAKKELILELLGLLPKKYILVTLH-RVENVDDGEQLEEILEALAELAEE--D------- 231 (363)
T ss_pred cccEEEECchHHHHHHHHH-HhhccchhhhhcccCCCCEEEEEeC-CccccCChHHHHHHHHHHHHHHhc--C-------
Confidence 7888888853344321110 0111122345677777666666666 554311228999999999988643 3
Q ss_pred eEEEEEe-CCCCCchHHHHHHHHHHcCC-CCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCE
Q 004092 377 IKVMILS-GDSTSNYSVVIEAIAHNLHY-PLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPI 452 (774)
Q Consensus 377 v~LvIvG-G~~~e~Y~~~L~~la~~lgL-~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PV 452 (774)
+.+++.| ++.. +.+++.+.++++ .+ +|.|+|.. +++..+|++||++|.|| | + +..|||++|+||
T Consensus 232 ~~vi~~~~~~~~----~~l~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~ad~~v~~S-----g-g-i~~Ea~~~g~Pv 299 (363)
T cd03786 232 VPVVFPNHPRTR----PRIREAGLEFLGHHP-NVLLISPLGYLYFLLLLKNADLVLTDS-----G-G-IQEEASFLGVPV 299 (363)
T ss_pred CEEEEECCCChH----HHHHHHHHhhccCCC-CEEEECCcCHHHHHHHHHcCcEEEEcC-----c-c-HHhhhhhcCCCE
Confidence 6766666 4444 667788887776 44 79999754 78999999999999998 3 3 578999999999
Q ss_pred EEcCC-cccccccccCccEEEEcC-CCHHHHHHHHHHHHHcCCCcHHHHHHH
Q 004092 453 IAPDL-SNIRKYVDDRVNGYLFPK-ENIKALTHIILQVITNGKISPFARNIA 502 (774)
Q Consensus 453 Iatd~-ggi~EiV~dg~~G~Lv~~-~d~e~La~aI~~Ll~d~~~~~~r~~m~ 502 (774)
|+++. +..++.+.+| ..+.. .|+++++++|.+++++ +..+..|.
T Consensus 300 I~~~~~~~~~~~~~~g---~~~~~~~~~~~i~~~i~~ll~~---~~~~~~~~ 345 (363)
T cd03786 300 LNLRDRTERPETVESG---TNVLVGTDPEAILAAIEKLLSD---EFAYSLMS 345 (363)
T ss_pred EeeCCCCccchhhhee---eEEecCCCHHHHHHHHHHHhcC---chhhhcCC
Confidence 99864 4456666654 33333 3799999999999999 77776663
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.9e-14 Score=147.57 Aligned_cols=195 Identities=17% Similarity=0.209 Sum_probs=158.1
Q ss_pred HHHhCC-CCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe---CCCCCchHHHHHHHHHH
Q 004092 325 RVKMGF-KPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS---GDSTSNYSVVIEAIAHN 400 (774)
Q Consensus 325 R~~lgl-~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG---G~~~e~Y~~~L~~la~~ 400 (774)
....+. ..+.+.++++| .+.|+ |++. +++.++....+.|+ ....++++|+|+| +++.+++-..|++++++
T Consensus 259 ks~~~te~~r~~~ll~l~-Q~RPE---KnH~-~Lql~Al~~~~~pl-~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~ 332 (465)
T KOG1387|consen 259 KSKFGTEGERENQLLSLA-QFRPE---KNHK-ILQLFALYLKNEPL-EASVSPIKLIIVGSCRNEEDEERVKSLKDLAEE 332 (465)
T ss_pred HHHhcccCCcceEEEEEe-ecCcc---cccH-HHHHHHHHHhcCch-hhccCCceEEEEeccCChhhHHHHHHHHHHHHh
Confidence 334444 45667899999 99999 8888 56665555555554 2344569999999 45666777889999999
Q ss_pred cCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccc-ccccc---CccEEEEc
Q 004092 401 LHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIR-KYVDD---RVNGYLFP 474 (774)
Q Consensus 401 lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~-EiV~d---g~~G~Lv~ 474 (774)
|++++ +|.|.-.+ +++..+|+.|.+-|..-..| -||+.++|+||+|+-.|+.+.||.. ++|.+ ..+|++.+
T Consensus 333 L~i~~-~v~F~~N~Py~~lv~lL~~a~iGvh~MwNE--HFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~ 409 (465)
T KOG1387|consen 333 LKIPK-HVQFEKNVPYEKLVELLGKATIGVHTMWNE--HFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP 409 (465)
T ss_pred cCCcc-ceEEEecCCHHHHHHHhccceeehhhhhhh--hcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC
Confidence 99999 89998755 89999999999999998888 6999999999999999998888875 66642 35799885
Q ss_pred CCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcCC
Q 004092 475 KENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLP 532 (774)
Q Consensus 475 ~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~~~ 532 (774)
+.++.|++|.+++..+ .+.+..|+++||..+.+|+-.+..+.|...+.+++..+
T Consensus 410 --t~~EYaE~iLkIv~~~--~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e~ 463 (465)
T KOG1387|consen 410 --TDEEYAEAILKIVKLN--YDERNMMRRNARKSLARFGELKFDKDWENPICKLLEEE 463 (465)
T ss_pred --ChHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhccc
Confidence 7889999999999851 45577899999999999999999999999999887654
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.9e-14 Score=153.61 Aligned_cols=286 Identities=11% Similarity=0.049 Sum_probs=180.0
Q ss_pred CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccchhHHHHhhhcCc-cEEEEcCCchhHH-H-H
Q 004092 155 LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNY-DGILVNSLEAKVV-I-S 231 (774)
Q Consensus 155 ~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~~l~~~i~~~~~-DIIhvhs~~~~~~-l-~ 231 (774)
...|+...-.+..+.+.+.|++...+...+.... .+. .....+...+...++ |+||+++|..... + .
T Consensus 13 ~~~a~~ka~~d~~~~~~~~g~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~Dvv~~~~P~~~~~~~~~ 82 (333)
T PRK09814 13 GNSAALKAKNDVTKIAKQLGFEELGIYFYNIKRD-SLS---------ERSKRLDGILASLKPGDIVIFQFPTWNGFEFDR 82 (333)
T ss_pred ccchHHHHHHHHHHHHHHCCCeEeEEEecccccc-hHH---------HHHHHHHHHHhcCCCCCEEEEECCCCchHHHHH
Confidence 3567788888999999999998766543221100 000 001122334555666 9999999876431 1 2
Q ss_pred HHHhC-CCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch--hhcccCCCCCEEEeCCCCC
Q 004092 232 NIMQE-PFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP--MMYSAFDAGNYYVIPGSPA 308 (774)
Q Consensus 232 ~Ll~~-~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~--~i~~~v~~~ki~vIpg~gv 308 (774)
.++.. +..++|+|+++|+.... +.. .. ..........++.++.+++++.... +...++...++.++++..
T Consensus 83 ~~~~~~k~~~~k~i~~ihD~~~~-~~~---~~--~~~~~~~~~~~~~aD~iI~~S~~~~~~l~~~g~~~~~i~~~~~~~- 155 (333)
T PRK09814 83 LFVDKLKKKQVKIIILIHDIEPL-RFD---SN--YYLMKEEIDMLNLADVLIVHSKKMKDRLVEEGLTTDKIIVQGIFD- 155 (333)
T ss_pred HHHHHHHHcCCEEEEEECCcHHH-hcc---cc--chhhHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcCceEeccccc-
Confidence 22211 12379999999973211 111 00 0012233456778898888877632 223445556676665211
Q ss_pred CcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCC
Q 004092 309 KAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDST 387 (774)
Q Consensus 309 d~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~ 387 (774)
.. ..... + ......+.++|+| ++... .. ++. ..++ ++|+|+| |+..
T Consensus 156 ~~---~~~~~------~---~~~~~~~~i~yaG-~l~k~---~~----l~~------~~~~-------~~l~i~G~g~~~ 202 (333)
T PRK09814 156 YL---NDIEL------V---KTPSFQKKINFAG-NLEKS---PF----LKN------WSQG-------IKLTVFGPNPED 202 (333)
T ss_pred cc---ccccc------c---ccccCCceEEEec-Chhhc---hH----HHh------cCCC-------CeEEEECCCccc
Confidence 11 00000 0 0122345899999 77653 21 111 2344 8999999 8754
Q ss_pred CchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCcc-------C--cCCccHHHHHHHHcCCCEEEcC
Q 004092 388 SNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFL-------E--EQTFPEILVKALCFRKPIIAPD 456 (774)
Q Consensus 388 e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~-------E--~qGfp~~llEAMA~G~PVIatd 456 (774)
+ ...+ +|.|+|++ +++..+|+. |+.+.+... + .-++|.++.++||||+|||+++
T Consensus 203 ~-------------~~~~-~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~ 267 (333)
T PRK09814 203 L-------------ENSA-NISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS 267 (333)
T ss_pred c-------------ccCC-CeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC
Confidence 1 2344 79999977 888999988 655443211 1 0158999999999999999999
Q ss_pred CcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhc
Q 004092 457 LSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNL 512 (774)
Q Consensus 457 ~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~f 512 (774)
.+++.++|.++.+|++++ +.++++++|..+ + ++.+++|++++++.++.+
T Consensus 268 ~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~--~---~~~~~~m~~n~~~~~~~~ 316 (333)
T PRK09814 268 KAAIADFIVENGLGFVVD--SLEELPEIIDNI--T---EEEYQEMVENVKKISKLL 316 (333)
T ss_pred CccHHHHHHhCCceEEeC--CHHHHHHHHHhc--C---HHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 788999999885 3 457888999999998654
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4e-14 Score=170.32 Aligned_cols=287 Identities=11% Similarity=0.113 Sum_probs=190.0
Q ss_pred CccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCc----hhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc--
Q 004092 215 NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEG----TLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL-- 288 (774)
Q Consensus 215 ~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~----~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~-- 288 (774)
.=|+|.+|.... ..+..++.+.....++-+.+|-. .++..+.. ...++. ..-.++.+.|.....
T Consensus 231 ~gD~VWVHDYHL-~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~-----r~elL~----glL~aDlIGFqT~~y~r 300 (934)
T PLN03064 231 EGDVVWCHDYHL-MFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPS-----RSELLR----SVLAADLVGFHTYDYAR 300 (934)
T ss_pred CCCEEEEecchh-hHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCc-----HHHHHH----HHhcCCeEEeCCHHHHH
Confidence 348999999888 47777777777788999999961 11111100 011110 111222233322220
Q ss_pred ------------hhhcccCC-CC---CEEEeCCCCCCcccccccCchh-----hHHHHHHhCCCCCCEEEEEEecccccc
Q 004092 289 ------------PMMYSAFD-AG---NYYVIPGSPAKAWEADTNMDLY-----NDTVRVKMGFKPDDLVIAIVGTQFMYR 347 (774)
Q Consensus 289 ------------~~i~~~v~-~~---ki~vIpg~gvd~~~~~~~~~~~-----k~~lR~~lgl~~~~~vIl~vGsrl~~~ 347 (774)
......+. .+ ++.+.| +|||...+....... .+.++++++ ++.+|+.++ |+.+.
T Consensus 301 hFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~P-iGID~~~f~~~~~~~~v~~~~~~lr~~~~---g~kiIlgVD-RLD~~ 375 (934)
T PLN03064 301 HFVSACTRILGLEGTPEGVEDQGRLTRVAAFP-IGIDSDRFIRALETPQVQQHIKELKERFA---GRKVMLGVD-RLDMI 375 (934)
T ss_pred HHHHHHHHHhCccccCCeEEECCEEEEEEEEe-CEEcHHHHHHHhcChhHHHHHHHHHHHhC---CceEEEEee-ccccc
Confidence 00000111 12 244556 788876554332211 335666655 456999999 99998
Q ss_pred cccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-C-----CCCCchHHHHHHHHHHcCCCC-----ccEEEcc---C
Q 004092 348 GLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-G-----DSTSNYSVVIEAIAHNLHYPL-----GVVKHMA---A 413 (774)
Q Consensus 348 KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G-----~~~e~Y~~~L~~la~~lgL~~-----~~V~flG---~ 413 (774)
||+...++|+..+.+++|+ -..++.|+-+. + +...++...+.+++.+.+-.- .-|.++. .
T Consensus 376 ---KGI~~kL~AfE~fL~~~Pe---~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~ 449 (934)
T PLN03064 376 ---KGIPQKILAFEKFLEENPE---WRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD 449 (934)
T ss_pred ---cCHHHHHHHHHHHHHhCcc---ccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCC
Confidence 9999999999999999887 11224555444 2 122223344555554432111 1145443 2
Q ss_pred cccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCC----CEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHH
Q 004092 414 EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRK----PIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVI 489 (774)
Q Consensus 414 ~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~----PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll 489 (774)
.+++..+|+.||++|+||..| |++++..|||+|+. ++|.|...|..+.+ +..+++|+|.|++++|++|.+++
T Consensus 450 ~eeL~AlY~~ADV~lvTslrD--GmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL 525 (934)
T PLN03064 450 FHALCALYAVTDVALVTSLRD--GMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVAASIAQAL 525 (934)
T ss_pred HHHHHHHHHhCCEEEeCcccc--ccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--CCceEEECCCCHHHHHHHHHHHH
Confidence 288999999999999999999 99999999999954 45558999988888 33589999999999999999999
Q ss_pred H-cCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 004092 490 T-NGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVL 529 (774)
Q Consensus 490 ~-d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll 529 (774)
+ + +++++++.+++++++..+++...++.+.+-++.+.
T Consensus 526 ~M~---~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 526 NMP---EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred hCC---HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 9 6 67788888999999999999999999888777653
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.5e-13 Score=138.94 Aligned_cols=343 Identities=14% Similarity=0.128 Sum_probs=206.0
Q ss_pred CCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCC-cchhhhhhcCccEEEcccchh--------------H-
Q 004092 144 KPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDG-RAHEVWRNIGVPVAILQTGRE--------------K- 207 (774)
Q Consensus 144 k~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~-~~~~~~~~~gi~i~~l~~~~~--------------l- 207 (774)
+.-+++|.++...+ -.|-.-|..|++.|++|+++...+. +.......-.|.++.++.... +
T Consensus 13 ~ra~vvVLGDvGRS---PRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~hprI~ih~m~~l~~~~~~p~~~~l~lKvf~ 89 (444)
T KOG2941|consen 13 KRAIVVVLGDVGRS---PRMQYHALSLAKLGFQVDLIGYVESIPLEELLNHPRIRIHGMPNLPFLQGGPRVLFLPLKVFW 89 (444)
T ss_pred ceEEEEEecccCCC---hHHHHHHHHHHHcCCeEEEEEecCCCChHHHhcCCceEEEeCCCCcccCCCchhhhhHHHHHH
Confidence 34467777765443 3566678889999999999988664 444455555555554432210 0
Q ss_pred ------HHHhhhcCccEEEEcCCchhHHHH-HHHhCCCCCCCEEEEEcCch-----------------hhhhHHHhhhhh
Q 004092 208 ------ASFVNWLNYDGILVNSLEAKVVIS-NIMQEPFKSLPLVWTIHEGT-----------------LATRARNYASSG 263 (774)
Q Consensus 208 ------~~~i~~~~~DIIhvhs~~~~~~l~-~Ll~~~~~~ipvI~tiHg~~-----------------l~~~~~k~~~~~ 263 (774)
..+.-...+|+|.++.|.+.+.+. +.+.....+.++|..+|+.. +.+.++++..+.
T Consensus 90 Qfl~Ll~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~E~~fgk~ 169 (444)
T KOG2941|consen 90 QFLSLLWALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWLEKYFGKL 169 (444)
T ss_pred HHHHHHHHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHHHHHhhcc
Confidence 001112789999999987644333 23333467899999999711 113344444444
Q ss_pred hhHHHHHHHHHHH-hccE-------EEc--cCCc-c-----hhhcccCCCCCEEEeCCCCCCcccccccCchh----hHH
Q 004092 264 QLELLNDWKKVFN-RATV-------VVF--PDYV-L-----PMMYSAFDAGNYYVIPGSPAKAWEADTNMDLY----NDT 323 (774)
Q Consensus 264 ~~~li~~~~~~~~-~a~~-------vv~--ps~~-~-----~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~----k~~ 323 (774)
++.-++..+.+.. ..+. +.+ |.+. . +..+..+.. |...|..-.... ...
T Consensus 170 a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps~~~~l~~~H~lf~~l~~-----------d~~~f~ar~~q~~~~~~ta 238 (444)
T KOG2941|consen 170 ADYNLCVTKAMREDLIQNWGINRAKVLYDRPPSKPTPLDEQHELFMKLAG-----------DHSPFRAREPQDKALERTA 238 (444)
T ss_pred cccchhhHHHHHHHHHHhcCCceeEEEecCCCCCCCchhHHHHHHhhhcc-----------ccchhhhcccccchhhhhh
Confidence 4332222222111 1110 001 1100 0 000001000 000000000000 011
Q ss_pred HHHHhC-----CCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHH
Q 004092 324 VRVKMG-----FKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAI 397 (774)
Q Consensus 324 lR~~lg-----l~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~l 397 (774)
+-++.. ..++.+.++.......++ .++..|++|+....++..+....-+++-++|.| ||..+.|. +.
T Consensus 239 f~~k~~s~~v~~~~~~pallvsSTswTpD---Edf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlkE~Y~----~~ 311 (444)
T KOG2941|consen 239 FTKKDASGDVQLLPERPALLVSSTSWTPD---EDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLKEKYS----QE 311 (444)
T ss_pred HhhhcccchhhhccCCCeEEEecCCCCCc---ccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchhHHHH----HH
Confidence 111111 122333444444478888 999999999985433221111222338888889 99995555 88
Q ss_pred HHHcCCCCccEEEc-cC--cccHHHHHHHcCEEEEc--CccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEE
Q 004092 398 AHNLHYPLGVVKHM-AA--EGDVDSVLNTADVVIYG--SFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYL 472 (774)
Q Consensus 398 a~~lgL~~~~V~fl-G~--~~dl~~~l~aaDI~V~P--S~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~L 472 (774)
++++++++ |.+. .+ .+|.+.+++.||+.|.- |..- --.|++++..+.||+||+|-+...+.|+|.+++||++
T Consensus 312 I~~~~~~~--v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSG-LDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlv 388 (444)
T KOG2941|consen 312 IHEKNLQH--VQVCTPWLEAEDYPKLLASADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLV 388 (444)
T ss_pred HHHhcccc--eeeeecccccccchhHhhccccceEeeecCcc-cCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceE
Confidence 88888887 4444 33 38999999999987653 3221 1489999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHHHH----cCCCcHHHHHHHHHHHHHHHhcCHHH
Q 004092 473 FPKENIKALTHIILQVIT----NGKISPFARNIASIGRRSVKNLMALE 516 (774)
Q Consensus 473 v~~~d~e~La~aI~~Ll~----d~~~~~~r~~m~~~ar~~ak~fs~~~ 516 (774)
|. |.++||+.+..+++ + .....++.+++++.. +..|+.
T Consensus 389 F~--Ds~eLa~ql~~lf~~fp~~---a~~l~~lkkn~~e~~-e~RW~~ 430 (444)
T KOG2941|consen 389 FE--DSEELAEQLQMLFKNFPDN---ADELNQLKKNLREEQ-ELRWDE 430 (444)
T ss_pred ec--cHHHHHHHHHHHHhcCCCC---HHHHHHHHHhhHHHH-hhhHHH
Confidence 97 89999999999998 6 677888888888774 344443
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.3e-15 Score=140.49 Aligned_cols=131 Identities=23% Similarity=0.325 Sum_probs=95.4
Q ss_pred EEEEEEecccccccccccHHHHHH-HHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEcc
Q 004092 335 LVIAIVGTQFMYRGLWLEHALILR-ALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMA 412 (774)
Q Consensus 335 ~vIl~vGsrl~~~KgiKg~~lLLe-A~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG 412 (774)
++++++| +..+. |+++.+++ |+.++.+++|+ ++|+|+| ++. .++++ ..+ +|.++|
T Consensus 3 ~~i~~~g-~~~~~---k~~~~li~~~~~~l~~~~p~-------~~l~i~G~~~~------~l~~~-----~~~-~v~~~g 59 (135)
T PF13692_consen 3 LYIGYLG-RIRPD---KGLEELIEAALERLKEKHPD-------IELIIIGNGPD------ELKRL-----RRP-NVRFHG 59 (135)
T ss_dssp EEEE--S--SSGG---GTHHHHHH-HHHHHHHHSTT-------EEEEEECESS-------HHCCH-----HHC-TEEEE-
T ss_pred ccccccc-ccccc---ccccchhhhHHHHHHHHCcC-------EEEEEEeCCHH------HHHHh-----cCC-CEEEcC
Confidence 5778888 66666 99999999 99999999998 9999999 554 13333 123 799999
Q ss_pred CcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHc
Q 004092 413 AEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITN 491 (774)
Q Consensus 413 ~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d 491 (774)
+++++.++++.||+++.|+...+ ++|.+++|||++|+|||+++. +..+++.....|+++ .+|+++++++|.++++|
T Consensus 60 ~~~e~~~~l~~~dv~l~p~~~~~-~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 60 FVEELPEILAAADVGLIPSRFNE-GFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLLND 135 (135)
T ss_dssp S-HHHHHHHHC-SEEEE-BSS-S-CC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHhCCEEEEEeeCCC-cCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHhcC
Confidence 99999999999999999996443 899999999999999999998 566666545567777 78999999999999876
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.6e-14 Score=160.98 Aligned_cols=166 Identities=16% Similarity=0.158 Sum_probs=146.8
Q ss_pred EEEEEe-cccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCC---------
Q 004092 336 VIAIVG-TQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYP--------- 404 (774)
Q Consensus 336 vIl~vG-srl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~--------- 404 (774)
.+++++ -|+ ++ |.++.+|+|+..+.+++|+ ++|.+.| |.. +.+...++++++++++.
T Consensus 321 ~~I~v~idrL-~e---k~~~~~I~av~~~~~~~p~-------~~L~~~gy~~~-~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 321 TEIGFWIDGL-SD---EELQQILQQLLQYILKNPD-------YELKILTYNND-NDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred eEEEEEcCCC-Ch---HHHHHHHHHHHHHHhhCCC-------eEEEEEEecCc-hhHHHHHHHHHHHHHhhhchhhhccc
Confidence 344444 145 66 9999999999999999999 9999999 743 45567888888888777
Q ss_pred --------------------CccEEEccCcc--cHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccc
Q 004092 405 --------------------LGVVKHMAAEG--DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRK 462 (774)
Q Consensus 405 --------------------~~~V~flG~~~--dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~E 462 (774)
+ +|.|.|+.. ++.+.|..+.++|.+|..| ||+ +++||+++|+|+| .-|..+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~-~v~f~gy~~e~dl~~~~~~arl~id~s~~e--g~~-~~ieAiS~GiPqI---nyg~~~ 461 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKE-RIAFTTLTNEEDLISALDKLRLIIDLSKEP--DLY-TQISGISAGIPQI---NKVETD 461 (519)
T ss_pred cchhhhhhhcccchhhccccc-EEEEEecCCHHHHHHHHhhheEEEECCCCC--ChH-HHHHHHHcCCCee---ecCCce
Confidence 6 899999886 9999999999999999998 899 9999999999999 445689
Q ss_pred ccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004092 463 YVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLL 525 (774)
Q Consensus 463 iV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~ 525 (774)
+|.|++||+++ +|.++|+++|..+|.+ ++.++++...+++.+++||.+++.++|.+++
T Consensus 462 ~V~d~~NG~li--~d~~~l~~al~~~L~~---~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 462 YVEHNKNGYII--DDISELLKALDYYLDN---LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred eeEcCCCcEEe--CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 99999999999 6999999999999999 9999999999999999999999999998763
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.4e-13 Score=148.32 Aligned_cols=320 Identities=13% Similarity=0.073 Sum_probs=183.3
Q ss_pred CCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh-----hhhcCccEEE----cc-------cchhH
Q 004092 144 KPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV-----WRNIGVPVAI----LQ-------TGREK 207 (774)
Q Consensus 144 k~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~-----~~~~gi~i~~----l~-------~~~~l 207 (774)
-|+|.++.+ ..||--.-. .++++|++.++++.++....+..... +....+++.. +. ...+.
T Consensus 5 ~~ki~i~aG--gtsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~v~G~~~~l~~~~~~~~~~~~~ 81 (385)
T TIGR00215 5 IPTIALVAG--EASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAAEGCEVLYSMEELSVMGLREVLGRLGRLLKIRKEV 81 (385)
T ss_pred CCeEEEEeC--CccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHhCcCccccChHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 356655544 355554445 99999999999999888664221110 0000011111 11 11233
Q ss_pred HHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhH----HHhhhhhhhHHHHHHHHHHHhccEEEc
Q 004092 208 ASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRA----RNYASSGQLELLNDWKKVFNRATVVVF 283 (774)
Q Consensus 208 ~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~----~k~~~~~~~~li~~~~~~~~~a~~vv~ 283 (774)
.+.++..+||+|++............. .+..++|+++.+. +..+.. .+...+..+.+++.+..
T Consensus 82 ~~~l~~~kPd~vi~~g~~~~~~~~a~a-a~~~gip~v~~i~--P~~waw~~~~~r~l~~~~d~v~~~~~~---------- 148 (385)
T TIGR00215 82 VQLAKQAKPDLLVGIDAPDFNLTKELK-KKDPGIKIIYYIS--PQVWAWRKWRAKKIEKATDFLLAILPF---------- 148 (385)
T ss_pred HHHHHhcCCCEEEEeCCCCccHHHHHH-HhhCCCCEEEEeC--CcHhhcCcchHHHHHHHHhHhhccCCC----------
Confidence 445677899999998854322222223 3456899986553 221111 12222233333222211
Q ss_pred cCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEE-eccccc-ccccccHHHHHHHHH
Q 004092 284 PDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIV-GTQFMY-RGLWLEHALILRALL 361 (774)
Q Consensus 284 ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~v-Gsrl~~-~KgiKg~~lLLeA~~ 361 (774)
. ...+... ..+..++. +|+.... ... ...+...|++++++++.++|+++ |||..+ + |++..+++|+.
T Consensus 149 --e--~~~~~~~-g~~~~~vG-nPv~~~~-~~~-~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~---k~~~~ll~a~~ 217 (385)
T TIGR00215 149 --E--KAFYQKK-NVPCRFVG-HPLLDAI-PLY-KPDRKSAREKLGIDHNGETLALLPGSRGSEVE---KLFPLFLKAAQ 217 (385)
T ss_pred --c--HHHHHhc-CCCEEEEC-Cchhhhc-ccc-CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHH---HhHHHHHHHHH
Confidence 0 0001110 12333433 3542211 111 12245568889998887777655 567766 6 88999999999
Q ss_pred HchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHH
Q 004092 362 PLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEI 441 (774)
Q Consensus 362 ~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~ 441 (774)
.+.+.+|+ +++++.+++.. ..+.++++.+.++... .|.+++. ++..+|++||++|++| |.+
T Consensus 218 ~l~~~~p~-------~~~vi~~~~~~--~~~~~~~~~~~~~~~~-~v~~~~~--~~~~~l~aADl~V~~S-------Gt~ 278 (385)
T TIGR00215 218 LLEQQEPD-------LRRVLPVVNFK--RRLQFEQIKAEYGPDL-QLHLIDG--DARKAMFAADAALLAS-------GTA 278 (385)
T ss_pred HHHHhCCC-------eEEEEEeCCch--hHHHHHHHHHHhCCCC-cEEEECc--hHHHHHHhCCEEeecC-------CHH
Confidence 99888887 88887763221 1255667777666655 6766643 6778999999999999 345
Q ss_pred HHHHHHcCCCEEEc----CCc-------------ccccccccCccEE--EEcCCCHHHHHHHHHHHHHcCCCc----HHH
Q 004092 442 LVKALCFRKPIIAP----DLS-------------NIRKYVDDRVNGY--LFPKENIKALTHIILQVITNGKIS----PFA 498 (774)
Q Consensus 442 llEAMA~G~PVIat----d~g-------------gi~EiV~dg~~G~--Lv~~~d~e~La~aI~~Ll~d~~~~----~~r 498 (774)
.+|||+||+|+|.. ..+ +.+.++.+..-.. +-..-+++.+++++.++++| + +.+
T Consensus 279 tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~---~~~~~~~~ 355 (385)
T TIGR00215 279 ALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLEN---GLKAYKEM 355 (385)
T ss_pred HHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcC---CcccHHHH
Confidence 56999999998886 221 1222333322111 11234689999999999999 8 778
Q ss_pred HHHHHHHHHHHHhc
Q 004092 499 RNIASIGRRSVKNL 512 (774)
Q Consensus 499 ~~m~~~ar~~ak~f 512 (774)
+++.+.-.+..+..
T Consensus 356 ~~~~~~~~~~~~~l 369 (385)
T TIGR00215 356 HRERQFFEELRQRI 369 (385)
T ss_pred HHHHHHHHHHHHHh
Confidence 77766655554444
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.6e-11 Score=133.59 Aligned_cols=318 Identities=16% Similarity=0.189 Sum_probs=186.3
Q ss_pred EecCCCCChHHHHHHHHHHHHHHcCCe-EEEEEcCCCcchhhhhhcCccEEEccc---------------------chhH
Q 004092 150 VFPDLLIDPQQLQMVTIAIALREIGYA-IQVYSLEDGRAHEVWRNIGVPVAILQT---------------------GREK 207 (774)
Q Consensus 150 V~~~L~~GG~e~~v~~Lak~L~~~G~e-V~V~t~~~~~~~~~~~~~gi~i~~l~~---------------------~~~l 207 (774)
++.....||--.....+++.|.++|++ |.++....+-........++.++.++. ..+.
T Consensus 4 vl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~a 83 (357)
T COG0707 4 VLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQYGIEFELIPSGGLRRKGSLKLLKAPFKLLKGVLQA 83 (357)
T ss_pred EEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeeccccCceEEEEecccccccCcHHHHHHHHHHHHHHHHH
Confidence 334445788888899999999999996 555433332222222222333333221 1223
Q ss_pred HHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc
Q 004092 208 ASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV 287 (774)
Q Consensus 208 ~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~ 287 (774)
..+++..+||+|+....... ....+. ....++|++.+-.+.. .....++..+..+.+...+..
T Consensus 84 ~~il~~~kPd~vig~Ggyvs-~P~~~A-a~~~~iPv~ihEqn~~-~G~ank~~~~~a~~V~~~f~~-------------- 146 (357)
T COG0707 84 RKILKKLKPDVVIGTGGYVS-GPVGIA-AKLLGIPVIIHEQNAV-PGLANKILSKFAKKVASAFPK-------------- 146 (357)
T ss_pred HHHHHHcCCCEEEecCCccc-cHHHHH-HHhCCCCEEEEecCCC-cchhHHHhHHhhceeeecccc--------------
Confidence 44577799999999776652 333333 3466799885444211 111122222222222111110
Q ss_pred chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhc
Q 004092 288 LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEV 367 (774)
Q Consensus 288 ~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~ 367 (774)
....++.+++ +..|+|+.....+ ......+.. + ..+.++|+++||...-. .-.+.+.++...+.+
T Consensus 147 ---~~~~~~~~~~-~~tG~Pvr~~~~~----~~~~~~~~~-~-~~~~~~ilV~GGS~Ga~---~ln~~v~~~~~~l~~-- 211 (357)
T COG0707 147 ---LEAGVKPENV-VVTGIPVRPEFEE----LPAAEVRKD-G-RLDKKTILVTGGSQGAK---ALNDLVPEALAKLAN-- 211 (357)
T ss_pred ---ccccCCCCce-EEecCcccHHhhc----cchhhhhhh-c-cCCCcEEEEECCcchhH---HHHHHHHHHHHHhhh--
Confidence 1122233333 3345677652222 111122222 2 22677888888776664 433444444445544
Q ss_pred ccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHH
Q 004092 368 SVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALC 447 (774)
Q Consensus 368 p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA 447 (774)
+ ++++..+|+.. + +.++..-.+++. +...++.+|+..+|++||++|.=+ -++++.|+.+
T Consensus 212 -~-------~~v~~~~G~~~--~-~~~~~~~~~~~~----~~v~~f~~dm~~~~~~ADLvIsRa------Ga~Ti~E~~a 270 (357)
T COG0707 212 -R-------IQVIHQTGKND--L-EELKSAYNELGV----VRVLPFIDDMAALLAAADLVISRA------GALTIAELLA 270 (357)
T ss_pred -C-------eEEEEEcCcch--H-HHHHHHHhhcCc----EEEeeHHhhHHHHHHhccEEEeCC------cccHHHHHHH
Confidence 2 77777776542 1 223333332222 888899999999999999999765 2689999999
Q ss_pred cCCCEEEcCCccc--------ccccccCccEEEEcCCC--HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHH
Q 004092 448 FRKPIIAPDLSNI--------RKYVDDRVNGYLFPKEN--IKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALET 517 (774)
Q Consensus 448 ~G~PVIatd~ggi--------~EiV~dg~~G~Lv~~~d--~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~ 517 (774)
+|+|+|--+.+.. ...+++...|.+++..+ ++.+++.|..++++ ++..++|++++++....-..+++
T Consensus 271 ~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~---~~~l~~m~~~a~~~~~p~aa~~i 347 (357)
T COG0707 271 LGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSN---PEKLKAMAENAKKLGKPDAAERI 347 (357)
T ss_pred hCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCHHHHH
Confidence 9999988665544 23344445577777655 89999999999999 99999999999887765555555
Q ss_pred HHHHHH
Q 004092 518 IEGYAM 523 (774)
Q Consensus 518 a~~y~~ 523 (774)
++....
T Consensus 348 ~~~~~~ 353 (357)
T COG0707 348 ADLLLA 353 (357)
T ss_pred HHHHHH
Confidence 554443
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.7e-10 Score=127.77 Aligned_cols=293 Identities=16% Similarity=0.169 Sum_probs=170.7
Q ss_pred EEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEccc---ch------------------hH
Q 004092 149 LVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQT---GR------------------EK 207 (774)
Q Consensus 149 lV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~---~~------------------~l 207 (774)
+++.....||--.-...+++.|.+.||+|.+++...+-........++++..+.. .+ +.
T Consensus 4 i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (352)
T PRK12446 4 IVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKGVMDA 83 (352)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHHHHHH
Confidence 4445556888888899999999999999999987654433333334455433321 11 12
Q ss_pred HHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc
Q 004092 208 ASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV 287 (774)
Q Consensus 208 ~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~ 287 (774)
.++++..+||+||.+..... ....+.+ +..++|+++.-.+ .......+...++.+.++ ..|+.
T Consensus 84 ~~i~~~~kPdvvi~~Ggy~s-~p~~~aa-~~~~~p~~i~e~n-~~~g~~nr~~~~~a~~v~------------~~f~~-- 146 (352)
T PRK12446 84 YVRIRKLKPDVIFSKGGFVS-VPVVIGG-WLNRVPVLLHESD-MTPGLANKIALRFASKIF------------VTFEE-- 146 (352)
T ss_pred HHHHHhcCCCEEEecCchhh-HHHHHHH-HHcCCCEEEECCC-CCccHHHHHHHHhhCEEE------------EEccc--
Confidence 23467799999999776652 3333333 3667898643221 111111222222222111 11211
Q ss_pred chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccH-HHHHHHHHHchhh
Q 004092 288 LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEH-ALILRALLPLFSE 366 (774)
Q Consensus 288 ~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~-~lLLeA~~~L~~~ 366 (774)
....++.+++. +.|+|+... . ....+...++.+++++++++|+.+|+.... +.+ +.+.+++..+..
T Consensus 147 ---~~~~~~~~k~~-~tG~Pvr~~---~-~~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga----~~in~~~~~~l~~l~~- 213 (352)
T PRK12446 147 ---AAKHLPKEKVI-YTGSPVREE---V-LKGNREKGLAFLGFSRKKPVITIMGGSLGA----KKINETVREALPELLL- 213 (352)
T ss_pred ---hhhhCCCCCeE-EECCcCCcc---c-ccccchHHHHhcCCCCCCcEEEEECCccch----HHHHHHHHHHHHhhcc-
Confidence 11223334544 335677652 1 112244556778888888889888876665 444 333444444432
Q ss_pred cccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc-ccHHHHHHHcCEEEEcCccCcCCccHHHHHH
Q 004092 367 VSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE-GDVDSVLNTADVVIYGSFLEEQTFPEILVKA 445 (774)
Q Consensus 367 ~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~-~dl~~~l~aaDI~V~PS~~E~qGfp~~llEA 445 (774)
+ ++++++.|... +.+.+ .. .. ++...++. +++.++|++||++|.-+ -+.++.|+
T Consensus 214 --~-------~~vv~~~G~~~--~~~~~----~~--~~--~~~~~~f~~~~m~~~~~~adlvIsr~------G~~t~~E~ 268 (352)
T PRK12446 214 --K-------YQIVHLCGKGN--LDDSL----QN--KE--GYRQFEYVHGELPDILAITDFVISRA------GSNAIFEF 268 (352)
T ss_pred --C-------cEEEEEeCCch--HHHHH----hh--cC--CcEEecchhhhHHHHHHhCCEEEECC------ChhHHHHH
Confidence 2 56666555431 22212 21 12 34556887 78999999999998654 37799999
Q ss_pred HHcCCCEEEcCCcc-c--------ccccccCccEEEEcC--CCHHHHHHHHHHHHHcCCCcHHHH
Q 004092 446 LCFRKPIIAPDLSN-I--------RKYVDDRVNGYLFPK--ENIKALTHIILQVITNGKISPFAR 499 (774)
Q Consensus 446 MA~G~PVIatd~gg-i--------~EiV~dg~~G~Lv~~--~d~e~La~aI~~Ll~d~~~~~~r~ 499 (774)
+++|+|.|..+... . .+.+.+...|..+.. -+++.+++++..+++| ++.++
T Consensus 269 ~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~---~~~~~ 330 (352)
T PRK12446 269 LTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHN---NEKYK 330 (352)
T ss_pred HHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcC---HHHHH
Confidence 99999999876531 1 123444444655543 3588999999999988 65543
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.2e-10 Score=134.20 Aligned_cols=183 Identities=14% Similarity=0.110 Sum_probs=139.1
Q ss_pred CCCCCEEEEEEecccccccccccHHHHHHHHHHchh--hcccCCCCCCCeEEEEEe-CCCC----CchHHHHHHHHHHcC
Q 004092 330 FKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFS--EVSVENESNSPIKVMILS-GDST----SNYSVVIEAIAHNLH 402 (774)
Q Consensus 330 l~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~--~~p~~~~~~~~v~LvIvG-G~~~----e~Y~~~L~~la~~lg 402 (774)
++++.+++++++ |+... |+++++++++..+.+ +.|. .+++++++| |... .+|...+.+++++..
T Consensus 385 ~dpd~~~ig~v~-Rl~~y---Kr~dLil~~i~~l~~i~~~~~-----~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~ 455 (601)
T TIGR02094 385 LDPDVLTIGFAR-RFATY---KRADLIFRDLERLARILNNPE-----RPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPE 455 (601)
T ss_pred cCCCCcEEEEEE-cchhh---hhHHHHHHHHHHHHHHhhCCC-----CCeEEEEEEecCcccchHHHHHHHHHHHHhccc
Confidence 456777888888 88887 999999999988874 2221 348999999 7544 245566667777544
Q ss_pred CCCccEEEc-cCcccH-HHHHHHcCEEEE-cCc-cCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcC---
Q 004092 403 YPLGVVKHM-AAEGDV-DSVLNTADVVIY-GSF-LEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPK--- 475 (774)
Q Consensus 403 L~~~~V~fl-G~~~dl-~~~l~aaDI~V~-PS~-~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~--- 475 (774)
.++ +|.|+ ++...+ ..+++.||++++ ||. .| ..|++=+-||..|.+.+++--|...|.. ++.||+.+.+
T Consensus 456 ~~~-kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~E--acGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~ 531 (601)
T TIGR02094 456 FRG-RIVFLENYDINLARYLVSGVDVWLNNPRRPLE--ASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEE 531 (601)
T ss_pred CCC-CEEEEcCCCHHHHHHHhhhheeEEeCCCCCcC--CchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCcc
Confidence 666 66665 566444 568999999999 998 88 5788999999999999999888888876 6679999984
Q ss_pred ---------CCHHHHHHHHHHHH-----HcCC--CcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 004092 476 ---------ENIKALTHIILQVI-----TNGK--ISPFARNIASIGRRSV-KNLMALETIEGYAMLL 525 (774)
Q Consensus 476 ---------~d~e~La~aI~~Ll-----~d~~--~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~ 525 (774)
.|+++|.++|.+.+ +++. +|..+.+|.++|.... ..|+|.+++++|.++|
T Consensus 532 ~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 532 YDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 78999999997655 2211 1345777777776655 5799999999999987
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.8e-11 Score=106.45 Aligned_cols=90 Identities=19% Similarity=0.177 Sum_probs=83.4
Q ss_pred EEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 004092 426 VVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIG 505 (774)
Q Consensus 426 I~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~a 505 (774)
|++.|+... |++..++|+||||+|||+++.+++.+++.++.++++++ |+++++++|..+++| ++.+++++++|
T Consensus 1 i~Ln~~~~~--~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~---~~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSD--GPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLEN---PEERRRIAKNA 73 (92)
T ss_pred CEeeCCCCC--CCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCC---HHHHHHHHHHH
Confidence 467788776 89999999999999999999999999999998898887 999999999999999 99999999999
Q ss_pred HHHH-HhcCHHHHHHHHH
Q 004092 506 RRSV-KNLMALETIEGYA 522 (774)
Q Consensus 506 r~~a-k~fs~~~~a~~y~ 522 (774)
++.+ ++|+|++.++++.
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 9999 5799999998875
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.12 E-value=7e-09 Score=118.47 Aligned_cols=287 Identities=12% Similarity=0.112 Sum_probs=162.5
Q ss_pred cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhh--hhhHHHHHHHHHHHhccEEEccCCc----
Q 004092 214 LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASS--GQLELLNDWKKVFNRATVVVFPDYV---- 287 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~--~~~~li~~~~~~~~~a~~vv~ps~~---- 287 (774)
..-|+|.+|..... .+..++.++..+.++.+.+|.. .+....... ....++ ...-.++.++|....
T Consensus 140 ~~~D~VWVhDYhL~-llP~~LR~~~~~~~IgfFlHiP---FPs~e~fr~lP~r~eiL----~glL~aDlIgFqt~~~~~n 211 (474)
T PF00982_consen 140 RPGDLVWVHDYHLM-LLPQMLRERGPDARIGFFLHIP---FPSSEIFRCLPWREEIL----RGLLGADLIGFQTFEYARN 211 (474)
T ss_dssp -TT-EEEEESGGGT-THHHHHHHTT--SEEEEEE-S-------HHHHTTSTTHHHHH----HHHTTSSEEEESSHHHHHH
T ss_pred cCCCEEEEeCCcHH-HHHHHHHhhcCCceEeeEEecC---CCCHHHHhhCCcHHHHH----HHhhcCCEEEEecHHHHHH
Confidence 46789999998884 7777777777788999999961 111111100 001111 111223333333222
Q ss_pred -----------------chhhcccCCCCCEEEeCCCCCCcccccccCch-----hhHHHHHHhCCCCCCEEEEEEecccc
Q 004092 288 -----------------LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDL-----YNDTVRVKMGFKPDDLVIAIVGTQFM 345 (774)
Q Consensus 288 -----------------~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~-----~k~~lR~~lgl~~~~~vIl~vGsrl~ 345 (774)
..+.+++ ..-.+.+.| .|+|...+...... ....++++++ .+..+|+.+. |++
T Consensus 212 Fl~~~~r~lg~~~~~~~~~v~~~G-r~v~v~~~p-igId~~~~~~~~~~~~v~~~~~~l~~~~~--~~~~ii~gvD-rld 286 (474)
T PF00982_consen 212 FLSCCKRLLGLEVDSDRGTVEYNG-RRVRVGVFP-IGIDPDAFAQLARSPEVQERAEELREKFK--GKRKIIVGVD-RLD 286 (474)
T ss_dssp HHHHHHHHS-EEEEETTE-EEETT-EEEEEEE-------HHHHHHHHH-S---HHHHHHHHHTT--T-SEEEEEE---B-
T ss_pred HHHHHHHHcCCcccCCCceEEECC-EEEEEEEee-ccCChHHHHhhccChHHHHHHHHHHHhcC--CCcEEEEEec-cch
Confidence 0000100 011244455 68887554322211 1344566654 3347899999 999
Q ss_pred cccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-C--CCCC---chHHHHHHHHHHc----CCCC-ccEEEcc-C
Q 004092 346 YRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-G--DSTS---NYSVVIEAIAHNL----HYPL-GVVKHMA-A 413 (774)
Q Consensus 346 ~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G--~~~e---~Y~~~L~~la~~l----gL~~-~~V~flG-~ 413 (774)
+. ||+..=++|+..+.+++|+ ...++.|+-++ . ...+ ++...+++++.+. |-.+ ..|.++- .
T Consensus 287 ~~---kGi~~kl~Afe~fL~~~P~---~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~ 360 (474)
T PF00982_consen 287 YT---KGIPEKLRAFERFLERYPE---YRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRS 360 (474)
T ss_dssp GG---G-HHHHHHHHHHHHHH-GG---GTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S-
T ss_pred hh---cCHHHHHHHHHHHHHhCcC---ccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecC
Confidence 98 9999999999999999997 44558888888 3 1222 2445555555442 2211 1255544 2
Q ss_pred c--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCC----EEEcCCcccccccccCccEEEEcCCCHHHHHHHHHH
Q 004092 414 E--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKP----IIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQ 487 (774)
Q Consensus 414 ~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~P----VIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~ 487 (774)
. +++..+|+.||+++.+|..+ |+-++..|+.+|..+ +|.|...|..+.+.++ .++++|.|++++|++|.+
T Consensus 361 ~~~~~~~aly~~aDv~lvTslrD--GmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~--al~VNP~d~~~~A~ai~~ 436 (474)
T PF00982_consen 361 LSFEELLALYRAADVALVTSLRD--GMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEA--ALLVNPWDIEEVADAIHE 436 (474)
T ss_dssp --HHHHHHHHHH-SEEEE--SSB--S--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS---EEE-TT-HHHHHHHHHH
T ss_pred CCHHHHHHHHHhhhhEEecchhh--ccCCcceEEEEEecCCCCceEeeccCCHHHHcCCc--cEEECCCChHHHHHHHHH
Confidence 2 88999999999999999999 899999999999876 7889999998888762 489999999999999999
Q ss_pred HHHcCCCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004092 488 VITNGKISP-FARNIASIGRRSVKNLMALETIEGYAMLLE 526 (774)
Q Consensus 488 Ll~d~~~~~-~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e 526 (774)
.++. +. +++..-+..++.+.+++....++.+.+-++
T Consensus 437 AL~M---~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 437 ALTM---PPEERKERHARLREYVREHDVQWWAESFLRDLK 473 (474)
T ss_dssp HHT-----HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred HHcC---CHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence 9997 54 455555667788888999998888877654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.8e-08 Score=107.14 Aligned_cols=320 Identities=15% Similarity=0.122 Sum_probs=193.3
Q ss_pred ChHHHHHHHHHHHHHHc--CCeEEEEEcCCCcchhhhhhcC--ccEEEcccch--hHHHHhhhcCccEEEEcCCchhHHH
Q 004092 157 DPQQLQMVTIAIALREI--GYAIQVYSLEDGRAHEVWRNIG--VPVAILQTGR--EKASFVNWLNYDGILVNSLEAKVVI 230 (774)
Q Consensus 157 GG~e~~v~~Lak~L~~~--G~eV~V~t~~~~~~~~~~~~~g--i~i~~l~~~~--~l~~~i~~~~~DIIhvhs~~~~~~l 230 (774)
=|-...+..|.+.|.+. +..+.+-+..+......-+..+ +....++... ...++++..+||++++...+..+.+
T Consensus 59 VGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~~~~v~rFl~~~~P~l~Ii~EtElWPnl 138 (419)
T COG1519 59 VGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDLPIAVRRFLRKWRPKLLIIMETELWPNL 138 (419)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCchHHHHHHHHhcCCCEEEEEeccccHHH
Confidence 36667888899999988 6666665544322222222222 3444455443 4567788899999887765542222
Q ss_pred HHHHhCCCCCCCEEEEEcCchhh-hhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCCEEEeCCCCCC
Q 004092 231 SNIMQEPFKSLPLVWTIHEGTLA-TRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAK 309 (774)
Q Consensus 231 ~~Ll~~~~~~ipvI~tiHg~~l~-~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd 309 (774)
..-. +..++|++. +.+ .+- +....| .++-...+..+...+.+..++.....-+..+...++.+.-|.-.|
T Consensus 139 i~e~--~~~~~p~~L-vNa-RLS~rS~~~y-----~k~~~~~~~~~~~i~li~aQse~D~~Rf~~LGa~~v~v~GNlKfd 209 (419)
T COG1519 139 INEL--KRRGIPLVL-VNA-RLSDRSFARY-----AKLKFLARLLFKNIDLILAQSEEDAQRFRSLGAKPVVVTGNLKFD 209 (419)
T ss_pred HHHH--HHcCCCEEE-Eee-eechhhhHHH-----HHHHHHHHHHHHhcceeeecCHHHHHHHHhcCCcceEEecceeec
Confidence 2222 356788764 221 011 111111 111122333445555555555443333333333343333333333
Q ss_pred cccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCC
Q 004092 310 AWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTS 388 (774)
Q Consensus 310 ~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e 388 (774)
... .+........+|..++.+ .++++..++ .+ ..-+.++++...+++++|+ ..+++|= -|++
T Consensus 210 ~~~-~~~~~~~~~~~r~~l~~~--r~v~iaaST--H~----GEeei~l~~~~~l~~~~~~-------~llIlVPRHpER- 272 (419)
T COG1519 210 IEP-PPQLAAELAALRRQLGGH--RPVWVAAST--HE----GEEEIILDAHQALKKQFPN-------LLLILVPRHPER- 272 (419)
T ss_pred CCC-ChhhHHHHHHHHHhcCCC--CceEEEecC--CC----chHHHHHHHHHHHHhhCCC-------ceEEEecCChhh-
Confidence 210 111112245667776654 445655552 33 5667799999999999999 8888887 4544
Q ss_pred chHHHHHHHHHHcCCCC------------ccEEEccCcccHHHHHHHcCEEEEc-CccCcCCccHHHHHHHHcCCCEEEc
Q 004092 389 NYSVVIEAIAHNLHYPL------------GVVKHMAAEGDVDSVLNTADVVIYG-SFLEEQTFPEILVKALCFRKPIIAP 455 (774)
Q Consensus 389 ~Y~~~L~~la~~lgL~~------------~~V~flG~~~dl~~~l~aaDI~V~P-S~~E~qGfp~~llEAMA~G~PVIat 455 (774)
-..+++++++.|+.- ..|.......++..+|..+||.+.. |+.+ --|.-++|+.++|+|||+-
T Consensus 273 --f~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~--~GGHN~LEpa~~~~pvi~G 348 (419)
T COG1519 273 --FKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVP--IGGHNPLEPAAFGTPVIFG 348 (419)
T ss_pred --HHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccC--CCCCChhhHHHcCCCEEeC
Confidence 267778888876641 1243333447899999999996664 6665 3588899999999999985
Q ss_pred CC----cccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHh
Q 004092 456 DL----SNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKN 511 (774)
Q Consensus 456 d~----ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~ 511 (774)
+. ..+.+.+.+...|+.++ |.+.++.++..++.| ++.+++|++++...+++
T Consensus 349 p~~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~---~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 349 PYTFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLLAD---EDKREAYGRAGLEFLAQ 403 (419)
T ss_pred CccccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHH
Confidence 43 34444454544577776 588999999999999 99999999999988854
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.2e-09 Score=117.78 Aligned_cols=285 Identities=9% Similarity=-0.002 Sum_probs=188.4
Q ss_pred CccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCc----hhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc---
Q 004092 215 NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEG----TLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV--- 287 (774)
Q Consensus 215 ~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~----~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~--- 287 (774)
.-|+|.+|.... ..+..++.+.....++-+.+|-. .++..+.. ...++. ....++.++|....
T Consensus 123 ~~D~VWVHDYhL-~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~-----r~eil~----glL~aDlIGFqt~~y~r 192 (474)
T PRK10117 123 DDDIIWIHDYHL-LPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPP-----HDELLE----QLCDYDLLGFQTENDRL 192 (474)
T ss_pred CCCEEEEeccHh-hHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCC-----hHHHHH----HHHhCccceeCCHHHHH
Confidence 448999999988 47777776667778999999961 11111100 001000 11111222221111
Q ss_pred -----------------chhhcccCCCCCEEEeCCCCCCcccccccCch----hhHHHHHHhCCCCCCEEEEEEeccccc
Q 004092 288 -----------------LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDL----YNDTVRVKMGFKPDDLVIAIVGTQFMY 346 (774)
Q Consensus 288 -----------------~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~----~k~~lR~~lgl~~~~~vIl~vGsrl~~ 346 (774)
....+. -..-.+.+.| +|||+..+...... ....++++++ +..+|+.+. |+++
T Consensus 193 nFl~~~~~~lg~~~~~~~~v~~~-gr~v~v~~~P-igID~~~~~~~a~~~~~~~~~~lr~~~~---~~~lilgVD-RLDy 266 (474)
T PRK10117 193 AFLDCLSNLTRVTTRSGKSHTAW-GKAFRTEVYP-IGIEPDEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVE-RLDY 266 (474)
T ss_pred HHHHHHHHHcCCcccCCCeEEEC-CeEEEEEEEE-CeEcHHHHHHHhhchHHHHHHHHHHHcC---CCeEEEEec-cccc
Confidence 000000 0011244555 78887554332221 1334555554 456888888 9999
Q ss_pred ccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCC---C---chHHHHHHHHHHcCCC----C-ccEEEccC--
Q 004092 347 RGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDST---S---NYSVVIEAIAHNLHYP----L-GVVKHMAA-- 413 (774)
Q Consensus 347 ~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~---e---~Y~~~L~~la~~lgL~----~-~~V~flG~-- 413 (774)
- ||+..=++|+..+.+++|+ -..++.|+-+..|.+ + +++..+++++.+.+-. + .-|.++..
T Consensus 267 t---KGi~~rl~Afe~fL~~~Pe---~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~ 340 (474)
T PRK10117 267 S---KGLPERFLAYEALLEKYPQ---HHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHF 340 (474)
T ss_pred c---cCHHHHHHHHHHHHHhChh---hcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCC
Confidence 8 8888889999999999997 444588887773322 2 3455566665543221 1 12555432
Q ss_pred -cccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCC-----CEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHH
Q 004092 414 -EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRK-----PIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQ 487 (774)
Q Consensus 414 -~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~-----PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~ 487 (774)
.+++..+|..||+++..|..+ |+-++..|+.||.. ++|.|...|..+.+.+ .++|+|.|++++|++|.+
T Consensus 341 ~~~~l~alyr~ADv~lVTplRD--GMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~~---AllVNP~d~~~~A~Ai~~ 415 (474)
T PRK10117 341 DRKLLMKIFRYSDVGLVTPLRD--GMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS---ALIVNPYDRDEVAAALDR 415 (474)
T ss_pred CHHHHHHHHHhccEEEeccccc--ccccccchheeeecCCCCccEEEecccchHHHhCC---CeEECCCCHHHHHHHHHH
Confidence 278899999999999999999 89999999999976 3788999999888853 789999999999999999
Q ss_pred HHHcCCCc-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 004092 488 VITNGKIS-PFARNIASIGRRSVKNLMALETIEGYAMLLENVL 529 (774)
Q Consensus 488 Ll~d~~~~-~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll 529 (774)
.++. + +++++.-+..++.+.+++....++.+.+-+.++.
T Consensus 416 AL~M---p~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 416 ALTM---PLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HHcC---CHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 9997 5 3444555666778888999999999998887764
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.2e-09 Score=120.27 Aligned_cols=138 Identities=9% Similarity=0.129 Sum_probs=112.0
Q ss_pred HHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCC-CCchHHHHHHHHHHcCCCCccEEEccCcc-cHHHHHHHcCEEEEc
Q 004092 354 ALILRALLPLFSEVSVENESNSPIKVMILS-GDS-TSNYSVVIEAIAHNLHYPLGVVKHMAAEG-DVDSVLNTADVVIYG 430 (774)
Q Consensus 354 ~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~-~e~Y~~~L~~la~~lgL~~~~V~flG~~~-dl~~~l~aaDI~V~P 430 (774)
...|+++..|.++.|+ ++|.| | +.. . ..|+++ .++ ++ .+.+.|+.. ++.++|..||+++..
T Consensus 291 s~~I~~i~~Lv~~lPd-------~~f~I-ga~te~s----~kL~~L-~~y--~n-vvly~~~~~~~l~~ly~~~dlyLdi 354 (438)
T TIGR02919 291 SDQIEHLEEIVQALPD-------YHFHI-AALTEMS----SKLMSL-DKY--DN-VKLYPNITTQKIQELYQTCDIYLDI 354 (438)
T ss_pred HHHHHHHHHHHHhCCC-------cEEEE-EecCccc----HHHHHH-Hhc--CC-cEEECCcChHHHHHHHHhccEEEEc
Confidence 4459999999999999 99999 8 654 4 677788 644 76 788888775 999999999999999
Q ss_pred CccCcCCccHHHHHHHHcCCCEEEcCCc-ccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Q 004092 431 SFLEEQTFPEILVKALCFRKPIIAPDLS-NIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV 509 (774)
Q Consensus 431 S~~E~qGfp~~llEAMA~G~PVIatd~g-gi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a 509 (774)
|..| |+++++.|||+.|+|||+.+.. |..+++.+ |.+++.+++++|+++|..++.+ ++..++.-..-++.|
T Consensus 355 n~~e--~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d---~~~~~~~~~~q~~~a 426 (438)
T TIGR02919 355 NHGN--EILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLND---PNQFRELLEQQREHA 426 (438)
T ss_pred cccc--cHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHh
Confidence 9999 8999999999999999998765 45577766 8899999999999999999999 876665444434444
Q ss_pred HhcCHH
Q 004092 510 KNLMAL 515 (774)
Q Consensus 510 k~fs~~ 515 (774)
..-+.+
T Consensus 427 ~~~~~~ 432 (438)
T TIGR02919 427 NDISKE 432 (438)
T ss_pred ccCCHH
Confidence 333433
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.1e-08 Score=112.93 Aligned_cols=111 Identities=14% Similarity=0.137 Sum_probs=77.4
Q ss_pred cHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccccccc-----CccEEEEcC---CCH----HHHHH
Q 004092 416 DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDD-----RVNGYLFPK---ENI----KALTH 483 (774)
Q Consensus 416 dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~d-----g~~G~Lv~~---~d~----e~La~ 483 (774)
+..+++..||+.|+||++|+ +|.+.+|+.++|+|.|+|+..|....+.+ ...|+.+-. .+. +++++
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEP--WGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~ 539 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEP--WGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLAD 539 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBS--S-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHH
T ss_pred CHHHHhccCceeeecccccc--ccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHH
Confidence 56789999999999999995 99999999999999999999988654432 234655432 334 45555
Q ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 484 IILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 484 aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
.|..+.... ...+..+.+++...++.++|+++..-|.+.++-+++
T Consensus 540 ~l~~f~~~~--~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~ 584 (633)
T PF05693_consen 540 FLYKFCQLS--RRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALR 584 (633)
T ss_dssp HHHHHHT----HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHhCC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 555555540 334556777777777889999999999999987765
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.7e-08 Score=109.06 Aligned_cols=286 Identities=12% Similarity=0.111 Sum_probs=186.0
Q ss_pred cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCc----hhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc--
Q 004092 214 LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEG----TLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV-- 287 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~----~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~-- 287 (774)
.+=|+|.+|.... ..++.++..+....++.+++|-. .++..+.. ...++. ....++.+.|....
T Consensus 146 ~~gDiIWVhDYhL-~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~-----r~eIl~----gll~~dligFqt~~y~ 215 (486)
T COG0380 146 EPGDIIWVHDYHL-LLVPQMLRERIPDAKIGFFLHIPFPSSEVFRCLPW-----REEILE----GLLGADLIGFQTESYA 215 (486)
T ss_pred CCCCEEEEEechh-hhhHHHHHHhCCCceEEEEEeCCCCCHHHHhhCch-----HHHHHH----HhhcCCeeEecCHHHH
Confidence 3459999999988 37777776667777899999951 11111110 011110 11123333332222
Q ss_pred ----------------chhhcccCCC--CCEEEeCCCCCCcccccccCchh-----hHHHHHHhCCCCCCEEEEEEeccc
Q 004092 288 ----------------LPMMYSAFDA--GNYYVIPGSPAKAWEADTNMDLY-----NDTVRVKMGFKPDDLVIAIVGTQF 344 (774)
Q Consensus 288 ----------------~~~i~~~v~~--~ki~vIpg~gvd~~~~~~~~~~~-----k~~lR~~lgl~~~~~vIl~vGsrl 344 (774)
....+++.+. .++..+| +|+|+..+....+.. -.++++.++ .+..+|+.+. |+
T Consensus 216 ~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~P-IgID~~~~~~~~~~~~v~~~~~el~~~~~--~~~kiivgvD-Rl 291 (486)
T COG0380 216 RNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFP-IGIDPEEFERALKSPSVQEKVLELKAELG--RNKKLIVGVD-RL 291 (486)
T ss_pred HHHHHHHHHhccccccccccccccCCceEEEEEEe-eecCHHHHHHhhcCCchhhHHHHHHHHhc--CCceEEEEeh-hc
Confidence 0011111111 2345555 788876554333222 233444443 3367888888 99
Q ss_pred ccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCC---Cc---hHHHHHHHHHHcC----CCC-ccEEEccC
Q 004092 345 MYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDST---SN---YSVVIEAIAHNLH----YPL-GVVKHMAA 413 (774)
Q Consensus 345 ~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~---e~---Y~~~L~~la~~lg----L~~-~~V~flG~ 413 (774)
.+- ||+..=+.|+.++..++|+ -+.++.|+-++.+.+ ++ ++..++..+.+.+ -.+ ..|.++-.
T Consensus 292 Dy~---kGi~~rl~Afe~lL~~~Pe---~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~ 365 (486)
T COG0380 292 DYS---KGIPQRLLAFERLLEEYPE---WRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHR 365 (486)
T ss_pred ccc---cCcHHHHHHHHHHHHhChh---hhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEec
Confidence 998 8888889999999999997 445588888883222 23 3444444444322 111 12555542
Q ss_pred ---cccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCC----CEEEcCCcccccccccCccEEEEcCCCHHHHHHHHH
Q 004092 414 ---EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRK----PIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIIL 486 (774)
Q Consensus 414 ---~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~----PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~ 486 (774)
.+++..+|..||+++..|..+ |+-++..|+.||-- |.|-|...|....+.+ .++++|.|.+++|++|.
T Consensus 366 ~~~~~~l~al~~~aDv~lVtplrD--GMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliVNP~d~~~va~ai~ 440 (486)
T COG0380 366 DLDRNELLALYRAADVMLVTPLRD--GMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIVNPWDTKEVADAIK 440 (486)
T ss_pred cCCHHHHHHHHhhhceeeeccccc--cccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeECCCChHHHHHHHH
Confidence 278999999999999999999 99999999999864 7888998888888866 78999999999999999
Q ss_pred HHHHcCCCcHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004092 487 QVITNGKISPF-ARNIASIGRRSVKNLMALETIEGYAMLLEN 527 (774)
Q Consensus 487 ~Ll~d~~~~~~-r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ 527 (774)
+.|+. +.. +++.-+..++.+..++....++.+.+-+..
T Consensus 441 ~AL~m---~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 441 RALTM---SLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred HHhcC---CHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 99997 544 444445566777788988888887776654
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.4e-07 Score=114.66 Aligned_cols=285 Identities=10% Similarity=0.080 Sum_probs=185.8
Q ss_pred cEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCc----hhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc-----
Q 004092 217 DGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEG----TLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV----- 287 (774)
Q Consensus 217 DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~----~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~----- 287 (774)
|+|.+|.... ..+..++.++....++-+.+|-. .++..++ ..+.++. ..-.++.++|....
T Consensus 203 d~VWVhDYhL-~llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP-----~r~eiL~----glL~aDlIGFht~~yar~F 272 (854)
T PLN02205 203 DFVWIHDYHL-MVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLP-----IREELLR----ALLNSDLIGFHTFDYARHF 272 (854)
T ss_pred CEEEEeCchh-hHHHHHHHhhCCCCcEEEEecCCCCChHHHhhCC-----cHHHHHH----HHhcCCeEEecCHHHHHHH
Confidence 8999999988 47777777777888999999961 1111110 0011110 11122222222221
Q ss_pred ------------------chhhcccCCCCCEEEeCCCCCCcccccccCchh-----hHHHHHHhCCCCCCEEEEEEeccc
Q 004092 288 ------------------LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLY-----NDTVRVKMGFKPDDLVIAIVGTQF 344 (774)
Q Consensus 288 ------------------~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~-----k~~lR~~lgl~~~~~vIl~vGsrl 344 (774)
....+.+ ..-.+.+.| +|+|...+....... .++++++++- ++..+|+.+. |+
T Consensus 273 l~~~~r~lgl~~~~~~g~~~~~~~G-r~v~v~~~P-igId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ilgVD-rl 348 (854)
T PLN02205 273 LSCCSRMLGLSYESKRGYIGLEYYG-RTVSIKILP-VGIHMGQLQSVLSLPETEAKVKELIKQFCD-QDRIMLLGVD-DM 348 (854)
T ss_pred HHHHHHHhCCcccCCCcceeEEECC-cEEEEEEEe-CeEcHHHHHHHhcChhHHHHHHHHHHHhcc-CCCEEEEEcc-Cc
Confidence 0000100 111244555 788875543332211 2345555542 2456888888 99
Q ss_pred ccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCC---C---chHHHHHHHHHHc----CCCC-ccEEEcc-
Q 004092 345 MYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDST---S---NYSVVIEAIAHNL----HYPL-GVVKHMA- 412 (774)
Q Consensus 345 ~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~---e---~Y~~~L~~la~~l----gL~~-~~V~flG- 412 (774)
.+- ||+..=+.|+.++.+++|+ -..++.|+-+.-|.+ + +++..+.+++.+. |-.+ ..|.++.
T Consensus 349 D~~---KGi~~kl~A~e~~L~~~P~---~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~ 422 (854)
T PLN02205 349 DIF---KGISLKLLAMEQLLMQHPE---WQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDA 422 (854)
T ss_pred ccc---cCHHHHHHHHHHHHHhCcc---ccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEec
Confidence 998 8898999999999999997 334578887773322 2 3344455555542 2211 1255554
Q ss_pred C--cccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCC-------------------CEEEcCCcccccccccCccEE
Q 004092 413 A--EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRK-------------------PIIAPDLSNIRKYVDDRVNGY 471 (774)
Q Consensus 413 ~--~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~-------------------PVIatd~ggi~EiV~dg~~G~ 471 (774)
. .+++..+|+.||+++..+..+ |+-++..|+.+|.. .+|.|...|....+.. .+
T Consensus 423 ~~~~~e~~aly~~ADv~lVT~lRD--GMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~~---Ai 497 (854)
T PLN02205 423 PLKFYERVAYYVVAECCLVTAVRD--GMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLSG---AI 497 (854)
T ss_pred CCCHHHHHHHHHhccEEEeccccc--cccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhCc---Ce
Confidence 2 288999999999999999999 89999999999864 3678888888777742 78
Q ss_pred EEcCCCHHHHHHHHHHHHHcCCCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 004092 472 LFPKENIKALTHIILQVITNGKISP-FARNIASIGRRSVKNLMALETIEGYAMLLENVL 529 (774)
Q Consensus 472 Lv~~~d~e~La~aI~~Ll~d~~~~~-~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll 529 (774)
+|+|.|++++|++|.+.++. +. +++..-+..++++.+++....++.+..-++.+.
T Consensus 498 ~VNP~d~~~~a~ai~~AL~m---~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~ 553 (854)
T PLN02205 498 RVNPWNIDAVADAMDSALEM---AEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTC 553 (854)
T ss_pred EECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999997 53 344444566778888999998888887776653
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.6e-07 Score=102.89 Aligned_cols=168 Identities=15% Similarity=0.195 Sum_probs=109.5
Q ss_pred CCCCCC-EEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCC-
Q 004092 329 GFKPDD-LVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPL- 405 (774)
Q Consensus 329 gl~~~~-~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~- 405 (774)
+++++. .+++..|||.... .+++..+++|+..+.++ ++ +.+++.- |... .+.+++...+.++..
T Consensus 200 ~l~~~~~~lllLpGSR~ae~--~~~lp~~l~al~~L~~~-~~-------~~~v~~~~~~~~---~~~~~~~l~~~g~~~~ 266 (396)
T TIGR03492 200 PLLTGRFRIALLPGSRPPEA--YRNLKLLLRALEALPDS-QP-------FVFLAAIVPSLS---LEKLQAILEDLGWQLE 266 (396)
T ss_pred ccCCCCCEEEEECCCCHHHH--HccHHHHHHHHHHHhhC-CC-------eEEEEEeCCCCC---HHHHHHHHHhcCceec
Confidence 444443 4555556553332 26778999999999755 55 7777655 4322 145555555445431
Q ss_pred ------------ccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccc---ccccc----
Q 004092 406 ------------GVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIR---KYVDD---- 466 (774)
Q Consensus 406 ------------~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~---EiV~d---- 466 (774)
+.+.+..+..++..+|++||++|..| | .+-.|++++|+|+|..+..+.. .+...
T Consensus 267 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADlvI~rS-----G--t~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l 339 (396)
T TIGR03492 267 GSSEDQTSLFQKGTLEVLLGRGAFAEILHWADLGIAMA-----G--TATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRL 339 (396)
T ss_pred CCccccchhhccCceEEEechHhHHHHHHhCCEEEECc-----C--HHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhh
Confidence 13666667788999999999999987 3 3449999999999998754331 22222
Q ss_pred -CccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHH
Q 004092 467 -RVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEG 520 (774)
Q Consensus 467 -g~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~ 520 (774)
+ .++.+...+++.+++++..+++| ++.+++|.+++++.. +....+.+++.
T Consensus 340 ~g-~~~~l~~~~~~~l~~~l~~ll~d---~~~~~~~~~~~~~~lg~~~a~~~ia~~ 391 (396)
T TIGR03492 340 LG-GSVFLASKNPEQAAQVVRQLLAD---PELLERCRRNGQERMGPPGASARIAES 391 (396)
T ss_pred cC-CEEecCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 3 34555567889999999999999 888888875444333 33444455443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.6e-06 Score=93.18 Aligned_cols=247 Identities=15% Similarity=0.128 Sum_probs=137.7
Q ss_pred cCCCCC-hHHHHHHHHHHHHHHcCCeEEEEEcCCCcc-hhhhhhcCccEEEcccch-------hHHHHhhhcCccEEEEc
Q 004092 152 PDLLID-PQQLQMVTIAIALREIGYAIQVYSLEDGRA-HEVWRNIGVPVAILQTGR-------EKASFVNWLNYDGILVN 222 (774)
Q Consensus 152 ~~L~~G-G~e~~v~~Lak~L~~~G~eV~V~t~~~~~~-~~~~~~~gi~i~~l~~~~-------~l~~~i~~~~~DIIhvh 222 (774)
++..+| |--..+..||+.|.++|++|..++...... ....+..+.++..++... .+...++..+||+|++.
T Consensus 8 a~~~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D 87 (279)
T TIGR03590 8 ASSEIGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVD 87 (279)
T ss_pred CCccccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEc
Confidence 344455 666789999999999999999999876443 345567777777665432 35566777899999999
Q ss_pred CCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc-chhhccc-CCCCCE
Q 004092 223 SLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV-LPMMYSA-FDAGNY 300 (774)
Q Consensus 223 s~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~-~~~i~~~-v~~~ki 300 (774)
+......+...+.. .+++++ .+.+.... . + .++.+.-++.. ....|.. ++...
T Consensus 88 ~y~~~~~~~~~~k~--~~~~l~-~iDD~~~~-~---~-----------------~~D~vin~~~~~~~~~y~~~~~~~~- 142 (279)
T TIGR03590 88 HYGLDADWEKLIKE--FGRKIL-VIDDLADR-P---H-----------------DCDLLLDQNLGADASDYQGLVPANC- 142 (279)
T ss_pred CCCCCHHHHHHHHH--hCCeEE-EEecCCCC-C---c-----------------CCCEEEeCCCCcCHhHhcccCcCCC-
Confidence 87654333333321 233433 33321000 0 0 11111111110 0011111 11122
Q ss_pred EEeCCC---CCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCe
Q 004092 301 YVIPGS---PAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPI 377 (774)
Q Consensus 301 ~vIpg~---gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v 377 (774)
.+.-|. ++.. ++.... .....-++...+++++| -..+. +....+++++..+.. + +
T Consensus 143 ~~l~G~~Y~~lr~---eF~~~~-----~~~~~~~~~~~iLi~~G-G~d~~---~~~~~~l~~l~~~~~---~-------~ 200 (279)
T TIGR03590 143 RLLLGPSYALLRE---EFYQLA-----TANKRRKPLRRVLVSFG-GADPD---NLTLKLLSALAESQI---N-------I 200 (279)
T ss_pred eEEecchHHhhhH---HHHHhh-----HhhhcccccCeEEEEeC-CcCCc---CHHHHHHHHHhcccc---C-------c
Confidence 222232 2221 110000 00000012244777777 44453 445566777776532 2 4
Q ss_pred EEE-EEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcC
Q 004092 378 KVM-ILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456 (774)
Q Consensus 378 ~Lv-IvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd 456 (774)
++. ++| +... ..+.+++.++. .+ +|.+.++++++.++|+.||++|.+. |.++.|++++|+|+|+-.
T Consensus 201 ~i~vv~G-~~~~-~~~~l~~~~~~--~~--~i~~~~~~~~m~~lm~~aDl~Is~~-------G~T~~E~~a~g~P~i~i~ 267 (279)
T TIGR03590 201 SITLVTG-SSNP-NLDELKKFAKE--YP--NIILFIDVENMAELMNEADLAIGAA-------GSTSWERCCLGLPSLAIC 267 (279)
T ss_pred eEEEEEC-CCCc-CHHHHHHHHHh--CC--CEEEEeCHHHHHHHHHHCCEEEECC-------chHHHHHHHcCCCEEEEE
Confidence 444 555 2211 12667777763 22 5999999999999999999999853 479999999999999876
Q ss_pred Cc
Q 004092 457 LS 458 (774)
Q Consensus 457 ~g 458 (774)
..
T Consensus 268 ~~ 269 (279)
T TIGR03590 268 LA 269 (279)
T ss_pred ec
Confidence 53
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.8e-06 Score=97.35 Aligned_cols=332 Identities=11% Similarity=0.090 Sum_probs=203.3
Q ss_pred CCCCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCc--chhhhhhcCc-cEEEcc--cchhHHHHhhhcCc
Q 004092 142 YRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGR--AHEVWRNIGV-PVAILQ--TGREKASFVNWLNY 216 (774)
Q Consensus 142 ~rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~--~~~~~~~~gi-~i~~l~--~~~~l~~~i~~~~~ 216 (774)
.+++||.++..+|..-.....+..+.+.+.+-.+||..+..+... ..+.+-...+ .+..+. .......-|...+.
T Consensus 257 ~~rlRvGylS~dlr~Havg~l~~~v~e~hDRdkfEvfay~~g~~~~dal~~rI~a~~~~~~~~~~~dd~e~a~~I~~d~I 336 (620)
T COG3914 257 GKRLRVGYLSSDLRSHAVGFLLRWVFEYHDRDKFEVFAYSLGPPHTDALQERISAAVEKWYPIGRMDDAEIANAIRTDGI 336 (620)
T ss_pred ccceeEEEeccccccchHHHHHHHHHHHhchhheEEEEEecCCCCchhHHHHHHHhhhheeccCCcCHHHHHHHHHhcCC
Confidence 345899999999999888888999999999888998888877322 1122211111 122332 23445666777889
Q ss_pred cEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchh--hhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhccc
Q 004092 217 DGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTL--ATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSA 294 (774)
Q Consensus 217 DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l--~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~ 294 (774)
||.+--+.........+++ .+..|+.+++=|.+- ..+...|. .++.+++|...-.. |
T Consensus 337 dILvDl~g~T~d~r~~v~A--~RpAPiqvswlGy~aT~g~p~~DY~----------------I~D~y~vPp~ae~y-y-- 395 (620)
T COG3914 337 DILVDLDGHTVDTRCQVFA--HRPAPIQVSWLGYPATTGSPNMDYF----------------ISDPYTVPPTAEEY-Y-- 395 (620)
T ss_pred eEEEeccCceeccchhhhh--cCCCceEEeecccccccCCCcceEE----------------eeCceecCchHHHH-H--
Confidence 9877543332112222232 334688887776221 10111111 11111111100000 0
Q ss_pred CCCCCEEEeC--CCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCC
Q 004092 295 FDAGNYYVIP--GSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENE 372 (774)
Q Consensus 295 v~~~ki~vIp--g~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~ 372 (774)
.+++.-+| ..|+|-. ....+. ..|..+|++++.++.++++ .+. |-...+++-..++.+.-|+
T Consensus 396 --sEkl~RLp~cy~p~d~~--~~v~p~---~sR~~lglp~~avVf~c~~---n~~---K~~pev~~~wmqIL~~vP~--- 459 (620)
T COG3914 396 --SEKLWRLPQCYQPVDGF--EPVTPP---PSRAQLGLPEDAVVFCCFN---NYF---KITPEVFALWMQILSAVPN--- 459 (620)
T ss_pred --HHHHHhcccccCCCCCc--ccCCCC---cchhhcCCCCCeEEEEecC---Ccc---cCCHHHHHHHHHHHHhCCC---
Confidence 00000000 0011110 000000 1267899999986666666 223 6677778888899999998
Q ss_pred CCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCC
Q 004092 373 SNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRK 450 (774)
Q Consensus 373 ~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~ 450 (774)
-.|++.||+..++..+.+++++++.|+...++.|.+.. ++..+.|.-||+++=..-+. -..+.+||+-+|+
T Consensus 460 ----Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY~---g~TTa~daLwm~v 532 (620)
T COG3914 460 ----SVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPYG---GHTTASDALWMGV 532 (620)
T ss_pred ----cEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccCC---CccchHHHHHhcC
Confidence 78999995566677889999999999988899999965 67788999999999665443 4678899999999
Q ss_pred CEEEcC-------Cc-------ccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH---hcC
Q 004092 451 PIIAPD-------LS-------NIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVK---NLM 513 (774)
Q Consensus 451 PVIatd-------~g-------gi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak---~fs 513 (774)
|||+-. .| |++|.| +. +.++..+.-..+=+| ...+++.+..-+...+ -|+
T Consensus 533 PVlT~~G~~FasR~~~si~~~agi~e~v--------A~--s~~dYV~~av~~g~d---ral~q~~r~~l~~~r~tspL~d 599 (620)
T COG3914 533 PVLTRVGEQFASRNGASIATNAGIPELV--------AD--SRADYVEKAVAFGSD---RALRQQVRAELKRSRQTSPLFD 599 (620)
T ss_pred ceeeeccHHHHHhhhHHHHHhcCCchhh--------cC--CHHHHHHHHHHhccc---HHHHHhhHHHHHhccccCcccC
Confidence 999732 22 333333 22 556666666666666 6666666554444442 379
Q ss_pred HHHHHHHHHHHHHHHhc
Q 004092 514 ALETIEGYAMLLENVLK 530 (774)
Q Consensus 514 ~~~~a~~y~~L~e~ll~ 530 (774)
.+..+..+..+|..+.+
T Consensus 600 ~~~far~le~~y~~M~~ 616 (620)
T COG3914 600 PKAFARKLETLYWGMWS 616 (620)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987654
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.4e-05 Score=89.79 Aligned_cols=82 Identities=13% Similarity=0.049 Sum_probs=63.1
Q ss_pred CCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----ccccccCccEEEEcCC-
Q 004092 402 HYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKYVDDRVNGYLFPKE- 476 (774)
Q Consensus 402 gL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~EiV~dg~~G~Lv~~~- 476 (774)
.+++ +|.+.++. ....+|..||++|.- |-.+++.||+++|+|+|..+..+- .+.+.+...|...+..
T Consensus 285 ~~~~-~v~~~~~~-p~~~ll~~~d~~I~h------gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~ 356 (401)
T cd03784 285 DLPD-NVRVVDFV-PHDWLLPRCAAVVHH------GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE 356 (401)
T ss_pred CCCC-ceEEeCCC-CHHHHhhhhheeeec------CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCccc
Confidence 4555 89999997 467889999999943 335899999999999999876642 3344444457766654
Q ss_pred -CHHHHHHHHHHHHHc
Q 004092 477 -NIKALTHIILQVITN 491 (774)
Q Consensus 477 -d~e~La~aI~~Ll~d 491 (774)
+++++++++.+++++
T Consensus 357 ~~~~~l~~al~~~l~~ 372 (401)
T cd03784 357 LTAERLAAALRRLLDP 372 (401)
T ss_pred CCHHHHHHHHHHHhCH
Confidence 689999999999987
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.1e-08 Score=94.97 Aligned_cols=155 Identities=15% Similarity=0.012 Sum_probs=78.3
Q ss_pred CCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh--hhcC--------ccEEEcccchhHHHHhhhcCccEEEEc
Q 004092 153 DLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW--RNIG--------VPVAILQTGREKASFVNWLNYDGILVN 222 (774)
Q Consensus 153 ~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~--~~~g--------i~i~~l~~~~~l~~~i~~~~~DIIhvh 222 (774)
....||+|+++.+++++|.++||+|+|++....+..... .... ...........+...++..+||+||+|
T Consensus 8 ~~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~DiVh~~ 87 (177)
T PF13439_consen 8 LPNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKPDIVHIH 87 (177)
T ss_dssp TTSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT-SEEECC
T ss_pred CCCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCCCeEEec
Confidence 456899999999999999999999999998664322111 0000 001111112335556777899999999
Q ss_pred CCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHH-HHHHHHHhccEEEccCCcchh--hcccCCCCC
Q 004092 223 SLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLN-DWKKVFNRATVVVFPDYVLPM--MYSAFDAGN 299 (774)
Q Consensus 223 s~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~-~~~~~~~~a~~vv~ps~~~~~--i~~~v~~~k 299 (774)
..... ....+... ++|+|++.|+.................+.. .....+..++.++..+..... ...+++.++
T Consensus 88 ~~~~~-~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~~~~~~~k 163 (177)
T PF13439_consen 88 GPPAF-WIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIKFGIPPEK 163 (177)
T ss_dssp TTHCC-CHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHHHT--SS-
T ss_pred ccchh-HHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHHhCCcccC
Confidence 87652 22222211 689999999643210000001111111111 122235667777777666322 223567789
Q ss_pred EEEeCCCCCCccc
Q 004092 300 YYVIPGSPAKAWE 312 (774)
Q Consensus 300 i~vIpg~gvd~~~ 312 (774)
+.+||| |+|...
T Consensus 164 i~vI~n-gid~~~ 175 (177)
T PF13439_consen 164 IHVIYN-GIDTDR 175 (177)
T ss_dssp EEE-----B-CCC
T ss_pred CEEEEC-CccHHH
Confidence 999994 888743
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.9e-05 Score=88.64 Aligned_cols=110 Identities=16% Similarity=0.151 Sum_probs=75.1
Q ss_pred CCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccc----cccccCccEEEEcCC--
Q 004092 403 YPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIR----KYVDDRVNGYLFPKE-- 476 (774)
Q Consensus 403 L~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~----EiV~dg~~G~Lv~~~-- 476 (774)
+++ +|.+.+++.. ..++..||++|..+ | ..+++|||++|+|+|+.+..+-. +.+.+...|..++..
T Consensus 273 ~~~-~v~~~~~~p~-~~ll~~~~~~I~hg-----G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~ 344 (392)
T TIGR01426 273 LPP-NVEVRQWVPQ-LEILKKADAFITHG-----G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEV 344 (392)
T ss_pred CCC-CeEEeCCCCH-HHHHhhCCEEEECC-----C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccC
Confidence 455 7999998854 48899999999754 3 35889999999999997655433 334444457766643
Q ss_pred CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004092 477 NIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAM 523 (774)
Q Consensus 477 d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~ 523 (774)
++++++++|.++++| ++.++++.+.+......-..+..++...+
T Consensus 345 ~~~~l~~ai~~~l~~---~~~~~~~~~l~~~~~~~~~~~~aa~~i~~ 388 (392)
T TIGR01426 345 TAEKLREAVLAVLSD---PRYAERLRKMRAEIREAGGARRAADEIEG 388 (392)
T ss_pred CHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 578999999999999 76555554443333333345555544443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.4e-06 Score=94.07 Aligned_cols=245 Identities=13% Similarity=0.076 Sum_probs=136.7
Q ss_pred HHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCch-hhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccC
Q 004092 207 KASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGT-LATRARNYASSGQLELLNDWKKVFNRATVVVFPD 285 (774)
Q Consensus 207 l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~-l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps 285 (774)
+..++...+||+|+++.-....+-..+. ....++|++. +|+.. .....+....+..+++ ++....|+
T Consensus 85 ~~~~~~~~~Pd~vlv~GD~~~~la~ala-A~~~~IPv~H-veaG~rs~~~~eE~~r~~i~~l----------a~l~f~~t 152 (365)
T TIGR03568 85 FSDAFERLKPDLVVVLGDRFEMLAAAIA-AALLNIPIAH-IHGGEVTEGAIDESIRHAITKL----------SHLHFVAT 152 (365)
T ss_pred HHHHHHHhCCCEEEEeCCchHHHHHHHH-HHHhCCcEEE-EECCccCCCCchHHHHHHHHHH----------HhhccCCC
Confidence 4555777999999999966532333333 3366799873 45421 1111111111111111 11111122
Q ss_pred Cc--chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCC-CEEEEEEecccc--cccccccHHHHHHHH
Q 004092 286 YV--LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPD-DLVIAIVGTQFM--YRGLWLEHALILRAL 360 (774)
Q Consensus 286 ~~--~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~-~~vIl~vGsrl~--~~KgiKg~~lLLeA~ 360 (774)
.. ......+.+..+++++-+.++|...... ...+..+.+++|++.+ +.+++.+- +.. +......+..+++++
T Consensus 153 ~~~~~~L~~eg~~~~~i~~tG~~~iD~l~~~~--~~~~~~~~~~lgl~~~~~~vlvt~H-p~~~~~~~~~~~l~~li~~L 229 (365)
T TIGR03568 153 EEYRQRVIQMGEDPDRVFNVGSPGLDNILSLD--LLSKEELEEKLGIDLDKPYALVTFH-PVTLEKESAEEQIKELLKAL 229 (365)
T ss_pred HHHHHHHHHcCCCCCcEEEECCcHHHHHHhhh--ccCHHHHHHHhCCCCCCCEEEEEeC-CCcccccCchHHHHHHHHHH
Confidence 22 1122345556677777666666422111 1124567788888754 44444444 332 321124455556666
Q ss_pred HHchhhcccCCCCCCCeEEEEE-eCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCC
Q 004092 361 LPLFSEVSVENESNSPIKVMIL-SGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQT 437 (774)
Q Consensus 361 ~~L~~~~p~~~~~~~~v~LvIv-GG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qG 437 (774)
..+. .+ +.++.- +++......+.++++.. . .+ +|.+++.. .++..+++.||++|.-|
T Consensus 230 ~~~~---~~-------~~vi~P~~~p~~~~i~~~i~~~~~--~-~~-~v~l~~~l~~~~~l~Ll~~a~~vitdS------ 289 (365)
T TIGR03568 230 DELN---KN-------YIFTYPNADAGSRIINEAIEEYVN--E-HP-NFRLFKSLGQERYLSLLKNADAVIGNS------ 289 (365)
T ss_pred HHhc---cC-------CEEEEeCCCCCchHHHHHHHHHhc--C-CC-CEEEECCCChHHHHHHHHhCCEEEEcC------
Confidence 5542 12 422221 23443223333433321 1 23 69999965 89999999999999655
Q ss_pred ccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHc
Q 004092 438 FPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITN 491 (774)
Q Consensus 438 fp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d 491 (774)
+..+.||.++|+|||+- +.-+|.+..|.+.+++. .|++++.+++.++ .+
T Consensus 290 -Sggi~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~vg-~~~~~I~~a~~~~-~~ 338 (365)
T TIGR03568 290 -SSGIIEAPSFGVPTINI--GTRQKGRLRADSVIDVD-PDKEEIVKAIEKL-LD 338 (365)
T ss_pred -hhHHHhhhhcCCCEEee--cCCchhhhhcCeEEEeC-CCHHHHHHHHHHH-hC
Confidence 22337999999999954 56778888888888784 4899999999994 45
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.59 E-value=8.1e-07 Score=106.46 Aligned_cols=185 Identities=14% Similarity=0.136 Sum_probs=133.9
Q ss_pred CCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCc----hHHHHHHHHHHcCCC
Q 004092 330 FKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSN----YSVVIEAIAHNLHYP 404 (774)
Q Consensus 330 l~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~----Y~~~L~~la~~lgL~ 404 (774)
++++.++|+++. |+... |+.+++++.+.++.+-.. +...+++++++| +..... +...+.+++++....
T Consensus 474 ldpd~ltigfar-Rfa~Y---KR~~Lil~dl~rl~~il~---~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~ 546 (778)
T cd04299 474 LDPNVLTIGFAR-RFATY---KRATLLLRDPERLKRLLN---DPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFR 546 (778)
T ss_pred cCCCccEEeeee-cchhh---hhHHHHHHHHHHHHHHhh---CCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCC
Confidence 445666777777 88777 999999999888854210 111348999999 643322 333455555544566
Q ss_pred CccEEEc-cCcccH-HHHHHHcCEEEEcCc--cCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcC-----
Q 004092 405 LGVVKHM-AAEGDV-DSVLNTADVVIYGSF--LEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPK----- 475 (774)
Q Consensus 405 ~~~V~fl-G~~~dl-~~~l~aaDI~V~PS~--~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~----- 475 (774)
+ +|.|+ ++...+ ..+++.||+.+.||. .| ..|.+=+-||..|.+-+++--|...|.. ++.|||.+.+
T Consensus 547 ~-kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~E--AsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~ 622 (778)
T cd04299 547 G-RIVFLEDYDMALARHLVQGVDVWLNTPRRPLE--ASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYE 622 (778)
T ss_pred C-cEEEEcCCCHHHHHHHHhhhhhcccCCCCCCC--CCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCcccc
Confidence 6 67776 565444 568899999999999 88 4777889999999999999998888877 7889999988
Q ss_pred -------CCHHHHHHHHHHHHH----c---CCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 004092 476 -------ENIKALTHIILQVIT----N---GKISPFARNIASIGRRSV-KNLMALETIEGYAMLL 525 (774)
Q Consensus 476 -------~d~e~La~aI~~Ll~----d---~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~ 525 (774)
.|+++|.+.|.+-+- + +-+|..+.+|.+++.... ..|++.+|+..|.+-+
T Consensus 623 ~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 623 DDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred ChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 566777777754332 2 013566777777777665 6899999999997754
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.59 E-value=2e-06 Score=97.28 Aligned_cols=182 Identities=9% Similarity=0.039 Sum_probs=121.8
Q ss_pred HHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCC
Q 004092 324 VRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHY 403 (774)
Q Consensus 324 lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL 403 (774)
.|+.+|++++.+++.++. + .. |-.+..++++.++.+..|+ .+|++...+.. -.+.+++.+++.|+
T Consensus 275 ~R~~~gLp~d~vvF~~fn-~--~~---KI~p~~l~~W~~IL~~vP~-------S~L~L~~~~~~--~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 275 TRAQYGLPEDAVVFGSFN-N--LF---KISPETLDLWARILKAVPN-------SRLWLLRFPAS--GEARLRRRFAAHGV 339 (468)
T ss_dssp ETGGGT--SSSEEEEE-S----GG---G--HHHHHHHHHHHHHSTT-------EEEEEEETSTT--HHHHHHHHHHHTTS
T ss_pred CHHHcCCCCCceEEEecC-c--cc---cCCHHHHHHHHHHHHhCCC-------cEEEEeeCCHH--HHHHHHHHHHHcCC
Confidence 478999999986666666 2 22 6677889999999999999 89988874332 23778889999999
Q ss_pred CCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccc-----cc-ccCccEEEEcC
Q 004092 404 PLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRK-----YV-DDRVNGYLFPK 475 (774)
Q Consensus 404 ~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~E-----iV-~dg~~G~Lv~~ 475 (774)
..++|.|.+.. ++-...++.+||++=+..+. -+.+.+||+.+|+|||+-.-..... ++ .=|..-++.
T Consensus 340 ~~~Ri~f~~~~~~~ehl~~~~~~DI~LDT~p~n---G~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA-- 414 (468)
T PF13844_consen 340 DPDRIIFSPVAPREEHLRRYQLADICLDTFPYN---GGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA-- 414 (468)
T ss_dssp -GGGEEEEE---HHHHHHHGGG-SEEE--SSS-----SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB---
T ss_pred ChhhEEEcCCCCHHHHHHHhhhCCEEeeCCCCC---CcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC--
Confidence 87799999854 45556778899999886554 4889999999999999965332211 11 111122233
Q ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-Hh--cCHHHHHHHHHHHHHHH
Q 004092 476 ENIKALTHIILQVITNGKISPFARNIASIGRRSV-KN--LMALETIEGYAMLLENV 528 (774)
Q Consensus 476 ~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~--fs~~~~a~~y~~L~e~l 528 (774)
.|.+++.+.-.++.+| ++.++++.+.-++.. +. |+....+..+++.|+.+
T Consensus 415 ~s~~eYv~~Av~La~D---~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 DSEEEYVEIAVRLATD---PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp SSHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 3789999999999999 999999998887766 32 88889999999888764
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.9e-05 Score=86.48 Aligned_cols=81 Identities=20% Similarity=0.265 Sum_probs=61.4
Q ss_pred CCCccEEEccCc-ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccc------ccccCccEEEEcC
Q 004092 403 YPLGVVKHMAAE-GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRK------YVDDRVNGYLFPK 475 (774)
Q Consensus 403 L~~~~V~flG~~-~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~E------iV~dg~~G~Lv~~ 475 (774)
+.+ ++.+.++. +++.++|..||++|.-+ |+ .++.||+++|+|+|..+..+..| .+.+...|...+.
T Consensus 227 ~~~-~v~~~~~~~~~~~~~l~~ad~vI~~~-----G~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~ 299 (321)
T TIGR00661 227 YNE-NVEIRRITTDNFKELIKNAELVITHG-----GF-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEY 299 (321)
T ss_pred cCC-CEEEEECChHHHHHHHHhCCEEEECC-----Ch-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcCh
Confidence 345 79998988 58999999999999876 23 36999999999999988876444 3445455888887
Q ss_pred CCHHHHHHHHHHHHHc
Q 004092 476 ENIKALTHIILQVITN 491 (774)
Q Consensus 476 ~d~e~La~aI~~Ll~d 491 (774)
.+. ++.+++...+++
T Consensus 300 ~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 300 KEL-RLLEAILDIRNM 314 (321)
T ss_pred hhH-HHHHHHHhcccc
Confidence 777 566666666655
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=98.49 E-value=4e-07 Score=87.07 Aligned_cols=143 Identities=17% Similarity=0.146 Sum_probs=75.4
Q ss_pred ChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc------------hhHHHHh--hhcCccEEEEc
Q 004092 157 DPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG------------REKASFV--NWLNYDGILVN 222 (774)
Q Consensus 157 GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~------------~~l~~~i--~~~~~DIIhvh 222 (774)
||+++++.++++.|.++||+|+|++....+........++++..++.. ..+...+ ...+||+||+|
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Dvv~~~ 80 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDEEEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRERPDVVHAH 80 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-SEEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT---SEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccccccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhccCCeEEEec
Confidence 899999999999999999999999987655443333445555443322 2234445 66899999999
Q ss_pred CCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc--hhhcccCCCCCE
Q 004092 223 SLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL--PMMYSAFDAGNY 300 (774)
Q Consensus 223 s~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~--~~i~~~v~~~ki 300 (774)
++.. ..+..++. ...++|+|+++|+...... ...... ......+..+..++.+++++... .+...+++.+++
T Consensus 81 ~~~~-~~~~~~~~-~~~~~p~v~~~h~~~~~~~-~~~~~~---~~~~~~~~~~~~ad~vi~~S~~~~~~l~~~g~~~~ri 154 (160)
T PF13579_consen 81 SPTA-GLVAALAR-RRRGIPLVVTVHGTLFRRG-SRWKRR---LYRWLERRLLRRADRVIVVSEAMRRYLRRYGVPPDRI 154 (160)
T ss_dssp HHHH-HHHHHHHH-HHHT--EEEE-SS-T-------HHHH---HHHHHHHHHHHH-SEEEESSHHHHHHHHHH---GGGE
T ss_pred ccch-hHHHHHHH-HccCCcEEEEECCCchhhc-cchhhH---HHHHHHHHHHhcCCEEEECCHHHHHHHHHhCCCCCcE
Confidence 9654 34454443 2457999999997432211 111111 11123445777888887776662 222345667788
Q ss_pred EEeCC
Q 004092 301 YVIPG 305 (774)
Q Consensus 301 ~vIpg 305 (774)
.+|||
T Consensus 155 ~vipn 159 (160)
T PF13579_consen 155 HVIPN 159 (160)
T ss_dssp EE---
T ss_pred EEeCc
Confidence 88884
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.2e-05 Score=85.32 Aligned_cols=117 Identities=14% Similarity=0.140 Sum_probs=79.9
Q ss_pred CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEc
Q 004092 332 PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHM 411 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~fl 411 (774)
+.+.+++++| -... . .++++++.+. + ..++++|....+ .... +|.+.
T Consensus 191 ~~~~iLv~~g-g~~~----~---~~~~~l~~~~----~-------~~~~v~g~~~~~-------------~~~~-ni~~~ 237 (318)
T PF13528_consen 191 DEPKILVYFG-GGGP----G---DLIEALKALP----D-------YQFIVFGPNAAD-------------PRPG-NIHVR 237 (318)
T ss_pred CCCEEEEEeC-CCcH----H---HHHHHHHhCC----C-------CeEEEEcCCccc-------------ccCC-CEEEe
Confidence 4566888888 3333 2 5567776644 3 688888832211 1133 79999
Q ss_pred cCc-ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccc------cccCccEEEEcC--CCHHHHH
Q 004092 412 AAE-GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKY------VDDRVNGYLFPK--ENIKALT 482 (774)
Q Consensus 412 G~~-~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~Ei------V~dg~~G~Lv~~--~d~e~La 482 (774)
++. .++.++|++||++|...- -.+++||+++|+|+|.-+..+..|. +..-..|..++. -+++.|+
T Consensus 238 ~~~~~~~~~~m~~ad~vIs~~G------~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~ 311 (318)
T PF13528_consen 238 PFSTPDFAELMAAADLVISKGG------YTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLA 311 (318)
T ss_pred ecChHHHHHHHHhCCEEEECCC------HHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHH
Confidence 987 899999999999997752 2369999999999999887665443 333334656543 3578888
Q ss_pred HHHHH
Q 004092 483 HIILQ 487 (774)
Q Consensus 483 ~aI~~ 487 (774)
++|.+
T Consensus 312 ~~l~~ 316 (318)
T PF13528_consen 312 EFLER 316 (318)
T ss_pred HHHhc
Confidence 88765
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.1e-05 Score=81.64 Aligned_cols=278 Identities=13% Similarity=0.115 Sum_probs=158.6
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccch---------------hHHHHhhhcCccEEEEc
Q 004092 158 PQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGR---------------EKASFVNWLNYDGILVN 222 (774)
Q Consensus 158 G~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~---------------~l~~~i~~~~~DIIhvh 222 (774)
..-.....+++.|.+.||+|.|.+...+.....++..|++...+.... ++.++++..+||+++++
T Consensus 11 ~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~~R~~~l~~~~~~~~pDv~is~ 90 (335)
T PF04007_consen 11 AHVHFFKNIIRELEKRGHEVLITARDKDETEELLDLYGIDYIVIGKHGDSLYGKLLESIERQYKLLKLIKKFKPDVAISF 90 (335)
T ss_pred hHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCCeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEec
Confidence 355667789999999999999999888777778888888866554321 23344566899999877
Q ss_pred CCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCC-CCEE
Q 004092 223 SLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDA-GNYY 301 (774)
Q Consensus 223 s~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~-~ki~ 301 (774)
+......++.. .++|.|....+.... .. .+-.+..++.+..|...-......+.. .++.
T Consensus 91 ~s~~a~~va~~-----lgiP~I~f~D~e~a~-~~--------------~~Lt~Pla~~i~~P~~~~~~~~~~~G~~~~i~ 150 (335)
T PF04007_consen 91 GSPEAARVAFG-----LGIPSIVFNDTEHAI-AQ--------------NRLTLPLADVIITPEAIPKEFLKRFGAKNQIR 150 (335)
T ss_pred CcHHHHHHHHH-----hCCCeEEEecCchhh-cc--------------ceeehhcCCeeECCcccCHHHHHhcCCcCCEE
Confidence 65543234433 347988877742111 00 111223445555553221111111111 2343
Q ss_pred EeCCCCCCcccc-cccCchhhHHHHHHhCCCCCCEEEEEEec-ccccccccccHHHHHHHHHHchhhcccCCCCCCCeEE
Q 004092 302 VIPGSPAKAWEA-DTNMDLYNDTVRVKMGFKPDDLVIAIVGT-QFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKV 379 (774)
Q Consensus 302 vIpg~gvd~~~~-~~~~~~~k~~lR~~lgl~~~~~vIl~vGs-rl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~L 379 (774)
..+| ++...+ .++.+ ...+.+++|+++++.+++=... .-.+.+|-+ ..+-+.+..|.+. .+ . +
T Consensus 151 ~y~G--~~E~ayl~~F~P--d~~vl~~lg~~~~~yIvvR~~~~~A~y~~~~~--~i~~~ii~~L~~~-~~-------~-v 215 (335)
T PF04007_consen 151 TYNG--YKELAYLHPFKP--DPEVLKELGLDDEPYIVVRPEAWKASYDNGKK--SILPEIIEELEKY-GR-------N-V 215 (335)
T ss_pred EECC--eeeEEeecCCCC--ChhHHHHcCCCCCCEEEEEeccccCeeecCcc--chHHHHHHHHHhh-Cc-------e-E
Confidence 3443 332111 12222 3567789998877665554432 222332312 2234555555543 22 3 5
Q ss_pred EEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCc
Q 004092 380 MILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLS 458 (774)
Q Consensus 380 vIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g 458 (774)
+++. .... ..+.+.. .+.+....-+..+++..||++|.- -|....||..+|+|.|++..+
T Consensus 216 V~ipr~~~~-------~~~~~~~-----~~~i~~~~vd~~~Ll~~a~l~Ig~-------ggTMa~EAA~LGtPaIs~~~g 276 (335)
T PF04007_consen 216 VIIPRYEDQ-------RELFEKY-----GVIIPPEPVDGLDLLYYADLVIGG-------GGTMAREAALLGTPAISCFPG 276 (335)
T ss_pred EEecCCcch-------hhHHhcc-----CccccCCCCCHHHHHHhcCEEEeC-------CcHHHHHHHHhCCCEEEecCC
Confidence 5555 2221 1222321 144444344677899999999954 356778999999999997543
Q ss_pred ---ccccccccCccEEEEcCCCHHHHHHHHHHHHHc
Q 004092 459 ---NIRKYVDDRVNGYLFPKENIKALTHIILQVITN 491 (774)
Q Consensus 459 ---gi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d 491 (774)
+..+++.+ .|+++...|++++.+.+...+..
T Consensus 277 ~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~~~~~ 310 (335)
T PF04007_consen 277 KLLAVDKYLIE--KGLLYHSTDPDEIVEYVRKNLGK 310 (335)
T ss_pred cchhHHHHHHH--CCCeEecCCHHHHHHHHHHhhhc
Confidence 33345544 48899989999998866655443
|
They are found in archaea and some bacteria and have no known function. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.4e-05 Score=85.75 Aligned_cols=299 Identities=14% Similarity=0.129 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEEcCCCcchh----------hhhhcCcc--EEEc----ccchhHHHHhhhcCccEEEEc
Q 004092 159 QQLQMVTIAIALREIGYAIQVYSLEDGRAHE----------VWRNIGVP--VAIL----QTGREKASFVNWLNYDGILVN 222 (774)
Q Consensus 159 ~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~----------~~~~~gi~--i~~l----~~~~~l~~~i~~~~~DIIhvh 222 (774)
+..+...|+++|+++.-++.++..++..... .+..+|+- +..+ ...+.+...+...+||+++.-
T Consensus 10 GD~~ga~Li~~Lk~~~p~~~~~GvGG~~M~~~G~~~l~d~~~lsvmG~~Evl~~l~~~~~~~~~~~~~~~~~~pd~vIlI 89 (373)
T PF02684_consen 10 GDLHGARLIRALKARDPDIEFYGVGGPRMQAAGVESLFDMEELSVMGFVEVLKKLPKLKRLFRKLVERIKEEKPDVVILI 89 (373)
T ss_pred HHHHHHHHHHHHHhhCCCcEEEEEechHHHhCCCceecchHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 3567889999999998888888776543221 11112211 0001 111233344566899988865
Q ss_pred C-CchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHH--hhhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCC
Q 004092 223 S-LEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARN--YASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGN 299 (774)
Q Consensus 223 s-~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k--~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~k 299 (774)
. |....-++..+.+...++|+|+.+--.-+.++..+ ...+..|.++ ..||=..-.....+ -+
T Consensus 90 D~pgFNlrlak~lk~~~~~~~viyYI~PqvWAWr~~R~~~i~~~~D~ll------------~ifPFE~~~y~~~g---~~ 154 (373)
T PF02684_consen 90 DYPGFNLRLAKKLKKRGIPIKVIYYISPQVWAWRPGRAKKIKKYVDHLL------------VIFPFEPEFYKKHG---VP 154 (373)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEECCceeeeCccHHHHHHHHHhhee------------ECCcccHHHHhccC---CC
Confidence 4 44433444444333333347776652222211111 1111122221 12221110000111 12
Q ss_pred EEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCE-EEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeE
Q 004092 300 YYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDL-VIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIK 378 (774)
Q Consensus 300 i~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~-vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~ 378 (774)
..++- .|.-. ...........++.+ ++++++ +.+..|||-..- -+.+..+++++..+.+++|+ ++
T Consensus 155 ~~~VG-HPl~d---~~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI--~rllP~~l~aa~~l~~~~p~-------l~ 220 (373)
T PF02684_consen 155 VTYVG-HPLLD---EVKPEPDRAEAREKL-LDPDKPIIALLPGSRKSEI--KRLLPIFLEAAKLLKKQRPD-------LQ 220 (373)
T ss_pred eEEEC-Ccchh---hhccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHH--HHHHHHHHHHHHHHHHhCCC-------eE
Confidence 23332 22211 011111134455566 666555 667778876653 14558889999999999998 99
Q ss_pred EEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcC-C
Q 004092 379 VMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPD-L 457 (774)
Q Consensus 379 LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd-~ 457 (774)
+++..-+.. +.+.+++.....+... .+... ..+-.+.|++||+.+..| |.+.+||+.+|+|.|... .
T Consensus 221 fvvp~a~~~--~~~~i~~~~~~~~~~~-~~~~~--~~~~~~~m~~ad~al~~S-------GTaTLE~Al~g~P~Vv~Yk~ 288 (373)
T PF02684_consen 221 FVVPVAPEV--HEELIEEILAEYPPDV-SIVII--EGESYDAMAAADAALAAS-------GTATLEAALLGVPMVVAYKV 288 (373)
T ss_pred EEEecCCHH--HHHHHHHHHHhhCCCC-eEEEc--CCchHHHHHhCcchhhcC-------CHHHHHHHHhCCCEEEEEcC
Confidence 998873321 1234555555444433 23322 347788999999999887 778999999999987632 2
Q ss_pred c----------------ccccccccCcc--EEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHH
Q 004092 458 S----------------NIRKYVDDRVN--GYLFPKENIKALTHIILQVITNGKISPFARNI 501 (774)
Q Consensus 458 g----------------gi~EiV~dg~~--G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m 501 (774)
. +++.++.+... =++-+..+++.+++++..++.| ++.++..
T Consensus 289 ~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~---~~~~~~~ 347 (373)
T PF02684_consen 289 SPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLEN---PEKRKKQ 347 (373)
T ss_pred cHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcC---HHHHHHH
Confidence 2 33444433220 0122235799999999999999 7664443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.6e-05 Score=83.25 Aligned_cols=315 Identities=14% Similarity=0.127 Sum_probs=171.5
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcch----------hhhhhcCcc------EEEcccchhHH
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAH----------EVWRNIGVP------VAILQTGREKA 208 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~----------~~~~~~gi~------i~~l~~~~~l~ 208 (774)
++|+++.+..+. ..+-..|.++|+++=-++.++-.++.... ..+..+|+. ...+...+++.
T Consensus 2 ~ki~i~AGE~SG---DllGa~LikaLk~~~~~~efvGvgG~~m~aeG~~sl~~~~elsvmGf~EVL~~lp~llk~~~~~~ 78 (381)
T COG0763 2 LKIALSAGEASG---DLLGAGLIKALKARYPDVEFVGVGGEKMEAEGLESLFDMEELSVMGFVEVLGRLPRLLKIRRELV 78 (381)
T ss_pred ceEEEEecccch---hhHHHHHHHHHHhhCCCeEEEEeccHHHHhccCccccCHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 567777665432 34556778888876337777766542211 111222221 01111223334
Q ss_pred HHhhhcCccEEEEc-CCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHH--hhhhhhhHHHHHHHHHHHhccEEEccC
Q 004092 209 SFVNWLNYDGILVN-SLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARN--YASSGQLELLNDWKKVFNRATVVVFPD 285 (774)
Q Consensus 209 ~~i~~~~~DIIhvh-s~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k--~~~~~~~~li~~~~~~~~~a~~vv~ps 285 (774)
+.+...+||++++- +|...-.+...+.+...++|+|+.+--..+.++..+ ...+..|.++. .+|=
T Consensus 79 ~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~~Ra~~i~~~~D~lLa------------ilPF 146 (381)
T COG0763 79 RYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRPKRAVKIAKYVDHLLA------------ILPF 146 (381)
T ss_pred HHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeeechhhHHHHHHHhhHeee------------ecCC
Confidence 44556899988765 454443444445444456888876663333322211 11112222211 2221
Q ss_pred CcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCC-EEEEEEecccccccccccHHHHHHHHHHch
Q 004092 286 YVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDD-LVIAIVGTQFMYRGLWLEHALILRALLPLF 364 (774)
Q Consensus 286 ~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~-~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~ 364 (774)
..- .|...... ..++-..-.|. .+ -...++..|++++++.+. .+.+..|||-+.- -.....+++|+..+.
T Consensus 147 E~~--~y~k~g~~-~~yVGHpl~d~---i~-~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI--~rl~~~f~~a~~~l~ 217 (381)
T COG0763 147 EPA--FYDKFGLP-CTYVGHPLADE---IP-LLPDREAAREKLGIDADEKTLALLPGSRRSEI--RRLLPPFVQAAQELK 217 (381)
T ss_pred CHH--HHHhcCCC-eEEeCChhhhh---cc-ccccHHHHHHHhCCCCCCCeEEEecCCcHHHH--HHHHHHHHHHHHHHH
Confidence 111 11111111 22222111111 11 122356689999998765 5667778776552 155677889999999
Q ss_pred hhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHH
Q 004092 365 SEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILV 443 (774)
Q Consensus 365 ~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~ll 443 (774)
+++|+ +++++-- .+. |+....+..+...... .+.+.+ .+-.+.+.+||+.+..| |.+.+
T Consensus 218 ~~~~~-------~~~vlp~~~~~---~~~~~~~~~~~~~~~~-~~~~~~--~~~~~a~~~aD~al~aS-------GT~tL 277 (381)
T COG0763 218 ARYPD-------LKFVLPLVNAK---YRRIIEEALKWEVAGL-SLILID--GEKRKAFAAADAALAAS-------GTATL 277 (381)
T ss_pred hhCCC-------ceEEEecCcHH---HHHHHHHHhhccccCc-eEEecC--chHHHHHHHhhHHHHhc-------cHHHH
Confidence 99998 8998877 333 2233333333222212 233332 36678999999999877 77999
Q ss_pred HHHHcCCCEEEcC-----------------CcccccccccCccEEEEc-----CCCHHHHHHHHHHHHHcCCCcHHHHHH
Q 004092 444 KALCFRKPIIAPD-----------------LSNIRKYVDDRVNGYLFP-----KENIKALTHIILQVITNGKISPFARNI 501 (774)
Q Consensus 444 EAMA~G~PVIatd-----------------~ggi~EiV~dg~~G~Lv~-----~~d~e~La~aI~~Ll~d~~~~~~r~~m 501 (774)
|+|.+|+|.|++. +-+.+.++.+.. ++| .-.++.+++++..++.| +..++++
T Consensus 278 E~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~---ivPEliq~~~~pe~la~~l~~ll~~---~~~~~~~ 351 (381)
T COG0763 278 EAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGRE---IVPELIQEDCTPENLARALEELLLN---GDRREAL 351 (381)
T ss_pred HHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCc---cchHHHhhhcCHHHHHHHHHHHhcC---hHhHHHH
Confidence 9999999987642 223444444322 222 23589999999999999 6566666
Q ss_pred HHHHHHHH
Q 004092 502 ASIGRRSV 509 (774)
Q Consensus 502 ~~~ar~~a 509 (774)
.+...+..
T Consensus 352 ~~~~~~l~ 359 (381)
T COG0763 352 KEKFRELH 359 (381)
T ss_pred HHHHHHHH
Confidence 55544444
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.27 E-value=2e-05 Score=74.78 Aligned_cols=100 Identities=13% Similarity=0.164 Sum_probs=67.9
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc----------hhHHHHhhhcC
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG----------REKASFVNWLN 215 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~----------~~l~~~i~~~~ 215 (774)
||+++.... +.++.++++.|.+.||+|++++..++. .......++.+..++.. ..+.++++..+
T Consensus 1 KIl~i~~~~-----~~~~~~~~~~L~~~g~~V~ii~~~~~~-~~~~~~~~i~~~~~~~~~k~~~~~~~~~~l~k~ik~~~ 74 (139)
T PF13477_consen 1 KILLIGNTP-----STFIYNLAKELKKRGYDVHIITPRNDY-EKYEIIEGIKVIRLPSPRKSPLNYIKYFRLRKIIKKEK 74 (139)
T ss_pred CEEEEecCc-----HHHHHHHHHHHHHCCCEEEEEEcCCCc-hhhhHhCCeEEEEecCCCCccHHHHHHHHHHHHhccCC
Confidence 355555544 457899999999999999999996543 22222344444444311 13455677889
Q ss_pred ccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCch
Q 004092 216 YDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGT 251 (774)
Q Consensus 216 ~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~ 251 (774)
||+||+|.+.....++.++......+|+|++.||..
T Consensus 75 ~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~ 110 (139)
T PF13477_consen 75 PDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSD 110 (139)
T ss_pred CCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCe
Confidence 999999998764466666654333489999999854
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00036 Score=76.60 Aligned_cols=322 Identities=12% Similarity=0.101 Sum_probs=182.5
Q ss_pred CCeEEEEecCCCCChHHHHHHHHHHHHHHcC-CeEEEEEcCC-C--cc-hhhhhhcCcc--EEEcccc------------
Q 004092 144 KPQLALVFPDLLIDPQQLQMVTIAIALREIG-YAIQVYSLED-G--RA-HEVWRNIGVP--VAILQTG------------ 204 (774)
Q Consensus 144 k~rialV~~~L~~GG~e~~v~~Lak~L~~~G-~eV~V~t~~~-~--~~-~~~~~~~gi~--i~~l~~~------------ 204 (774)
+.||+.|++. -.--.-+..+.+++.+.+ .+..|+..+. - +. ...++..+++ .+.+...
T Consensus 3 ~~Kv~~I~GT---RPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~~~tl~~~t~~ 79 (383)
T COG0381 3 MLKVLTIFGT---RPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKPGQTLGEITGN 79 (383)
T ss_pred ceEEEEEEec---CHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhccccCCCHHHHHHH
Confidence 5678888773 344456777888998887 7777766543 1 21 1233444443 2222211
Q ss_pred --hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchh--hhhHHHhhhhhhhHHHHHHHHHHHhccE
Q 004092 205 --REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTL--ATRARNYASSGQLELLNDWKKVFNRATV 280 (774)
Q Consensus 205 --~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l--~~~~~k~~~~~~~~li~~~~~~~~~a~~ 280 (774)
..+.+++...+||+|.+|.-....+...+.+ ...++|+...-=|.-. .+.-+.......+. ++ .
T Consensus 80 ~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa-~~~~IpV~HvEAGlRt~~~~~PEE~NR~l~~~-~S----------~ 147 (383)
T COG0381 80 IIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAA-FYLKIPVGHVEAGLRTGDLYFPEEINRRLTSH-LS----------D 147 (383)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHH-HHhCCceEEEecccccCCCCCcHHHHHHHHHH-hh----------h
Confidence 1245557779999999999877433334443 3567887654433111 11112222221111 11 1
Q ss_pred EEc-cCCc--chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHH-hCCCCCCEEEEEEecccccccccccHHHH
Q 004092 281 VVF-PDYV--LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVK-MGFKPDDLVIAIVGTQFMYRGLWLEHALI 356 (774)
Q Consensus 281 vv~-ps~~--~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~-lgl~~~~~vIl~vGsrl~~~KgiKg~~lL 356 (774)
+.| |+.. --....+++.++++++-+.-+|.................. ++...++.+++..-++-... +++..+
T Consensus 148 ~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~~~~~iLvT~HRreN~~---~~~~~i 224 (383)
T COG0381 148 LHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDKDKKYILVTAHRRENVG---EPLEEI 224 (383)
T ss_pred hhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhccccCcEEEEEcchhhccc---ccHHHH
Confidence 111 1111 1223446666778777654444422110001101111222 44455555555555333333 888888
Q ss_pred HHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHH-HHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCcc
Q 004092 357 LRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIA-HNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFL 433 (774)
Q Consensus 357 LeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la-~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~ 433 (774)
++|+.++.+++++ +.++.---+. ..+++.. ..++-.+ +|.++... .+...++..|-+++.=|
T Consensus 225 ~~al~~i~~~~~~-------~~viyp~H~~-----~~v~e~~~~~L~~~~-~v~li~pl~~~~f~~L~~~a~~iltDS-- 289 (383)
T COG0381 225 CEALREIAEEYPD-------VIVIYPVHPR-----PRVRELVLKRLKNVE-RVKLIDPLGYLDFHNLMKNAFLILTDS-- 289 (383)
T ss_pred HHHHHHHHHhCCC-------ceEEEeCCCC-----hhhhHHHHHHhCCCC-cEEEeCCcchHHHHHHHHhceEEEecC--
Confidence 9999999999877 5555444222 2233444 4445444 68888766 67788888887777655
Q ss_pred CcCCccHHHHHHHHcCCCEEEcCC-cccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 004092 434 EEQTFPEILVKALCFRKPIIAPDL-SNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRS 508 (774)
Q Consensus 434 E~qGfp~~llEAMA~G~PVIatd~-ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ 508 (774)
|...=||-.+|+||++-.. ..-+|-++.|. -.++.. +.+.+.+++..++++ ++..++|+....-+
T Consensus 290 -----GgiqEEAp~lg~Pvl~lR~~TERPE~v~agt-~~lvg~-~~~~i~~~~~~ll~~---~~~~~~m~~~~npY 355 (383)
T COG0381 290 -----GGIQEEAPSLGKPVLVLRDTTERPEGVEAGT-NILVGT-DEENILDAATELLED---EEFYERMSNAKNPY 355 (383)
T ss_pred -----CchhhhHHhcCCcEEeeccCCCCccceecCc-eEEeCc-cHHHHHHHHHHHhhC---hHHHHHHhcccCCC
Confidence 3344499999999988544 34567666554 456654 679999999999999 88888886654333
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00026 Score=82.32 Aligned_cols=314 Identities=10% Similarity=0.050 Sum_probs=165.5
Q ss_pred CCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchh----------hhhhcCccEEEcc-------cchh
Q 004092 144 KPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHE----------VWRNIGVPVAILQ-------TGRE 206 (774)
Q Consensus 144 k~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~----------~~~~~gi~i~~l~-------~~~~ 206 (774)
.+++.++.+..+ +..+.-.|+++|+++.-++.+...++..... .....|+- ..++ ..++
T Consensus 226 ~~kIfI~AGE~S---GDlhgA~Li~aLk~~~P~i~~~GvGG~~M~aaG~e~l~d~~eLsVmG~~-EVL~~l~~l~~~~~~ 301 (608)
T PRK01021 226 NTSCFISAGEHS---GDTLGGNLLKEIKALYPDIHCFGVGGPQMRAEGFHPLFNMEEFQVSGFW-EVLLALFKLWYRYRK 301 (608)
T ss_pred CCeEEEEecccc---HHHHHHHHHHHHHhcCCCcEEEEEccHHHHhCcCcccCChHHhhhhhHH-HHHHHHHHHHHHHHH
Confidence 467777776543 3467778899999987788877665533221 11111111 1111 1123
Q ss_pred HHHHhhhcCccEEEE-cCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHH--HhhhhhhhHHHHHHHHHHHhccEEEc
Q 004092 207 KASFVNWLNYDGILV-NSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRAR--NYASSGQLELLNDWKKVFNRATVVVF 283 (774)
Q Consensus 207 l~~~i~~~~~DIIhv-hs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~--k~~~~~~~~li~~~~~~~~~a~~vv~ 283 (774)
+.+.+...+||++++ .+|...--++..+.+...++|+|+.+--.-..++.. +...+..|.+++ .+
T Consensus 302 l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWAWR~~Rikki~k~vD~ll~------------If 369 (608)
T PRK01021 302 LYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWAWRPKRKTILEKYLDLLLL------------IL 369 (608)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCcchHHHHHHHhhhhee------------cC
Confidence 334455689999887 455554334444433211248887665322222111 111122222222 12
Q ss_pred cCCcchhhcccCCCCCEEEeCCCCC-CcccccccCchhhHHHHHHhCCCCC-CEEEEEEeccccc-ccccccHHHHHHHH
Q 004092 284 PDYVLPMMYSAFDAGNYYVIPGSPA-KAWEADTNMDLYNDTVRVKMGFKPD-DLVIAIVGTQFMY-RGLWLEHALILRAL 360 (774)
Q Consensus 284 ps~~~~~i~~~v~~~ki~vIpg~gv-d~~~~~~~~~~~k~~lR~~lgl~~~-~~vIl~vGsrl~~-~KgiKg~~lLLeA~ 360 (774)
|=+.-.....+ -++..+- .|. |. ......++..++++|++++ ..+.+..|||... . ...+.+++|+
T Consensus 370 PFE~~~y~~~g---v~v~yVG-HPL~d~----i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~---rllPv~l~aa 438 (608)
T PRK01021 370 PFEQNLFKDSP---LRTVYLG-HPLVET----ISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDIL---RNLTIQVQAF 438 (608)
T ss_pred ccCHHHHHhcC---CCeEEEC-CcHHhh----cccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHH---HHHHHHHHHH
Confidence 21110000111 1222222 222 21 0011224567888999755 5566888988655 4 5667788888
Q ss_pred H--HchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCc
Q 004092 361 L--PLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTF 438 (774)
Q Consensus 361 ~--~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGf 438 (774)
. .+.+ + .++++...+.. +.+.+++..+..++.. +.+... ++-.+++++||+.+..|
T Consensus 439 ~~~~l~~---~-------l~fvvp~a~~~--~~~~i~~~~~~~~~~~--~~ii~~-~~~~~~m~aaD~aLaaS------- 496 (608)
T PRK01021 439 LASSLAS---T-------HQLLVSSANPK--YDHLILEVLQQEGCLH--SHIVPS-QFRYELMRECDCALAKC------- 496 (608)
T ss_pred HHHHhcc---C-------eEEEEecCchh--hHHHHHHHHhhcCCCC--eEEecC-cchHHHHHhcCeeeecC-------
Confidence 7 4433 2 67777553221 2355666665333212 333321 13479999999999887
Q ss_pred cHHHHHHHHcCCCEEEc-CCc------------------ccccccccCc-cEEEE---cCCCHHHHHHHHHHHHHcCCCc
Q 004092 439 PEILVKALCFRKPIIAP-DLS------------------NIRKYVDDRV-NGYLF---PKENIKALTHIILQVITNGKIS 495 (774)
Q Consensus 439 p~~llEAMA~G~PVIat-d~g------------------gi~EiV~dg~-~G~Lv---~~~d~e~La~aI~~Ll~d~~~~ 495 (774)
|.+.+||+.+|+|.|.. ..+ +.+.++.+.+ ---+. +.-+++.+++++ +++.| +
T Consensus 497 GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d---~ 572 (608)
T PRK01021 497 GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKT---S 572 (608)
T ss_pred CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcC---H
Confidence 77899999999998763 222 2222332221 00122 234799999996 88888 7
Q ss_pred HHHHHHHHHHHHHHH
Q 004092 496 PFARNIASIGRRSVK 510 (774)
Q Consensus 496 ~~r~~m~~~ar~~ak 510 (774)
+.++++.+...+..+
T Consensus 573 ~~r~~~~~~l~~lr~ 587 (608)
T PRK01021 573 QSKEKQKDACRDLYQ 587 (608)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777776665554443
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.0082 Score=70.00 Aligned_cols=163 Identities=14% Similarity=0.122 Sum_probs=98.5
Q ss_pred CCCEEEEEEecccccccc-cccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeC-CCCCchHHHHHHHHHHcCCCCccEE
Q 004092 332 PDDLVIAIVGTQFMYRGL-WLEHALILRALLPLFSEVSVENESNSPIKVMILSG-DSTSNYSVVIEAIAHNLHYPLGVVK 409 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~Kg-iKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG-~~~e~Y~~~L~~la~~lgL~~~~V~ 409 (774)
++..+++.+|+.....+. -.-...+++|++.+. .++++..+ ...+ .++++ +|.
T Consensus 295 ~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~------------~~viw~~~~~~~~------------~~~p~-Nv~ 349 (507)
T PHA03392 295 TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP------------YNVLWKYDGEVEA------------INLPA-NVL 349 (507)
T ss_pred CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC------------CeEEEEECCCcCc------------ccCCC-ceE
Confidence 345788888864332101 033455666766554 35555443 2220 14666 899
Q ss_pred EccCcccHHHHH--HHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCC--CHHHH
Q 004092 410 HMAAEGDVDSVL--NTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKE--NIKAL 481 (774)
Q Consensus 410 flG~~~dl~~~l--~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~--d~e~L 481 (774)
+.++..+ .+++ ..+++||.- |-.+++.||+.+|+|+|+-+..+ ....+.....|...+.. +.+++
T Consensus 350 i~~w~Pq-~~lL~hp~v~~fItH------GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l 422 (507)
T PHA03392 350 TQKWFPQ-RAVLKHKNVKAFVTQ------GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQL 422 (507)
T ss_pred EecCCCH-HHHhcCCCCCEEEec------CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHH
Confidence 9998743 5677 458888853 34668899999999999976543 23334344458777653 67899
Q ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHhcCC
Q 004092 482 THIILQVITNGKISPFARNIASIGRRSVK-NLMALETIEGYAMLLENVLKLP 532 (774)
Q Consensus 482 a~aI~~Ll~d~~~~~~r~~m~~~ar~~ak-~fs~~~~a~~y~~L~e~ll~~~ 532 (774)
.++|.++++| +..+++..+-+..... ..+..+.+-.| ++.+++.+
T Consensus 423 ~~ai~~vl~~---~~y~~~a~~ls~~~~~~p~~~~~~av~~---iE~v~r~~ 468 (507)
T PHA03392 423 VLAIVDVIEN---PKYRKNLKELRHLIRHQPMTPLHKAIWY---TEHVIRNK 468 (507)
T ss_pred HHHHHHHhCC---HHHHHHHHHHHHHHHhCCCCHHHHHHHH---HHHHHhCC
Confidence 9999999999 7766655554444442 23343333333 34455444
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.99 E-value=8.9e-05 Score=82.11 Aligned_cols=253 Identities=16% Similarity=0.157 Sum_probs=131.7
Q ss_pred HHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCc----hhh-hhHHHhhhhhhhHHHHHHHHHHHhccEE
Q 004092 207 KASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEG----TLA-TRARNYASSGQLELLNDWKKVFNRATVV 281 (774)
Q Consensus 207 l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~----~l~-~~~~k~~~~~~~~li~~~~~~~~~a~~v 281 (774)
+...+...+||+|+++.-... .++..+.....++| |.++|+. ... ...+.. .+........+
T Consensus 59 ~~~~~~~~~Pd~Vlv~GD~~~-~la~alaA~~~~ip-v~HieaGlRs~d~~~g~~de~-----------~R~~i~~la~l 125 (346)
T PF02350_consen 59 LADVLEREKPDAVLVLGDRNE-ALAAALAAFYLNIP-VAHIEAGLRSGDRTEGMPDEI-----------NRHAIDKLAHL 125 (346)
T ss_dssp HHHHHHHHT-SEEEEETTSHH-HHHHHHHHHHTT-E-EEEES-----S-TTSSTTHHH-----------HHHHHHHH-SE
T ss_pred HHHHHHhcCCCEEEEEcCCch-HHHHHHHHHHhCCC-EEEecCCCCccccCCCCchhh-----------hhhhhhhhhhh
Confidence 455577799999999998874 44433333467799 5667763 111 011111 22222222223
Q ss_pred EccCCc---chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHH-HHHh-CCCCCCEEEEEEecccccccccccHHHH
Q 004092 282 VFPDYV---LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTV-RVKM-GFKPDDLVIAIVGTQFMYRGLWLEHALI 356 (774)
Q Consensus 282 v~ps~~---~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~l-R~~l-gl~~~~~vIl~vGsrl~~~KgiKg~~lL 356 (774)
.|+... ...+..+.+..+++++-+..+|.... ..+...... ...+ ...+++ ++++..-+............+
T Consensus 126 hf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~--~~~~~~~~~~~~~i~~~~~~~-~iLvt~H~~t~~~~~~~~~~i 202 (346)
T PF02350_consen 126 HFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQ--NKEEIEEKYKNSGILQDAPKP-YILVTLHPVTNEDNPERLEQI 202 (346)
T ss_dssp EEESSHHHHHHHHHTT--GGGEEE---HHHHHHHH--HHHTTCC-HHHHHHHHCTTSE-EEEEE-S-CCCCTHH--HHHH
T ss_pred hccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHH--hHHHHhhhhhhHHHHhccCCC-EEEEEeCcchhcCChHHHHHH
Confidence 333222 33455677778888886545554210 000001111 1111 113444 444444244332112446677
Q ss_pred HHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccC
Q 004092 357 LRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLE 434 (774)
Q Consensus 357 LeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E 434 (774)
.++++.+.+. ++ +.+++...+.. .....+.+..+ .+ + +|.+.... .+...+++.|+++|.-|
T Consensus 203 ~~~l~~L~~~-~~-------~~vi~~~hn~p-~~~~~i~~~l~--~~-~-~v~~~~~l~~~~~l~ll~~a~~vvgdS--- 266 (346)
T PF02350_consen 203 LEALKALAER-QN-------VPVIFPLHNNP-RGSDIIIEKLK--KY-D-NVRLIEPLGYEEYLSLLKNADLVVGDS--- 266 (346)
T ss_dssp HHHHHHHHHH-TT-------EEEEEE--S-H-HHHHHHHHHHT--T--T-TEEEE----HHHHHHHHHHESEEEESS---
T ss_pred HHHHHHHHhc-CC-------CcEEEEecCCc-hHHHHHHHHhc--cc-C-CEEEECCCCHHHHHHHHhcceEEEEcC---
Confidence 8888888776 55 78888874321 23345555555 33 3 68888766 78899999999998655
Q ss_pred cCCccHHHH-HHHHcCCCEEEc-CCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHH
Q 004092 435 EQTFPEILV-KALCFRKPIIAP-DLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNI 501 (774)
Q Consensus 435 ~qGfp~~ll-EAMA~G~PVIat-d~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m 501 (774)
| .+. ||.++|+|||.- +.+.-++.+..+.+ .++. .|.+++.++|.+++.+ .+...++
T Consensus 267 ----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~n-vlv~-~~~~~I~~ai~~~l~~---~~~~~~~ 325 (346)
T PF02350_consen 267 ----S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSN-VLVG-TDPEAIIQAIEKALSD---KDFYRKL 325 (346)
T ss_dssp ----H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSE-EEET-SSHHHHHHHHHHHHH----HHHHHHH
T ss_pred ----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcce-EEeC-CCHHHHHHHHHHHHhC---hHHHHhh
Confidence 4 455 999999999997 44555677766664 4576 6899999999999987 5555544
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00065 Score=71.15 Aligned_cols=293 Identities=15% Similarity=0.103 Sum_probs=155.3
Q ss_pred eEEEEecCC-CCC-hHHHHHHHHHHHHHHcCCeEEEEEcCCCc--chhhhhhcCccEEEcccchhHHHHhhhcCccEEEE
Q 004092 146 QLALVFPDL-LID-PQQLQMVTIAIALREIGYAIQVYSLEDGR--AHEVWRNIGVPVAILQTGREKASFVNWLNYDGILV 221 (774)
Q Consensus 146 rialV~~~L-~~G-G~e~~v~~Lak~L~~~G~eV~V~t~~~~~--~~~~~~~~gi~i~~l~~~~~l~~~i~~~~~DIIhv 221 (774)
+|+++.... ..| |.-..+..||+.|.+.|..+..++..+.+ ....++...+..... ...++..++|++++
T Consensus 2 ~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~~~f~~~~~~~------~n~ik~~k~d~lI~ 75 (318)
T COG3980 2 KVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKVYEGFKVLEGRG------NNLIKEEKFDLLIF 75 (318)
T ss_pred cEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhhhhhccceeeec------ccccccccCCEEEE
Confidence 566665544 444 66678999999999999888888766522 122344433322111 11567889999999
Q ss_pred cCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCCEE
Q 004092 222 NSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYY 301 (774)
Q Consensus 222 hs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~ 301 (774)
.+.....-...++.. ..+.|+++.-.. ...... + .+.++.... ...+.+... +.+..
T Consensus 76 Dsygl~~dd~k~ik~-e~~~k~l~fDd~--~~~~~~-d----~d~ivN~~~---~a~~~y~~v------------~~k~~ 132 (318)
T COG3980 76 DSYGLNADDFKLIKE-EAGSKILIFDDE--NAKSFK-D----NDLIVNAIL---NANDYYGLV------------PNKTR 132 (318)
T ss_pred eccCCCHHHHHHHHH-HhCCcEEEecCC--Cccchh-h----hHhhhhhhh---cchhhcccc------------CcceE
Confidence 988765555555531 233565543221 111010 1 122221111 111111111 22332
Q ss_pred EeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEE
Q 004092 302 VIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMI 381 (774)
Q Consensus 302 vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvI 381 (774)
+.-|.+.-+-..++ ...|++.-..+..-+++..| -..+ |++ .++.++.|.+.. +.+.|
T Consensus 133 ~~lGp~y~~lr~eF------~~~r~~~~~r~~r~ilI~lG-GsDp----k~l--t~kvl~~L~~~~---------~nl~i 190 (318)
T COG3980 133 YYLGPGYAPLRPEF------YALREENTERPKRDILITLG-GSDP----KNL--TLKVLAELEQKN---------VNLHI 190 (318)
T ss_pred EEecCCceeccHHH------HHhHHHHhhcchheEEEEcc-CCCh----hhh--HHHHHHHhhccC---------eeEEE
Confidence 33221111100011 12233322223333677777 3445 443 577777776653 34444
Q ss_pred EeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCE--EE--cCC
Q 004092 382 LSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPI--IA--PDL 457 (774)
Q Consensus 382 vGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PV--Ia--td~ 457 (774)
|-|...+. ...+++.++ ..+ ++.++-..+++.+++..||+.+.. -|.++.||...|+|. |+ .+.
T Consensus 191 V~gs~~p~-l~~l~k~~~---~~~-~i~~~~~~~dma~LMke~d~aI~A-------aGstlyEa~~lgvP~l~l~~a~NQ 258 (318)
T COG3980 191 VVGSSNPT-LKNLRKRAE---KYP-NINLYIDTNDMAELMKEADLAISA-------AGSTLYEALLLGVPSLVLPLAENQ 258 (318)
T ss_pred EecCCCcc-hhHHHHHHh---hCC-CeeeEecchhHHHHHHhcchheec-------cchHHHHHHHhcCCceEEeeeccH
Confidence 44321111 144555555 233 588888888999999999999854 378999999999993 32 222
Q ss_pred cccccccccCccEEEEcC---CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 004092 458 SNIRKYVDDRVNGYLFPK---ENIKALTHIILQVITNGKISPFARNIASIGR 506 (774)
Q Consensus 458 ggi~EiV~dg~~G~Lv~~---~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar 506 (774)
-......+. -|+.... -...+....+.++.+| ..++..+....+
T Consensus 259 ~~~a~~f~~--lg~~~~l~~~l~~~~~~~~~~~i~~d---~~~rk~l~~~~~ 305 (318)
T COG3980 259 IATAKEFEA--LGIIKQLGYHLKDLAKDYEILQIQKD---YARRKNLSFGSK 305 (318)
T ss_pred HHHHHHHHh--cCchhhccCCCchHHHHHHHHHhhhC---HHHhhhhhhccc
Confidence 222222221 2322222 2456778888999999 888776655443
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00055 Score=77.51 Aligned_cols=128 Identities=14% Similarity=0.125 Sum_probs=86.8
Q ss_pred eEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcC
Q 004092 377 IKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456 (774)
Q Consensus 377 v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd 456 (774)
.++++..|..+..+. ++++ ++...++. ....++..||++|... --+++.||+.+|+|+|+-+
T Consensus 266 ~~vi~~~~~~~~~~~----------~~p~-n~~v~~~~-p~~~~l~~ad~vI~hG------G~gtt~eaL~~gvP~vv~P 327 (406)
T COG1819 266 VRVIVSLGGARDTLV----------NVPD-NVIVADYV-PQLELLPRADAVIHHG------GAGTTSEALYAGVPLVVIP 327 (406)
T ss_pred cEEEEeccccccccc----------cCCC-ceEEecCC-CHHHHhhhcCEEEecC------CcchHHHHHHcCCCEEEec
Confidence 577777744332222 7777 89999888 4445999999999875 3457899999999999866
Q ss_pred Ccc----cccccccCccEEEEc--CCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004092 457 LSN----IRKYVDDRVNGYLFP--KENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLL 525 (774)
Q Consensus 457 ~gg----i~EiV~dg~~G~Lv~--~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~ 525 (774)
.+. ..+.+++-..|...+ .-+++.++++|.++++| +..+++..+......+.-...++++...+++
T Consensus 328 ~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~---~~~~~~~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 328 DGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLAD---DSYRRAAERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred CCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 552 234555656687777 47899999999999999 6666555444433334444444444444333
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0017 Score=70.85 Aligned_cols=326 Identities=14% Similarity=0.058 Sum_probs=176.9
Q ss_pred CChHHHHHHHHHHHHHHcCCeEEEEEcCCCc---chhhhhhcCcc--EEEcccchhHHHHhhhcCccEEEEcCCc----h
Q 004092 156 IDPQQLQMVTIAIALREIGYAIQVYSLEDGR---AHEVWRNIGVP--VAILQTGREKASFVNWLNYDGILVNSLE----A 226 (774)
Q Consensus 156 ~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~---~~~~~~~~gi~--i~~l~~~~~l~~~i~~~~~DIIhvhs~~----~ 226 (774)
.+|......-+.+.|...||++..+-..+.- ....+...+-. ++.-.........++..++|+|.+.... .
T Consensus 13 ~~~~~~~~~~~~~~l~~~g~kvlflE~~~~~~~k~rd~~~~~~~~~~~~~~~~e~~~~~~i~~fk~d~iv~~~~~~~~~~ 92 (373)
T COG4641 13 NNGSAEYYRGLLRALKMDGMKVLFLESGDFWDYKNRDIDAEDGCTEAFYKDQPELESLLYIREFKPDIIVNMSGDDQPDE 92 (373)
T ss_pred cCCchhhHHHHHHHHHhccceEEEEecccHHhhhcccccCccchhheeecCcHHHHHHHHHHhcCCcEEEEecccccccc
Confidence 5666677788999999999999998876521 11111111111 1111111223345677899999876543 0
Q ss_pred hHHHHHHHhCCCCCCCEEEEEcCchhhh-----hHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc--hhhcccCCCCC
Q 004092 227 KVVISNIMQEPFKSLPLVWTIHEGTLAT-----RARNYASSGQLELLNDWKKVFNRATVVVFPDYVL--PMMYSAFDAGN 299 (774)
Q Consensus 227 ~~~l~~Ll~~~~~~ipvI~tiHg~~l~~-----~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~--~~i~~~v~~~k 299 (774)
-.....+......++|+++..-+.+... ..+...... ....+.. +..-.... ...+......+
T Consensus 93 ~~~~~~~a~l~~~~l~~~~w~te~p~~~~~~~~~~~~~~~~~---~l~~fd~-------v~~~g~~l~~~~yyq~~~~~~ 162 (373)
T COG4641 93 ESTIDLWAWLKRKCLPVIVWYTEDPYDTDIFSQVAEEQLARR---PLFIFDN-------VLSFGGGLVANKYYQEGGARN 162 (373)
T ss_pred eehHHHHHHhhcCCcceEEEEeccchhhhhhhhhhHHHhhcc---ccchhhh-------hhhccchHHHHHHHHhhcccc
Confidence 0011112222345678665555433210 001111000 0000000 00000000 01111222334
Q ss_pred EEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEE
Q 004092 300 YYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKV 379 (774)
Q Consensus 300 i~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~L 379 (774)
.+.++ .++|...+.+.++. ..-..-+.++| ...+ .. .+.++++..+ |.. ..-.+-++
T Consensus 163 ~~~~~-~a~d~~~~~~i~~d-----------a~~~~dL~~ig-n~~p----Dr----~e~~ke~~~~-ps~-kl~v~rr~ 219 (373)
T COG4641 163 CYYLP-WAVDDSLFHPIPPD-----------ASYDVDLNLIG-NPYP----DR----VEEIKEFFVE-PSF-KLMVDRRF 219 (373)
T ss_pred eeccC-ccCCchhcccCCcc-----------ccceeeeEEec-CCCc----cH----HHHHHHHhhc-cch-hhhcccee
Confidence 45555 57776555554432 11223577888 3333 22 4444443321 110 00000233
Q ss_pred EEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc---ccHHHHHHHcCEEEEcCc--cCcCCc--cHHHHHHHHcCCCE
Q 004092 380 MILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE---GDVDSVLNTADVVIYGSF--LEEQTF--PEILVKALCFRKPI 452 (774)
Q Consensus 380 vIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~---~dl~~~l~aaDI~V~PS~--~E~qGf--p~~llEAMA~G~PV 452 (774)
...| +. |-..+ ... .-.+ ++...|+. ..+..++...|+++.-+. .+..++ .+-+.|+|+||.|.
T Consensus 220 ~~~g-~~---y~~~~---~~~-~~~~-~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~l 290 (373)
T COG4641 220 YVLG-PR---YPDDI---WGR-TWEP-NVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFL 290 (373)
T ss_pred eecC-Cc---cchhh---hcc-cccc-hhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCcc
Confidence 4444 22 11111 111 1112 45555543 578889999999876442 222133 88999999999999
Q ss_pred EEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHH
Q 004092 453 IAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAMLLENV 528 (774)
Q Consensus 453 Iatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e~l 528 (774)
|+....++...+.+|+.=++ ..|.+++.+++..++.. ++.++++++.|++.+ ..|+-+.-+..+...+..+
T Consensus 291 iT~~~~~~e~~f~pgk~~iv--~~d~kdl~~~~~yll~h---~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 291 ITDYWKDLEKFFKPGKDIIV--YQDSKDLKEKLKYLLNH---PDERKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred ccccHHHHHHhcCCchheEE--ecCHHHHHHHHHHHhcC---cchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999999999999885333 35899999999999999 999999999999999 5688888887777777764
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0032 Score=67.37 Aligned_cols=272 Identities=13% Similarity=0.168 Sum_probs=157.0
Q ss_pred cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHH-HHHhccEEEccCCcchh--
Q 004092 214 LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKK-VFNRATVVVFPDYVLPM-- 290 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~-~~~~a~~vv~ps~~~~~-- 290 (774)
.+.+-+++|+......+..++..+..-.++.|.+-|..++... .....+++...+. +..+...+......+..
T Consensus 38 ~r~~rff~HGqFn~~lwlall~g~~~~~q~yWhiWGaDLYe~~----~~lk~rlfy~lRR~aq~rvg~v~atrGD~~~~a 113 (322)
T PRK02797 38 NRAQRFFLHGQFNPTLWLALLSGKIKPKQFYWHIWGADLYEES----KGLKFRLFYPLRRLAQKRVGHVFATRGDLSYFA 113 (322)
T ss_pred CccceEEEecCCCHHHHHHHHhCCcCccceEEEEEChhhhhcc----cchhHHHHHHHHHHHHhhcCeEEEecchHHHHH
Confidence 6778888999876556666665555566789999886665111 1111122222222 22222222221111111
Q ss_pred -hcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhccc
Q 004092 291 -MYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSV 369 (774)
Q Consensus 291 -i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~ 369 (774)
....+. .+..+.|. -++. ..... .. ...+.+.+.+.+|..-.+. .++ ++|+..+.+...+
T Consensus 114 ~~~~~v~-~~llyfpt-~m~~----~l~~~------~~-~~~~~~~~tIlvGNSgd~S---N~H---ie~L~~l~~~~~~ 174 (322)
T PRK02797 114 QRHPKVP-GSLLYFPT-RMDP----SLNTM------AN-DRQRAGKMTILVGNSGDRS---NRH---IEALRALHQQFGD 174 (322)
T ss_pred HhcCCCC-ccEEecCC-cchh----hhccc------cc-cccCCCceEEEEeCCCCCc---ccH---HHHHHHHHHHhCC
Confidence 111222 23444441 1111 00000 00 0123345788888788887 888 5555555443221
Q ss_pred CCCCCCCeEEEE-Ee-CCCCCchHHHHHHHHHHcCCCCccEEEcc-Cc--ccHHHHHHHcCEEEEcCccCcCCccHHHHH
Q 004092 370 ENESNSPIKVMI-LS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMA-AE--GDVDSVLNTADVVIYGSFLEEQTFPEILVK 444 (774)
Q Consensus 370 ~~~~~~~v~LvI-vG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG-~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llE 444 (774)
++++++ .| |...++|.+.+++.++++--.+ ++..+- .. +|..++++.||+.++.-..- ||+|.. +-
T Consensus 175 ------~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~-~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQ-QgiGnl-~l 245 (322)
T PRK02797 175 ------NVKIIVPMGYPANNQAYIEEVRQAGLALFGAE-NFQILTEKLPFDDYLALLRQCDLGYFIFARQ-QGIGTL-CL 245 (322)
T ss_pred ------CeEEEEECCcCCCCHHHHHHHHHHHHHhcCcc-cEEehhhhCCHHHHHHHHHhCCEEEEeechh-hHHhHH-HH
Confidence 277666 44 4466789999999999887645 577665 33 88999999999999987665 578765 56
Q ss_pred HHHcCCCEEEc-CCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 004092 445 ALCFRKPIIAP-DLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAM 523 (774)
Q Consensus 445 AMA~G~PVIat-d~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~ 523 (774)
.+.+|+||+.+ +.+-..++.+.|. -++++.++. -.++. .+..++|+..-++.+. |+.++.++.|.+
T Consensus 246 Li~~G~~v~l~r~n~fwqdl~e~gv-~Vlf~~d~L---~~~~v--------~e~~rql~~~dk~~I~-Ff~pn~~~~W~~ 312 (322)
T PRK02797 246 LIQLGKPVVLSRDNPFWQDLTEQGL-PVLFTGDDL---DEDIV--------REAQRQLASVDKNIIA-FFSPNYLQGWRN 312 (322)
T ss_pred HHHCCCcEEEecCCchHHHHHhCCC-eEEecCCcc---cHHHH--------HHHHHHHHhhCcceee-ecCHhHHHHHHH
Confidence 89999999776 5666677766655 344554333 11111 1223334444444444 999999999999
Q ss_pred HHHHHhc
Q 004092 524 LLENVLK 530 (774)
Q Consensus 524 L~e~ll~ 530 (774)
+++.+..
T Consensus 313 ~l~~~~g 319 (322)
T PRK02797 313 ALAIAAG 319 (322)
T ss_pred HHHHhhC
Confidence 9988643
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.007 Score=65.66 Aligned_cols=283 Identities=14% Similarity=0.147 Sum_probs=157.4
Q ss_pred EEEcccchhHHHHh----hhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHH
Q 004092 198 VAILQTGREKASFV----NWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKK 273 (774)
Q Consensus 198 i~~l~~~~~l~~~i----~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~ 273 (774)
+......+.+...+ +..+.+-+++|..........++..+....++.|.+-|..++.....+ .-+++...+.
T Consensus 57 i~~~~~Kk~la~avi~~a~~~r~~kff~HGqFn~~lwlaLl~g~~~~~k~~WhIWGaDLYe~~~~~----k~rlfy~lRr 132 (360)
T PF07429_consen 57 IECFSSKKALAQAVIAKAKADRADKFFLHGQFNPWLWLALLFGKIKLKKCYWHIWGADLYEDSRSL----KFRLFYFLRR 132 (360)
T ss_pred eEEecCHHHHHHHHHHHHhhCccceEEEeccCcHHHHHHHHcCCccccceEEEEeCchhhcccccc----chhHHHHHHH
Confidence 44455555544432 236788899999877556666665556667899999986666321111 1122222222
Q ss_pred -HHHhccEEEccCCcch---hhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccc
Q 004092 274 -VFNRATVVVFPDYVLP---MMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGL 349 (774)
Q Consensus 274 -~~~~a~~vv~ps~~~~---~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~Kg 349 (774)
...+...+......+. ..+..... ...+.| ..++... .. .......+...-+.+|..-.+.
T Consensus 133 ~aq~rvg~V~at~GDl~~~~q~~~~~~~-~~lyfP-t~m~~~~----~~-------~~~~~~~~~~ltILvGNSgd~s-- 197 (360)
T PF07429_consen 133 LAQKRVGHVFATRGDLAYFQQRYPRVPA-SLLYFP-TRMDPAL----TL-------SEKNKKNKGKLTILVGNSGDPS-- 197 (360)
T ss_pred HHHhhcCeEEEEcchHHHHHHHcCCCCc-eEEEcC-CCCchhh----hc-------cccccCCCCceEEEEcCCCCCC--
Confidence 2223333222111122 22222222 244444 2333210 00 0111123345778888778887
Q ss_pred cccHHHHHHHHHHchhhcccCCCCCCCeEEEE-Ee-CCCCCchHHHHHHHHHHcCCCCccEEEcc-Cc--ccHHHHHHHc
Q 004092 350 WLEHALILRALLPLFSEVSVENESNSPIKVMI-LS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMA-AE--GDVDSVLNTA 424 (774)
Q Consensus 350 iKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvI-vG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG-~~--~dl~~~l~aa 424 (774)
-++ ++|+..|.+...+ ++++++ .| |...++|.+.+.+.++++--.+ ++..+- +. +|..++++.|
T Consensus 198 -NnH---ieaL~~L~~~~~~------~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~-~~~iL~e~mpf~eYl~lL~~c 266 (360)
T PF07429_consen 198 -NNH---IEALEALKQQFGD------DVKIIVPLSYGANNQAYIQQVIQAGKELFGAE-NFQILTEFMPFDEYLALLSRC 266 (360)
T ss_pred -ccH---HHHHHHHHHhcCC------CeEEEEECCCCCchHHHHHHHHHHHHHhcCcc-ceeEhhhhCCHHHHHHHHHhC
Confidence 888 6666666543221 267655 45 5556789999999999775544 576654 44 8899999999
Q ss_pred CEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccc-cccccCccEEEEcCC--CHHHHHHHHHHHHHcCCCcHHHHHH
Q 004092 425 DVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIR-KYVDDRVNGYLFPKE--NIKALTHIILQVITNGKISPFARNI 501 (774)
Q Consensus 425 DI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~-EiV~dg~~G~Lv~~~--d~e~La~aI~~Ll~d~~~~~~r~~m 501 (774)
|+.+++...- ||+|+. +-.+.+|+||+.+.....- ++.+.+. -+++..+ |...++++=.++..-
T Consensus 267 Dl~if~~~RQ-QgiGnI-~lLl~~G~~v~L~~~np~~~~l~~~~i-pVlf~~d~L~~~~v~ea~rql~~~---------- 333 (360)
T PF07429_consen 267 DLGIFNHNRQ-QGIGNI-CLLLQLGKKVFLSRDNPFWQDLKEQGI-PVLFYGDELDEALVREAQRQLANV---------- 333 (360)
T ss_pred CEEEEeechh-hhHhHH-HHHHHcCCeEEEecCChHHHHHHhCCC-eEEeccccCCHHHHHHHHHHHhhC----------
Confidence 9999999775 578764 5689999999887655444 4444433 3444322 334444443333332
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004092 502 ASIGRRSVKNLMALETIEGYAMLLEN 527 (774)
Q Consensus 502 ~~~ar~~ak~fs~~~~a~~y~~L~e~ 527 (774)
-++.+ .|..++..+.|.+.+.-
T Consensus 334 ---dk~~i-aFf~pny~~~w~~~l~~ 355 (360)
T PF07429_consen 334 ---DKQQI-AFFAPNYLQGWRQALRL 355 (360)
T ss_pred ---cccce-eeeCCchHHHHHHHHHH
Confidence 01111 26667777777776654
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0077 Score=64.12 Aligned_cols=279 Identities=14% Similarity=0.127 Sum_probs=160.0
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccch----------------hHHHHhhhcCccEEEE
Q 004092 158 PQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGR----------------EKASFVNWLNYDGILV 221 (774)
Q Consensus 158 G~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~----------------~l~~~i~~~~~DIIhv 221 (774)
.......++...|+++||+|.+-|...+.....++.+|++...+.-.. .+.+++...+||+.+.
T Consensus 11 ~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~g~~tl~~Kl~~~~eR~~~L~ki~~~~kpdv~i~ 90 (346)
T COG1817 11 PHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSIGKHGGVTLKEKLLESAERVYKLSKIIAEFKPDVAIG 90 (346)
T ss_pred chhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCCeEeecccCCccHHHHHHHHHHHHHHHHHHHhhcCCceEee
Confidence 344567789999999999999999888888888888888876654322 2445566789999775
Q ss_pred -cCCchhHHHHHHHhCCCCCCCEEEEEcC-chhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch--hhcccCCC
Q 004092 222 -NSLEAKVVISNIMQEPFKSLPLVWTIHE-GTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP--MMYSAFDA 297 (774)
Q Consensus 222 -hs~~~~~~l~~Ll~~~~~~ipvI~tiHg-~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~--~i~~~v~~ 297 (774)
|++.. +.++..+ ++|.|+.... .+.. ..+. .+..++.+..|..... ...-+-++
T Consensus 91 ~~s~~l-~rvafgL-----g~psIi~~D~ehA~~--qnkl--------------~~Pla~~ii~P~~~~~~~~~~~G~~p 148 (346)
T COG1817 91 KHSPEL-PRVAFGL-----GIPSIIFVDNEHAEA--QNKL--------------TLPLADVIITPEAIDEEELLDFGADP 148 (346)
T ss_pred cCCcch-hhHHhhc-----CCceEEecCChhHHH--Hhhc--------------chhhhhheecccccchHHHHHhCCCc
Confidence 44444 2333333 4687776553 1111 1111 2223333333322211 11112222
Q ss_pred CCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCC-EEEEEEec-ccccccccccHHHHHHHHHHchhhcccCCCCCC
Q 004092 298 GNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDD-LVIAIVGT-QFMYRGLWLEHALILRALLPLFSEVSVENESNS 375 (774)
Q Consensus 298 ~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~-~vIl~vGs-rl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~ 375 (774)
.++.-.+|..--.+ ...|.+ ..++-+++|+.++. .+++=.-+ .-.+..|-.+.+.+.++++.+.+.
T Consensus 149 ~~i~~~~giae~~~-v~~f~p--d~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~--------- 216 (346)
T COG1817 149 NKISGYNGIAELAN-VYGFVP--DPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKY--------- 216 (346)
T ss_pred cceecccceeEEee-cccCCC--CHHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhC---------
Confidence 23322222110000 011212 35667889999864 44443322 233444446666677777777653
Q ss_pred CeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEc
Q 004092 376 PIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAP 455 (774)
Q Consensus 376 ~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIat 455 (774)
-.+++-.+ ...++..+ +..+ ++..-..-|-..++-.|++++-.+ |.---||...|+|.|++
T Consensus 217 --giV~ipr~------~~~~eife--~~~n--~i~pk~~vD~l~Llyya~lvig~g-------gTMarEaAlLGtpaIs~ 277 (346)
T COG1817 217 --GIVLIPRE------KEQAEIFE--GYRN--IIIPKKAVDTLSLLYYATLVIGAG-------GTMAREAALLGTPAISC 277 (346)
T ss_pred --cEEEecCc------hhHHHHHh--hhcc--ccCCcccccHHHHHhhhheeecCC-------chHHHHHHHhCCceEEe
Confidence 33444321 22334444 5544 443334456667888899988443 34456999999999998
Q ss_pred CCc---ccccccccCccEEEEcCCCHHHHHHHHHHHHHc
Q 004092 456 DLS---NIRKYVDDRVNGYLFPKENIKALTHIILQVITN 491 (774)
Q Consensus 456 d~g---gi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d 491 (774)
.-| +..++..+ .|.++...|+.+..+...+++.+
T Consensus 278 ~pGkll~vdk~lie--~G~~~~s~~~~~~~~~a~~~l~~ 314 (346)
T COG1817 278 YPGKLLAVDKYLIE--KGLLYHSTDEIAIVEYAVRNLKY 314 (346)
T ss_pred cCCccccccHHHHh--cCceeecCCHHHHHHHHHHHhhc
Confidence 744 34444444 68899988888888888888877
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.019 Score=63.59 Aligned_cols=96 Identities=10% Similarity=0.004 Sum_probs=63.6
Q ss_pred CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEc
Q 004092 332 PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHM 411 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~fl 411 (774)
++..+.++-|||-..-+ +.+..+++|+..+.+++ ..+++.|.+.. +.+++...+. . .+.+.
T Consensus 166 ~~~~I~llPGSR~~Ei~--~llP~~~~aa~~L~~~~---------~~~~i~~a~~~----~~i~~~~~~~--~--~~~~~ 226 (347)
T PRK14089 166 KEGTIAFMPGSRKSEIK--RLMPIFKELAKKLEGKE---------KILVVPSFFKG----KDLKEIYGDI--S--EFEIS 226 (347)
T ss_pred CCCEEEEECCCCHHHHH--HHHHHHHHHHHHHhhcC---------cEEEEeCCCcH----HHHHHHHhcC--C--CcEEe
Confidence 34556677777654431 66677779988887642 57777774332 4455544422 2 24444
Q ss_pred cCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcC
Q 004092 412 AAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456 (774)
Q Consensus 412 G~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd 456 (774)
+ +..++|++||+.+..| |.+.+|++.+|+|.|...
T Consensus 227 ~---~~~~~m~~aDlal~~S-------GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 227 Y---DTHKALLEAEFAFICS-------GTATLEAALIGTPFVLAY 261 (347)
T ss_pred c---cHHHHHHhhhHHHhcC-------cHHHHHHHHhCCCEEEEE
Confidence 3 6678999999999887 455569999999988743
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0076 Score=60.56 Aligned_cols=157 Identities=12% Similarity=0.099 Sum_probs=88.5
Q ss_pred CeEEEEecC---CCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccchh--HH----------H
Q 004092 145 PQLALVFPD---LLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGRE--KA----------S 209 (774)
Q Consensus 145 ~rialV~~~---L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~~--l~----------~ 209 (774)
.+|++|-.- -..||.|+.+.+|+..|.++|++|+|+|..+........-.|+.+..++.... +. .
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~ 81 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLH 81 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHH
Confidence 456666664 34799999999999999999999999998764422233334444444433221 10 1
Q ss_pred Hh---hh--cCccEEEEcCCchhHHHHHHHhC-CCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHH-HHHhccEEE
Q 004092 210 FV---NW--LNYDGILVNSLEAKVVISNIMQE-PFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKK-VFNRATVVV 282 (774)
Q Consensus 210 ~i---~~--~~~DIIhvhs~~~~~~l~~Ll~~-~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~-~~~~a~~vv 282 (774)
.+ +. .++|+|+++....++++..+... +..+.|+++++||-...+ .|+.. ....++...+. +.+.++.++
T Consensus 82 al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlEWkR--~KW~~-~~k~~lk~~E~~avk~ad~lI 158 (185)
T PF09314_consen 82 ALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLEWKR--AKWGR-PAKKYLKFSEKLAVKYADRLI 158 (185)
T ss_pred HHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcchhhh--hhcCH-HHHHHHHHHHHHHHHhCCEEE
Confidence 11 11 35789999988744455554432 234679999999844332 12211 11222222222 455666655
Q ss_pred ccCCcch-hhcccCCCCCEEEeC
Q 004092 283 FPDYVLP-MMYSAFDAGNYYVIP 304 (774)
Q Consensus 283 ~ps~~~~-~i~~~v~~~ki~vIp 304 (774)
..+..+. .+...+...+..+||
T Consensus 159 aDs~~I~~y~~~~y~~~~s~~Ia 181 (185)
T PF09314_consen 159 ADSKGIQDYIKERYGRKKSTFIA 181 (185)
T ss_pred EcCHHHHHHHHHHcCCCCcEEec
Confidence 5544432 223333335566676
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.23 E-value=2.1e-05 Score=77.59 Aligned_cols=90 Identities=19% Similarity=0.248 Sum_probs=61.0
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc--------cccccccCccEEEEcC--C
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN--------IRKYVDDRVNGYLFPK--E 476 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg--------i~EiV~dg~~G~Lv~~--~ 476 (774)
+|.++++.+++.++|+.||++|.-. -+.++.|++++|+|.|.-+..+ ....+.+...|..+.. .
T Consensus 56 ~v~~~~~~~~m~~~m~~aDlvIs~a------G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~ 129 (167)
T PF04101_consen 56 NVKVFGFVDNMAELMAAADLVISHA------GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESEL 129 (167)
T ss_dssp CCEEECSSSSHHHHHHHHSEEEECS-------CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-
T ss_pred cEEEEechhhHHHHHHHcCEEEeCC------CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccC
Confidence 6999999999999999999988643 3679999999999988766655 2222322222444333 2
Q ss_pred CHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 004092 477 NIKALTHIILQVITNGKISPFARNIASIG 505 (774)
Q Consensus 477 d~e~La~aI~~Ll~d~~~~~~r~~m~~~a 505 (774)
+++.|.++|..++.+ +.....|.+++
T Consensus 130 ~~~~L~~~i~~l~~~---~~~~~~~~~~~ 155 (167)
T PF04101_consen 130 NPEELAEAIEELLSD---PEKLKEMAKAA 155 (167)
T ss_dssp SCCCHHHHHHCHCCC---HH-SHHHCCCH
T ss_pred CHHHHHHHHHHHHcC---cHHHHHHHHHH
Confidence 367899999999998 76666665543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.002 Score=67.89 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=30.0
Q ss_pred eEEEEecCC----CCChHHHHHHHHHHHHHHcCCeEEEEEcCC
Q 004092 146 QLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLED 184 (774)
Q Consensus 146 rialV~~~L----~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~ 184 (774)
||++|.... ..||...++..|+++|+++|++|.|+.+..
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccc
Confidence 466666644 469999999999999999999999999866
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.015 Score=64.76 Aligned_cols=304 Identities=15% Similarity=0.156 Sum_probs=127.1
Q ss_pred CCCeEEEEecC-CCCChHHHHHHHHHHHHHHc--CCeEEEEEcCCCcchhhhhhcCccEEEcccchhHHHHhhhcCccEE
Q 004092 143 RKPQLALVFPD-LLIDPQQLQMVTIAIALREI--GYAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGI 219 (774)
Q Consensus 143 rk~rialV~~~-L~~GG~e~~v~~Lak~L~~~--G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~~l~~~i~~~~~DII 219 (774)
++.+|++.... -..++-...+ .+.|.+. ++++..++..... .....+..+......+ .+......+++
T Consensus 12 ~~~~Ivf~~~~g~~~~dN~~~l---~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~s~~---~~~~~~~Ak~~ 82 (369)
T PF04464_consen 12 KKKKIVFESESGNKFSDNPKAL---FEYLIKNYPDYKIYWIINKKSP---ELKPKGIKVVKFGSLK---HIYYLARAKYI 82 (369)
T ss_dssp EEEEEEEEBTTTTBS-HHHHHH---HHHHHHH-TTSEEEEEESSGGG-------SS-EEEETTSHH---HHHHHHHEEEE
T ss_pred cCCEEEEEECCCCCCCCCHHHH---HHHHHhhCCCcEEEEEEcCchH---hhccCCceEEeecHHH---HHHHHHhCcEE
Confidence 34445555442 2344544444 4455433 4555554433222 2223343433333222 22223457777
Q ss_pred EEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch-hhcc--cCC
Q 004092 220 LVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP-MMYS--AFD 296 (774)
Q Consensus 220 hvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~-~i~~--~v~ 296 (774)
++.+.... .. ......+.++|.++||.++.. +..-.... ..............+.+++++.... .... +++
T Consensus 83 i~~~~~~~-~~---~~~~~~~~~~i~lwHG~~~K~-~g~~~~~~-~~~~~~~~~~~~~~d~~~~~s~~~~~~~~~~f~~~ 156 (369)
T PF04464_consen 83 ISDSYFPD-LI---YFKKRKNQKYIQLWHGIPLKK-IGYDSPDN-KNYRKNYKRNYRNYDYFIVSSEFEKEIFKKAFGYP 156 (369)
T ss_dssp EESS---T------TS---TTSEEEE--SS--SB---GGG-S----TS-HHHHHHHTT-SEEEESSHHHHHHHHHHTT--
T ss_pred EECCCCCc-cc---ccccCCCcEEEEecCCCcccc-cchhcccc-ccchhhhhhhccCCcEEEECCHHHHHHHHHHhccC
Confidence 77743331 11 112245679999999964431 10000000 0000022223445555555544422 2222 233
Q ss_pred CCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEeccccccccc---ccH--HHHHHHHHHchhhcccCC
Q 004092 297 AGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLW---LEH--ALILRALLPLFSEVSVEN 371 (774)
Q Consensus 297 ~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~Kgi---Kg~--~lLLeA~~~L~~~~p~~~ 371 (774)
.+++.+. |.|-...-+... ....+.+++.++++.++.+|+|+-+ +.....- +.. ..-++.+.. ...++
T Consensus 157 ~~~i~~~-G~PR~D~l~~~~-~~~~~~i~~~~~~~~~~k~ILyaPT-~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~-- 229 (369)
T PF04464_consen 157 EDKILVT-GYPRNDYLFNKS-KENRNRIKKKLGIDKDKKVILYAPT-WRDNSSNEYFKFFFSDLDFEKLNF--LLKNN-- 229 (369)
T ss_dssp GGGEEES---GGGHHHHHST-T-HHHHHHHHTT--SS-EEEEEE-----GGG--GGSS----TT-HHHHHH--HHTTT--
T ss_pred cceEEEe-CCCeEhHHhccC-HHHHHHHHHHhccCCCCcEEEEeec-cccccccccccccccccCHHHHHH--HhCCC--
Confidence 3444433 433221111111 1114567888999999889999862 2221000 011 112233332 22233
Q ss_pred CCCCCeEEEEEeCCCCCchHHHHHHHHHH-cCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCC
Q 004092 372 ESNSPIKVMILSGDSTSNYSVVIEAIAHN-LHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRK 450 (774)
Q Consensus 372 ~~~~~v~LvIvGG~~~e~Y~~~L~~la~~-lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~ 450 (774)
+.+++-.-|.. +..... ....+ +|.+.....++.+++..||++|.= ++.++.|++.+++
T Consensus 230 -----~~li~k~Hp~~-------~~~~~~~~~~~~-~i~~~~~~~~~~~ll~~aDiLITD-------ySSi~fD~~~l~K 289 (369)
T PF04464_consen 230 -----YVLIIKPHPNM-------KKKFKDFKEDNS-NIIFVSDNEDIYDLLAAADILITD-------YSSIIFDFLLLNK 289 (369)
T ss_dssp -----EEEEE--SHHH-------HTT----TT-TT-TEEE-TT-S-HHHHHHT-SEEEES-------S-THHHHHGGGT-
T ss_pred -----cEEEEEeCchh-------hhchhhhhccCC-cEEECCCCCCHHHHHHhcCEEEEe-------chhHHHHHHHhCC
Confidence 77777663211 111111 23444 788887777999999999999843 5779999999999
Q ss_pred CEEE--cCCcc-------cccccccCccEEEEcCCCHHHHHHHHHHHHHc
Q 004092 451 PIIA--PDLSN-------IRKYVDDRVNGYLFPKENIKALTHIILQVITN 491 (774)
Q Consensus 451 PVIa--td~gg-------i~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d 491 (774)
|||- .|... ..+ ..+...|.++. +.++|.++|..++++
T Consensus 290 Piify~~D~~~Y~~~rg~~~~-~~~~~pg~~~~--~~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 290 PIIFYQPDLEEYEKERGFYFD-YEEDLPGPIVY--NFEELIEAIENIIEN 336 (369)
T ss_dssp -EEEE-TTTTTTTTTSSBSS--TTTSSSS-EES--SHHHHHHHHTTHHHH
T ss_pred CEEEEeccHHHHhhccCCCCc-hHhhCCCceeC--CHHHHHHHHHhhhhC
Confidence 9995 34321 122 12223455654 799999999999887
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.12 Score=56.32 Aligned_cols=104 Identities=15% Similarity=0.148 Sum_probs=65.4
Q ss_pred EEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCC
Q 004092 378 KVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDL 457 (774)
Q Consensus 378 ~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ 457 (774)
-++|.|+...+.-++.+.+.+. +.+ +|.+.-+.+++..+++.|+..|.-+-+ +++.|-+++|||.+.-+.
T Consensus 253 ~~ivtGP~MP~~~r~~l~~~A~--~~p--~i~I~~f~~~~~~ll~gA~~vVSm~GY------NTvCeILs~~k~aLivPr 322 (400)
T COG4671 253 WLIVTGPFMPEAQRQKLLASAP--KRP--HISIFEFRNDFESLLAGARLVVSMGGY------NTVCEILSFGKPALIVPR 322 (400)
T ss_pred eEEEeCCCCCHHHHHHHHHhcc--cCC--CeEEEEhhhhHHHHHHhhheeeecccc------hhhhHHHhCCCceEEecc
Confidence 3555564333222333333333 223 699999999999999999999976533 488999999999766554
Q ss_pred cccc-cccc-------cCccEEEEcC-CCHHHHHHHHHHHHHc
Q 004092 458 SNIR-KYVD-------DRVNGYLFPK-ENIKALTHIILQVITN 491 (774)
Q Consensus 458 ggi~-EiV~-------dg~~G~Lv~~-~d~e~La~aI~~Ll~d 491 (774)
.... |... =|-...+.|. -+++.||++|...+.-
T Consensus 323 ~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~ 365 (400)
T COG4671 323 AAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALAR 365 (400)
T ss_pred CCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccC
Confidence 4332 3221 1222333332 3478888888888773
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.047 Score=62.68 Aligned_cols=183 Identities=14% Similarity=0.149 Sum_probs=125.7
Q ss_pred HHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcC
Q 004092 324 VRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLH 402 (774)
Q Consensus 324 lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lg 402 (774)
.|..++++++.+++..+. .+ + |--...++.+..+.+..|+ -.|++.- +...+ ..++..++++|
T Consensus 749 ~r~~y~Lp~d~vvf~~FN-qL-y----KidP~~l~~W~~ILk~VPn-------S~LwllrfPa~ge---~rf~ty~~~~G 812 (966)
T KOG4626|consen 749 TRSQYGLPEDAVVFCNFN-QL-Y----KIDPSTLQMWANILKRVPN-------SVLWLLRFPAVGE---QRFRTYAEQLG 812 (966)
T ss_pred CCCCCCCCCCeEEEeech-hh-h----cCCHHHHHHHHHHHHhCCc-------ceeEEEeccccch---HHHHHHHHHhC
Confidence 366789999987666666 32 2 4445668999999999898 7888877 33222 56889999999
Q ss_pred CCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccc------cccccCccEEEEc
Q 004092 403 YPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIR------KYVDDRVNGYLFP 474 (774)
Q Consensus 403 L~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~------EiV~dg~~G~Lv~ 474 (774)
++.++|+|..-. +|=..-.+-+||.+-.....+-+ +-+|.+-+|+|+|+-+..... -+..-|. |-++.
T Consensus 813 l~p~riifs~va~k~eHvrr~~LaDv~LDTplcnGhT---Tg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl-~hlia 888 (966)
T KOG4626|consen 813 LEPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCNGHT---TGMDVLWAGVPMVTMPGETLASRVAASLLTALGL-GHLIA 888 (966)
T ss_pred CCccceeeccccchHHHHHhhhhhhhcccCcCcCCcc---cchhhhccCCceeecccHHHHHHHHHHHHHHccc-HHHHh
Confidence 988899999854 55556677899998666554222 345888999999986533221 1111222 33332
Q ss_pred CCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-H--hcCHHHHHHHHHHHHHHHhc
Q 004092 475 KENIKALTHIILQVITNGKISPFARNIASIGRRSV-K--NLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 475 ~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k--~fs~~~~a~~y~~L~e~ll~ 530 (774)
.+-++..+.-.++-.| .+..+++...-+... . -|+....+...+++|-+.-+
T Consensus 889 -k~~eEY~~iaV~Latd---~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~ 943 (966)
T KOG4626|consen 889 -KNREEYVQIAVRLATD---KEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWK 943 (966)
T ss_pred -hhHHHHHHHHHHhhcC---HHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHH
Confidence 4678888888888888 777777766655444 2 38888888888888877644
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.48 Score=49.98 Aligned_cols=301 Identities=11% Similarity=0.067 Sum_probs=139.0
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh--hhcCccEEEccc--chhHHHHhhhcCccEEEEcCCchhH-----
Q 004092 158 PQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW--RNIGVPVAILQT--GREKASFVNWLNYDGILVNSLEAKV----- 228 (774)
Q Consensus 158 G~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~--~~~gi~i~~l~~--~~~l~~~i~~~~~DIIhvhs~~~~~----- 228 (774)
|+.+.....-.++.+.|++++++...+....... +...+.+..+.+ .....+.+ .+||++++++.++..
T Consensus 2 GVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~dsH~~~~~si~k~~~~e~de~v~~v--N~yDI~m~nSvPa~~vqE~~ 79 (355)
T PF11440_consen 2 GVTRNALEMRDWFDKNGVEFTIVSADEKSFTRPDSHDSKSFSIPKYLAKEYDETVKKV--NDYDIVMFNSVPATKVQEAI 79 (355)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEETSS--TTTTSSS-TTTEEEE-TTTHHHHHHHHH--TSSSEEEEEE--BTTS-HHH
T ss_pred CccccHHHHHHHHHhcCCeeEEEEecccccCCccccccceeeeehhhHHHHHHHHHHh--hccCEEEEecccCchHHHHH
Confidence 6777788888899999999999987663322111 112223333322 22223333 489999999865421
Q ss_pred --HHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc---ch-----hhcccCCC-
Q 004092 229 --VISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV---LP-----MMYSAFDA- 297 (774)
Q Consensus 229 --~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~---~~-----~i~~~v~~- 297 (774)
.+..++......+++|...|+.... .+.+. .......+.++.+..-+.. .. .+......
T Consensus 80 iNnY~kii~~Ik~~ik~V~~~Hdh~~l-sI~rn---------~~le~~m~~~DvIfshs~~g~f~kv~m~~l~Ps~~~l~ 149 (355)
T PF11440_consen 80 INNYEKIIKKIKPSIKVVGFMHDHNKL-SIDRN---------PYLEGTMNEMDVIFSHSDNGWFSKVLMKELLPSKVSLF 149 (355)
T ss_dssp HHHHHHHHHCS-TTSEEEEEE---SHH-HHTTB---------SSHHHHHHH-SEEEES-TTSHHHHTHHHHHS-SS--SS
T ss_pred HHHHHHHHHhccccceeEEEeecccee-ecccc---------ccHHHHHHhhcEEEeccccchHHHHHHHhhccccCchh
Confidence 1233444433356778888863211 01100 0111122334422211111 00 01111111
Q ss_pred CCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEE---EEEecccccccccccHHHHHHHHHHchhhcccCCCCC
Q 004092 298 GNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVI---AIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESN 374 (774)
Q Consensus 298 ~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vI---l~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~ 374 (774)
+++...|- .+...++..-...|..+..+..++.. +|+| |..-- ||...+++.-++..+. +.
T Consensus 150 ~~i~~~p~------v~nfqpp~~i~~~Rstywkd~se~nmnv~~yig-R~Tt~---kG~~~mfD~h~~~lK~-~~----- 213 (355)
T PF11440_consen 150 DRIKKFPM------VFNFQPPMDINKYRSTYWKDVSEKNMNVNRYIG-RQTTW---KGPRRMFDLHEKILKP-AG----- 213 (355)
T ss_dssp S-------------EEE----B-HHHHHHHH---GGGSEEEEEEEE---SSGG---G-HHHHHHHHHHTTTT-TT-----
T ss_pred hhhhhcce------eeecCCcccHHHHHHHHhhhhHhhhcccceeee-eeeee---cCcHHHhhhHHHhcCC-cc-----
Confidence 22323330 01111222234566666655555555 8999 55554 9999999988886655 55
Q ss_pred CCeEEEEEe-CCCCCchHHHHHHH-----------HHHcCC-CCccEEEcc-Cc-ccHHHHHHHcCEEEEcCc-----cC
Q 004092 375 SPIKVMILS-GDSTSNYSVVIEAI-----------AHNLHY-PLGVVKHMA-AE-GDVDSVLNTADVVIYGSF-----LE 434 (774)
Q Consensus 375 ~~v~LvIvG-G~~~e~Y~~~L~~l-----------a~~lgL-~~~~V~flG-~~-~dl~~~l~aaDI~V~PS~-----~E 434 (774)
++-++-| .... ..- .+.+. +.+..+ ++..+..+| ++ ++..+.++.+-..+.-+. .+
T Consensus 214 --~~t~~~GierS~-A~~-~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~ 289 (355)
T PF11440_consen 214 --FKTIMEGIERSP-AKI-SIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQ 289 (355)
T ss_dssp ---EEEEE---SST-HHH-HHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-S
T ss_pred --hhHHhhhhhcCC-cee-eeecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHH
Confidence 8888888 3332 111 11111 001111 233577777 44 788888888877665441 22
Q ss_pred cCCccHHHHHHHHcCC-CEEEcCCccccc-------ccccCccEEEEcCCCHHHHHHHHHHHHHc
Q 004092 435 EQTFPEILVKALCFRK-PIIAPDLSNIRK-------YVDDRVNGYLFPKENIKALTHIILQVITN 491 (774)
Q Consensus 435 ~qGfp~~llEAMA~G~-PVIatd~ggi~E-------iV~dg~~G~Lv~~~d~e~La~aI~~Ll~d 491 (774)
. .+-.+-+|..|||. ||.-...|..-. ++......+.++..|.++-.+.|.++.++
T Consensus 290 r-~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 290 R-SMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIYFDENDLESTVEKLIEVANN 353 (355)
T ss_dssp S----HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EEE-TTSHHHHHHHHHHHHT-
T ss_pred h-hhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeEeccchHHHHHHHHHHHhcc
Confidence 2 57789999999996 777766554333 33333446778888999999988888766
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=1.6 Score=49.83 Aligned_cols=98 Identities=9% Similarity=0.137 Sum_probs=61.1
Q ss_pred HHHHHHHHHHcCCCCccEEEc-c--CcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCc-cccccccc
Q 004092 391 SVVIEAIAHNLHYPLGVVKHM-A--AEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLS-NIRKYVDD 466 (774)
Q Consensus 391 ~~~L~~la~~lgL~~~~V~fl-G--~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g-gi~EiV~d 466 (774)
....+++.+.+.-+. ++.++ + ...++..+++.||++|-.-.+ .++-|+++|+|+|+-.+. -...++.+
T Consensus 293 ~~~~~~l~~~~~~~~-~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-------a~I~a~~~gvP~i~i~Y~~K~~~~~~~ 364 (426)
T PRK10017 293 RMVALNLRQHVSDPA-RYHVVMDELNDLEMGKILGACELTVGTRLH-------SAIISMNFGTPAIAINYEHKSAGIMQQ 364 (426)
T ss_pred HHHHHHHHHhccccc-ceeEecCCCChHHHHHHHhhCCEEEEecch-------HHHHHHHcCCCEEEeeehHHHHHHHHH
Confidence 344566666555433 34432 2 225777999999998865443 567899999999986553 12222221
Q ss_pred -CccEEEEcC--CCHHHHHHHHHHHHHcCCCcHHHH
Q 004092 467 -RVNGYLFPK--ENIKALTHIILQVITNGKISPFAR 499 (774)
Q Consensus 467 -g~~G~Lv~~--~d~e~La~aI~~Ll~d~~~~~~r~ 499 (774)
|...++++. -+.++|.+.+.+++++ .+..+
T Consensus 365 lg~~~~~~~~~~l~~~~Li~~v~~~~~~---r~~~~ 397 (426)
T PRK10017 365 LGLPEMAIDIRHLLDGSLQAMVADTLGQ---LPALN 397 (426)
T ss_pred cCCccEEechhhCCHHHHHHHHHHHHhC---HHHHH
Confidence 222343443 3567899999999998 65544
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.99 Score=54.58 Aligned_cols=209 Identities=9% Similarity=0.045 Sum_probs=129.5
Q ss_pred EEEeCCCCCCcccccccCchh-hHHHHHHhCCC-CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCe
Q 004092 300 YYVIPGSPAKAWEADTNMDLY-NDTVRVKMGFK-PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPI 377 (774)
Q Consensus 300 i~vIpg~gvd~~~~~~~~~~~-k~~lR~~lgl~-~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v 377 (774)
+..+| +|+|...+....... ...-..+++-+ .++.+++.+- ++.+. ||...=+.|+.++..++|. -..++
T Consensus 241 v~~~p-igid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD-~~d~~---kg~~~Kl~a~e~~L~~~pe---~~~kV 312 (732)
T KOG1050|consen 241 VKALP-IGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVD-RLDSI---KGIQLKLLAFEQFLEEYPE---WIDKV 312 (732)
T ss_pred eeecc-cccchHHhhccccchhHHHHHHHHhhhccCCceEeccc-ccccc---cCchHHHHHHHHHHHhChh---hhceE
Confidence 34444 566664443333322 11122222222 3556777777 88888 5555558889888888886 33447
Q ss_pred EEEEEe-CCCC--Cch---HHHHHHHHHHc----CCCC-ccEEEcc-Cc--ccHHHHHHHcCEEEEcCccCcCCccHHHH
Q 004092 378 KVMILS-GDST--SNY---SVVIEAIAHNL----HYPL-GVVKHMA-AE--GDVDSVLNTADVVIYGSFLEEQTFPEILV 443 (774)
Q Consensus 378 ~LvIvG-G~~~--e~Y---~~~L~~la~~l----gL~~-~~V~flG-~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~ll 443 (774)
.++.+. +... ++| ...+...+.+. +-.. ..|.++- .. .++.+++..+|+++..+..+ |..++.+
T Consensus 313 vliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rd--Gmnl~~~ 390 (732)
T KOG1050|consen 313 VLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRD--GMNLVFL 390 (732)
T ss_pred EEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeeccccc--ccchhhh
Confidence 777776 4222 222 22222222221 1111 1344443 22 77889999999999999999 8999999
Q ss_pred HHHHcC----CCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHH-HHHHHHhcCHHHHH
Q 004092 444 KALCFR----KPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASI-GRRSVKNLMALETI 518 (774)
Q Consensus 444 EAMA~G----~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~-ar~~ak~fs~~~~a 518 (774)
|..+|. .+.|.+...|....++++ ..++.+.|.++++.+|...++. ++...++... .+..+...+....+
T Consensus 391 e~i~~~~~~~~~lVlsef~G~~~tl~d~--aivvnpw~~~~~~~~i~~al~~---s~~e~~~r~~~~~~~v~~~~~~~W~ 465 (732)
T KOG1050|consen 391 EYILCQENKKSVLVLSEFIGDDTTLEDA--AIVVNPWDGDEFAILISKALTM---SDEERELREPKHYKYVSTHDVVYWA 465 (732)
T ss_pred HHHHhhcccCCceEEeeecccccccccc--CEEECCcchHHHHHHHHHHhhc---CHHHHhhcchhhhhhhcchhHHHHH
Confidence 999885 678888888888888774 5789999999999999999998 6665554432 23333333444444
Q ss_pred HHHHH
Q 004092 519 EGYAM 523 (774)
Q Consensus 519 ~~y~~ 523 (774)
..+.+
T Consensus 466 ~~~~~ 470 (732)
T KOG1050|consen 466 KSFLQ 470 (732)
T ss_pred HHHHH
Confidence 44444
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.01 E-value=4.6 Score=44.15 Aligned_cols=242 Identities=14% Similarity=0.128 Sum_probs=127.9
Q ss_pred hHHHHHHHHHHHHHH-cCCeEEEEEcCCCcchhhhhhc--CccEEEcccchhHHHHhhhcCccEEEEcCCchhHHHHHHH
Q 004092 158 PQQLQMVTIAIALRE-IGYAIQVYSLEDGRAHEVWRNI--GVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIM 234 (774)
Q Consensus 158 G~e~~v~~Lak~L~~-~G~eV~V~t~~~~~~~~~~~~~--gi~i~~l~~~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll 234 (774)
|.+.+..-||++|.. .++++..+.... .+... ................+....||+|+...-... .....+
T Consensus 2 Gh~~Q~~GLa~aL~~~~~~~~~~v~~~~-----~~~~lp~~~~~~~~~~~~~~~~~~~~~~pdLiIsaGr~t~-~~~~~l 75 (311)
T PF06258_consen 2 GHENQSLGLAEALGRLTPYEIKRVDVRR-----PWRWLPRLLPAPLRALLKPFSPALEPPWPDLIISAGRRTA-PAALAL 75 (311)
T ss_pred chHHHHHHHHHHhcCccCcceeEecccc-----chhhccccccchHHHhhhcccccccCCCCcEEEECCCchH-HHHHHH
Confidence 678899999999987 378887776544 01111 000000000001111233467999999887773 444444
Q ss_pred hCCCCC-CCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccC-CCCCEEEeCCCCCCccc
Q 004092 235 QEPFKS-LPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAF-DAGNYYVIPGSPAKAWE 312 (774)
Q Consensus 235 ~~~~~~-ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v-~~~ki~vIpg~gvd~~~ 312 (774)
.+...+ +++|+..+ +-. ... ..+.++.|.+. .. ...|+....+.+-
T Consensus 76 ~r~~gg~~~~V~i~~--P~~------~~~--------------~FDlvi~p~HD------~~~~~~Nvl~t~ga~~---- 123 (311)
T PF06258_consen 76 RRASGGRTKTVQIMD--PRL------PPR--------------PFDLVIVPEHD------RLPRGPNVLPTLGAPN---- 123 (311)
T ss_pred HHHcCCCceEEEEcC--CCC------Ccc--------------ccCEEEECccc------CcCCCCceEecccCCC----
Confidence 443333 46666555 111 111 22333444221 22 2355555554221
Q ss_pred ccccCchh----hHHHHHHhCCCCCCEEEEEEeccc-ccccccccHH---HHHHHHHHchhhcccCCCCCCCeEEEEEe-
Q 004092 313 ADTNMDLY----NDTVRVKMGFKPDDLVIAIVGTQF-MYRGLWLEHA---LILRALLPLFSEVSVENESNSPIKVMILS- 383 (774)
Q Consensus 313 ~~~~~~~~----k~~lR~~lgl~~~~~vIl~vGsrl-~~~KgiKg~~---lLLeA~~~L~~~~p~~~~~~~~v~LvIvG- 383 (774)
...+.. +..+...++-.+...+.+.+||-. .+. .+.+ .+++.+..+.+.++ ..++|..
T Consensus 124 --~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~---~~~~~~~~l~~~l~~~~~~~~--------~~~~vttS 190 (311)
T PF06258_consen 124 --RITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYR---WDEEDAERLLDQLAALAAAYG--------GSLLVTTS 190 (311)
T ss_pred --cCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcc---cCHHHHHHHHHHHHHHHHhCC--------CeEEEEcC
Confidence 111211 233334555556666777777422 222 3444 56667777666543 4788887
Q ss_pred CCCCCchHHHHHHHHHHcCCCCccEEEcc-Cc-ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc
Q 004092 384 GDSTSNYSVVIEAIAHNLHYPLGVVKHMA-AE-GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN 459 (774)
Q Consensus 384 G~~~e~Y~~~L~~la~~lgL~~~~V~flG-~~-~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg 459 (774)
.--.. +....+.+.++-.. .+.+.. .- +-+..+|+.||.++...- +.+ -+.||.+.|+||..-+..+
T Consensus 191 RRTp~---~~~~~L~~~~~~~~-~~~~~~~~~~nPy~~~La~ad~i~VT~D----SvS-MvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 191 RRTPP---EAEAALRELLKDNP-GVYIWDGTGENPYLGFLAAADAIVVTED----SVS-MVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred CCCcH---HHHHHHHHhhcCCC-ceEEecCCCCCcHHHHHHhCCEEEEcCc----cHH-HHHHHHHcCCCEEEecCCC
Confidence 32221 23333333333333 563433 22 447899999999998862 233 4689999999998877665
|
The function of this family is unknown. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=94.84 E-value=3.8 Score=44.91 Aligned_cols=113 Identities=13% Similarity=0.203 Sum_probs=68.8
Q ss_pred hHHHHHHhCCCC-CCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHH
Q 004092 321 NDTVRVKMGFKP-DDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAH 399 (774)
Q Consensus 321 k~~lR~~lgl~~-~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~ 399 (774)
......++++++ +..+++..|+...+.|.|. .+...+.+..+.+. . .+++++||+.+. +..+++.+
T Consensus 161 ~~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp-~e~~~~li~~l~~~--~-------~~ivl~G~~~e~---~~~~~i~~ 227 (334)
T TIGR02195 161 QAAALAKFGLDTERPIIAFCPGAEFGPAKRWP-HEHYAELAKRLIDQ--G-------YQVVLFGSAKDH---PAGNEIEA 227 (334)
T ss_pred HHHHHHHcCCCCCCCEEEEcCCCCCCccCCCC-HHHHHHHHHHHHHC--C-------CEEEEEEChhhH---HHHHHHHH
Confidence 334556667664 4566677775543444443 33445555555432 2 688899976542 23334444
Q ss_pred HcCCCCccEEEccC--cccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEc
Q 004092 400 NLHYPLGVVKHMAA--EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAP 455 (774)
Q Consensus 400 ~lgL~~~~V~flG~--~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIat 455 (774)
. .++..+.+.|. ..++..+++.||++|..- +..+-=|-|+|+|+|+-
T Consensus 228 ~--~~~~~~~l~g~~sL~el~ali~~a~l~I~~D-------SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 228 L--LPGELRNLAGETSLDEAVDLIALAKAVVTND-------SGLMHVAAALNRPLVAL 276 (334)
T ss_pred h--CCcccccCCCCCCHHHHHHHHHhCCEEEeeC-------CHHHHHHHHcCCCEEEE
Confidence 2 22313446674 389999999999999764 33455688999999983
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=94.73 E-value=3.8 Score=43.68 Aligned_cols=86 Identities=20% Similarity=0.195 Sum_probs=55.9
Q ss_pred ccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccC--cccHHHHHHHcCEEE
Q 004092 351 LEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAA--EGDVDSVLNTADVVI 428 (774)
Q Consensus 351 Kg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~--~~dl~~~l~aaDI~V 428 (774)
...+...+.+..+.++ + ++++++|++... +..+++.+..+-.+ .+.+.|. ..++..+++.||++|
T Consensus 137 w~~~~~~~l~~~l~~~--~-------~~ivl~g~~~e~---~~~~~i~~~~~~~~-~~~~~~~~~l~e~~~li~~~~l~I 203 (279)
T cd03789 137 WPAERFAALADRLLAR--G-------ARVVLTGGPAER---ELAEEIAAALGGPR-VVNLAGKTSLRELAALLARADLVV 203 (279)
T ss_pred CCHHHHHHHHHHHHHC--C-------CEEEEEechhhH---HHHHHHHHhcCCCc-cccCcCCCCHHHHHHHHHhCCEEE
Confidence 3445556777776654 3 788999965432 33445555433223 4556664 388999999999999
Q ss_pred EcCccCcCCccHHHHHHHHcCCCEEEcC
Q 004092 429 YGSFLEEQTFPEILVKALCFRKPIIAPD 456 (774)
Q Consensus 429 ~PS~~E~qGfp~~llEAMA~G~PVIatd 456 (774)
.+- +..+--|.|+|+|+|+--
T Consensus 204 ~~D-------sg~~HlA~a~~~p~i~l~ 224 (279)
T cd03789 204 TND-------SGPMHLAAALGTPTVALF 224 (279)
T ss_pred eeC-------CHHHHHHHHcCCCEEEEE
Confidence 774 234445679999998843
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.60 E-value=2.4 Score=44.59 Aligned_cols=253 Identities=13% Similarity=0.094 Sum_probs=123.7
Q ss_pred CChHHHHHHHHHHHHHHcCCeEEEEEcCC-CcchhhhhhcCccEEEcccchhHH-HHhh---hcCccEEEEcCCchhHHH
Q 004092 156 IDPQQLQMVTIAIALREIGYAIQVYSLED-GRAHEVWRNIGVPVAILQTGREKA-SFVN---WLNYDGILVNSLEAKVVI 230 (774)
Q Consensus 156 ~GG~e~~v~~Lak~L~~~G~eV~V~t~~~-~~~~~~~~~~gi~i~~l~~~~~l~-~~i~---~~~~DIIhvhs~~~~~~l 230 (774)
..|...++..||+.|.+.-|.+.++.... +.....|-.. +.+...+.+. ..+. ...||+|+...-.+ ..+
T Consensus 10 RtGnt~QaiaLa~~l~r~eyttk~l~~~~l~~lP~~wl~~----yp~~~~~~l~~~~~~r~p~~~Pdl~I~aGrrt-a~l 84 (329)
T COG3660 10 RTGNTHQAIALAEQLTRSEYTTKLLEYNNLAKLPNFWLAY----YPIHILRELFGPRLSRKPEQRPDLIITAGRRT-APL 84 (329)
T ss_pred CCccHHHHHHHHHHhhccceEEEEeeccccccCchhhhhc----CccHhHHHhhcCccccCccCCCceEEecccch-hHH
Confidence 56888899999999998667777766542 2233333221 1111111111 1122 24599999888777 355
Q ss_pred HHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCCEEEeCCCCCCc
Q 004092 231 SNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKA 310 (774)
Q Consensus 231 ~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~ 310 (774)
...+.+.+.++++|-..|- .+- .+..|.++.-+...... . ..+..|+..|.|++-..
T Consensus 85 ~~~lkk~~~~~~vVqI~~P-rlp-------~~~fDlvivp~HD~~~~-~--------------s~~~~Nilpi~Gs~h~V 141 (329)
T COG3660 85 AFYLKKKFGGIKVVQIQDP-RLP-------YNHFDLVIVPYHDWREE-L--------------SDQGPNILPINGSPHNV 141 (329)
T ss_pred HHHHHHhcCCceEEEeeCC-CCC-------cccceEEeccchhhhhh-h--------------hccCCceeeccCCCCcc
Confidence 5555555666445444441 111 11222222211110000 0 11235666676654333
Q ss_pred ccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCc
Q 004092 311 WEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSN 389 (774)
Q Consensus 311 ~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~ 389 (774)
. +......++ .-+.++-.+...+-++||+.... -...-+.+.+-...+.+.+.+ ....+++-- -...
T Consensus 142 t--~~~lAa~~e-~~~~~~p~~rq~vAVlVGg~nk~--f~~~~d~a~q~~~~l~k~l~~-----~g~~~lisfSRRTp-- 209 (329)
T COG3660 142 T--SQRLAALRE-AFKHLLPLPRQRVAVLVGGNNKA--FVFQEDKAHQFASLLVKILEN-----QGGSFLISFSRRTP-- 209 (329)
T ss_pred c--HHHhhhhHH-HHHhhCCCCCceEEEEecCCCCC--CccCHHHHHHHHHHHHHHHHh-----CCceEEEEeecCCc--
Confidence 1 111111122 23344444566777888843221 012223334434444433322 114555444 2222
Q ss_pred hHHHHHHHHHH-cCCCCccEEEccCc---ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcC
Q 004092 390 YSVVIEAIAHN-LHYPLGVVKHMAAE---GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456 (774)
Q Consensus 390 Y~~~L~~la~~-lgL~~~~V~flG~~---~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd 456 (774)
+.++++.+. +.-.. .+.+-+.. +-..+++++||.+|..--.- .-..||.+.|+||-+-.
T Consensus 210 --~~~~s~l~~~l~s~~-~i~w~~~d~g~NPY~~~La~Adyii~TaDSi-----nM~sEAasTgkPv~~~~ 272 (329)
T COG3660 210 --DTVKSILKNNLNSSP-GIVWNNEDTGYNPYIDMLAAADYIISTADSI-----NMCSEAASTGKPVFILE 272 (329)
T ss_pred --HHHHHHHHhccccCc-eeEeCCCCCCCCchHHHHhhcceEEEecchh-----hhhHHHhccCCCeEEEe
Confidence 445555553 33333 34444431 34678999999999875322 23569999999997643
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.47 Score=54.84 Aligned_cols=112 Identities=12% Similarity=0.121 Sum_probs=71.0
Q ss_pred EEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcC------CC
Q 004092 408 VKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPK------EN 477 (774)
Q Consensus 408 V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~------~d 477 (774)
+.+.++..+. ++|+...+-.+-+. |--++++||+++|+|+|+-+..+ ....+.+-..|+.++. -+
T Consensus 341 ~vv~~W~PQ~-~IL~H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~ 415 (472)
T PLN02670 341 MIHVGWVPQV-KILSHESVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFT 415 (472)
T ss_pred eEEeCcCCHH-HHhcCcccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCc
Confidence 6667777433 47776666444442 23568899999999999976542 3334444456877753 25
Q ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHH
Q 004092 478 IKALTHIILQVITNGKISPFARNIASIGRRSVKNL----MALETIEGYAMLLENV 528 (774)
Q Consensus 478 ~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~f----s~~~~a~~y~~L~e~l 528 (774)
.+++.++|.+++.+ ++ -.++.+++++..+.+ ...++++.+.+.+.+.
T Consensus 416 ~e~i~~av~~vm~~---~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 416 SDSVAESVRLAMVD---DA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHHHHHHhcC---cc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 89999999999987 42 334555666555444 4455555555555543
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.79 Score=52.94 Aligned_cols=145 Identities=10% Similarity=0.038 Sum_probs=83.0
Q ss_pred CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEE
Q 004092 332 PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKH 410 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~f 410 (774)
++..+.+.+|+..... ...+..++++++... ..++++. ++. ..+.+.. .+ ++.+
T Consensus 273 ~~~vvyvsfGs~~~~~--~~~~~~~~~~l~~~~------------~~~lw~~~~~~-----~~~~~~~-----~~-~~~v 327 (459)
T PLN02448 273 EGSVLYVSLGSFLSVS--SAQMDEIAAGLRDSG------------VRFLWVARGEA-----SRLKEIC-----GD-MGLV 327 (459)
T ss_pred CCceEEEeecccccCC--HHHHHHHHHHHHhCC------------CCEEEEEcCch-----hhHhHhc-----cC-CEEE
Confidence 3556788888653321 133444555555432 4666655 431 1122221 23 5777
Q ss_pred ccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccC-ccEEEEc-------CCCH
Q 004092 411 MAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDR-VNGYLFP-------KENI 478 (774)
Q Consensus 411 lG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg-~~G~Lv~-------~~d~ 478 (774)
.++. .-..+|...++-++-+. |--++++||+++|+|+|+-+..+ ....+.+. ..|+-+. .-+.
T Consensus 328 ~~w~-pQ~~iL~h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~ 402 (459)
T PLN02448 328 VPWC-DQLKVLCHSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGR 402 (459)
T ss_pred eccC-CHHHHhccCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcH
Confidence 7876 34457777776444332 33568899999999999966543 33444442 2365553 1368
Q ss_pred HHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHH
Q 004092 479 KALTHIILQVITNGKIS-PFARNIASIGRRSV 509 (774)
Q Consensus 479 e~La~aI~~Ll~d~~~~-~~r~~m~~~ar~~a 509 (774)
+++++++.+++.+ + +..++|.+++.+..
T Consensus 403 ~~l~~av~~vl~~---~~~~~~~~r~~a~~~~ 431 (459)
T PLN02448 403 EEIAELVKRFMDL---ESEEGKEMRRRAKELQ 431 (459)
T ss_pred HHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence 9999999999987 4 33344544444333
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.25 Score=57.34 Aligned_cols=132 Identities=17% Similarity=0.156 Sum_probs=75.7
Q ss_pred CCCEEEEEEeccccccccccc-HHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEE
Q 004092 332 PDDLVIAIVGTQFMYRGLWLE-HALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVK 409 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~KgiKg-~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~ 409 (774)
.+..+.+.+|+.... ..+. ...+++|++.+. + ++++.- +.... .+++ ++.
T Consensus 275 ~~~vv~vsfGs~~~~--~~~~~~~~~~~~~~~~~----~--------~~iW~~~~~~~~-------------~l~~-n~~ 326 (500)
T PF00201_consen 275 KKGVVYVSFGSIVSS--MPEEKLKEIAEAFENLP----Q--------RFIWKYEGEPPE-------------NLPK-NVL 326 (500)
T ss_dssp TTEEEEEE-TSSSTT---HHHHHHHHHHHHHCST----T--------EEEEEETCSHGC-------------HHHT-TEE
T ss_pred CCCEEEEecCcccch--hHHHHHHHHHHHHhhCC----C--------cccccccccccc-------------cccc-eEE
Confidence 455678888865421 1122 344555555443 3 555544 42110 2334 788
Q ss_pred EccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCC--CHHHHHH
Q 004092 410 HMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKE--NIKALTH 483 (774)
Q Consensus 410 flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~--d~e~La~ 483 (774)
...+..+ .++|+...+-++-+. |--++++||+.+|+|+|+-+.-+ ....+.+...|...+.. +.+++.+
T Consensus 327 ~~~W~PQ-~~lL~hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ 401 (500)
T PF00201_consen 327 IVKWLPQ-NDLLAHPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRA 401 (500)
T ss_dssp EESS--H-HHHHTSTTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHH
T ss_pred Eeccccc-hhhhhcccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHH
Confidence 8888854 477776555444432 45678999999999999976543 33444444458877754 5788999
Q ss_pred HHHHHHHcCCCcHHHH
Q 004092 484 IILQVITNGKISPFAR 499 (774)
Q Consensus 484 aI~~Ll~d~~~~~~r~ 499 (774)
+|.++++| +..++
T Consensus 402 ai~~vl~~---~~y~~ 414 (500)
T PF00201_consen 402 AIREVLEN---PSYKE 414 (500)
T ss_dssp HHHHHHHS---HHHHH
T ss_pred HHHHHHhh---hHHHH
Confidence 99999999 64433
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.74 E-value=13 Score=40.93 Aligned_cols=101 Identities=17% Similarity=0.129 Sum_probs=63.4
Q ss_pred CCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEcc
Q 004092 333 DDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMA 412 (774)
Q Consensus 333 ~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG 412 (774)
...+++..|+.....|. .-.+...+.+..+.+++ .+++++||+.. . +..+++.+ ++.+ .+.+.|
T Consensus 175 ~~~i~i~pg~s~~~~K~-wp~e~~~~l~~~l~~~~---------~~Vvl~g~~~e-~--e~~~~i~~--~~~~-~~~l~~ 238 (334)
T COG0859 175 RPYIVINPGASRGSAKR-WPLEHYAELAELLIAKG---------YQVVLFGGPDE-E--ERAEEIAK--GLPN-AVILAG 238 (334)
T ss_pred CCeEEEeccccccccCC-CCHHHHHHHHHHHHHCC---------CEEEEecChHH-H--HHHHHHHH--hcCC-ccccCC
Confidence 45567777723323222 34445555566666554 58899996622 1 45556666 3443 333666
Q ss_pred Cc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcC
Q 004092 413 AE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456 (774)
Q Consensus 413 ~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd 456 (774)
.. .++..+++.||++|.+. +..+-=|-|.|+|+|+--
T Consensus 239 k~sL~e~~~li~~a~l~I~~D-------Sg~~HlAaA~~~P~I~iy 277 (334)
T COG0859 239 KTSLEELAALIAGADLVIGND-------SGPMHLAAALGTPTIALY 277 (334)
T ss_pred CCCHHHHHHHHhcCCEEEccC-------ChHHHHHHHcCCCEEEEE
Confidence 44 89999999999999774 334456889999999843
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=93.71 E-value=1 Score=51.79 Aligned_cols=93 Identities=11% Similarity=0.028 Sum_probs=57.5
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccC-ccEEEEc-CCCHHH
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDR-VNGYLFP-KENIKA 480 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg-~~G~Lv~-~~d~e~ 480 (774)
+..+.++..+. .+++..++-.+-+. |--++++||+++|+|+|+-+..+ ....+.+. ..|+-+. .-+.++
T Consensus 325 ~g~v~~w~PQ~-~iL~h~~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 399 (451)
T PLN02410 325 RGYIVKWAPQK-EVLSHPAVGGFWSH----CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGA 399 (451)
T ss_pred CeEEEccCCHH-HHhCCCccCeeeec----CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHH
Confidence 56666776433 36766555333331 22458899999999999965543 33444332 4576663 346889
Q ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 004092 481 LTHIILQVITNGKISPFARNIASIGRRS 508 (774)
Q Consensus 481 La~aI~~Ll~d~~~~~~r~~m~~~ar~~ 508 (774)
++++|.+++.+ ++ .+++.+++++.
T Consensus 400 v~~av~~lm~~---~~-~~~~r~~a~~l 423 (451)
T PLN02410 400 VERAVKRLMVE---EE-GEEMRKRAISL 423 (451)
T ss_pred HHHHHHHHHcC---Cc-HHHHHHHHHHH
Confidence 99999999987 53 33444444433
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=93.71 E-value=1.1 Score=51.60 Aligned_cols=86 Identities=15% Similarity=0.062 Sum_probs=58.1
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccC-ccEEEEcCCCHHHH
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDR-VNGYLFPKENIKAL 481 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg-~~G~Lv~~~d~e~L 481 (774)
++.+.++. .-..+|+..++-++-+. |--++++||+.+|+|+|+-+..+ ....+.+. ..|+-+..-+.+++
T Consensus 329 ~~~v~~w~-PQ~~iL~h~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l 403 (448)
T PLN02562 329 QGKVVSWA-PQLEVLKHQAVGCYLTH----CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEV 403 (448)
T ss_pred CEEEEecC-CHHHHhCCCccceEEec----CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHH
Confidence 67777877 33457777665444442 23568899999999999865443 33444432 34666655688999
Q ss_pred HHHHHHHHHcCCCcHHHHH
Q 004092 482 THIILQVITNGKISPFARN 500 (774)
Q Consensus 482 a~aI~~Ll~d~~~~~~r~~ 500 (774)
+++|.+++.+ ++.+++
T Consensus 404 ~~~v~~~l~~---~~~r~~ 419 (448)
T PLN02562 404 EEGLRKVMED---SGMGER 419 (448)
T ss_pred HHHHHHHhCC---HHHHHH
Confidence 9999999988 654443
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=93.42 E-value=2.2 Score=48.98 Aligned_cols=95 Identities=8% Similarity=0.046 Sum_probs=61.7
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----ccccccc-CccEEEEcC-----C
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDD-RVNGYLFPK-----E 476 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~d-g~~G~Lv~~-----~ 476 (774)
++.+.++..+. ++|+...+-++-+. |--++++||+++|+|+|+-+..+ ...++.+ -..|+.+.. -
T Consensus 312 g~~v~~W~PQ~-~iL~H~~v~~FvtH----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~ 386 (442)
T PLN02208 312 GVVWGGWVQQP-LILDHPSIGCFVNH----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWF 386 (442)
T ss_pred CcEeeccCCHH-HHhcCCccCeEEcc----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcC
Confidence 56677776443 47777776555553 23568899999999999965542 3333333 234766643 2
Q ss_pred CHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHH
Q 004092 477 NIKALTHIILQVITNGKIS-PFARNIASIGRRSV 509 (774)
Q Consensus 477 d~e~La~aI~~Ll~d~~~~-~~r~~m~~~ar~~a 509 (774)
+.++++++|.+++++ + +..+++.+++++..
T Consensus 387 ~~~~l~~ai~~~m~~---~~e~g~~~r~~~~~~~ 417 (442)
T PLN02208 387 SKESLSNAIKSVMDK---DSDLGKLVRSNHTKLK 417 (442)
T ss_pred cHHHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence 678999999999987 5 34455555555443
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=93.39 E-value=1.5 Score=50.72 Aligned_cols=80 Identities=9% Similarity=0.018 Sum_probs=53.0
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----ccccccc-CccEEEEcC------
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDD-RVNGYLFPK------ 475 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~d-g~~G~Lv~~------ 475 (774)
+..+.++..+. .+|+.+++-++-+.. | -++++||+++|+|+|+-+..+ ....+.+ -..|+.+..
T Consensus 325 ~g~v~~w~PQ~-~iL~h~~vg~FitH~---G-~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 399 (456)
T PLN02210 325 QGVVLEWSPQE-KILSHMAISCFVTHC---G-WNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGE 399 (456)
T ss_pred CeEEEecCCHH-HHhcCcCcCeEEeeC---C-cccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCc
Confidence 34456777443 588888744443321 3 347889999999999965543 3344444 345766642
Q ss_pred CCHHHHHHHHHHHHHc
Q 004092 476 ENIKALTHIILQVITN 491 (774)
Q Consensus 476 ~d~e~La~aI~~Ll~d 491 (774)
-+.+++++++.+++.+
T Consensus 400 ~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 400 LKVEEVERCIEAVTEG 415 (456)
T ss_pred CCHHHHHHHHHHHhcC
Confidence 3678999999999977
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.6 Score=53.73 Aligned_cols=80 Identities=16% Similarity=0.092 Sum_probs=56.9
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCc----cccccccc-CccEEEEcC-----C
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLS----NIRKYVDD-RVNGYLFPK-----E 476 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g----gi~EiV~d-g~~G~Lv~~-----~ 476 (774)
++.+.++..+. ++|+.+++-.+-+. |--++++||+++|+|+|+-+.. .....+.+ -..|+.++. -
T Consensus 335 g~~v~~W~PQ~-~iL~H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~ 409 (451)
T PLN03004 335 GMVVKSWAPQV-PVLNHKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFV 409 (451)
T ss_pred cEEEEeeCCHH-HHhCCCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCcc
Confidence 58888887443 48888998555443 2346889999999999996543 33445543 245777752 2
Q ss_pred CHHHHHHHHHHHHHc
Q 004092 477 NIKALTHIILQVITN 491 (774)
Q Consensus 477 d~e~La~aI~~Ll~d 491 (774)
+.++++++|.+++.+
T Consensus 410 ~~e~l~~av~~vm~~ 424 (451)
T PLN03004 410 SSTEVEKRVQEIIGE 424 (451)
T ss_pred CHHHHHHHHHHHhcC
Confidence 789999999999987
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.76 E-value=0.17 Score=56.24 Aligned_cols=108 Identities=14% Similarity=0.189 Sum_probs=77.6
Q ss_pred cHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccc----cccccC-ccEEE-Ec------CCCHHHHHH
Q 004092 416 DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIR----KYVDDR-VNGYL-FP------KENIKALTH 483 (774)
Q Consensus 416 dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~----EiV~dg-~~G~L-v~------~~d~e~La~ 483 (774)
|..++...|++.|+||++| -+|.+..|+-.+|+|-|+|+..|.. |.|+|. ..|+. ++ .+++++|++
T Consensus 493 DYeeFVRGCHLGVFPSYYE--PWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~ 570 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYE--PWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLAS 570 (692)
T ss_pred CHHHHhccccccccccccC--CCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHH
Confidence 5678899999999999999 4999999999999999999998864 555443 23543 33 245677888
Q ss_pred HHHHHHHcCCCcHHHHHHHHHHH-HHHH-hcCHHHHHHHHHHHHHHHh
Q 004092 484 IILQVITNGKISPFARNIASIGR-RSVK-NLMALETIEGYAMLLENVL 529 (774)
Q Consensus 484 aI~~Ll~d~~~~~~r~~m~~~ar-~~ak-~fs~~~~a~~y~~L~e~ll 529 (774)
-|...... .+++++-+..+ +... -.+|..+..-|.+.=.-.+
T Consensus 571 ~m~~F~~q----sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 571 FMYEFCKQ----SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HHHHHHHH----HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 88777765 45665554433 3343 3789988887776544333
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=92.39 E-value=4.7 Score=46.49 Aligned_cols=113 Identities=11% Similarity=0.032 Sum_probs=65.4
Q ss_pred EEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----ccccccc-CccEEEEcC-----CC
Q 004092 408 VKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDD-RVNGYLFPK-----EN 477 (774)
Q Consensus 408 V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~d-g~~G~Lv~~-----~d 477 (774)
+...++..+ .++++...+.++-+. |--++++||+++|+|+|+-+..+ ....+.+ -..|+-+.. -+
T Consensus 319 ~v~~~W~PQ-~~vL~h~~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~ 393 (453)
T PLN02764 319 VVWGGWVQQ-PLILSHPSVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFS 393 (453)
T ss_pred cEEeCCCCH-HHHhcCcccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccC
Confidence 555566633 346666545333332 23568899999999999976543 3344533 234655422 27
Q ss_pred HHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHH
Q 004092 478 IKALTHIILQVITNGKIS-PFARNIASIGRRSVKNL----MALETIEGYAMLLENV 528 (774)
Q Consensus 478 ~e~La~aI~~Ll~d~~~~-~~r~~m~~~ar~~ak~f----s~~~~a~~y~~L~e~l 528 (774)
.+++.+++.+++++ + +..+++.+++++..+.. +.....+.+.+.+.+.
T Consensus 394 ~e~i~~av~~vm~~---~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 394 KESLRDAINSVMKR---DSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDL 446 (453)
T ss_pred HHHHHHHHHHHhcC---CchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 89999999999987 5 44455555555443322 3333444444444443
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=92.06 E-value=1.7 Score=49.99 Aligned_cols=93 Identities=12% Similarity=0.092 Sum_probs=60.9
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccC-ccEEEEcC------
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDR-VNGYLFPK------ 475 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg-~~G~Lv~~------ 475 (774)
++.+.++..+ .++|+...+-++-+. +--++++||+++|+|+|+-+..+ ...++.+. ..|+-+..
T Consensus 318 ~~~i~~W~PQ-~~iL~H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~ 392 (449)
T PLN02173 318 KSLVLKWSPQ-LQVLSNKAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGI 392 (449)
T ss_pred ceEEeCCCCH-HHHhCCCccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCc
Confidence 6888888754 358888775555553 23578899999999999976543 33455442 34655532
Q ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 004092 476 ENIKALTHIILQVITNGKISPFARNIASIGRRS 508 (774)
Q Consensus 476 ~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ 508 (774)
-+.+++++++.+++.+ ++ .++|.+++++.
T Consensus 393 ~~~e~v~~av~~vm~~---~~-~~~~r~~a~~~ 421 (449)
T PLN02173 393 AKREEIEFSIKEVMEG---EK-SKEMKENAGKW 421 (449)
T ss_pred ccHHHHHHHHHHHhcC---Ch-HHHHHHHHHHH
Confidence 1679999999999987 43 23444444433
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=91.92 E-value=3.8 Score=47.66 Aligned_cols=80 Identities=10% Similarity=0.002 Sum_probs=52.4
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----cccccc-CccEEEE--------
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKYVDD-RVNGYLF-------- 473 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~EiV~d-g~~G~Lv-------- 473 (774)
++...++..+ ..+|+.+++-++-+. |--++++||+++|+|+|+-+..+- ..++.+ -..|+-+
T Consensus 346 g~~v~~w~PQ-~~iL~h~~v~~fvtH----~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 420 (482)
T PLN03007 346 GLIIRGWAPQ-VLILDHQATGGFVTH----CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKV 420 (482)
T ss_pred CEEEecCCCH-HHHhccCccceeeec----CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccccccc
Confidence 6888888855 468888877444332 235688999999999999765432 222211 1123322
Q ss_pred --cCCCHHHHHHHHHHHHHc
Q 004092 474 --PKENIKALTHIILQVITN 491 (774)
Q Consensus 474 --~~~d~e~La~aI~~Ll~d 491 (774)
+.-+.++++++|.+++.+
T Consensus 421 ~~~~~~~~~l~~av~~~m~~ 440 (482)
T PLN03007 421 KGDFISREKVEKAVREVIVG 440 (482)
T ss_pred ccCcccHHHHHHHHHHHhcC
Confidence 123688999999999987
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=90.81 E-value=3.7 Score=47.37 Aligned_cols=80 Identities=13% Similarity=0.047 Sum_probs=52.9
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCc----ccccccccC-ccEEEEc-----CC
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLS----NIRKYVDDR-VNGYLFP-----KE 476 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g----gi~EiV~dg-~~G~Lv~-----~~ 476 (774)
+..+.++..+ .++|+..++-++-+. |--++++||+.+|+|+|+-+.. .....+.+. ..|+-+. .-
T Consensus 328 ~g~v~~W~PQ-~~iL~h~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 402 (455)
T PLN02152 328 VGMIVSWCSQ-IEVLRHRAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLV 402 (455)
T ss_pred CeEEEeeCCH-HHHhCCcccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcC
Confidence 5666787754 347888776555553 2356889999999999996544 233344331 1244442 12
Q ss_pred CHHHHHHHHHHHHHc
Q 004092 477 NIKALTHIILQVITN 491 (774)
Q Consensus 477 d~e~La~aI~~Ll~d 491 (774)
+.+++++++.+++++
T Consensus 403 ~~e~l~~av~~vm~~ 417 (455)
T PLN02152 403 ERGEIRRCLEAVMEE 417 (455)
T ss_pred cHHHHHHHHHHHHhh
Confidence 678999999999977
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=90.65 E-value=7.7 Score=45.06 Aligned_cols=77 Identities=8% Similarity=0.030 Sum_probs=50.7
Q ss_pred cEEEccCcccHHHHHHH--cCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCc----cccccccc-CccEEEEcC----
Q 004092 407 VVKHMAAEGDVDSVLNT--ADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLS----NIRKYVDD-RVNGYLFPK---- 475 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~a--aDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g----gi~EiV~d-g~~G~Lv~~---- 475 (774)
.+.+.++..+ ..+|.. +++||.- |--++++||+++|+|+|+-+.. .....+.+ -..|+-+..
T Consensus 344 g~~v~~w~PQ-~~vL~h~~v~~fvtH------~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~ 416 (477)
T PLN02863 344 GLVIRGWAPQ-VAILSHRAVGAFLTH------CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADT 416 (477)
T ss_pred CEEecCCCCH-HHHhcCCCcCeEEec------CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCC
Confidence 5778888854 557775 4555533 2345889999999999996544 23334333 245665521
Q ss_pred -CCHHHHHHHHHHHHH
Q 004092 476 -ENIKALTHIILQVIT 490 (774)
Q Consensus 476 -~d~e~La~aI~~Ll~ 490 (774)
-+.+++++++.+++.
T Consensus 417 ~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 417 VPDSDELARVFMESVS 432 (477)
T ss_pred CcCHHHHHHHHHHHhh
Confidence 257899999999884
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=90.26 E-value=11 Score=45.52 Aligned_cols=143 Identities=12% Similarity=0.043 Sum_probs=80.3
Q ss_pred CCCCCEEEEEEecccccccccccHHH-HH---HHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHc---
Q 004092 330 FKPDDLVIAIVGTQFMYRGLWLEHAL-IL---RALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNL--- 401 (774)
Q Consensus 330 l~~~~~vIl~vGsrl~~~KgiKg~~l-LL---eA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~l--- 401 (774)
++++...++++- |+..- |...+ ++ +-+.+|++ .|+ ....++.+++.| ..........+.+++.+.
T Consensus 440 ldp~slfdv~~r-R~heY---KRq~LniL~ii~~y~rik~-~p~--~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~ 512 (713)
T PF00343_consen 440 LDPDSLFDVQAR-RFHEY---KRQLLNILHIIDRYNRIKN-NPN--KKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEV 512 (713)
T ss_dssp --TTSEEEEEES--SCCC---CTHHHHHHHHHHHHHHHHH-STT--SCCS-EEEEEE----TT-HHHHHHHHHHHHHHHH
T ss_pred CCcchhhhhhhh-hcccc---cccCcccccHHHHHHHHHh-ccc--CCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHH
Confidence 456776666665 66665 88877 33 34444443 332 334558888888 322322233444443322
Q ss_pred -----CCCC-ccEEEcc-Cc-ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccccccc--CccEE
Q 004092 402 -----HYPL-GVVKHMA-AE-GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDD--RVNGY 471 (774)
Q Consensus 402 -----gL~~-~~V~flG-~~-~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~d--g~~G~ 471 (774)
.+.+ .+|.|+. +. +-...++.+|||-...|...-+..|..-+-||.-|.+.++|--|...|+.+. .+|.+
T Consensus 513 in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~f 592 (713)
T PF00343_consen 513 INNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIF 592 (713)
T ss_dssp HCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSE
T ss_pred HhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEE
Confidence 2222 1477776 33 5566789999999987753333567777999999999999999998888743 45788
Q ss_pred EEcCCCHHH
Q 004092 472 LFPKENIKA 480 (774)
Q Consensus 472 Lv~~~d~e~ 480 (774)
+|-. ++++
T Consensus 593 iFG~-~~~e 600 (713)
T PF00343_consen 593 IFGL-TAEE 600 (713)
T ss_dssp EES--BHHH
T ss_pred EcCC-CHHH
Confidence 8754 3444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=90.06 E-value=2.5 Score=44.98 Aligned_cols=88 Identities=17% Similarity=0.169 Sum_probs=55.7
Q ss_pred cHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCC-CCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEc
Q 004092 352 EHALILRALLPLFSEVSVENESNSPIKVMILSGDS-TSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYG 430 (774)
Q Consensus 352 g~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~-~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~P 430 (774)
....+++.+..+.+..|+ .+++|==-|. ...... ..+.+..+.. ++.+....-++.+++..||.++.-
T Consensus 138 ~~~~~~~~l~~~~~~~p~-------~~lvvK~HP~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~Ll~~s~~Vvti 206 (269)
T PF05159_consen 138 SQADFLDMLESFAKENPD-------AKLVVKPHPDERGGNKY--SYLEELPNLP--NVVIIDDDVNLYELLEQSDAVVTI 206 (269)
T ss_pred cHhHHHHHHHHHHHHCCC-------CEEEEEECchhhCCCCh--hHhhhhhcCC--CeEEECCCCCHHHHHHhCCEEEEE
Confidence 344556667777777776 7777655331 111001 1122222344 366665556899999999999976
Q ss_pred CccCcCCccHHHHHHHHcCCCEEEcCC
Q 004092 431 SFLEEQTFPEILVKALCFRKPIIAPDL 457 (774)
Q Consensus 431 S~~E~qGfp~~llEAMA~G~PVIatd~ 457 (774)
+ +.+-+|||.+|+|||+...
T Consensus 207 n-------StvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 207 N-------STVGLEALLHGKPVIVFGR 226 (269)
T ss_pred C-------CHHHHHHHHcCCceEEecC
Confidence 4 5578899999999999643
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=89.77 E-value=7 Score=45.02 Aligned_cols=93 Identities=8% Similarity=0.003 Sum_probs=59.6
Q ss_pred EEEccCcccHHHHHHHcCE--EEEcCccCcCCccHHHHHHHHcCCCEEEcCCc----ccccccc-cCccEEEEcC-----
Q 004092 408 VKHMAAEGDVDSVLNTADV--VIYGSFLEEQTFPEILVKALCFRKPIIAPDLS----NIRKYVD-DRVNGYLFPK----- 475 (774)
Q Consensus 408 V~flG~~~dl~~~l~aaDI--~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g----gi~EiV~-dg~~G~Lv~~----- 475 (774)
..+.++..+ ..+|+.+.+ ||.-. --++++||+++|+|+|+-+.. ....++. .-..|+.+..
T Consensus 314 ~vv~~w~PQ-~~vL~h~~v~~fvtH~------G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 386 (446)
T PLN00414 314 IVWEGWVEQ-PLILSHPSVGCFVNHC------GFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGW 386 (446)
T ss_pred eEEeccCCH-HHHhcCCccceEEecC------chhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCc
Confidence 455566633 346766644 55332 246889999999999996554 2334453 3345766642
Q ss_pred CCHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHHH
Q 004092 476 ENIKALTHIILQVITNGKIS-PFARNIASIGRRSVK 510 (774)
Q Consensus 476 ~d~e~La~aI~~Ll~d~~~~-~~r~~m~~~ar~~ak 510 (774)
-+.+++++++.+++.+ + +..+++.+++++..+
T Consensus 387 ~~~~~i~~~v~~~m~~---~~e~g~~~r~~a~~~~~ 419 (446)
T PLN00414 387 FSKESLRDTVKSVMDK---DSEIGNLVKRNHKKLKE 419 (446)
T ss_pred cCHHHHHHHHHHHhcC---ChhhHHHHHHHHHHHHH
Confidence 3789999999999987 4 345556666655543
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.56 E-value=3 Score=50.31 Aligned_cols=136 Identities=13% Similarity=0.078 Sum_probs=86.7
Q ss_pred CCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHH----HHHHHcCCCC
Q 004092 331 KPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIE----AIAHNLHYPL 405 (774)
Q Consensus 331 ~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~----~la~~lgL~~ 405 (774)
.++..+++++= |+..- |.+.+.+.-+..+.....+ +..+.+.+++.| ......+...+. ..++..+...
T Consensus 484 ~p~~lfd~~~k-RiheY---KRq~Lnl~~i~~ly~~i~~--d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~l 557 (750)
T COG0058 484 DPNALFDGQAR-RIHEY---KRQLLNLLDIERLYRILKE--DWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKL 557 (750)
T ss_pred CCCcceeeeeh-hhhhh---hhhHHhHhhHHHHHHHHhc--CCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccc
Confidence 45565666666 65554 7776665544444332211 122336777777 322222223333 3344444444
Q ss_pred ccEEEcc-Cc-ccHHHHHHHcCEEEEcCc--cCcCCccHHHHHHHHcCCCEEEcCCcccccccc--cCccEEEEcC
Q 004092 406 GVVKHMA-AE-GDVDSVLNTADVVIYGSF--LEEQTFPEILVKALCFRKPIIAPDLSNIRKYVD--DRVNGYLFPK 475 (774)
Q Consensus 406 ~~V~flG-~~-~dl~~~l~aaDI~V~PS~--~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~--dg~~G~Lv~~ 475 (774)
+|.|+. +. +-...++.+|||-..-|. .| ..|..=|-||.-|.+.|+|--|...|+.+ ++.||+++-.
T Consensus 558 -kVvFl~nYdvslA~~iipa~Dvweqis~a~~E--ASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 558 -KVVFLPNYDVSLAELLIPAADVWEQIPTAGKE--ASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred -eEEEeCCCChhHHHhhcccccccccCCCCCcc--ccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 677776 33 555668999999988774 45 45666689999999999999999999986 8899999975
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=88.31 E-value=0.94 Score=40.52 Aligned_cols=81 Identities=20% Similarity=0.194 Sum_probs=53.5
Q ss_pred EEEEeCCCCCchHHHHHHHHHHcCCCCccEEE---ccCc-c--cHHHHHHHcCEEEEcCccC-cCCccHHHHHHHHcCCC
Q 004092 379 VMILSGDSTSNYSVVIEAIAHNLHYPLGVVKH---MAAE-G--DVDSVLNTADVVIYGSFLE-EQTFPEILVKALCFRKP 451 (774)
Q Consensus 379 LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~f---lG~~-~--dl~~~l~aaDI~V~PS~~E-~qGfp~~llEAMA~G~P 451 (774)
++|+||... +...+++.++++|... +.+ -|.. . .++..+..||++|++...- ....-.+--+|-..|+|
T Consensus 2 vliVGG~~~--~~~~~~~~~~~~G~~~--~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip 77 (97)
T PF10087_consen 2 VLIVGGRED--RERRYKRILEKYGGKL--IHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIP 77 (97)
T ss_pred EEEEcCCcc--cHHHHHHHHHHcCCEE--EEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCc
Confidence 678997222 2266778888888865 555 2222 3 3888999999999887322 10233444567788999
Q ss_pred EEEcCCcccccc
Q 004092 452 IIAPDLSNIRKY 463 (774)
Q Consensus 452 VIatd~ggi~Ei 463 (774)
++.++..+...+
T Consensus 78 ~~~~~~~~~~~l 89 (97)
T PF10087_consen 78 IIYSRSRGVSSL 89 (97)
T ss_pred EEEECCCCHHHH
Confidence 999986666544
|
|
| >PF15024 Glyco_transf_18: Glycosyltransferase family 18 | Back alignment and domain information |
|---|
Probab=88.04 E-value=2.6 Score=49.08 Aligned_cols=150 Identities=14% Similarity=0.175 Sum_probs=98.4
Q ss_pred EEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccC-
Q 004092 335 LVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAA- 413 (774)
Q Consensus 335 ~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~- 413 (774)
...+..|..... |++-+..++++.+.. + ++-.|.+.+.... .++. .|.-.|.
T Consensus 278 ~~AlVyGK~~~~---w~~k~~~l~~l~~~~----e-------ih~tV~~~~~~~~------------~~P~-~V~NHG~l 330 (559)
T PF15024_consen 278 NQALVYGKERYM---WKGKEKYLDVLHKYM----E-------IHGTVYDEPQRPP------------NVPS-FVKNHGIL 330 (559)
T ss_pred ceeEEEccchhh---hcCcHHHHHHHHhhc----E-------EEEEeccCCCCCc------------ccch-hhhhcCcC
Confidence 355666633332 467766677775543 2 5666655332111 3444 4555563
Q ss_pred -cccHHHHHHHcCEEEEcC-ccCcCCccHHHHHHHHcCCCEEEcCCccc---------------cc----------cccc
Q 004092 414 -EGDVDSVLNTADVVIYGS-FLEEQTFPEILVKALCFRKPIIAPDLSNI---------------RK----------YVDD 466 (774)
Q Consensus 414 -~~dl~~~l~aaDI~V~PS-~~E~qGfp~~llEAMA~G~PVIatd~ggi---------------~E----------iV~d 466 (774)
..++..++..+.+||=.. -.| |-+.+||+|.|+|.|-+..... ++ .|.
T Consensus 331 ~~~ef~~lL~~akvfiGlGfP~E----gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG- 405 (559)
T PF15024_consen 331 SGDEFQQLLRKAKVFIGLGFPYE----GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIG- 405 (559)
T ss_pred CHHHHHHHHHhhhEeeecCCCCC----CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCC-
Confidence 379999999999999433 334 5688999999999987653211 11 121
Q ss_pred CccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHH
Q 004092 467 RVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAMLLENV 528 (774)
Q Consensus 467 g~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e~l 528 (774)
.-.-|.|+.+|.+++-+||.+++++ +. .-+. -+|+.+.|.++...+++.-
T Consensus 406 ~PhVytVd~~n~~~v~~Avk~il~~---~v---------~Py~P~efT~egmLeRv~~~ie~q 456 (559)
T PF15024_consen 406 EPHVYTVDINNSTEVEAAVKAILAT---PV---------EPYLPYEFTCEGMLERVNALIEKQ 456 (559)
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHhc---CC---------CCcCCcccCHHHHHHHHHHHHHhh
Confidence 2246889999999999999999998 32 1233 5689999999988888764
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=88.00 E-value=3.6 Score=45.45 Aligned_cols=111 Identities=11% Similarity=0.138 Sum_probs=65.7
Q ss_pred HHHHhCCC-CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcC
Q 004092 324 VRVKMGFK-PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLH 402 (774)
Q Consensus 324 lR~~lgl~-~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lg 402 (774)
....+++. ++..+++..|+...+.|.|. .+...+.+..+.+. . ++++++||+.+. +..+++.+.++
T Consensus 170 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp-~e~~a~l~~~l~~~--~-------~~vvl~Gg~~e~---~~~~~i~~~~~ 236 (348)
T PRK10916 170 TCAAFSLSSERPIIGFCPGAEFGPAKRWP-HYHYAELAQQLIDE--G-------YQVVLFGSAKDH---EAGNEILAALN 236 (348)
T ss_pred HHHHcCCCCCCCEEEEeCCCCCccccCCC-HHHHHHHHHHHHHC--C-------CeEEEEeCHHhH---HHHHHHHHhcc
Confidence 34445544 44567778876543444443 33334444444422 3 788899976542 23344444332
Q ss_pred CC--CccEEEccC--cccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEE
Q 004092 403 YP--LGVVKHMAA--EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIA 454 (774)
Q Consensus 403 L~--~~~V~flG~--~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIa 454 (774)
-. ...+.+.|. ..++..+++.||++|..- +..+-=|-|.|+|+|+
T Consensus 237 ~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nD-------TGp~HlAaA~g~P~va 285 (348)
T PRK10916 237 TEQQAWCRNLAGETQLEQAVILIAACKAIVTND-------SGLMHVAAALNRPLVA 285 (348)
T ss_pred cccccceeeccCCCCHHHHHHHHHhCCEEEecC-------ChHHHHHHHhCCCEEE
Confidence 11 102456664 388999999999999663 3345568899999997
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.66 E-value=16 Score=42.44 Aligned_cols=95 Identities=9% Similarity=-0.036 Sum_probs=58.5
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----ccccc-ccCccEEEEcC------
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYV-DDRVNGYLFPK------ 475 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV-~dg~~G~Lv~~------ 475 (774)
.+.+.++. .-..+|+.+++-.+-+.. | -++++||+++|+|+|+-+..+ ....+ +.-..|+-+..
T Consensus 340 g~~v~~w~-PQ~~iL~h~~vg~fvtH~---G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~ 414 (480)
T PLN00164 340 GLVWPTWA-PQKEILAHAAVGGFVTHC---G-WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDN 414 (480)
T ss_pred CeEEeecC-CHHHHhcCcccCeEEeec---c-cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCC
Confidence 35566766 334577777754444421 3 458899999999999965432 33333 33234766532
Q ss_pred -CCHHHHHHHHHHHHHcCCCcH-HHHHHHHHHHHHH
Q 004092 476 -ENIKALTHIILQVITNGKISP-FARNIASIGRRSV 509 (774)
Q Consensus 476 -~d~e~La~aI~~Ll~d~~~~~-~r~~m~~~ar~~a 509 (774)
-+.++++++|.+++.+ ++ ..++|.+++++..
T Consensus 415 ~~~~e~l~~av~~vm~~---~~~~~~~~r~~a~~~~ 447 (480)
T PLN00164 415 FVEAAELERAVRSLMGG---GEEEGRKAREKAAEMK 447 (480)
T ss_pred cCcHHHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence 2579999999999987 43 2444555544444
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=87.50 E-value=14 Score=43.03 Aligned_cols=78 Identities=13% Similarity=0.059 Sum_probs=51.7
Q ss_pred cEEEccCcccHHHHH--HHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccC-ccEEEEc-----
Q 004092 407 VVKHMAAEGDVDSVL--NTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDR-VNGYLFP----- 474 (774)
Q Consensus 407 ~V~flG~~~dl~~~l--~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg-~~G~Lv~----- 474 (774)
++.+.++..+ ..+| .++.+||.-. | -++++||+.+|+|+|+-+..+ ...++.+. ..|+-+.
T Consensus 338 ~g~v~~W~PQ-~~iL~H~~v~~FvtH~-----G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~ 410 (480)
T PLN02555 338 KGKIVQWCPQ-EKVLAHPSVACFVTHC-----G-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAE 410 (480)
T ss_pred ceEEEecCCH-HHHhCCCccCeEEecC-----C-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccc
Confidence 6777787744 4466 4455566432 2 458899999999999976543 23334443 4466652
Q ss_pred C--CCHHHHHHHHHHHHHc
Q 004092 475 K--ENIKALTHIILQVITN 491 (774)
Q Consensus 475 ~--~d~e~La~aI~~Ll~d 491 (774)
. -+.++++++|.+++.+
T Consensus 411 ~~~v~~~~v~~~v~~vm~~ 429 (480)
T PLN02555 411 NKLITREEVAECLLEATVG 429 (480)
T ss_pred cCcCcHHHHHHHHHHHhcC
Confidence 1 2578999999999976
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=87.43 E-value=12 Score=43.59 Aligned_cols=78 Identities=8% Similarity=-0.055 Sum_probs=49.6
Q ss_pred cEEEccCcccHHHHHHHcC--EEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccc-cccCccEEEEcC----
Q 004092 407 VVKHMAAEGDVDSVLNTAD--VVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKY-VDDRVNGYLFPK---- 475 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaD--I~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~Ei-V~dg~~G~Lv~~---- 475 (774)
+..+.++.. -..+|+... +||.=. | -++++||+++|+|+|+-+..+ .... +..-..|+.+..
T Consensus 341 rg~v~~w~P-Q~~iL~h~~vg~fvtH~-----G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 413 (475)
T PLN02167 341 RGLVCGWAP-QVEILAHKAIGGFVSHC-----G-WNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVS 413 (475)
T ss_pred CeeeeccCC-HHHHhcCcccCeEEeeC-----C-cccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccc
Confidence 455667763 334666544 555432 2 347899999999999865442 2222 333334766532
Q ss_pred -----CCHHHHHHHHHHHHHc
Q 004092 476 -----ENIKALTHIILQVITN 491 (774)
Q Consensus 476 -----~d~e~La~aI~~Ll~d 491 (774)
-+.++++++|.+++.+
T Consensus 414 ~~~~~~~~~~l~~av~~~m~~ 434 (475)
T PLN02167 414 AYGEIVKADEIAGAVRSLMDG 434 (475)
T ss_pred ccCCcccHHHHHHHHHHHhcC
Confidence 2688999999999976
|
|
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=87.09 E-value=39 Score=34.70 Aligned_cols=38 Identities=24% Similarity=0.298 Sum_probs=31.5
Q ss_pred CcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCC
Q 004092 413 AEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDL 457 (774)
Q Consensus 413 ~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ 457 (774)
...++..+++.||++|....+ ..+=|+++|+|+|+-++
T Consensus 247 ~~~~~~~~~~~~~~~Is~RlH-------~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 247 SPDELLELISQADLVISMRLH-------GAILALSLGVPVIAISY 284 (286)
T ss_pred CHHHHHHHHhcCCEEEecCCH-------HHHHHHHcCCCEEEEec
Confidence 338899999999999988766 35789999999998654
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=86.53 E-value=3.2 Score=43.22 Aligned_cols=104 Identities=16% Similarity=0.194 Sum_probs=58.4
Q ss_pred CCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEE
Q 004092 331 KPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKH 410 (774)
Q Consensus 331 ~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~f 410 (774)
.++..+++..|+.. ..|.| ..+...+.+..+.+.+ ..++++|++... ..+..+.+.+ ++++..+.+
T Consensus 103 ~~~~~i~i~~~a~~-~~k~w-p~e~~~~l~~~l~~~~---------~~vvl~g~~~~~-~~~~~~~~~~--~~~~~~~~~ 168 (247)
T PF01075_consen 103 KDKPYIGINPGASW-PSKRW-PAEKWAELIERLKERG---------YRVVLLGGPEEQ-EKEIADQIAA--GLQNPVINL 168 (247)
T ss_dssp TTSSEEEEE---SS-GGGS---HHHHHHHHHHHCCCT----------EEEE--SSHHH-HHHHHHHHHT--THTTTTEEE
T ss_pred ccCCeEEEeecCCC-ccccC-CHHHHHHHHHHHHhhC---------ceEEEEccchHH-HHHHHHHHHH--hcccceEee
Confidence 45566777888544 44333 3344556666665543 578888865431 1133334444 333225788
Q ss_pred ccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEc
Q 004092 411 MAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAP 455 (774)
Q Consensus 411 lG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIat 455 (774)
.|.. .++..+++.||++|.+- +..+-=|.|+|+|+|+-
T Consensus 169 ~~~~~l~e~~ali~~a~~~I~~D-------tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 169 AGKTSLRELAALISRADLVIGND-------TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp TTTS-HHHHHHHHHTSSEEEEES-------SHHHHHHHHTT--EEEE
T ss_pred cCCCCHHHHHHHHhcCCEEEecC-------ChHHHHHHHHhCCEEEE
Confidence 8844 88899999999999774 34556788999999984
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=86.49 E-value=5.3 Score=44.24 Aligned_cols=103 Identities=15% Similarity=0.188 Sum_probs=63.7
Q ss_pred CCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEcc
Q 004092 333 DDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMA 412 (774)
Q Consensus 333 ~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG 412 (774)
+..+++..|+.. +.|.|. .+...+.+..|.+. . .+++++||+..++. +..+++++...... .+.+.|
T Consensus 183 ~~~i~i~pga~~-~~K~Wp-~e~fa~l~~~L~~~--~-------~~vvl~ggp~e~e~-~~~~~i~~~~~~~~-~~~l~g 249 (352)
T PRK10422 183 QNYVVIQPTARQ-IFKCWD-NDKFSAVIDALQAR--G-------YEVVLTSGPDKDDL-ACVNEIAQGCQTPP-VTALAG 249 (352)
T ss_pred CCeEEEecCCCc-cccCCC-HHHHHHHHHHHHHC--C-------CeEEEEcCCChHHH-HHHHHHHHhcCCCc-cccccC
Confidence 466778888543 445553 33445555555432 2 68889987643221 22344444322223 355677
Q ss_pred Cc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEc
Q 004092 413 AE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAP 455 (774)
Q Consensus 413 ~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIat 455 (774)
.. .++..+++.||++|..- +..+-=|-|+|+|+|+-
T Consensus 250 ~~sL~el~ali~~a~l~v~nD-------SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 KTTFPELGALIDHAQLFIGVD-------SAPAHIAAAVNTPLICL 287 (352)
T ss_pred CCCHHHHHHHHHhCCEEEecC-------CHHHHHHHHcCCCEEEE
Confidence 43 89999999999999663 34455677899999984
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=86.29 E-value=3.2 Score=50.60 Aligned_cols=145 Identities=10% Similarity=0.010 Sum_probs=90.5
Q ss_pred CCCCCEEEEEEecccccccccccHHH-HHHHHHHchh--hcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCC--
Q 004092 330 FKPDDLVIAIVGTQFMYRGLWLEHAL-ILRALLPLFS--EVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHY-- 403 (774)
Q Consensus 330 l~~~~~vIl~vGsrl~~~KgiKg~~l-LLeA~~~L~~--~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL-- 403 (774)
++++...++++= |+..- |...+ ++..+..+.+ ..|+ ..-.+..+++.| ..........+.+++..+.-
T Consensus 539 ldp~sLfd~qak-R~heY---KRq~LNil~~i~ry~~i~~~p~--~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~i 612 (815)
T PRK14986 539 VNPKALFDVQIK-RIHEY---KRQLMNVLHVITRYNRIKADPD--AKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVI 612 (815)
T ss_pred cCcccceeeeeh-hhhhh---hhhhHHHhhhHHHHHHHHhCCC--cCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHh
Confidence 445554555555 66665 88888 6666554432 2232 112357888888 32232223333333332110
Q ss_pred -----CCc--cEEEcc-Cc-ccHHHHHHHcCEEEEcCc--cCcCCccHHHHHHHHcCCCEEEcCCccccccccc--CccE
Q 004092 404 -----PLG--VVKHMA-AE-GDVDSVLNTADVVIYGSF--LEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDD--RVNG 470 (774)
Q Consensus 404 -----~~~--~V~flG-~~-~dl~~~l~aaDI~V~PS~--~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~d--g~~G 470 (774)
-.+ +|.|+. +. +-...++.+||+-..-|. .| .-|..=+-||.-|.+.++|--|...|+.++ ++||
T Consensus 613 n~Dp~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~E--ASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~ 690 (815)
T PRK14986 613 NNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTE--ASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENI 690 (815)
T ss_pred ccChhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCcc--ccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcE
Confidence 011 466765 33 556678999999998774 45 445556899999999999999999998876 7899
Q ss_pred EEEcCCCHHHHHH
Q 004092 471 YLFPKENIKALTH 483 (774)
Q Consensus 471 ~Lv~~~d~e~La~ 483 (774)
+++-. +++++.+
T Consensus 691 ~~fG~-~~~ev~~ 702 (815)
T PRK14986 691 FIFGN-TAEEVEA 702 (815)
T ss_pred EEeCC-CHHHHHH
Confidence 99975 5555544
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=86.09 E-value=21 Score=41.60 Aligned_cols=80 Identities=10% Similarity=-0.048 Sum_probs=54.2
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----ccccc-ccCccEEEEcC----CC
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYV-DDRVNGYLFPK----EN 477 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV-~dg~~G~Lv~~----~d 477 (774)
.+.+.++..+ .++++...+-.+-+. |--++++||+.+|+|+|+-+..+ ....+ +.-..|+-++. -+
T Consensus 339 g~vv~~W~PQ-~~iL~h~~vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~ 413 (481)
T PLN02992 339 GFVVPSWAPQ-AEILAHQAVGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVIS 413 (481)
T ss_pred CEEEeecCCH-HHHhCCcccCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCccc
Confidence 4777787743 347777776444332 23568899999999999976553 23344 23334766643 36
Q ss_pred HHHHHHHHHHHHHc
Q 004092 478 IKALTHIILQVITN 491 (774)
Q Consensus 478 ~e~La~aI~~Ll~d 491 (774)
.++++++|.+++.+
T Consensus 414 ~~~l~~av~~vm~~ 427 (481)
T PLN02992 414 RSKIEALVRKVMVE 427 (481)
T ss_pred HHHHHHHHHHHhcC
Confidence 78999999999976
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=85.26 E-value=7.4 Score=45.29 Aligned_cols=77 Identities=14% Similarity=0.040 Sum_probs=48.9
Q ss_pred cEEEccCcccHHHHHH--HcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cc-cccccCccEEEEcC----
Q 004092 407 VVKHMAAEGDVDSVLN--TADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IR-KYVDDRVNGYLFPK---- 475 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~--aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~-EiV~dg~~G~Lv~~---- 475 (774)
++.+.++.. -..+|+ ++.+||.= |--++++||+.+|+|+|+-+..+ .. ..++.-..|..++.
T Consensus 343 ~g~v~~W~P-Q~~iL~H~~v~~FvtH------~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~ 415 (481)
T PLN02554 343 IGKVIGWAP-QVAVLAKPAIGGFVTH------CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRG 415 (481)
T ss_pred CceEEeeCC-HHHHhCCcccCccccc------CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccc
Confidence 566667764 334663 44445532 23568899999999999976542 22 22333234665531
Q ss_pred ---------CCHHHHHHHHHHHHH
Q 004092 476 ---------ENIKALTHIILQVIT 490 (774)
Q Consensus 476 ---------~d~e~La~aI~~Ll~ 490 (774)
-+.++++++|.+++.
T Consensus 416 ~~~~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 416 DLLAGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred cccccccCeEcHHHHHHHHHHHhc
Confidence 268899999999997
|
|
| >PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia | Back alignment and domain information |
|---|
Probab=85.06 E-value=68 Score=35.64 Aligned_cols=331 Identities=13% Similarity=0.140 Sum_probs=175.8
Q ss_pred CCCCChHHHHHHHHHHHHHHcC--CeEEEEEcCCCc---chhhhhhcCccEEEcccchhHHHHhhhcCccEEEEcCCchh
Q 004092 153 DLLIDPQQLQMVTIAIALREIG--YAIQVYSLEDGR---AHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAK 227 (774)
Q Consensus 153 ~L~~GG~e~~v~~Lak~L~~~G--~eV~V~t~~~~~---~~~~~~~~gi~i~~l~~~~~l~~~i~~~~~DIIhvhs~~~~ 227 (774)
+++..|.-.-+.-|+..|++.. ++|.++..++.+ ....|...++++... ...+ .+.||++=-+....
T Consensus 14 siW~NGi~QN~~fL~~lL~qs~~v~~V~Lvn~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~lDVlIEmg~ql~ 85 (364)
T PF10933_consen 14 SIWENGINQNCIFLAMLLQQSPRVESVVLVNGGDGNPIPAALMLDLLDVPLVDF------DDAI--DELDVLIEMGAQLD 85 (364)
T ss_pred chhhhchhhHHHHHHHHHhhCCCcceEEEEECCCCCcCCcccccccCCCceecH------HHhc--ccCCEEEEccCccC
Confidence 3556788888999999999876 688888876542 122334444443222 2222 37899887665443
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhh-hHHHHHHHHHHHhcc-EEEccCCc--chhhcccCCCCCEEEe
Q 004092 228 VVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQ-LELLNDWKKVFNRAT-VVVFPDYV--LPMMYSAFDAGNYYVI 303 (774)
Q Consensus 228 ~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~-~~li~~~~~~~~~a~-~vv~ps~~--~~~i~~~v~~~ki~vI 303 (774)
.-....+ +..|.|+|....|+......+..+.... ..++.. ...+ +..+|+.. ..-....+....+.++
T Consensus 86 ~~~~~~~--~~~G~KvV~y~~GndYv~~~E~~lF~k~~~~~f~~-----~~yD~VW~lPq~~~~~~~yl~~l~r~Pv~~v 158 (364)
T PF10933_consen 86 PEWLDYM--RARGGKVVSYRCGNDYVMDIESMLFNKPSGHLFNG-----APYDEVWTLPQFENTCAPYLETLHRCPVRVV 158 (364)
T ss_pred HHHHHHH--HHcCCeEEEEeCCchHHHHhhHHhcCCCCCccCCC-----CCCceeEeccchhhhchHHHHHHhcCCceee
Confidence 3333334 2467899999998554433333222111 111000 0001 11222211 0011112223445566
Q ss_pred CCCCCCcccccccCchhhHHHH---HHhCCCCC--CEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeE
Q 004092 304 PGSPAKAWEADTNMDLYNDTVR---VKMGFKPD--DLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIK 378 (774)
Q Consensus 304 pg~gvd~~~~~~~~~~~k~~lR---~~lgl~~~--~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~ 378 (774)
|- +|...++... ...+. .++|..+. ...|..+=..+.--|----..+++|++- ...|+ .+.
T Consensus 159 P~----iWsP~F~~~~-~~~l~~~~~~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aY---R~~P~------~v~ 224 (364)
T PF10933_consen 159 PH----IWSPRFLDQR-IAQLPEHGLRFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAY---RADPD------AVE 224 (364)
T ss_pred Cc----cCCchhHHHH-HHhhhhcCCccccccCCCCceEEEecCCceEEeecCccHHHHHHHH---HhChh------hcc
Confidence 62 1111111110 11111 13344431 1122222111111100011223344443 34444 266
Q ss_pred EEEEeCCCCCchHHHHHHHHHHcCC-CCccEEEccCcccHHHHHHH-cCEEEEcCccCcCCccHHHHHHHHcCCCEEEcC
Q 004092 379 VMILSGDSTSNYSVVIEAIAHNLHY-PLGVVKHMAAEGDVDSVLNT-ADVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456 (774)
Q Consensus 379 LvIvGG~~~e~Y~~~L~~la~~lgL-~~~~V~flG~~~dl~~~l~a-aDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd 456 (774)
.+.+.....-+-...+..++..+.+ .++...|.|.. +++.+++. .|++| .-.||. +.-..-.||+--|=|.|-.
T Consensus 225 ~~~V~Nt~~~ke~~~F~~f~~~ldlvr~gkasfegR~-~~p~fla~~tD~Vv-SHqWeN-~lNYlY~daLyggYPLVHN- 300 (364)
T PF10933_consen 225 HVYVTNTYHLKEHPTFVNFANSLDLVRDGKASFEGRF-DFPDFLAQHTDAVV-SHQWEN-PLNYLYYDALYGGYPLVHN- 300 (364)
T ss_pred eEEEecchhhhcCHHHHHHHHhhHHhhcCeeEEeeec-ChHHHHHhCCCEEE-eccccc-hhhHHHHHHHhcCCCcccC-
Confidence 6666621111112566777887776 44578888865 77888775 56665 446765 7788899999999998863
Q ss_pred CcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHH--HHHHHHHHH
Q 004092 457 LSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMAL--ETIEGYAML 524 (774)
Q Consensus 457 ~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~--~~a~~y~~L 524 (774)
..++.| .|+..+..|+.+=++++.+.+.+. +...+...+.+++....++.. ..+..|.+.
T Consensus 301 ----S~~l~d--~GYYY~~fD~~~G~r~L~~A~~~H--D~~~~~Y~~ra~~~l~~~~p~n~~nv~~y~~~ 362 (364)
T PF10933_consen 301 ----SPLLKD--VGYYYPDFDAFEGARQLLRAIREH--DADLDAYRARARRLLDRLSPENPANVRAYEAR 362 (364)
T ss_pred ----cchhcc--cCcCCCCccHHHHHHHHHHHHHHc--cccHHHHHHHHHHHHHhhCCCCHHHHHHHHHh
Confidence 345555 799999999999999999888641 456677888888888766443 345555544
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=84.53 E-value=14 Score=42.74 Aligned_cols=79 Identities=14% Similarity=-0.008 Sum_probs=48.4
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----ccccccc-CccEEEEc-------
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDD-RVNGYLFP------- 474 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~d-g~~G~Lv~------- 474 (774)
++.+.++..+ .++|+...+-.+-+.. | -++++||+.+|+|+|+-+..+ ...++.+ -..|+-+.
T Consensus 333 ~g~i~~W~PQ-~~IL~H~~vg~FvTH~---G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~ 407 (468)
T PLN02207 333 RGMICGWSPQ-VEILAHKAVGGFVSHC---G-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHS 407 (468)
T ss_pred CeEEEEeCCH-HHHhcccccceeeecC---c-cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccccccc
Confidence 5666677633 3466665553333321 2 347799999999999966543 2333332 23455321
Q ss_pred --CCCHHHHHHHHHHHHH
Q 004092 475 --KENIKALTHIILQVIT 490 (774)
Q Consensus 475 --~~d~e~La~aI~~Ll~ 490 (774)
.-+.++++++|.+++.
T Consensus 408 ~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 408 DEIVNANEIETAIRCVMN 425 (468)
T ss_pred CCcccHHHHHHHHHHHHh
Confidence 1267899999999997
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=84.50 E-value=5.6 Score=48.57 Aligned_cols=144 Identities=12% Similarity=0.027 Sum_probs=90.1
Q ss_pred CCCCCEEEEEEecccccccccccHHH-HHHHHH---HchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCC-
Q 004092 330 FKPDDLVIAIVGTQFMYRGLWLEHAL-ILRALL---PLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHY- 403 (774)
Q Consensus 330 l~~~~~vIl~vGsrl~~~KgiKg~~l-LLeA~~---~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL- 403 (774)
++++...++++= |+..- |.+.+ ++..+. ++++ .|+ ..-.+..+++.| ..........+.+++..+.-
T Consensus 526 ldp~slfdvq~K-R~heY---KRq~LNil~ii~~y~~i~~-~p~--~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~ 598 (797)
T cd04300 526 VDPDSLFDVQVK-RIHEY---KRQLLNVLHIIHLYNRIKE-NPN--ADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADV 598 (797)
T ss_pred cCCCccEEEEee-echhh---hhhhhHHHhhHHHHHHHHh-CCC--cCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHH
Confidence 456666666666 66665 88888 555544 4433 232 122346777777 32232233334344332211
Q ss_pred ------CCc--cEEEcc-Cc-ccHHHHHHHcCEEEEcCc--cCcCCccHHHHHHHHcCCCEEEcCCccccccccc--Ccc
Q 004092 404 ------PLG--VVKHMA-AE-GDVDSVLNTADVVIYGSF--LEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDD--RVN 469 (774)
Q Consensus 404 ------~~~--~V~flG-~~-~dl~~~l~aaDI~V~PS~--~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~d--g~~ 469 (774)
-.+ +|.|+. +. +-...++.+|||-..-|. .|. -|..=+-+|.-|.+.++|--|...|+.++ ++|
T Consensus 599 in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EA--SGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN 676 (797)
T cd04300 599 VNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEA--SGTGNMKFMLNGALTIGTLDGANVEIAEEVGEEN 676 (797)
T ss_pred hccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccc--cCCchhhHHhcCceeeecccchhHHHHHHhCcCc
Confidence 111 467765 33 556778999999998774 453 45555899999999999999999998866 789
Q ss_pred EEEEcCCCHHHHHH
Q 004092 470 GYLFPKENIKALTH 483 (774)
Q Consensus 470 G~Lv~~~d~e~La~ 483 (774)
+++|-. +++++.+
T Consensus 677 ~fiFG~-~~~ev~~ 689 (797)
T cd04300 677 IFIFGL-TAEEVEA 689 (797)
T ss_pred EEEeCC-CHHHHHH
Confidence 999965 4555443
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=83.87 E-value=66 Score=34.52 Aligned_cols=87 Identities=21% Similarity=0.180 Sum_probs=53.7
Q ss_pred HHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcC
Q 004092 353 HALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGS 431 (774)
Q Consensus 353 ~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS 431 (774)
.+.+.+++..+.++.. .+++++. .... + ....+++...+.-.. .|......+++..+++.||++|...
T Consensus 190 ~~~l~~~l~~l~~~~g--------~~v~~i~~~~~~-D-~~~~~~l~~~~~~~~-~i~~~~~~~e~~~~i~~~~~vI~~R 258 (298)
T TIGR03609 190 LLRLLRALDRLQRDTG--------AFVLFLPFQQPQ-D-LPLARALRDQLLGPA-EVLSPLDPEELLGLFASARLVIGMR 258 (298)
T ss_pred HHHHHHHHHHHHHhhC--------CeEEEEeCCcch-h-HHHHHHHHHhcCCCc-EEEecCCHHHHHHHHhhCCEEEEec
Confidence 4566777777765532 4555555 2211 1 144455555443333 4432223478888999999888776
Q ss_pred ccCcCCccHHHHHHHHcCCCEEEcCC
Q 004092 432 FLEEQTFPEILVKALCFRKPIIAPDL 457 (774)
Q Consensus 432 ~~E~qGfp~~llEAMA~G~PVIatd~ 457 (774)
++ .++-|+.+|+|+|+-.+
T Consensus 259 lH-------~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 259 LH-------ALILAAAAGVPFVALSY 277 (298)
T ss_pred hH-------HHHHHHHcCCCEEEeec
Confidence 55 46789999999997543
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=82.94 E-value=10 Score=41.80 Aligned_cols=104 Identities=13% Similarity=0.215 Sum_probs=63.9
Q ss_pred CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEc
Q 004092 332 PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHM 411 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~fl 411 (774)
.+..+++..|+.. +.|.|. .+...+.+..+.++ . ..++++||+..++ .+..+++.+..+-+. .+.+.
T Consensus 180 ~~~~i~i~p~a~~-~~K~Wp-~e~~~~l~~~l~~~--~-------~~ivl~g~p~~~e-~~~~~~i~~~~~~~~-~~~l~ 246 (344)
T TIGR02201 180 GQNYIVIQPTSRW-FFKCWD-NDRFSALIDALHAR--G-------YEVVLTSGPDKDE-LAMVNEIAQGCQTPR-VTSLA 246 (344)
T ss_pred CCCEEEEeCCCCc-cccCCC-HHHHHHHHHHHHhC--C-------CeEEEecCCCHHH-HHHHHHHHhhCCCCc-ccccC
Confidence 3455677777544 444443 44555666565443 2 6888999654211 022344444333233 35567
Q ss_pred cCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEc
Q 004092 412 AAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAP 455 (774)
Q Consensus 412 G~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIat 455 (774)
|.. .++..+++.||++|..- +..+-=|-|+|+|+|+-
T Consensus 247 g~~sL~el~ali~~a~l~Vs~D-------SGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 247 GKLTLPQLAALIDHARLFIGVD-------SVPMHMAAALGTPLVAL 285 (344)
T ss_pred CCCCHHHHHHHHHhCCEEEecC-------CHHHHHHHHcCCCEEEE
Confidence 743 89999999999999763 34556788999999984
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=82.47 E-value=22 Score=38.71 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=59.3
Q ss_pred CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEE-eCCCCCchHHHHHHHHHHcCCCCccEEE
Q 004092 332 PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMIL-SGDSTSNYSVVIEAIAHNLHYPLGVVKH 410 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIv-GG~~~e~Y~~~L~~la~~lgL~~~~V~f 410 (774)
..+.+++..|+.. ..|.| ..+...+.+..+.++ . ..+++. |++.+. +..+++++ .. . .+.+
T Consensus 177 ~~~~i~~~~~~s~-~~k~W-p~e~~a~li~~l~~~--~-------~~ivl~~G~~~e~---~~~~~i~~--~~-~-~~~l 238 (322)
T PRK10964 177 AGPYLVFLHATTR-DDKHW-PEAHWRELIGLLAPS--G-------LRIKLPWGAEHEE---QRAKRLAE--GF-P-YVEV 238 (322)
T ss_pred CCCeEEEEeCCCc-ccccC-CHHHHHHHHHHHHHC--C-------CeEEEeCCCHHHH---HHHHHHHc--cC-C-ccee
Confidence 3445555566433 33334 444455666666443 2 577776 544321 33344433 22 2 4667
Q ss_pred ccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEc
Q 004092 411 MAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAP 455 (774)
Q Consensus 411 lG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIat 455 (774)
.|.. .++..+++.||++|..- +..+-=|-|+|+|+|+-
T Consensus 239 ~g~~sL~elaali~~a~l~I~nD-------SGp~HlA~A~g~p~val 278 (322)
T PRK10964 239 LPKLSLEQVARVLAGAKAVVSVD-------TGLSHLTAALDRPNITL 278 (322)
T ss_pred cCCCCHHHHHHHHHhCCEEEecC-------CcHHHHHHHhCCCEEEE
Confidence 7744 88999999999999764 33556788999999984
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=81.81 E-value=6 Score=48.22 Aligned_cols=145 Identities=12% Similarity=0.034 Sum_probs=91.4
Q ss_pred CCCCCEEEEEEecccccccccccHHH-HHHHHHHchh--hcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcC---
Q 004092 330 FKPDDLVIAIVGTQFMYRGLWLEHAL-ILRALLPLFS--EVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLH--- 402 (774)
Q Consensus 330 l~~~~~vIl~vGsrl~~~KgiKg~~l-LLeA~~~L~~--~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lg--- 402 (774)
++++....+++= |+..- |.+.+ ++..+..+.+ ..|+ ..-.+..+++.| ..........+.+++....
T Consensus 523 ldp~slfdvq~K-R~heY---KRq~LNil~ii~~y~~i~~~p~--~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~i 596 (794)
T TIGR02093 523 VDPNSIFDVQVK-RLHEY---KRQLLNVLHVIYLYNRIKEDPP--KDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVV 596 (794)
T ss_pred cCccccchhhhe-echhh---hHHHHHHhhhHHHHHHHHhCCC--cCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Confidence 445555556665 66655 88888 6665544432 2332 111246788888 3333333344444444332
Q ss_pred -----CCC-ccEEEcc-Cc-ccHHHHHHHcCEEEEcCc--cCcCCccHHHHHHHHcCCCEEEcCCccccccccc--CccE
Q 004092 403 -----YPL-GVVKHMA-AE-GDVDSVLNTADVVIYGSF--LEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDD--RVNG 470 (774)
Q Consensus 403 -----L~~-~~V~flG-~~-~dl~~~l~aaDI~V~PS~--~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~d--g~~G 470 (774)
+.+ -+|.|+. +. +-...++.+||+-..-|. .| .-|..=+-+|.-|.+.|+|--|...|+.++ ++|+
T Consensus 597 N~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~E--ASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~ 674 (794)
T TIGR02093 597 NNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKE--ASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENI 674 (794)
T ss_pred ccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCcc--ccCcchhHHHhcCcceeecccchhHHHHHHhCcccE
Confidence 211 1477775 33 556778999999998774 45 345555899999999999999999998876 7899
Q ss_pred EEEcCCCHHHHHH
Q 004092 471 YLFPKENIKALTH 483 (774)
Q Consensus 471 ~Lv~~~d~e~La~ 483 (774)
++|-. +++++.+
T Consensus 675 fiFG~-~~~ev~~ 686 (794)
T TIGR02093 675 FIFGL-TVEEVEA 686 (794)
T ss_pred EEcCC-CHHHHHH
Confidence 99864 5555544
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=81.76 E-value=21 Score=38.75 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=59.9
Q ss_pred CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEE
Q 004092 332 PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKH 410 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~f 410 (774)
+++.+++..|+.. ..|.| ..+...+.+..+.++ + ..++++| ++.+. +..+++.+ .+++ ..+
T Consensus 178 ~~~~i~i~~gas~-~~K~w-p~e~~~~l~~~l~~~--~-------~~~vl~~g~~~e~---~~~~~i~~--~~~~--~~l 239 (319)
T TIGR02193 178 PAPYAVLLHATSR-DDKTW-PEERWRELARLLLAR--G-------LQIVLPWGNDAEK---QRAERIAE--ALPG--AVV 239 (319)
T ss_pred CCCEEEEEeCCCc-ccCCC-CHHHHHHHHHHHHHC--C-------CeEEEeCCCHHHH---HHHHHHHh--hCCC--Cee
Confidence 3556777777543 44444 334445555555443 2 6777775 44321 23344444 2333 345
Q ss_pred ccC--cccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEc
Q 004092 411 MAA--EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAP 455 (774)
Q Consensus 411 lG~--~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIat 455 (774)
.|. ..++..+++.||++|.+- +..+-=|-|+|+|+|+-
T Consensus 240 ~g~~sL~el~ali~~a~l~I~~D-------Sgp~HlAaa~g~P~i~l 279 (319)
T TIGR02193 240 LPKMSLAEVAALLAGADAVVGVD-------TGLTHLAAALDKPTVTL 279 (319)
T ss_pred cCCCCHHHHHHHHHcCCEEEeCC-------ChHHHHHHHcCCCEEEE
Confidence 673 388899999999999764 33445677889999983
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=81.37 E-value=5.1 Score=48.80 Aligned_cols=145 Identities=10% Similarity=0.014 Sum_probs=89.8
Q ss_pred CCCCCEEEEEEecccccccccccHHH-HHHHHHHchh--hcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcC--C
Q 004092 330 FKPDDLVIAIVGTQFMYRGLWLEHAL-ILRALLPLFS--EVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLH--Y 403 (774)
Q Consensus 330 l~~~~~vIl~vGsrl~~~KgiKg~~l-LLeA~~~L~~--~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lg--L 403 (774)
++++...++++= |+..- |.+.+ ++..+..+.+ +.|+ ..-.+..+++.| ..........+.+++.... +
T Consensus 525 ldp~slfdvq~k-R~heY---KRq~Lnil~ii~~y~~i~~~p~--~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~i 598 (798)
T PRK14985 525 INPQAIFDVQIK-RLHEY---KRQHLNLLHILALYKEIRENPQ--ADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVI 598 (798)
T ss_pred cCchhcchhhHh-hhhhh---hhhhhHhhhhHHHHHHHHhCCC--cCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHh
Confidence 445554555555 66655 88877 6665544432 2232 112447888888 3333333344444444322 0
Q ss_pred C-----Cc--cEEEcc-Cc-ccHHHHHHHcCEEEEcCc--cCcCCccHHHHHHHHcCCCEEEcCCccccccccc--CccE
Q 004092 404 P-----LG--VVKHMA-AE-GDVDSVLNTADVVIYGSF--LEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDD--RVNG 470 (774)
Q Consensus 404 ~-----~~--~V~flG-~~-~dl~~~l~aaDI~V~PS~--~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~d--g~~G 470 (774)
. .+ +|.|+. +. +-...++.+||+-..-|. .| ..|..=+-||.-|.+.|+|--|...|+.++ ++||
T Consensus 599 n~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~E--ASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~ 676 (798)
T PRK14985 599 NNDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKE--ASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENI 676 (798)
T ss_pred cCChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCcc--ccCcchhHHHhcCceeeecccchHHHHHHHhCcCcE
Confidence 0 11 477776 33 556778999999998774 45 345555899999999999999998888865 7799
Q ss_pred EEEcCCCHHHHHH
Q 004092 471 YLFPKENIKALTH 483 (774)
Q Consensus 471 ~Lv~~~d~e~La~ 483 (774)
+++-. +++++.+
T Consensus 677 f~fG~-~~~ev~~ 688 (798)
T PRK14985 677 FIFGH-TVEQVKA 688 (798)
T ss_pred EEeCC-CHHHHHH
Confidence 99964 4555443
|
|
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=80.98 E-value=39 Score=39.03 Aligned_cols=162 Identities=12% Similarity=0.125 Sum_probs=86.8
Q ss_pred CCEEEEEEeccc----ccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCC--
Q 004092 333 DDLVIAIVGTQF----MYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPL-- 405 (774)
Q Consensus 333 ~~~vIl~vGsrl----~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~-- 405 (774)
...+.+.+|+.. -+. +-...+..|+..+ ++ +.|++.= ++... . +.+ ++.+
T Consensus 277 ~~vvyvSfGS~~~~~~lp~---~~~~~l~~~l~~~----~~-------~~FiW~~~~~~~~----~---~~~--~~~~~~ 333 (496)
T KOG1192|consen 277 HSVVYISFGSMVNSADLPE---EQKKELAKALESL----QG-------VTFLWKYRPDDSI----Y---FPE--GLPNRG 333 (496)
T ss_pred CCeEEEECCcccccccCCH---HHHHHHHHHHHhC----CC-------ceEEEEecCCcch----h---hhh--cCCCCC
Confidence 456777788664 333 3444455555555 23 5655555 33220 0 222 3332
Q ss_pred -ccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCc----cccccc-ccCccEEEEcC-CCH
Q 004092 406 -GVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLS----NIRKYV-DDRVNGYLFPK-ENI 478 (774)
Q Consensus 406 -~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g----gi~EiV-~dg~~G~Lv~~-~d~ 478 (774)
++|...++..+..-++....+-++-+. .|++.+ +||+.+|+|+|+.+.- -....+ +.+..+++... ...
T Consensus 334 ~~nV~~~~W~PQ~~lll~H~~v~~FvTH---gG~nSt-~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~ 409 (496)
T KOG1192|consen 334 RGNVVLSKWAPQNDLLLDHPAVGGFVTH---GGWNST-LESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVS 409 (496)
T ss_pred cCceEEecCCCcHHHhcCCCcCcEEEEC---CcccHH-HHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCc
Confidence 369998888666544332223333332 156665 9999999999964432 233344 45554444333 122
Q ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 004092 479 KALTHIILQVITNGKISPFARNIASIGRRSV-KNLMALETIEGYAMLL 525 (774)
Q Consensus 479 e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~ 525 (774)
..+.+++..++.+ ++..+...+-+.... +-.+. +.+..+.+..
T Consensus 410 ~~~~~~~~~il~~---~~y~~~~~~l~~~~~~~p~~~-~~~~~~~e~~ 453 (496)
T KOG1192|consen 410 EELLEAIKEILEN---EEYKEAAKRLSEILRDQPISP-ELAVKWVEFV 453 (496)
T ss_pred HHHHHHHHHHHcC---hHHHHHHHHHHHHHHcCCCCH-HHHHHHHHHH
Confidence 3388999999988 665555444444333 23555 5555554433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.6 bits (164), Expect = 1e-11
Identities = 92/605 (15%), Positives = 174/605 (28%), Gaps = 178/605 (29%)
Query: 262 SGQLELLN-DWKKVFNRATVVVFP-DYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDL 319
+G+ + D VF A V F V M S I S +A +
Sbjct: 11 TGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSK----DAVSGTLR 66
Query: 320 YNDTVRVKMGFKPDDLVIAIVGT--QFMYRGLWLEHALILRALLPLFSEVSVENESNSPI 377
T+ K +++V V + Y+ +L + P + +
Sbjct: 67 LFWTLLSK----QEEMVQKFVEEVLRINYK--FLMSPIKTEQRQPSMMTRMYIEQRD--- 117
Query: 378 KVMILSGDSTSNYSVVIEAIAHNLHYPL-------GVVKH-MAAEGDVDSVLNTADVV-- 427
+ + Y+V L L V+ + G + + DV
Sbjct: 118 -RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK--TWV-ALDVCLS 173
Query: 428 ----------IY----GSFLEEQTFPEILVKALCFRKPIIAPDL-------SNIRKYVDD 466
I+ + +T E+L K L ++ I P+ SNI+ +
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQK-LLYQ---IDPNWTSRSDHSSNIKLRIHS 229
Query: 467 ---RVNGYLFPKENIKALTHIILQ------------------VIT-NGKISPFARNIASI 504
+ L K L ++L + T +++ F +
Sbjct: 230 IQAELRRLLKSKPYENCL--LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287
Query: 505 GRRSVKNLMALETIEGYAMLLENVL-----KLPSEVA--FPKSIKELSPKLKEE---WQ- 553
+ M L E + LL L LP EV P+ + ++ +++ W
Sbjct: 288 HISLDHHSMTLTPDEVKS-LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346
Query: 554 W---------HLFEAFLN--STHEDRTSRSNRFLNQIELLQSNHTERDSYLPVPETDDSF 602
W + E+ LN E R + +++ + + +P
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYR-----KMFDRLSVFPPS-------AHIPT---IL 391
Query: 603 LYDIW---KEEKDIEMLN--VRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDLHE 657
L IW + + ++N + E++ K+ +Y K + LH
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS----IYLELKVKLENEYALHR 447
Query: 658 RDEGELERTGQPLC--------------IYEPYLGEGTWPFLHHRSLYRGIGLSSKGRRP 703
++ P Y ++G HH L +
Sbjct: 448 S---IVDHYNIPKTFDSDDLIPPYLDQYFYS-HIG-------HH--------LKNI---- 484
Query: 704 RRDDVDAPSRLPLLNNPYYRDILGEYGAFFAIANRIDRLHKNAWIGFQSWRATANKFRIH 763
+ R+ L+ +R F + +I R AW S T + + +
Sbjct: 485 EHPERMTLFRMVFLD---FR---------F-LEQKI-RHDSTAWNASGSILNTLQQLKFY 530
Query: 764 KIHIF 768
K +I
Sbjct: 531 KPYIC 535
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 2e-09
Identities = 106/659 (16%), Positives = 202/659 (30%), Gaps = 193/659 (29%)
Query: 25 ERQHSF---LQRNRSRFSRFLFFKK-LDYLLWICTVAVFLFFVVIFQLFLPGSVTVMDES 80
E Q+ + L F K D I + ++ D
Sbjct: 13 EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIM-----SK------DAV 61
Query: 81 QGSLRDFDKV---PADL--MFLKEMGLLDFGEEVTFLPLKLMEKFQSEDKDVNL-TSVFH 134
G+LR F + ++ F++E+ +++ FL M ++E + ++ T ++
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYK----FL----MSPIKTEQRQPSMMTRMYI 113
Query: 135 RKLHRFGYRKPQLALVFPDLLID-PQQLQMVTIAI-ALREIGYAIQVY--------SLED 184
+ R Y Q VF + Q + A+ LR + + +
Sbjct: 114 EQRDRL-YNDNQ---VFAKYNVSRLQPYLKLRQALLELRPAKN-VLIDGVLGSGKTWV-- 166
Query: 185 GRAHEVWRNIGVPVAILQTGREKASF-VNWLNY------DGIL--VNSLEAKVVISNIMQ 235
A +V + V + K F + WLN + +L + L ++ N
Sbjct: 167 --ALDVCLSYKV--------QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID-PNWTS 215
Query: 236 EPFKSLPLVWTIHEGTLATR----ARNYASSGQLELLND-WK----KVFN---------R 277
S + IH R ++ Y + L +L + FN R
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENC--LLVLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 278 ATVVVFPDYVLPMMYSAFDAGNYYVIP-GSPAKAWEADTNMDLYNDTVRVKMGFKPDDL- 335
V D++ A I + D L + +P DL
Sbjct: 274 FKQVT--DFL--------SAATTTHISLDHHSMTLTPDEVKSLLLKYL----DCRPQDLP 319
Query: 336 ---------VIAIVGT----------QFMYRGLW-LEHAL--ILRALLP-----LFSEVS 368
++I+ + + L + L L P +F +S
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379
Query: 369 V-ENESNSPIKVM-ILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADV 426
V ++ P ++ ++ D + + + + LH K+ E +
Sbjct: 380 VFPPSAHIPTILLSLIWFDVIKS---DVMVVVNKLH------KYSLVEKQPKEST----I 426
Query: 427 VIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVD------DRVNGYLF------- 473
I +LE + E AL + I+ D NI K D ++ Y +
Sbjct: 427 SIPSIYLELKVKLENE-YAL--HRSIV--DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481
Query: 474 ----PKENIKALTHIILQV--ITNGKISPFARNIASIGRRSVKNLMA-LETIEGYAMLLE 526
E + + L + KI + A S+ N + L+ + Y + +
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQ-KIR--HDSTAWNASGSILNTLQQLKFYKPY--ICD 536
Query: 527 NVLKLPSEVAFPKSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQSN 585
N P +I + PK++E +L + S + D L +I L+ +
Sbjct: 537 ND---PKYERLVNAILDFLPKIEE----NL----ICSKYTD--------LLRIALMAED 576
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 60/383 (15%), Positives = 124/383 (32%), Gaps = 38/383 (9%)
Query: 159 QQLQMVTIAIALREIGYAIQVYSLE-DGRAHEVWRNIGVPVAILQTGREKASFVNWL--- 214
Q + IA + G+ ++VY+ +G + + I VPV A + W+
Sbjct: 16 LQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNH 75
Query: 215 --NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWK 272
+ V + V G L Y E
Sbjct: 76 LKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEK-GFLYRLTSRYRHYAAFE--RATF 132
Query: 273 KVFNRATVVVFPDYVLPMMYSAF--DAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGF 330
+ +++ D + + + + ++P + + + R K G
Sbjct: 133 EQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGI 192
Query: 331 KPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNY 390
K ++ VG+ F +G + AL S+ + ++ D +
Sbjct: 193 KEQQNLLLQVGSDFGRKG----VDRSIEAL------ASLPESLRHNTLLFVVGQDKPRKF 242
Query: 391 SVVIEAIAHNLHYPLGV---VKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALC 447
EA+A L GV V + DV ++ AD++++ ++ E +L++A+
Sbjct: 243 ----EALAEKL----GVRSNVHFFSGRNDVSELMAAADLLLHPAYQE--AAGIVLLEAIT 292
Query: 448 FRKPIIAPDLSNIRKYVDDRVNGYLFPK-ENIKALTHIILQVITNGKISPFARNIASIGR 506
P++ + Y+ D G + + + + L ++ + +T SP A R
Sbjct: 293 AGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ---SPLRMAWAENAR 349
Query: 507 RSVKNLMALETIEGYAMLLENVL 529
E A ++ L
Sbjct: 350 HYADTQDLYSLPEKAADIITGGL 372
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 9e-10
Identities = 44/304 (14%), Positives = 104/304 (34%), Gaps = 54/304 (17%)
Query: 239 KSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFP-DYVLPMMYSAF-D 296
+ + +V T+H GT T + S L + ++ VV ++ +
Sbjct: 124 ERIKIVTTLH-GTDITVLGSDPSLNNLI-----RFGIEQSDVVTAVSHSLINETHELVKP 177
Query: 297 AGNYYVIP-GSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYR-GLWLEHA 354
+ + + + ++ + G + ++ + F
Sbjct: 178 NKDIQTVYNFIDERVYFKRDM-----TQLKKEYGISESEKILIHIS-NFRKVKR----VQ 227
Query: 355 LILRALLPLFSEVSVENESNSPIKVMIL-SGDSTSNYSVVIEAIAHNLHYP-----LGVV 408
+++A F+++ + K++++ G I + NLH LG
Sbjct: 228 DVVQA----FAKIV----TEVDAKLLLVGDGPEFCT----ILQLVKNLHIEDRVLFLGKQ 275
Query: 409 KHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRV 468
+V +L +D+++ S E +F +L++A+ P I + I + +
Sbjct: 276 D------NVAELLAMSDLMLLLSEKE--SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGD 327
Query: 469 NGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVK-----NLMALETIEGYAM 523
GYL + + +Q++ + + RN+ R SV + + Y
Sbjct: 328 TGYLCEVGDTTGVADQAIQLLKDEE---LHRNMGERARESVYEQFRSEKIVSQYETIYYD 384
Query: 524 LLEN 527
+L +
Sbjct: 385 VLRD 388
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 6e-08
Identities = 57/390 (14%), Positives = 134/390 (34%), Gaps = 64/390 (16%)
Query: 167 AIALREIGYAIQVYSLEDGRAHEVWR------NI--GVPVAILQTGREKASFVNWLNYDG 218
LR IG + + +E E + N G L T K ++N +
Sbjct: 63 VPLLRSIGIEARWFVIEGP--TEFFNVTKTFHNALQGNESLKL-TEEMKELYLNVNRENS 119
Query: 219 ILVNSLEAKVVISNIMQEPF------KSLPLVWTIHEGTLATRARNYASSGQLELLNDWK 272
++ V+ + Q K P +W H SS E +
Sbjct: 120 KFIDLSSFDYVLVHDPQPAALIEFYEKKSPWLWRCHIDL---------SSPNREFWEFLR 170
Query: 273 KVFNRATVVVF--PDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDT---VRVK 327
+ + +F P+YV P D ++P P+ ++ N++L + +
Sbjct: 171 RFVEKYDRYIFHLPEYVQPE----LDRNKAVIMP--PSIDPLSEKNVELKQTEILRILER 224
Query: 328 MGFKPDDLVIAIVGTQFMYR-GLWLEHALILRALLPLFSEVSVENESNSPIKVMILSG-- 384
P+ +I V +F G ++ + +V + ++++++
Sbjct: 225 FDVDPEKPIITQVS-RFDPWKG----IFDVIEI----YRKVKEKIPG---VQLLLVGVMA 272
Query: 385 ----DSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPE 440
+ + + I + + +V++ +DV++ S E F
Sbjct: 273 HDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIRE--GFGL 330
Query: 441 ILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARN 500
+ +A+ KP+I + I+ + D G+L + ++L ++ + ++ ++
Sbjct: 331 TVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKHPEV---SKE 385
Query: 501 IASIGRRSVKNLMALETI-EGYAMLLENVL 529
+ + + V+ + E Y +L ++
Sbjct: 386 MGAKAKERVRKNFIITKHMERYLDILNSLG 415
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 4e-05
Identities = 10/62 (16%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 607 WKEE--KDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDLHE------R 658
W+EE K ++ L+ + E+E +++ + W++ ++ N + +
Sbjct: 90 WREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQP 149
Query: 659 DE 660
D
Sbjct: 150 DA 151
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 774 | |||
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.97 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.96 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.95 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.93 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.93 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.93 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.92 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.92 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.91 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.91 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.89 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.87 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.87 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.87 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.81 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.81 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.77 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.76 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.71 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.71 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.7 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.68 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.67 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.63 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.59 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.53 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.44 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.36 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.32 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.23 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.14 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.09 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.07 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.01 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.97 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.69 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.09 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.01 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.96 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 97.81 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.15 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 96.74 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 96.35 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 96.17 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 95.67 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 95.49 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 95.43 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 95.12 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 94.9 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 91.94 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 87.65 |
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=347.07 Aligned_cols=363 Identities=15% Similarity=0.158 Sum_probs=277.5
Q ss_pred CCCeEEEEecCC---CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh------------------hhcCccEEEc
Q 004092 143 RKPQLALVFPDL---LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW------------------RNIGVPVAIL 201 (774)
Q Consensus 143 rk~rialV~~~L---~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~------------------~~~gi~i~~l 201 (774)
|++||++|.+.. ..||.+.++..+++.|.++||+|+|++.......... ...++++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 688999999884 4599999999999999999999999997653321110 2345555544
Q ss_pred cc----------------ch-------hHHHHhh-----hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhh
Q 004092 202 QT----------------GR-------EKASFVN-----WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLA 253 (774)
Q Consensus 202 ~~----------------~~-------~l~~~i~-----~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~ 253 (774)
+. .. .....++ ..+||+||+|++... .+..++. +..++|+|+++|+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~-~~~~~~~-~~~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV-FAGALIK-KYFKIPAVFTIHRLNKS 158 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGH-HHHHHHH-HHHCCCEEEEESCCCCC
T ss_pred cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhh-hhHHHHh-hccCCCEEEEecccccc
Confidence 33 00 1111222 349999999987763 4444443 35679999999984311
Q ss_pred hhHHHhh-hhh-----hhHHHHHHHHHHHhccEEEccCCcchhhcc---cCCCCCEEEeCCCCCCcccccccC-----ch
Q 004092 254 TRARNYA-SSG-----QLELLNDWKKVFNRATVVVFPDYVLPMMYS---AFDAGNYYVIPGSPAKAWEADTNM-----DL 319 (774)
Q Consensus 254 ~~~~k~~-~~~-----~~~li~~~~~~~~~a~~vv~ps~~~~~i~~---~v~~~ki~vIpg~gvd~~~~~~~~-----~~ 319 (774)
....... ... ........+..+..++.+++.+........ .....++.+||+ |+|...+.+.. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~n-gvd~~~~~~~~~~~~~~~ 237 (439)
T 3fro_A 159 KLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFN-GIDCSFWNESYLTGSRDE 237 (439)
T ss_dssp CEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCC-CCCTTTSCGGGSCSCHHH
T ss_pred cCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCC-CCCchhcCcccccchhhh
Confidence 0000000 000 000012334456678877777665332222 245688999994 88875544331 12
Q ss_pred hhHHHHHHhCCCCCCEEEEEEecccc-cccccccHHHHHHHHHHchhhc--ccCCCCCCCeEEEEEe-CCCCCchHHHHH
Q 004092 320 YNDTVRVKMGFKPDDLVIAIVGTQFM-YRGLWLEHALILRALLPLFSEV--SVENESNSPIKVMILS-GDSTSNYSVVIE 395 (774)
Q Consensus 320 ~k~~lR~~lgl~~~~~vIl~vGsrl~-~~KgiKg~~lLLeA~~~L~~~~--p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~ 395 (774)
.+..++++++++++ ++++++| ++. +. ||++.+++|++.+.+++ ++ ++|+|+| |+ +.|.+.++
T Consensus 238 ~~~~~~~~~~~~~~-~~i~~~G-~~~~~~---Kg~~~li~a~~~l~~~~~~~~-------~~l~i~G~g~--~~~~~~l~ 303 (439)
T 3fro_A 238 RKKSLLSKFGMDEG-VTFMFIG-RFDRGQ---KGVDVLLKAIEILSSKKEFQE-------MRFIIIGKGD--PELEGWAR 303 (439)
T ss_dssp HHHHHHHHHTCCSC-EEEEEEC-CSSCTT---BCHHHHHHHHHHHHTSGGGGG-------EEEEEECCCC--HHHHHHHH
T ss_pred hHHHHHHHcCCCCC-cEEEEEc-cccccc---ccHHHHHHHHHHHHhcccCCC-------eEEEEEcCCC--hhHHHHHH
Confidence 36788999999888 9999999 887 77 99999999999999877 77 9999999 65 34668899
Q ss_pred HHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEE
Q 004092 396 AIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLF 473 (774)
Q Consensus 396 ~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv 473 (774)
+++++++ + .+.|.|++ +++..+|++||++|+||..| |||++++||||||+|||+|+.+|+.|++.++ +|+++
T Consensus 304 ~~~~~~~--~-~~~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~ 377 (439)
T 3fro_A 304 SLEEKHG--N-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV 377 (439)
T ss_dssp HHHHHCT--T-EEEECSCCCHHHHHHHHTTCSEEEECBSCC--SSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE
T ss_pred HHHhhcC--C-EEEEcCCCCHHHHHHHHHHCCEEEeCCCCC--CccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEe
Confidence 9999888 5 79999954 78999999999999999998 8999999999999999999999999999887 89999
Q ss_pred cCCCHHHHHHHHHHHHH-cCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Q 004092 474 PKENIKALTHIILQVIT-NGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKL 531 (774)
Q Consensus 474 ~~~d~e~La~aI~~Ll~-d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~~ 531 (774)
+++|+++++++|.++++ + ++.+++|++++++.+++|+|+.++++|.++|+++++.
T Consensus 378 ~~~d~~~la~~i~~ll~~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 378 KAGDPGELANAILKALELS---RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp CTTCHHHHHHHHHHHHHHT---TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred CCCCHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999 9 8999999999999998899999999999999998764
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=334.82 Aligned_cols=379 Identities=14% Similarity=0.147 Sum_probs=273.9
Q ss_pred cccCCCCCCCeEEEEecCCC---------CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh--hhhcCccEEEcccc
Q 004092 136 KLHRFGYRKPQLALVFPDLL---------IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV--WRNIGVPVAILQTG 204 (774)
Q Consensus 136 ~~~r~~~rk~rialV~~~L~---------~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~--~~~~gi~i~~l~~~ 204 (774)
+-..-+-+++||++|..... .||.+.++..+++.|.+.||+|+|++......... ....++.+..++..
T Consensus 12 ~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~ 91 (438)
T 3c48_A 12 SGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAG 91 (438)
T ss_dssp -------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCS
T ss_pred cCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCC
Confidence 34444667789999997653 49999999999999999999999999865421111 11234444443221
Q ss_pred -----------hh-------HHHH-hhhc-CccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhh--HHHhhhh
Q 004092 205 -----------RE-------KASF-VNWL-NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATR--ARNYASS 262 (774)
Q Consensus 205 -----------~~-------l~~~-i~~~-~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~--~~k~~~~ 262 (774)
.. +... ++.. +||+||+|.... ..+..++.. ..++|+|+++|+...... .......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~-~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~ 169 (438)
T 3c48_A 92 PYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLS-GQVGWLLRD-LWRIPLIHTAHTLAAVKNSYRDDSDTP 169 (438)
T ss_dssp CSSSCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHHHHHHHH-HHTCCEEEECSSCHHHHSCC----CCH
T ss_pred CccccchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccH-HHHHHHHHH-HcCCCEEEEecCCcccccccccccCCc
Confidence 00 1111 2222 599999998654 233333322 346899999997432210 0000000
Q ss_pred hhhHHHHHHHHHHHhccEEEccCCcchhh---cccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEE
Q 004092 263 GQLELLNDWKKVFNRATVVVFPDYVLPMM---YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAI 339 (774)
Q Consensus 263 ~~~~li~~~~~~~~~a~~vv~ps~~~~~i---~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~ 339 (774)
.........+..+..++.+++.+...... ..+++..++.+|| +|+|...+...........+++++++++.+++++
T Consensus 170 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~-ngvd~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~ 248 (438)
T 3c48_A 170 ESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVS-PGADVELYSPGNDRATERSRRELGIPLHTKVVAF 248 (438)
T ss_dssp HHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECC-CCCCTTTSCCC----CHHHHHHTTCCSSSEEEEE
T ss_pred chHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEec-CCccccccCCcccchhhhhHHhcCCCCCCcEEEE
Confidence 00001112234566788887776653222 1345667899999 4888744433322223458899999989999999
Q ss_pred EecccccccccccHHHHHHHHHHchhhcc--cCCCCCCCeEEEEEeC-CCCCchHHHHHHHHHHcCCCCccEEEccCc--
Q 004092 340 VGTQFMYRGLWLEHALILRALLPLFSEVS--VENESNSPIKVMILSG-DSTSNYSVVIEAIAHNLHYPLGVVKHMAAE-- 414 (774)
Q Consensus 340 vGsrl~~~KgiKg~~lLLeA~~~L~~~~p--~~~~~~~~v~LvIvGG-~~~e~Y~~~L~~la~~lgL~~~~V~flG~~-- 414 (774)
+| ++.+. ||++.+++|+..+.+++| + ++|+|+|+ .....+.+.++++++++++.+ +|.|+|++
T Consensus 249 ~G-~~~~~---Kg~~~li~a~~~l~~~~p~~~-------~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~-~v~~~g~~~~ 316 (438)
T 3c48_A 249 VG-RLQPF---KGPQVLIKAVAALFDRDPDRN-------LRVIICGGPSGPNATPDTYRHMAEELGVEK-RIRFLDPRPP 316 (438)
T ss_dssp ES-CBSGG---GCHHHHHHHHHHHHHHCTTCS-------EEEEEECCBC------CHHHHHHHHTTCTT-TEEEECCCCH
T ss_pred Ee-eeccc---CCHHHHHHHHHHHHhhCCCcc-------eEEEEEeCCCCCCcHHHHHHHHHHHcCCCC-cEEEcCCCCh
Confidence 99 88887 999999999999998876 5 99999994 222245578899999999988 99999988
Q ss_pred ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCC
Q 004092 415 GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKI 494 (774)
Q Consensus 415 ~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~ 494 (774)
+++..+|+.||++|+||..| |||++++|||+||+|||+++.+++.|++.++.+|++++++|+++++++|.++++|
T Consensus 317 ~~~~~~~~~adv~v~ps~~e--~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~--- 391 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNE--SFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD--- 391 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCC--SSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhCCEEEECcccc--CCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC---
Confidence 88999999999999999988 8999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcCCCC
Q 004092 495 SPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSE 534 (774)
Q Consensus 495 ~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~~~~~ 534 (774)
++.+++|++++++.+++|+|+.++++|.++|+++++.+..
T Consensus 392 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 392 DETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhccc
Confidence 9999999999999997799999999999999999876543
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=331.73 Aligned_cols=358 Identities=13% Similarity=0.131 Sum_probs=279.2
Q ss_pred CCCeEEEEecCCC--CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcc--hhhhhhcCccEEEcccc---------hhHHH
Q 004092 143 RKPQLALVFPDLL--IDPQQLQMVTIAIALREIGYAIQVYSLEDGRA--HEVWRNIGVPVAILQTG---------REKAS 209 (774)
Q Consensus 143 rk~rialV~~~L~--~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~--~~~~~~~gi~i~~l~~~---------~~l~~ 209 (774)
+++||++|.+.+. .||.+.++.++++.| .||+|+|++...... .......++++..++.. ..+..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMAE 80 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHHH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccccchhhHHHHHH
Confidence 5789999998665 799999999999999 699999999877554 33334556666655432 34566
Q ss_pred HhhhcCccEEEEcCCchhHHHHHHHhCCCCCCC-EEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc
Q 004092 210 FVNWLNYDGILVNSLEAKVVISNIMQEPFKSLP-LVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL 288 (774)
Q Consensus 210 ~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ip-vI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~ 288 (774)
+++..+||+||+|+......+..++. ..++| +|+++|+........ ...-...+..+..++.+++.+...
T Consensus 81 ~~~~~~~Dvv~~~~~~~~~~~~~~~~--~~~~~~~i~~~h~~~~~~~~~-------~~~~~~~~~~~~~~d~ii~~s~~~ 151 (394)
T 3okp_A 81 IIREREIDNVWFGAAAPLALMAGTAK--QAGASKVIASTHGHEVGWSML-------PGSRQSLRKIGTEVDVLTYISQYT 151 (394)
T ss_dssp HHHHTTCSEEEESSCTTGGGGHHHHH--HTTCSEEEEECCSTHHHHTTS-------HHHHHHHHHHHHHCSEEEESCHHH
T ss_pred HHHhcCCCEEEECCcchHHHHHHHHH--hcCCCcEEEEeccchhhhhhc-------chhhHHHHHHHHhCCEEEEcCHHH
Confidence 77888999999998766434444432 23465 899999754321111 111112344556778777776653
Q ss_pred hhh-cc-cCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhh
Q 004092 289 PMM-YS-AFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSE 366 (774)
Q Consensus 289 ~~i-~~-~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~ 366 (774)
... .. .....++.+|| +|+|...+.......+..++++++++++.++++++| ++.+. ||++.+++|+..+.++
T Consensus 152 ~~~~~~~~~~~~~~~vi~-ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---Kg~~~li~a~~~l~~~ 226 (394)
T 3okp_A 152 LRRFKSAFGSHPTFEHLP-SGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNS-RLVPR---KGQDSLIKAMPQVIAA 226 (394)
T ss_dssp HHHHHHHHCSSSEEEECC-CCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEES-CSCGG---GCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeEEec-CCcCHHHcCCCCchhhHHHHHhcCCCcCceEEEEEe-ccccc---cCHHHHHHHHHHHHhh
Confidence 222 11 22346889999 488875444434444778899999999989999999 78888 9999999999999998
Q ss_pred cccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCcc-------CcC
Q 004092 367 VSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFL-------EEQ 436 (774)
Q Consensus 367 ~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~-------E~q 436 (774)
+|+ ++|+|+| |+.. +.+++++ .++.+ +|.|+|++ +++..+|+.||++|+||.. |
T Consensus 227 ~~~-------~~l~i~G~g~~~----~~l~~~~--~~~~~-~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e-- 290 (394)
T 3okp_A 227 RPD-------AQLLIVGSGRYE----STLRRLA--TDVSQ-NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE-- 290 (394)
T ss_dssp STT-------CEEEEECCCTTH----HHHHHHT--GGGGG-GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCC--
T ss_pred CCC-------eEEEEEcCchHH----HHHHHHH--hcccC-eEEEcCCCCHHHHHHHHHhCCEEEecCcccccccccc--
Confidence 888 9999999 7654 7777777 47777 89999988 8999999999999999998 7
Q ss_pred CccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH-hcCHH
Q 004092 437 TFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVK-NLMAL 515 (774)
Q Consensus 437 Gfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak-~fs~~ 515 (774)
|+|++++|||+||+|||+|+.++..|++.++ +|++++++|+++++++|.++++| ++.+++|++++++.++ +|+|+
T Consensus 291 ~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~s~~ 366 (394)
T 3okp_A 291 GLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDD---PIRRAAMGAAGRAHVEAEWSWE 366 (394)
T ss_dssp SSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHTBHH
T ss_pred ccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHhCCHH
Confidence 8999999999999999999999999999999 99999999999999999999999 9999999999999995 69999
Q ss_pred HHHHHHHHHHHHHhcCCCCCC
Q 004092 516 ETIEGYAMLLENVLKLPSEVA 536 (774)
Q Consensus 516 ~~a~~y~~L~e~ll~~~~~~~ 536 (774)
.++++|.++|+++........
T Consensus 367 ~~~~~~~~~~~~~~r~~~~~~ 387 (394)
T 3okp_A 367 IMGERLTNILQSEPRKLAAAL 387 (394)
T ss_dssp HHHHHHHHHHHSCCC------
T ss_pred HHHHHHHHHHHHhccCcchhh
Confidence 999999999999865544433
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=331.89 Aligned_cols=364 Identities=15% Similarity=0.155 Sum_probs=264.7
Q ss_pred cccccCCCCCCCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcc-----------
Q 004092 134 HRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQ----------- 202 (774)
Q Consensus 134 ~~~~~r~~~rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~----------- 202 (774)
|.+.+.+--|++++...... ..||++.++..+++.|.++||+|+|++........ ....++.+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~p-~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 82 (394)
T 2jjm_A 5 GSSHHHHHHMKLKIGITCYP-SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-KVYPNIYFHEVTVNQYSVFQYPP 82 (394)
T ss_dssp ----------CCEEEEECCC---CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----CCCTTEEEECCCCC----CCSCC
T ss_pred cccccchhhheeeeehhcCC-CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc-ccCCceEEEeccccccccccccc
Confidence 56666777788887776654 48999999999999999999999999975421110 011122222111
Q ss_pred ----cchhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCC-CCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHh
Q 004092 203 ----TGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPF-KSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNR 277 (774)
Q Consensus 203 ----~~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~-~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~ 277 (774)
....+...++..+||+||+|+.........+..... .++|+|+++|+..... . ... .......+..+..
T Consensus 83 ~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-~---~~~--~~~~~~~~~~~~~ 156 (394)
T 2jjm_A 83 YDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV-L---GSD--PSLNNLIRFGIEQ 156 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-T---TTC--TTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-c---CCC--HHHHHHHHHHHhh
Confidence 112345556778999999998765323333332212 2589999999632210 0 000 0011123345667
Q ss_pred ccEEEccCCcchhh-cccC-CCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHH
Q 004092 278 ATVVVFPDYVLPMM-YSAF-DAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHAL 355 (774)
Q Consensus 278 a~~vv~ps~~~~~i-~~~v-~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~l 355 (774)
++.+++.+...... .... ...++.+||+ |+|...+. ......++++++++++.++++++| ++.+. ||++.
T Consensus 157 ad~ii~~s~~~~~~~~~~~~~~~~~~vi~n-gv~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---Kg~~~ 228 (394)
T 2jjm_A 157 SDVVTAVSHSLINETHELVKPNKDIQTVYN-FIDERVYF---KRDMTQLKKEYGISESEKILIHIS-NFRKV---KRVQD 228 (394)
T ss_dssp SSEEEESCHHHHHHHHHHTCCSSCEEECCC-CCCTTTCC---CCCCHHHHHHTTCC---CEEEEEC-CCCGG---GTHHH
T ss_pred CCEEEECCHHHHHHHHHhhCCcccEEEecC-CccHHhcC---CcchHHHHHHcCCCCCCeEEEEee-ccccc---cCHHH
Confidence 88777776663222 1111 2468999994 78874332 223456788899988888999999 88887 99999
Q ss_pred HHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccC
Q 004092 356 ILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLE 434 (774)
Q Consensus 356 LLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E 434 (774)
+++|+..+.++ ++ ++|+|+| |+.. +.++++++++++.+ +|.|+|+.+++..+|+.||++|+||..|
T Consensus 229 li~a~~~l~~~-~~-------~~l~i~G~g~~~----~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~~adv~v~ps~~e 295 (394)
T 2jjm_A 229 VVQAFAKIVTE-VD-------AKLLLVGDGPEF----CTILQLVKNLHIED-RVLFLGKQDNVAELLAMSDLMLLLSEKE 295 (394)
T ss_dssp HHHHHHHHHHS-SC-------CEEEEECCCTTH----HHHHHHHHTTTCGG-GBCCCBSCSCTHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHhh-CC-------CEEEEECCchHH----HHHHHHHHHcCCCC-eEEEeCchhhHHHHHHhCCEEEeccccC
Confidence 99999999876 45 8999999 7754 78889999999988 9999999999999999999999999988
Q ss_pred cCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcC
Q 004092 435 EQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLM 513 (774)
Q Consensus 435 ~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs 513 (774)
|||++++|||+||+|||+|+.+++.|++.++.+|++++++|+++++++|.++++| ++.+++|++++++.+ ++|+
T Consensus 296 --~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~~~~s 370 (394)
T 2jjm_A 296 --SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD---EELHRNMGERARESVYEQFR 370 (394)
T ss_dssp --SCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHSC
T ss_pred --CCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHhCC
Confidence 8999999999999999999999999999999999999999999999999999999 999999999999999 7899
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 004092 514 ALETIEGYAMLLENVLKL 531 (774)
Q Consensus 514 ~~~~a~~y~~L~e~ll~~ 531 (774)
|+.++++|.++|+++++.
T Consensus 371 ~~~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 371 SEKIVSQYETIYYDVLRD 388 (394)
T ss_dssp HHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998764
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=332.76 Aligned_cols=354 Identities=14% Similarity=0.205 Sum_probs=267.3
Q ss_pred CCCCCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh-hh-----hcCccEEEccc-----c----h
Q 004092 141 GYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV-WR-----NIGVPVAILQT-----G----R 205 (774)
Q Consensus 141 ~~rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~-~~-----~~gi~i~~l~~-----~----~ 205 (774)
.++++||+++.+.+..||++.++.++++.|.+.||+|++++......... .. ..+.+...+.. . .
T Consensus 37 ~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (416)
T 2x6q_A 37 KLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNR 116 (416)
T ss_dssp TTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHH
T ss_pred hhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccceeecccccccccHHHHHHHHHHHH
Confidence 35678999999999899999999999999999999999998765431110 00 01111111110 0 1
Q ss_pred hHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccC
Q 004092 206 EKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPD 285 (774)
Q Consensus 206 ~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps 285 (774)
.+...++..+||+||+|++... .+..++ . ..+|+|++.|+...... ..........+..++.+++..
T Consensus 117 ~~~~~l~~~~~Dvv~~~~~~~~-~~~~~~-~--~~~p~v~~~h~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~ 183 (416)
T 2x6q_A 117 ENSKFIDLSSFDYVLVHDPQPA-ALIEFY-E--KKSPWLWRCHIDLSSPN---------REFWEFLRRFVEKYDRYIFHL 183 (416)
T ss_dssp HHHHSSCGGGSSEEEEESSTTG-GGGGGS-C--CCSCEEEECCSCCSSCC---------HHHHHHHHHHHTTSSEEEESS
T ss_pred HHHHHHhhcCCCEEEEeccchh-hHHHHH-H--hcCCEEEEEccccCCcc---------HHHHHHHHHHHHhCCEEEEec
Confidence 1223345569999999997663 222222 2 23899999997432110 001111222344555554332
Q ss_pred CcchhhcccCCCCCEEEeCCCCCCcccccc--cCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHc
Q 004092 286 YVLPMMYSAFDAGNYYVIPGSPAKAWEADT--NMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPL 363 (774)
Q Consensus 286 ~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~--~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L 363 (774)
+. .....+...++.+||+ |+|...+.. .....+..++++++++++.++++++| ++.+. ||++.+++|+..+
T Consensus 184 s~--~~~~~~~~~~~~vi~n-gvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~~l 256 (416)
T 2x6q_A 184 PE--YVQPELDRNKAVIMPP-SIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVS-RFDPW---KGIFDVIEIYRKV 256 (416)
T ss_dssp GG--GSCTTSCTTTEEECCC-CBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEEC-CCCTT---SCHHHHHHHHHHH
T ss_pred hH--HHHhhCCccceEEeCC-CCChhhhcccccChhhHHHHHHHhCCCCCCcEEEEEe-ccccc---cCHHHHHHHHHHH
Confidence 22 1122344478899994 788644332 22223567889999999999999999 88888 9999999999999
Q ss_pred hhhcccCCCCCCCeEEEEEe-CCCC-CchHHHHHHHHHHcCCCCccEEEccCcc-----cHHHHHHHcCEEEEcCccCcC
Q 004092 364 FSEVSVENESNSPIKVMILS-GDST-SNYSVVIEAIAHNLHYPLGVVKHMAAEG-----DVDSVLNTADVVIYGSFLEEQ 436 (774)
Q Consensus 364 ~~~~p~~~~~~~~v~LvIvG-G~~~-e~Y~~~L~~la~~lgL~~~~V~flG~~~-----dl~~~l~aaDI~V~PS~~E~q 436 (774)
.+++|+ ++|+|+| |+.. ..+.+.++++++++++.+ +|.|+|+.. ++..+|++||++|+||..|
T Consensus 257 ~~~~~~-------~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~-~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E-- 326 (416)
T 2x6q_A 257 KEKIPG-------VQLLLVGVMAHDDPEGWIYFEKTLRKIGEDY-DVKVLTNLIGVHAREVNAFQRASDVILQMSIRE-- 326 (416)
T ss_dssp HHHCTT-------CEEEEEECCCTTCHHHHHHHHHHHHHHTTCT-TEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSC--
T ss_pred HHhCCC-------eEEEEEecCcccchhHHHHHHHHHHHhCCCC-cEEEecccCCCCHHHHHHHHHhCCEEEECCCcC--
Confidence 988888 9999999 7653 345577899999999988 899999653 8999999999999999998
Q ss_pred CccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HhcCHH
Q 004092 437 TFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMAL 515 (774)
Q Consensus 437 Gfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~fs~~ 515 (774)
|||++++||||||+|||+|+.+|++|++.++.+|++++ |+++++++|.++++| ++.+++|+++|++.+ ++|+|+
T Consensus 327 ~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~~~fs~~ 401 (416)
T 2x6q_A 327 GFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKH---PEVSKEMGAKAKERVRKNFIIT 401 (416)
T ss_dssp SSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHTBHH
T ss_pred CCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHcCHH
Confidence 89999999999999999999999999999999999998 999999999999999 999999999999999 579999
Q ss_pred HHHHHHHHHHHHHh
Q 004092 516 ETIEGYAMLLENVL 529 (774)
Q Consensus 516 ~~a~~y~~L~e~ll 529 (774)
.++++|.++|++++
T Consensus 402 ~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 402 KHMERYLDILNSLG 415 (416)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=342.47 Aligned_cols=371 Identities=14% Similarity=0.128 Sum_probs=278.9
Q ss_pred CCeEEEEecCC-------------CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcch-hh----hh----hcCccEEEc
Q 004092 144 KPQLALVFPDL-------------LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAH-EV----WR----NIGVPVAIL 201 (774)
Q Consensus 144 k~rialV~~~L-------------~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~-~~----~~----~~gi~i~~l 201 (774)
++||++|.+.. ..||+++++.++++.|.+.||+|+|++....... .. .. ..++++..+
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence 47999999754 4699999999999999999999999997653211 11 11 235665554
Q ss_pred ccc------------------hhHHHHhhh--cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHh--
Q 004092 202 QTG------------------REKASFVNW--LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNY-- 259 (774)
Q Consensus 202 ~~~------------------~~l~~~i~~--~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~-- 259 (774)
+.. ..+..+++. .+||+||+|+... ..+..++.. ..++|+|+++|+...... ...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~-~~~~~~~~~-~~~~p~v~~~H~~~~~~~-~~~~~ 163 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDG-GLAGVLLKN-IKGLPFTFTGHSLGAQKM-EKLNV 163 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHHHHHHHH-HHCCCEEEECSSCHHHHH-HTTCC
T ss_pred cCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcc-hHHHHHHHH-hcCCcEEEEccCcccccc-hhhcc
Confidence 421 123334554 4899999998654 244443332 456899999998432211 000
Q ss_pred -------hhhhhh--HHHHHHHHHHHhccEEEccCCcchh-hcc----c-C----CCCCEEEeCCCCCCcccccccCchh
Q 004092 260 -------ASSGQL--ELLNDWKKVFNRATVVVFPDYVLPM-MYS----A-F----DAGNYYVIPGSPAKAWEADTNMDLY 320 (774)
Q Consensus 260 -------~~~~~~--~li~~~~~~~~~a~~vv~ps~~~~~-i~~----~-v----~~~ki~vIpg~gvd~~~~~~~~~~~ 320 (774)
...... ......+..+..++.+++.+..... +.. + + ...++.+|| +|+|...+.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~-ngvd~~~~~~~~~~~ 242 (499)
T 2r60_A 164 NTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIP-PGVNTRVFDGEYGDK 242 (499)
T ss_dssp CSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECC-CCBCTTTSSSCCCHH
T ss_pred CCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEEC-CCcChhhcCccchhh
Confidence 000000 1111234466778888887766332 211 2 3 557899999 488875444332222
Q ss_pred -hHHHHHHhC-----CCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeC-CCC------
Q 004092 321 -NDTVRVKMG-----FKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSG-DST------ 387 (774)
Q Consensus 321 -k~~lR~~lg-----l~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG-~~~------ 387 (774)
+..+|+++| ++++.++++++| ++.+. ||++.+++|+..+.+++|+ .++++|+|+ +..
T Consensus 243 ~~~~~r~~~~~~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~~l~~~~~~------~~~l~i~G~~~~~~~~y~~ 312 (499)
T 2r60_A 243 IKAKITKYLERDLGSERMELPAIIASS-RLDQK---KNHYGLVEAYVQNKELQDK------ANLVLTLRGIENPFEDYSR 312 (499)
T ss_dssp HHHHHHHHHHHHSCGGGTTSCEEEECS-CCCGG---GCHHHHHHHHHTCHHHHHH------CEEEEEESSCSBTTTBCTT
T ss_pred hHHHHHHHhcccccccCCCCcEEEEee-cCccc---cCHHHHHHHHHHHHHhCCC------ceEEEEECCCCCccccccc
Confidence 467888888 788888999999 88888 9999999999999887665 258999994 211
Q ss_pred -----CchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHc----CEEEEcCccCcCCccHHHHHHHHcCCCEEEcC
Q 004092 388 -----SNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTA----DVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456 (774)
Q Consensus 388 -----e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aa----DI~V~PS~~E~qGfp~~llEAMA~G~PVIatd 456 (774)
.+|.+.++++++++++.+ +|.|+|++ +++..+|++| |++|+||..| |||++++||||||+|||+|+
T Consensus 313 l~~~~~~y~~~l~~~~~~~~l~~-~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~E--g~~~~~lEAma~G~PvI~s~ 389 (499)
T 2r60_A 313 AGQEEKEILGKIIELIDNNDCRG-KVSMFPLNSQQELAGCYAYLASKGSVFALTSFYE--PFGLAPVEAMASGLPAVVTR 389 (499)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCBT-TEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCB--CCCSHHHHHHHTTCCEEEES
T ss_pred ccccchHHHHHHHHHHHhcCCCc-eEEECCCCCHHHHHHHHHhcCcCCCEEEECcccC--CCCcHHHHHHHcCCCEEEec
Confidence 123789999999999998 99999987 8999999999 9999999998 89999999999999999999
Q ss_pred CcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHhcCCCC
Q 004092 457 LSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKN-LMALETIEGYAMLLENVLKLPSE 534 (774)
Q Consensus 457 ~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~-fs~~~~a~~y~~L~e~ll~~~~~ 534 (774)
.+|+.|++.++.+|++++++|+++++++|.++++| ++.+++|+++|++.+++ |+|+.++++|.++|++++.....
T Consensus 390 ~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~ 465 (499)
T 2r60_A 390 NGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFES---EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDE 465 (499)
T ss_dssp SBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSC---HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC---
T ss_pred CCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999 99999999999999954 99999999999999999876543
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=330.10 Aligned_cols=360 Identities=14% Similarity=0.097 Sum_probs=262.0
Q ss_pred CeEEEEecCC----CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh---------------------hhcCccEE
Q 004092 145 PQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW---------------------RNIGVPVA 199 (774)
Q Consensus 145 ~rialV~~~L----~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~---------------------~~~gi~i~ 199 (774)
+||++|.+.+ ..||++.++.++++.|.++||+|+|++.......... ...++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence 4789998866 4699999999999999999999999997653211110 01355554
Q ss_pred Eccc----------c-------------------hhHHHHhhh----cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEE
Q 004092 200 ILQT----------G-------------------REKASFVNW----LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWT 246 (774)
Q Consensus 200 ~l~~----------~-------------------~~l~~~i~~----~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~t 246 (774)
.++. + ..+..+++. .+||+||+|++... .+..++..+..++|+|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~-~~~~~~~~~~~~~p~v~t 159 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAG-LAPAYLAARGRPAKSVFT 159 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGT-THHHHHHHTTCSSEEEEE
T ss_pred EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchh-HHHHHHhhccCCCCEEEE
Confidence 4321 0 012223332 68999999987653 444444313567999999
Q ss_pred EcCchhhh--h---HHH------hhhh-h--hhHHHHHHHHHHHhccEEEccCCcchhhcc----cC--------CC--C
Q 004092 247 IHEGTLAT--R---ARN------YASS-G--QLELLNDWKKVFNRATVVVFPDYVLPMMYS----AF--------DA--G 298 (774)
Q Consensus 247 iHg~~l~~--~---~~k------~~~~-~--~~~li~~~~~~~~~a~~vv~ps~~~~~i~~----~v--------~~--~ 298 (774)
+|+..... . +.. .... . ........+..+..++.+++.+........ +. .. .
T Consensus 160 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (485)
T 2qzs_A 160 VHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREG 239 (485)
T ss_dssp ESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTT
T ss_pred ecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCC
Confidence 99842110 0 000 0000 0 000011233455677877777655322211 11 12 6
Q ss_pred CEEEeCCCCCCcccccccCch----------------hhHHHHHHhCCCC--CCEEEEEEecccccccccccHHHHHHHH
Q 004092 299 NYYVIPGSPAKAWEADTNMDL----------------YNDTVRVKMGFKP--DDLVIAIVGTQFMYRGLWLEHALILRAL 360 (774)
Q Consensus 299 ki~vIpg~gvd~~~~~~~~~~----------------~k~~lR~~lgl~~--~~~vIl~vGsrl~~~KgiKg~~lLLeA~ 360 (774)
++.+||+ |+|...+.+.... .+..+++++++++ +.++++++| ++.+. ||++.+++|+
T Consensus 240 ~~~vi~n-gvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~ 314 (485)
T 2qzs_A 240 RLSGVLN-GVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVS-RLTSQ---KGLDLVLEAL 314 (485)
T ss_dssp CEEECCC-CCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEE-EESGG---GCHHHHHHHH
T ss_pred ceEEEec-CCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEec-cCccc---cCHHHHHHHH
Confidence 8999994 8887544332211 2467888999986 778999999 88888 9999999999
Q ss_pred HHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEE-EccCcc-cHHHHHHHcCEEEEcCccCcCC
Q 004092 361 LPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVK-HMAAEG-DVDSVLNTADVVIYGSFLEEQT 437 (774)
Q Consensus 361 ~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~-flG~~~-dl~~~l~aaDI~V~PS~~E~qG 437 (774)
+.+.+. + ++|+|+| |+. .+.+.+++++++++ + +|. +.|+.. ++..+|++||++|+||..| |
T Consensus 315 ~~l~~~--~-------~~l~ivG~g~~--~~~~~l~~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~v~pS~~E--~ 378 (485)
T 2qzs_A 315 PGLLEQ--G-------GQLALLGAGDP--VLQEGFLAAAAEYP--G-QVGVQIGYHEAFSHRIMGGADVILVPSRFE--P 378 (485)
T ss_dssp HHHHHT--T-------CEEEEEEEECH--HHHHHHHHHHHHST--T-TEEEEESCCHHHHHHHHHHCSEEEECCSCC--S
T ss_pred HHHhhC--C-------cEEEEEeCCch--HHHHHHHHHHHhCC--C-cEEEeCCCCHHHHHHHHHhCCEEEECCccC--C
Confidence 998763 5 8999999 752 35688999999775 4 685 899874 4589999999999999998 8
Q ss_pred ccHHHHHHHHcCCCEEEcCCcccccccccC---------ccEEEEcCCCHHHHHHHHHHHH---HcCCCcHHHHHHHHHH
Q 004092 438 FPEILVKALCFRKPIIAPDLSNIRKYVDDR---------VNGYLFPKENIKALTHIILQVI---TNGKISPFARNIASIG 505 (774)
Q Consensus 438 fp~~llEAMA~G~PVIatd~ggi~EiV~dg---------~~G~Lv~~~d~e~La~aI~~Ll---~d~~~~~~r~~m~~~a 505 (774)
||++++||||||+|||+|+.+|+.|++.++ .+|++++++|+++|+++|.+++ +| ++.+++|++++
T Consensus 379 ~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~---~~~~~~~~~~~ 455 (485)
T 2qzs_A 379 CGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSR---PSLWRFVQRQA 455 (485)
T ss_dssp SCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTS---HHHHHHHHHHH
T ss_pred CcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCC---HHHHHHHHHHH
Confidence 999999999999999999999999999998 8999999999999999999999 68 88899999998
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHhcC
Q 004092 506 RRSVKNLMALETIEGYAMLLENVLKL 531 (774)
Q Consensus 506 r~~ak~fs~~~~a~~y~~L~e~ll~~ 531 (774)
++ ++|+|+.++++|.++|++++..
T Consensus 456 ~~--~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 456 MA--MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp HH--CCCCHHHHHHHHHHHHHHHC--
T ss_pred Hh--hcCCHHHHHHHHHHHHHHhhhh
Confidence 74 7899999999999999998543
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=328.89 Aligned_cols=362 Identities=14% Similarity=0.092 Sum_probs=263.3
Q ss_pred CeEEEEecCC----CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh----------------------hhcCccE
Q 004092 145 PQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW----------------------RNIGVPV 198 (774)
Q Consensus 145 ~rialV~~~L----~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~----------------------~~~gi~i 198 (774)
+||++|.+.+ ..||++.++.++++.|.++||+|+|++.......... ...++++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence 4789998866 3699999999999999999999999997653211110 0235555
Q ss_pred EEcccc-----------------------------hhHHHHh----hhcCccEEEEcCCchhHHHHHHHhCC-CCCCCEE
Q 004092 199 AILQTG-----------------------------REKASFV----NWLNYDGILVNSLEAKVVISNIMQEP-FKSLPLV 244 (774)
Q Consensus 199 ~~l~~~-----------------------------~~l~~~i----~~~~~DIIhvhs~~~~~~l~~Ll~~~-~~~ipvI 244 (774)
..++.. ..+..++ +..+||+||+|++... .+..++... ..++|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~-~~~~~~~~~~~~~~p~v 159 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAA-MTPVYMRYAETPEIPSL 159 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHT-THHHHHHHSSSCCCCEE
T ss_pred EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchh-HHHHHHhhcccCCCCEE
Confidence 543210 0011223 3568999999986542 344443321 3679999
Q ss_pred EEEcCchhhhh-----HH------Hhhhh-h--hhHHHHHHHHHHHhccEEEccCCcchhhc-c---c--------CCCC
Q 004092 245 WTIHEGTLATR-----AR------NYASS-G--QLELLNDWKKVFNRATVVVFPDYVLPMMY-S---A--------FDAG 298 (774)
Q Consensus 245 ~tiHg~~l~~~-----~~------k~~~~-~--~~~li~~~~~~~~~a~~vv~ps~~~~~i~-~---~--------v~~~ 298 (774)
+|+|+...... +. ..... . ........+..+..++.+++.+....... . + ....
T Consensus 160 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (485)
T 1rzu_A 160 LTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAH 239 (485)
T ss_dssp EEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGG
T ss_pred EEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcC
Confidence 99998421100 00 00000 0 00001123445667887777766632221 1 1 2457
Q ss_pred CEEEeCCCCCCcccccccCch----------------hhHHHHHHhCCCCC-CEEEEEEecccccccccccHHHHHHHHH
Q 004092 299 NYYVIPGSPAKAWEADTNMDL----------------YNDTVRVKMGFKPD-DLVIAIVGTQFMYRGLWLEHALILRALL 361 (774)
Q Consensus 299 ki~vIpg~gvd~~~~~~~~~~----------------~k~~lR~~lgl~~~-~~vIl~vGsrl~~~KgiKg~~lLLeA~~ 361 (774)
++.+||+ |+|...+.+.... .+..+++++|++++ +++++++| ++.+. ||++.+++|+.
T Consensus 240 ~~~vi~n-gvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~ 314 (485)
T 1rzu_A 240 VLHGIVN-GIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVIS-RLTWQ---KGIDLMAEAVD 314 (485)
T ss_dssp GEEECCC-CBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEES-CBSTT---TTHHHHHTTHH
T ss_pred CceEEcC-CCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEc-cCccc---cCHHHHHHHHH
Confidence 8999994 8887544332211 14678889999875 67999999 88888 99999999999
Q ss_pred HchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEE-EccCccc-HHHHHHHcCEEEEcCccCcCCc
Q 004092 362 PLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVK-HMAAEGD-VDSVLNTADVVIYGSFLEEQTF 438 (774)
Q Consensus 362 ~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~-flG~~~d-l~~~l~aaDI~V~PS~~E~qGf 438 (774)
.+.+. + ++|+|+| |+. .|.+.+++++++++ + +|. +.|+..+ +..+|++||++|+||..| ||
T Consensus 315 ~l~~~--~-------~~l~ivG~g~~--~~~~~l~~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~v~pS~~E--~~ 378 (485)
T 1rzu_A 315 EIVSL--G-------GRLVVLGAGDV--ALEGALLAAASRHH--G-RVGVAIGYNEPLSHLMQAGCDAIIIPSRFE--PC 378 (485)
T ss_dssp HHHHT--T-------CEEEEEECBCH--HHHHHHHHHHHHTT--T-TEEEEESCCHHHHHHHHHHCSEEEECCSCC--SS
T ss_pred HHHhc--C-------ceEEEEeCCch--HHHHHHHHHHHhCC--C-cEEEecCCCHHHHHHHHhcCCEEEECcccC--CC
Confidence 99763 5 9999999 642 35688999999775 4 687 8898744 589999999999999998 89
Q ss_pred cHHHHHHHHcCCCEEEcCCcccccccccC---------ccEEEEcCCCHHHHHHHHHHHH---HcCCCcHHHHHHHHHHH
Q 004092 439 PEILVKALCFRKPIIAPDLSNIRKYVDDR---------VNGYLFPKENIKALTHIILQVI---TNGKISPFARNIASIGR 506 (774)
Q Consensus 439 p~~llEAMA~G~PVIatd~ggi~EiV~dg---------~~G~Lv~~~d~e~La~aI~~Ll---~d~~~~~~r~~m~~~ar 506 (774)
|++++||||||+|||+|+.+|++|++.++ .+|++++++|+++|+++|.+++ +| ++.+++|+++++
T Consensus 379 ~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~---~~~~~~~~~~~~ 455 (485)
T 1rzu_A 379 GLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD---PKLWTQMQKLGM 455 (485)
T ss_dssp CSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC---HHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCC---HHHHHHHHHHHH
Confidence 99999999999999999999999999998 8999999999999999999999 78 889999999987
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHhcCCC
Q 004092 507 RSVKNLMALETIEGYAMLLENVLKLPS 533 (774)
Q Consensus 507 ~~ak~fs~~~~a~~y~~L~e~ll~~~~ 533 (774)
+ ++|+|+.++++|.++|+++++.+.
T Consensus 456 ~--~~fs~~~~~~~~~~~y~~~~~~~~ 480 (485)
T 1rzu_A 456 K--SDVSWEKSAGLYAALYSQLISKGH 480 (485)
T ss_dssp T--CCCBHHHHHHHHHHHHHHHTC---
T ss_pred H--HhCChHHHHHHHHHHHHHhhCCCC
Confidence 5 789999999999999999876543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-35 Score=317.75 Aligned_cols=350 Identities=14% Similarity=0.099 Sum_probs=260.8
Q ss_pred CeEEEEecC-CCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc------------hhHHHHh
Q 004092 145 PQLALVFPD-LLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG------------REKASFV 211 (774)
Q Consensus 145 ~rialV~~~-L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~------------~~l~~~i 211 (774)
+||+++.+. ...||.++++.++++.|.++||+|+|++....... ..++++..++.. ..+...+
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~i 76 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC----PKAFELIQVPVKSHTNHGRNAEYYAWVQNHL 76 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC----CTTCEEEECCCCCSSHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC----CCCcEEEEEccCcccchhhHHHHHHHHHHHH
Confidence 468888876 35699999999999999999999999997632211 124455544432 1234456
Q ss_pred hhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHH--hccEEEccCCcch
Q 004092 212 NWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFN--RATVVVFPDYVLP 289 (774)
Q Consensus 212 ~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~--~a~~vv~ps~~~~ 289 (774)
+..+||+||+|+.... ... ........+|.+++.|+... ..... ........+..+. .++.+++.+....
T Consensus 77 ~~~~~Dvv~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 148 (374)
T 2iw1_A 77 KEHPADRVVGFNKMPG-LDV-YFAADVCYAEKVAQEKGFLY-----RLTSR-YRHYAAFERATFEQGKSTKLMMLTDKQI 148 (374)
T ss_dssp HHSCCSEEEESSCCTT-CSE-EECCSCCHHHHHHHHCCHHH-----HTSHH-HHHHHHHHHHHHSTTCCCEEEESCHHHH
T ss_pred hccCCCEEEEecCCCC-cee-eeccccccceeeeecccchh-----hhcHH-HHHHHHHHHHHhhccCCcEEEEcCHHHH
Confidence 6789999999876442 100 01111112233333342110 00000 0000111112222 4666666665522
Q ss_pred h-h--cccCCCCCEEEeCCCCCCcccccccCchh-hHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchh
Q 004092 290 M-M--YSAFDAGNYYVIPGSPAKAWEADTNMDLY-NDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFS 365 (774)
Q Consensus 290 ~-i--~~~v~~~ki~vIpg~gvd~~~~~~~~~~~-k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~ 365 (774)
. . ..+++..++.+||+ |+|...+....... +..++++++++++.++++++| ++.+. ||++.+++|+..+.+
T Consensus 149 ~~~~~~~~~~~~~~~vi~n-gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---K~~~~li~a~~~l~~ 223 (374)
T 2iw1_A 149 ADFQKHYQTEPERFQILPP-GIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVG-SDFGR---KGVDRSIEALASLPE 223 (374)
T ss_dssp HHHHHHHCCCGGGEEECCC-CCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEEC-SCTTT---TTHHHHHHHHHTSCH
T ss_pred HHHHHHhCCChhheEEecC-CcCHHhcCcccchhHHHHHHHHhCCCCCCeEEEEec-cchhh---cCHHHHHHHHHHhHh
Confidence 2 2 12455678999994 88875544433322 567899999999999999999 88887 999999999999987
Q ss_pred h-cccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHH
Q 004092 366 E-VSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILV 443 (774)
Q Consensus 366 ~-~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~ll 443 (774)
+ .++ ++|+|+| |+ . +.++++++++++.+ +|.|+|+.+++..+|+.||++|+||..| |||++++
T Consensus 224 ~~~~~-------~~l~i~G~g~-~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~ps~~e--~~~~~~~ 288 (374)
T 2iw1_A 224 SLRHN-------TLLFVVGQDK-P----RKFEALAEKLGVRS-NVHFFSGRNDVSELMAAADLLLHPAYQE--AAGIVLL 288 (374)
T ss_dssp HHHHT-------EEEEEESSSC-C----HHHHHHHHHHTCGG-GEEEESCCSCHHHHHHHCSEEEECCSCC--SSCHHHH
T ss_pred ccCCc-------eEEEEEcCCC-H----HHHHHHHHHcCCCC-cEEECCCcccHHHHHHhcCEEEeccccC--CcccHHH
Confidence 7 577 9999999 65 3 67889999999988 9999999999999999999999999998 8999999
Q ss_pred HHHHcCCCEEEcCCcccccccccCccEEEEc-CCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 004092 444 KALCFRKPIIAPDLSNIRKYVDDRVNGYLFP-KENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYA 522 (774)
Q Consensus 444 EAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~-~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~ 522 (774)
|||+||+|||+|+.+|..|++.++.+|++++ ++|+++++++|.++++| ++.+++|++++++.+++++|..+++.+.
T Consensus 289 Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T 2iw1_A 289 EAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ---SPLRMAWAENARHYADTQDLYSLPEKAA 365 (374)
T ss_dssp HHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHSCCSCHHHHHH
T ss_pred HHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHHcC---hHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 9999999999999999999999999999998 88999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHh
Q 004092 523 MLLENVL 529 (774)
Q Consensus 523 ~L~e~ll 529 (774)
++++..+
T Consensus 366 ~~l~~~l 372 (374)
T 2iw1_A 366 DIITGGL 372 (374)
T ss_dssp HHHHCC-
T ss_pred HHHHHhh
Confidence 9998754
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=311.40 Aligned_cols=350 Identities=15% Similarity=0.181 Sum_probs=258.2
Q ss_pred CCCCCeEEEEecCC--CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcc-hhhhhhcCccEEEcc---------c----c
Q 004092 141 GYRKPQLALVFPDL--LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRA-HEVWRNIGVPVAILQ---------T----G 204 (774)
Q Consensus 141 ~~rk~rialV~~~L--~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~-~~~~~~~gi~i~~l~---------~----~ 204 (774)
+.+++||+++.+.+ ..||.+.++..+++.|.+.||+|++++...... ...+...+..+..++ . .
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATH 96 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHH
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHH
Confidence 44568999999865 349999999999999999999999999866432 011100100111111 1 1
Q ss_pred hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEcc
Q 004092 205 REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFP 284 (774)
Q Consensus 205 ~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~p 284 (774)
..+..+++..+||+||+|+...... ..++.. ..++|+|+++|+............. ..+..+..++.+++.
T Consensus 97 ~~l~~~l~~~~~Dii~~~~~~~~~~-~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~-------~~~~~~~~~d~ii~~ 167 (406)
T 2gek_A 97 RKVKKWIAEGDFDVLHIHEPNAPSL-SMLALQ-AAEGPIVATFHTSTTKSLTLSVFQG-------ILRPYHEKIIGRIAV 167 (406)
T ss_dssp HHHHHHHHHHCCSEEEEECCCSSSH-HHHHHH-HEESSEEEEECCCCCSHHHHHHHHS-------TTHHHHTTCSEEEES
T ss_pred HHHHHHHHhcCCCEEEECCccchHH-HHHHHH-hcCCCEEEEEcCcchhhhhHHHHHH-------HHHHHHhhCCEEEEC
Confidence 3455667778999999998776423 333322 3468999999984322111111111 112445677777777
Q ss_pred CCcch-hhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEeccc-ccccccccHHHHHHHHHH
Q 004092 285 DYVLP-MMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQF-MYRGLWLEHALILRALLP 362 (774)
Q Consensus 285 s~~~~-~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl-~~~KgiKg~~lLLeA~~~ 362 (774)
+.... .....+...++ +|| +|+|...+..... ..+++.+.++++++| ++ .+. ||++.+++|+..
T Consensus 168 s~~~~~~~~~~~~~~~~-vi~-~~v~~~~~~~~~~--------~~~~~~~~~~i~~~G-~~~~~~---Kg~~~li~a~~~ 233 (406)
T 2gek_A 168 SDLARRWQMEALGSDAV-EIP-NGVDVASFADAPL--------LDGYPREGRTVLFLG-RYDEPR---KGMAVLLAALPK 233 (406)
T ss_dssp SHHHHHHHHHHHSSCEE-ECC-CCBCHHHHHTCCC--------CTTCSCSSCEEEEES-CTTSGG---GCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCcE-Eec-CCCChhhcCCCch--------hhhccCCCeEEEEEe-eeCccc---cCHHHHHHHHHH
Confidence 65532 22234455678 888 4777643322211 123344567999999 77 777 999999999999
Q ss_pred chhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCc-cCcCCc
Q 004092 363 LFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSF-LEEQTF 438 (774)
Q Consensus 363 L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~-~E~qGf 438 (774)
+.+++|+ ++|+|+| |+. +.++++++++ .+ +|.|+|++ +++..+|+.||++|+||. .| ||
T Consensus 234 l~~~~~~-------~~l~i~G~~~~-----~~l~~~~~~~--~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e--~~ 296 (406)
T 2gek_A 234 LVARFPD-------VEILIVGRGDE-----DELREQAGDL--AG-HLRFLGQVDDATKASAMRSADVYCAPHLGGE--SF 296 (406)
T ss_dssp HHTTSTT-------CEEEEESCSCH-----HHHHHHTGGG--GG-GEEECCSCCHHHHHHHHHHSSEEEECCCSCC--SS
T ss_pred HHHHCCC-------eEEEEEcCCcH-----HHHHHHHHhc--cC-cEEEEecCCHHHHHHHHHHCCEEEecCCCCC--CC
Confidence 9988888 9999999 653 5667777755 55 89999988 567999999999999996 77 89
Q ss_pred cHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHH
Q 004092 439 PEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETI 518 (774)
Q Consensus 439 p~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a 518 (774)
|++++|||+||+|||+++.+++.|++.++.+|++++++|+++++++|.++++| ++.+.+|++++++.+++|+|+.++
T Consensus 297 ~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~s~~~~~ 373 (406)
T 2gek_A 297 GIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILED---DQLRAGYVARASERVHRYDWSVVS 373 (406)
T ss_dssp CHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHGGGGBHHHHH
T ss_pred chHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCC
Q 004092 519 EGYAMLLENVLKLPS 533 (774)
Q Consensus 519 ~~y~~L~e~ll~~~~ 533 (774)
++|.++|+++++...
T Consensus 374 ~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 374 AQIMRVYETVSGAGI 388 (406)
T ss_dssp HHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999986543
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=312.69 Aligned_cols=344 Identities=13% Similarity=0.066 Sum_probs=257.8
Q ss_pred CeEEEEecCC-CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCc-ch---------hhhhhcCccEEE-cccchhHHHHhh
Q 004092 145 PQLALVFPDL-LIDPQQLQMVTIAIALREIGYAIQVYSLEDGR-AH---------EVWRNIGVPVAI-LQTGREKASFVN 212 (774)
Q Consensus 145 ~rialV~~~L-~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~-~~---------~~~~~~gi~i~~-l~~~~~l~~~i~ 212 (774)
+||+++.+.. ..||.++++..+++.|.+. |+|+|++..... .. ....... .... ......+...++
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~ 78 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVR-GLNEQGFYYSGLSEFID 78 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHT-TCCSTTCCHHHHHHHHH
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCcccccccc-ccccccchHHHHHHHHH
Confidence 5788888755 4699999999999999999 999999875421 00 0000000 0000 011223456677
Q ss_pred hcCccEEEEcCCchhHHHHHHHhC--CC-CCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhcc--EEEccCCc
Q 004092 213 WLNYDGILVNSLEAKVVISNIMQE--PF-KSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRAT--VVVFPDYV 287 (774)
Q Consensus 213 ~~~~DIIhvhs~~~~~~l~~Ll~~--~~-~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~--~vv~ps~~ 287 (774)
..+||+||+|++.. .+..++.. .. ...+++...|....... +. .+..+..++ .+++.+..
T Consensus 79 ~~~~Div~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------~~~~~~~~~~~~ii~~S~~ 143 (413)
T 3oy2_A 79 VHKPDIVMIYNDPI--VIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--EN-----------LWWIFSHPKVVGVMAMSKC 143 (413)
T ss_dssp HHCCSEEEEEECHH--HHHHHHHHGGGCCSCCEEEEEECCCSBSCC--GG-----------GGGGGGCTTEEEEEESSTH
T ss_pred hcCCCEEEEcchHH--HHHHHHHHhccCCCCCceeeeccccchhhH--HH-----------HHHHHhccCCceEEEcCHH
Confidence 88999999996554 33332221 11 12456777775221110 00 112233444 56666555
Q ss_pred chhh--cccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCC--CCEEEEEEecccccccccccHHHHHHHHHHc
Q 004092 288 LPMM--YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKP--DDLVIAIVGTQFMYRGLWLEHALILRALLPL 363 (774)
Q Consensus 288 ~~~i--~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~--~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L 363 (774)
.... ..+. ..++.+|| +|+|...+ ...++++++++ +.++++++| ++.+. ||++.+++|+..+
T Consensus 144 ~~~~~~~~~~-~~~~~vi~-ngvd~~~~--------~~~~~~~~~~~~~~~~~il~vG-r~~~~---Kg~~~li~a~~~l 209 (413)
T 3oy2_A 144 WISDICNYGC-KVPINIVS-HFVDTKTI--------YDARKLVGLSEYNDDVLFLNMN-RNTAR---KRLDIYVLAAARF 209 (413)
T ss_dssp HHHHHHHTTC-CSCEEECC-CCCCCCCC--------TTHHHHTTCGGGTTSEEEECCS-CSSGG---GTHHHHHHHHHHH
T ss_pred HHHHHHHcCC-CCceEEeC-CCCCHHHH--------HHHHHhcCCCcccCceEEEEcC-CCchh---cCcHHHHHHHHHH
Confidence 3222 1222 47899999 48887433 23467788887 889999999 78888 9999999999999
Q ss_pred hhhcccCCCCCCCeEEEEEe-CCCCCc--hHHHHHHHHHHcCCCCcc-------EEEccCc--ccHHHHHHHcCEEEEcC
Q 004092 364 FSEVSVENESNSPIKVMILS-GDSTSN--YSVVIEAIAHNLHYPLGV-------VKHMAAE--GDVDSVLNTADVVIYGS 431 (774)
Q Consensus 364 ~~~~p~~~~~~~~v~LvIvG-G~~~e~--Y~~~L~~la~~lgL~~~~-------V~flG~~--~dl~~~l~aaDI~V~PS 431 (774)
.+++|+ ++|+|+| |+.... +.+.++++++++++.+ + |.+.|++ +++..+|++||++|+||
T Consensus 210 ~~~~~~-------~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~-~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS 281 (413)
T 3oy2_A 210 ISKYPD-------AKVRFLCNSHHESKFDLHSIALRELVASGVDN-VFTHLNKIMINRTVLTDERVDMMYNACDVIVNCS 281 (413)
T ss_dssp HHHCTT-------CCEEEEEECCTTCSCCHHHHHHHHHHHHTCSC-HHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECC
T ss_pred HHhCCC-------cEEEEEeCCcccchhhHHHHHHHHHHHcCccc-ccccccceeeccCcCCHHHHHHHHHhCCEEEeCC
Confidence 998888 9999999 765433 4588999999999998 7 8888986 69999999999999999
Q ss_pred ccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCcc---------------EE--EEcCCCHHHHHHHHHHHHHcCCC
Q 004092 432 FLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVN---------------GY--LFPKENIKALTHIILQVITNGKI 494 (774)
Q Consensus 432 ~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~---------------G~--Lv~~~d~e~La~aI~~Ll~d~~~ 494 (774)
..| |||++++||||||+|||+|+.+|++|++.++.+ |+ +++++|+++|+++| ++++|
T Consensus 282 ~~E--~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~--- 355 (413)
T 3oy2_A 282 SGE--GFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKD--- 355 (413)
T ss_dssp SCC--SSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTS---
T ss_pred CcC--CCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcC---
Confidence 998 899999999999999999999999999999887 99 99999999999999 99999
Q ss_pred cHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHhcCCC
Q 004092 495 SPFARNIASIGRRSV-KNLMALETIEGYAMLLENVLKLPS 533 (774)
Q Consensus 495 ~~~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e~ll~~~~ 533 (774)
++.+++|++++++.+ ++|+|+.++++|.++|+++++.+.
T Consensus 356 ~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 395 (413)
T 3oy2_A 356 EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVES 395 (413)
T ss_dssp HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999 679999999999999999987644
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=330.49 Aligned_cols=366 Identities=7% Similarity=0.006 Sum_probs=262.9
Q ss_pred CCCeEEEEecCCC-----------CChHHHHHHH--------HHHHHHHcCCeEE----EEEcCCCcc-----hhhhh--
Q 004092 143 RKPQLALVFPDLL-----------IDPQQLQMVT--------IAIALREIGYAIQ----VYSLEDGRA-----HEVWR-- 192 (774)
Q Consensus 143 rk~rialV~~~L~-----------~GG~e~~v~~--------Lak~L~~~G~eV~----V~t~~~~~~-----~~~~~-- 192 (774)
|..+|++|.++.. .||...++.+ +++.|.++||+|+ |+|...... ....+
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i 356 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERV 356 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEEC
T ss_pred ceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceee
Confidence 4678899888764 7999999995 6666778999886 888653211 01111
Q ss_pred --hcCccEEEcccch----------------hHHH--------Hhhh--cCccEEEEcCCchhHHHHHHHhCCCCCCCEE
Q 004092 193 --NIGVPVAILQTGR----------------EKAS--------FVNW--LNYDGILVNSLEAKVVISNIMQEPFKSLPLV 244 (774)
Q Consensus 193 --~~gi~i~~l~~~~----------------~l~~--------~i~~--~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI 244 (774)
..++.+..++... .+.. ++.. .+||+||+|...+ ..++.++.+ ..++|+|
T Consensus 357 ~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~s-glva~llar-~~gvP~V 434 (816)
T 3s28_A 357 YDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDG-NLVASLLAH-KLGVTQC 434 (816)
T ss_dssp TTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHH-HHHHHHHHH-HHTCCEE
T ss_pred cCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchH-HHHHHHHHH-HcCCCEE
Confidence 1244444443221 0111 1221 3799999998766 355555543 5679999
Q ss_pred EEEcCchhhh-hHH-----Hhhhhh-hhHHHHHHHHHHHhccEEEccCCcchh-------hccc----------------
Q 004092 245 WTIHEGTLAT-RAR-----NYASSG-QLELLNDWKKVFNRATVVVFPDYVLPM-------MYSA---------------- 294 (774)
Q Consensus 245 ~tiHg~~l~~-~~~-----k~~~~~-~~~li~~~~~~~~~a~~vv~ps~~~~~-------i~~~---------------- 294 (774)
+|.|+..... ... ...... ....+......+..++.++..+..... .|..
T Consensus 435 ~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI 514 (816)
T 3s28_A 435 TIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGI 514 (816)
T ss_dssp EECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESC
T ss_pred EEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhccccc
Confidence 9999732110 000 000000 001111223366778877776544211 1111
Q ss_pred -CCCCCEEEeCCCCCCcccccccCchhh----------------HHHHHHhCC--CCCCEEEEEEecccccccccccHHH
Q 004092 295 -FDAGNYYVIPGSPAKAWEADTNMDLYN----------------DTVRVKMGF--KPDDLVIAIVGTQFMYRGLWLEHAL 355 (774)
Q Consensus 295 -v~~~ki~vIpg~gvd~~~~~~~~~~~k----------------~~lR~~lgl--~~~~~vIl~vGsrl~~~KgiKg~~l 355 (774)
....++.+|| +|+|...|.+.....+ ...++.+|+ ++++++|+++| ++.+. ||++.
T Consensus 515 ~~~~~ki~VIp-nGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vG-Rl~~~---KGid~ 589 (816)
T 3s28_A 515 DVFDPKFNIVS-PGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMA-RLDRV---KNLSG 589 (816)
T ss_dssp CTTCTTEEECC-CCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEEC-CCCTT---TTHHH
T ss_pred ccCCCCEEEEC-CCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEc-cCccc---CCHHH
Confidence 1123899999 4888866554432211 012345566 67788999999 88888 99999
Q ss_pred HHHHHHHchhhcccCCCCCCCeEEEEEe-CCC-------CCchHHHHHHHHHHcCCCCccEEEccCc------ccHHHHH
Q 004092 356 ILRALLPLFSEVSVENESNSPIKVMILS-GDS-------TSNYSVVIEAIAHNLHYPLGVVKHMAAE------GDVDSVL 421 (774)
Q Consensus 356 LLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~-------~e~Y~~~L~~la~~lgL~~~~V~flG~~------~dl~~~l 421 (774)
+++|++.+.+..++ ++|+|+| |+. ...+.+.++++++++++.+ +|.|+|++ +++..+|
T Consensus 590 LIeA~~~L~~~~~~-------v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~-~V~flG~~~~~v~~~eL~~~~ 661 (816)
T 3s28_A 590 LVEWYGKNTRLREL-------ANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNG-QFRWISSQMDRVRNGELYRYI 661 (816)
T ss_dssp HHHHHHHCHHHHHH-------CEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBB-BEEEECCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCC-------eEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCC-cEEEccCccccCCHHHHHHHH
Confidence 99999999988888 9999999 652 1125678999999999988 99999954 5678888
Q ss_pred H-HcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHH----HcCCCcH
Q 004092 422 N-TADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVI----TNGKISP 496 (774)
Q Consensus 422 ~-aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll----~d~~~~~ 496 (774)
+ ++|++|+||..| |||++++||||||+|||+|+.||+.|++.++.+|++++++|+++++++|.+++ .| ++
T Consensus 662 ~~aaDvfV~PS~~E--gfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d---~~ 736 (816)
T 3s28_A 662 CDTKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED---PS 736 (816)
T ss_dssp HHTTCEEEECCSCB--SSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHC---TH
T ss_pred HhcCeEEEECCCcc--CccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccC---HH
Confidence 8 689999999998 89999999999999999999999999999999999999999999999997776 89 99
Q ss_pred HHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHH
Q 004092 497 FARNIASIGRRSV-KNLMALETIEGYAMLLENV 528 (774)
Q Consensus 497 ~r~~m~~~ar~~a-k~fs~~~~a~~y~~L~e~l 528 (774)
.+++|+++|++.+ ++|+|+.++++|.++|+..
T Consensus 737 ~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 737 HWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999999 7899999999999999875
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=296.50 Aligned_cols=307 Identities=13% Similarity=0.047 Sum_probs=234.9
Q ss_pred CCCeEEEEecC--------C------CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccchhHH
Q 004092 143 RKPQLALVFPD--------L------LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKA 208 (774)
Q Consensus 143 rk~rialV~~~--------L------~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~~l~ 208 (774)
+++||+++.+. + ..||.+.++..+++.|.++||+|++++....... ..++.+........+.
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~----~~~~~~~~~~~~~~l~ 77 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG----RPGLTVVPAGEPEEIE 77 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC----STTEEECSCCSHHHHH
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC----CCcceeccCCcHHHHH
Confidence 45899999988 2 4699999999999999999999999998654322 1223333233334567
Q ss_pred HHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcc
Q 004092 209 SFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL 288 (774)
Q Consensus 209 ~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~ 288 (774)
..++..+||+||+|+.... .+. .+..++| |+++|+...... . ++.+++.+...
T Consensus 78 ~~l~~~~~Dvi~~~~~~~~-~~~----~~~~~~p-v~~~h~~~~~~~-------~--------------~d~ii~~S~~~ 130 (342)
T 2iuy_A 78 RWLRTADVDVVHDHSGGVI-GPA----GLPPGTA-FISSHHFTTRPV-------N--------------PVGCTYSSRAQ 130 (342)
T ss_dssp HHHHHCCCSEEEECSSSSS-CST----TCCTTCE-EEEEECSSSBCS-------C--------------CTTEEESCHHH
T ss_pred HHHHhcCCCEEEECCchhh-HHH----HhhcCCC-EEEecCCCCCcc-------c--------------ceEEEEcCHHH
Confidence 7788889999999997653 211 3456789 999997432211 0 33334443332
Q ss_pred hhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcc
Q 004092 289 PMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVS 368 (774)
Q Consensus 289 ~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p 368 (774)
...... ..++.+||+ |+|...+..... . .+++++++++| ++.+. ||++.+++|++.+
T Consensus 131 ~~~~~~--~~~~~vi~n-gvd~~~~~~~~~----------~-~~~~~~i~~vG-~~~~~---Kg~~~li~a~~~~----- 187 (342)
T 2iuy_A 131 RAHCGG--GDDAPVIPI-PVDPARYRSAAD----------Q-VAKEDFLLFMG-RVSPH---KGALEAAAFAHAC----- 187 (342)
T ss_dssp HHHTTC--CTTSCBCCC-CBCGGGSCCSTT----------C-CCCCSCEEEES-CCCGG---GTHHHHHHHHHHH-----
T ss_pred HHHHhc--CCceEEEcC-CCChhhcCcccc----------c-CCCCCEEEEEe-ccccc---cCHHHHHHHHHhc-----
Confidence 222212 467788884 787643332211 1 23445899999 88888 9999999999987
Q ss_pred cCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCc----------cCc
Q 004092 369 VENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSF----------LEE 435 (774)
Q Consensus 369 ~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~----------~E~ 435 (774)
+ ++|+|+| |+.. +.+++++++++ + +|.|+|++ +++.++|+.||++|+||. .|
T Consensus 188 ~-------~~l~i~G~g~~~----~~l~~~~~~~~--~-~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E- 252 (342)
T 2iuy_A 188 G-------RRLVLAGPAWEP----EYFDEITRRYG--S-TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCE- 252 (342)
T ss_dssp T-------CCEEEESCCCCH----HHHHHHHHHHT--T-TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCC-
T ss_pred C-------cEEEEEeCcccH----HHHHHHHHHhC--C-CEEEeccCCHHHHHHHHHhCCEEEECCccccccccccccc-
Confidence 3 8999999 7654 77888888777 4 79999988 466999999999999999 67
Q ss_pred CCccHHHHHHHHcCCCEEEcCCccccccccc--CccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-Hhc
Q 004092 436 QTFPEILVKALCFRKPIIAPDLSNIRKYVDD--RVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNL 512 (774)
Q Consensus 436 qGfp~~llEAMA~G~PVIatd~ggi~EiV~d--g~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k~f 512 (774)
|||++++|||+||+|||+|+.+|+.|++.+ +.+|+++++ |+++++++|.++++ ++++++.+ ++|
T Consensus 253 -~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~-----------~~~~~~~~~~~~ 319 (342)
T 2iuy_A 253 -PGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA-----------SDEVRRAAVRLW 319 (342)
T ss_dssp -CCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC-----------HHHHHHHHHHHH
T ss_pred -CccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH-----------HHHHHHHHHHhc
Confidence 899999999999999999999999999999 899999999 99999999987764 56778888 789
Q ss_pred CHHHHHHHHHHHHHHHhcC
Q 004092 513 MALETIEGYAMLLENVLKL 531 (774)
Q Consensus 513 s~~~~a~~y~~L~e~ll~~ 531 (774)
+|+.++++|.++|+++++.
T Consensus 320 s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 320 GHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp BHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999764
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-32 Score=314.39 Aligned_cols=361 Identities=13% Similarity=0.158 Sum_probs=246.9
Q ss_pred CCCCeEEEEecCC----CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh----------------------hhcC
Q 004092 142 YRKPQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW----------------------RNIG 195 (774)
Q Consensus 142 ~rk~rialV~~~L----~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~----------------------~~~g 195 (774)
-+++||++|.... ..||...++..|.++|+++||+|.|+++..+.....+ ...|
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 86 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRG 86 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETT
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECC
Confidence 4678999997654 4699999999999999999999999986432211000 0112
Q ss_pred ccEEEcccc------------------------h---hHH-------HHhh-------------hcCccEEEEcCCchhH
Q 004092 196 VPVAILQTG------------------------R---EKA-------SFVN-------------WLNYDGILVNSLEAKV 228 (774)
Q Consensus 196 i~i~~l~~~------------------------~---~l~-------~~i~-------------~~~~DIIhvhs~~~~~ 228 (774)
++++.+... . ++. .... +..+||+|+|.+.++
T Consensus 87 v~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~- 165 (536)
T 3vue_A 87 VDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTG- 165 (536)
T ss_dssp EEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGS-
T ss_pred ceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHH-
Confidence 332222100 0 000 0010 135678889988774
Q ss_pred HHHHHHh------CCCCCCCEEEEEcCchhhhh-----HHHhh----------------hhhhhHHHHHHHHHHHhccEE
Q 004092 229 VISNIMQ------EPFKSLPLVWTIHEGTLATR-----ARNYA----------------SSGQLELLNDWKKVFNRATVV 281 (774)
Q Consensus 229 ~l~~Ll~------~~~~~ipvI~tiHg~~l~~~-----~~k~~----------------~~~~~~li~~~~~~~~~a~~v 281 (774)
.+..++. ..+.++|+|+|+|+...+.. ..... .......+...+.....++.+
T Consensus 166 l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v 245 (536)
T 3vue_A 166 PLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRV 245 (536)
T ss_dssp THHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEE
T ss_pred HHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEE
Confidence 4443332 12357899999997211100 00000 000001123445566677777
Q ss_pred EccCCcch-hhc----------ccCCCCCEEEeCCCCCCcccccccCc----------------h-hhHHHHHHhCCC--
Q 004092 282 VFPDYVLP-MMY----------SAFDAGNYYVIPGSPAKAWEADTNMD----------------L-YNDTVRVKMGFK-- 331 (774)
Q Consensus 282 v~ps~~~~-~i~----------~~v~~~ki~vIpg~gvd~~~~~~~~~----------------~-~k~~lR~~lgl~-- 331 (774)
...|.... .+. ......++.+|+ +|+|...+.+... . .+..+++.+|++
T Consensus 246 ~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~-NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d 324 (536)
T 3vue_A 246 LTVSPYYAEELISGIARGCELDNIMRLTGITGIV-NGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVD 324 (536)
T ss_dssp EESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECC-CCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCC
T ss_pred EEcCHHHhhhhhcccccccccccccccCCeEEEE-CCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCC
Confidence 66654421 111 113346899999 4888765543211 1 145567777875
Q ss_pred CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEE
Q 004092 332 PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKH 410 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~f 410 (774)
++.++|+++| |+.++ ||++.+++|+..+.++. .+++|+| |+. .+...++..+. ++.+ +|.+
T Consensus 325 ~~~p~i~~vg-Rl~~~---Kg~~~li~a~~~l~~~~---------~~l~l~G~G~~--~~~~~~~~~~~--~~~~-~v~~ 386 (536)
T 3vue_A 325 RKIPLIAFIG-RLEEQ---KGPDVMAAAIPELMQED---------VQIVLLGTGKK--KFEKLLKSMEE--KYPG-KVRA 386 (536)
T ss_dssp TTSCEEEEEC-CBSGG---GCHHHHHHHHHHHTTSS---------CEEEEECCBCH--HHHHHHHHHHH--HSTT-TEEE
T ss_pred CCCcEEEEEe-ecccc---CChHHHHHHHHHhHhhC---------CeEEEEeccCc--hHHHHHHHHHh--hcCC-ceEE
Confidence 5678999999 89998 99999999999997653 6888899 653 23455666666 4455 6888
Q ss_pred ccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEE----------EEcCCCH
Q 004092 411 MAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGY----------LFPKENI 478 (774)
Q Consensus 411 lG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~----------Lv~~~d~ 478 (774)
.+.. +++..+|+.||++|+||.+| |||++++|||+||+|||+|++||++|+|.|+++|+ ++++.|+
T Consensus 387 ~~~~~~~~~~~~~~~aD~~v~PS~~E--~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~ 464 (536)
T 3vue_A 387 VVKFNAPLAHLIMAGADVLAVPSRFE--PCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDV 464 (536)
T ss_dssp ECSCCHHHHHHHHHHCSEEEECCSCC--SSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHH
T ss_pred EEeccHHHHHHHHHhhheeecccccC--CCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCH
Confidence 7754 67888999999999999998 89999999999999999999999999999999998 6777889
Q ss_pred HHHHHHHHHHHH--cCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 004092 479 KALTHIILQVIT--NGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVL 529 (774)
Q Consensus 479 e~La~aI~~Ll~--d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll 529 (774)
++|+++|.++++ + ++.+++|.++|. .++|||++++++|.++|+++.
T Consensus 465 ~~la~ai~ral~~~~---~~~~~~~~~~am--~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 465 KKVAATLKRAIKVVG---TPAYEEMVRNCM--NQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHHHHHHHHHTT---SHHHHHHHHHHH--HSCCSSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcC---cHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHhh
Confidence 999999999886 5 556677776653 367999999999999999973
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-28 Score=269.62 Aligned_cols=319 Identities=12% Similarity=0.065 Sum_probs=235.2
Q ss_pred CCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc-------------------
Q 004092 144 KPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG------------------- 204 (774)
Q Consensus 144 k~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~------------------- 204 (774)
++||+++.+ ..||.+..+..+++.|.++||+|++++...+.........++++..++..
T Consensus 6 ~mkIl~~~~--~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (364)
T 1f0k_A 6 GKRLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFN 83 (364)
T ss_dssp -CEEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHH
T ss_pred CcEEEEEeC--CCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHH
Confidence 378998874 45799999999999999999999999987643323334446665544321
Q ss_pred --hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEE
Q 004092 205 --REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVV 282 (774)
Q Consensus 205 --~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv 282 (774)
..+...++..+||+||+++.... ....+.. +..++|+|++.|+.... ... +.....++.+.
T Consensus 84 ~~~~l~~~l~~~~pDvv~~~~~~~~-~~~~~~~-~~~~~p~v~~~~~~~~~-~~~--------------~~~~~~~d~v~ 146 (364)
T 1f0k_A 84 AWRQARAIMKAYKPDVVLGMGGYVS-GPGGLAA-WSLGIPVVLHEQNGIAG-LTN--------------KWLAKIATKVM 146 (364)
T ss_dssp HHHHHHHHHHHHCCSEEEECSSTTH-HHHHHHH-HHTTCCEEEEECSSSCC-HHH--------------HHHTTTCSEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCc-hHHHHHH-HHcCCCEEEEecCCCCc-HHH--------------HHHHHhCCEEE
Confidence 12334456679999999987642 3333332 24569999999963211 001 11223455555
Q ss_pred ccCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHH
Q 004092 283 FPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLP 362 (774)
Q Consensus 283 ~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~ 362 (774)
.++... ++ ++.+++ +|++...+.. . ..+.++++++++++++++|+++.+. |+++.+++|+..
T Consensus 147 ~~~~~~------~~--~~~~i~-n~v~~~~~~~---~---~~~~~~~~~~~~~~il~~~g~~~~~---k~~~~li~a~~~ 208 (364)
T 1f0k_A 147 QAFPGA------FP--NAEVVG-NPVRTDVLAL---P---LPQQRLAGREGPVRVLVVGGSQGAR---ILNQTMPQVAAK 208 (364)
T ss_dssp ESSTTS------SS--SCEECC-CCCCHHHHTS---C---CHHHHHTTCCSSEEEEEECTTTCCH---HHHHHHHHHHHH
T ss_pred ecChhh------cC--CceEeC-Cccchhhccc---c---hhhhhcccCCCCcEEEEEcCchHhH---HHHHHHHHHHHH
Confidence 443322 22 566777 4777632221 1 1245677877777777777688887 899999999999
Q ss_pred chhhcccCCCCCCCeE-EEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccH
Q 004092 363 LFSEVSVENESNSPIK-VMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPE 440 (774)
Q Consensus 363 L~~~~p~~~~~~~~v~-LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~ 440 (774)
+.+ + ++ ++++| |+ . +.+++.+++++++ +|.|+|+++++..+|+.||++|+|| | |+
T Consensus 209 l~~---~-------~~~l~i~G~~~-~----~~l~~~~~~~~~~--~v~~~g~~~~~~~~~~~ad~~v~~s-----g-~~ 265 (364)
T 1f0k_A 209 LGD---S-------VTIWHQSGKGS-Q----QSVEQAYAEAGQP--QHKVTEFIDDMAAAYAWADVVVCRS-----G-AL 265 (364)
T ss_dssp HGG---G-------EEEEEECCTTC-H----HHHHHHHHHTTCT--TSEEESCCSCHHHHHHHCSEEEECC-----C-HH
T ss_pred hcC---C-------cEEEEEcCCch-H----HHHHHHHhhcCCC--ceEEecchhhHHHHHHhCCEEEECC-----c-hH
Confidence 865 3 77 55677 54 2 6788888888875 5999999999999999999999998 4 99
Q ss_pred HHHHHHHcCCCEEEcCCcccc--------cccccCccEEEEcCCC--HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Q 004092 441 ILVKALCFRKPIIAPDLSNIR--------KYVDDRVNGYLFPKEN--IKALTHIILQVITNGKISPFARNIASIGRRSVK 510 (774)
Q Consensus 441 ~llEAMA~G~PVIatd~ggi~--------EiV~dg~~G~Lv~~~d--~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak 510 (774)
+++|||+||+|||+++.+|++ +++.++. |++++++| +++++++|.++ | ++.+++|++++++.++
T Consensus 266 ~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~~ 339 (364)
T 1f0k_A 266 TVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTLAGW--S---RETLLTMAERARAASI 339 (364)
T ss_dssp HHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHHHTC--C---HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHHHhc--C---HHHHHHHHHHHHHhhc
Confidence 999999999999999999864 4666665 99999988 99999999999 8 8999999999999888
Q ss_pred hcCHHHHHHHHHHHHHHH
Q 004092 511 NLMALETIEGYAMLLENV 528 (774)
Q Consensus 511 ~fs~~~~a~~y~~L~e~l 528 (774)
+|+|+++++.|.++|++.
T Consensus 340 ~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 340 PDATERVANEVSRVARAL 357 (364)
T ss_dssp TTHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHHHH
Confidence 999999999999999875
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-29 Score=280.99 Aligned_cols=340 Identities=8% Similarity=0.050 Sum_probs=217.1
Q ss_pred CCCCCeEEEEecCCCCC---hHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhc-CccE-----------EEcccch
Q 004092 141 GYRKPQLALVFPDLLID---PQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNI-GVPV-----------AILQTGR 205 (774)
Q Consensus 141 ~~rk~rialV~~~L~~G---G~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~-gi~i-----------~~l~~~~ 205 (774)
..+++||+++++.+.++ |+...+..+++.|.++||+|+|++....+........ +.+. .......
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 122 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPNPKDLQSFKSFKYVMPEEDKDFALQIVPFND 122 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCCHHHHGGGTTSEECCTTCCCCCSEEEEECSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecCCCChHHHHhhhccceeeccCCccccceeeeccc
Confidence 34679999999999875 7777899999999999999999998653211111111 1111 0001100
Q ss_pred hHHHHhhhcCccEEEEcCCchhHHHHHHHh------CCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhcc
Q 004092 206 EKASFVNWLNYDGILVNSLEAKVVISNIMQ------EPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRAT 279 (774)
Q Consensus 206 ~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~------~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~ 279 (774)
.....+...++|+||++++... .....+. ......|.++.+|+..... ....... ...+..+..+.
T Consensus 123 ~~~~~~~~~~~Dvv~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~--~~~~~~~~~~~ 194 (413)
T 2x0d_A 123 RYNRTIPVAKHDIFIATAWWTA-YAAQRIVSWQSDTYGIPPNKILYIIQDFEPGF-----YQWSSQY--VLAESTYKYRG 194 (413)
T ss_dssp CTTCCEEECTTEEEEECSHHHH-HHHHHHHHHHHHHHTCCCCCEEEEECSCGGGG-----SCSSHHH--HHHHHTTSCCS
T ss_pred cccccccCCCCCEEEEehHHHH-HHHHHhhhhhhhhcccccCcEEEEEeechhhc-----CccChHH--HHHHHHhccCC
Confidence 0111122357999999986553 2222220 0123468888888632110 0000001 01122333333
Q ss_pred --EEEccCCcch--hhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHH
Q 004092 280 --VVVFPDYVLP--MMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHAL 355 (774)
Q Consensus 280 --~vv~ps~~~~--~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~l 355 (774)
.++.++.... +...+++..++.++|+ ++|...+... . ...+++..++++|+...+. ||++.
T Consensus 195 ~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~-g~d~~~~~~~----------~-~~~~~~~~il~~gr~~~~~---Kg~~~ 259 (413)
T 2x0d_A 195 PQIAVFNSELLKQYFNNKGYNFTDEYFFQP-KINTTLKNYI----------N-DKRQKEKIILVYGRPSVKR---NAFTL 259 (413)
T ss_dssp CEEEEEESHHHHHHHHHHTCCCSEEEEECC-CCCHHHHTTT----------T-SCCCCCSEEEEEECTTCGG---GCHHH
T ss_pred ceEEEEcCHHHHHHHHHcCCCCCceEEeCC-CcCchhhccc----------c-cccCCCCEEEEEecCchhc---cCHHH
Confidence 2444444422 1122344456778873 6665222110 1 1223455788899445677 99999
Q ss_pred HHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCc
Q 004092 356 ILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSF 432 (774)
Q Consensus 356 LLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~ 432 (774)
+++|++.+.+++|+ ..+++|+|+| |+.. .++++.+ +|.|+|++ +++.++|++||++|+||.
T Consensus 260 li~A~~~l~~~~~~----~~~~~l~ivG~~~~~-----------~~l~~~~-~v~f~G~~~~~~l~~~~~~adv~v~pS~ 323 (413)
T 2x0d_A 260 IVEALKIFVQKYDR----SNEWKIISVGEKHKD-----------IALGKGI-HLNSLGKLTLEDYADLLKRSSIGISLMI 323 (413)
T ss_dssp HHHHHHHHHHHCTT----GGGCEEEEEESCCCC-----------EEEETTE-EEEEEESCCHHHHHHHHHHCCEEECCCS
T ss_pred HHHHHHHHHHhCCC----CCceEEEEEcCCchh-----------hhcCCcC-cEEEcCCCCHHHHHHHHHhCCEEEEecC
Confidence 99999999877652 0028999999 6653 2356766 89999986 899999999999999999
Q ss_pred cCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhc
Q 004092 433 LEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNL 512 (774)
Q Consensus 433 ~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~f 512 (774)
.| +||++++||||||+|||++ .+|..|++.++.+|++++++|+++||++|.++++| ++.+++ ++++.+++|
T Consensus 324 ~E--~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~---~~~~~~---~~~~~~~~~ 394 (413)
T 2x0d_A 324 SP--HPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMS---FNNRDV---DKKESSNMM 394 (413)
T ss_dssp SS--SCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHH---TC----------CCBSCG
T ss_pred CC--CCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcC---HHHHHH---hHHHHHHhC
Confidence 98 8999999999999999995 46778999999999999999999999999999999 877776 566666789
Q ss_pred CHHHHHHHHHHHHHHHh
Q 004092 513 MALETIEGYAMLLENVL 529 (774)
Q Consensus 513 s~~~~a~~y~~L~e~ll 529 (774)
+|+++.++ .++|++++
T Consensus 395 ~W~~~~~~-~~~~~~l~ 410 (413)
T 2x0d_A 395 FYINEFNE-FSFIKEIE 410 (413)
T ss_dssp GGCCCC----TTHHHHH
T ss_pred CHHHHHHH-HHHHHHHH
Confidence 99998766 55555543
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=277.10 Aligned_cols=333 Identities=11% Similarity=0.064 Sum_probs=242.1
Q ss_pred CCCCCeEEEEecCCCCChHHHHHHHHHHH--HHHcCCeEEEEEcCCC---cchhhhhhcCccEEEccc--chhHHHHhhh
Q 004092 141 GYRKPQLALVFPDLLIDPQQLQMVTIAIA--LREIGYAIQVYSLEDG---RAHEVWRNIGVPVAILQT--GREKASFVNW 213 (774)
Q Consensus 141 ~~rk~rialV~~~L~~GG~e~~v~~Lak~--L~~~G~eV~V~t~~~~---~~~~~~~~~gi~i~~l~~--~~~l~~~i~~ 213 (774)
+-+++||+++.+.+..||.+.++..+++. +.+.||+|++++.... .........+ .+..+.. ...+...++.
T Consensus 202 ~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~ 280 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQAS-TLHDVTALGHLATAKHIRH 280 (568)
T ss_dssp SSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTS-EEEECTTCCHHHHHHHHHH
T ss_pred CCCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcC-eEEECCCCCHHHHHHHHHh
Confidence 46678999999999999999999999999 7889999999997532 2222233333 3333321 2346677888
Q ss_pred cCccEEEEcCCchhH-HHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhc
Q 004092 214 LNYDGILVNSLEAKV-VISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMY 292 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~-~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~ 292 (774)
.+||+||.++..... .+..+. . ...|+++++|+.+........ + +..++.++.++.....
T Consensus 281 ~~~Div~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~-----~---------~~~~d~~i~~s~~~~~-- 341 (568)
T 2vsy_A 281 HGIDLLFDLRGWGGGGRPEVFA-L--RPAPVQVNWLAYPGTSGAPWM-----D---------YVLGDAFALPPALEPF-- 341 (568)
T ss_dssp TTCSEEEECSSCTTCSSCHHHH-T--CCSSEEEEESSSSSCCCCTTC-----C---------EEEECTTTSCTTTGGG--
T ss_pred CCCCEEEECCCCCCcchHHHHh-c--CCCceeEeeecCCcccCCCCc-----e---------EEEECCCcCCcccccC--
Confidence 999999986543211 122222 2 236888888863321100000 0 0112222222222111
Q ss_pred ccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCC
Q 004092 293 SAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENE 372 (774)
Q Consensus 293 ~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~ 372 (774)
+ .+++.+||+ ...... ..........|+++|++++. +++++| ++.+ ||++.+++|+..+.++.|+
T Consensus 342 --~-~~~i~~ipn-~~~~~~--~~~~~~~~~~r~~~~~~~~~-~v~~~g-~~~~----K~~~~li~a~~~l~~~~~~--- 406 (568)
T 2vsy_A 342 --Y-SEHVLRLQG-AFQPSD--TSRVVAEPPSRTQCGLPEQG-VVLCCF-NNSY----KLNPQSMARMLAVLREVPD--- 406 (568)
T ss_dssp --C-SSEEEECSS-CSCCCC--TTCCCCCCCCTGGGTCCTTS-CEEEEC-CCGG----GCCHHHHHHHHHHHHHCTT---
T ss_pred --C-cceeEcCCC-cCCCCC--CCCCCCCCCCccccCCCCCC-EEEEeC-Cccc----cCCHHHHHHHHHHHHhCCC---
Confidence 1 267888885 222210 00000122346788888776 455888 8877 8888899999999988888
Q ss_pred CCCCeEEEEEeCCCCCchHHHHHHHHHHcCCC-CccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcC
Q 004092 373 SNSPIKVMILSGDSTSNYSVVIEAIAHNLHYP-LGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFR 449 (774)
Q Consensus 373 ~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~-~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G 449 (774)
++|+|+|+. ..+.+.+++.++++|+. + +|+|+|++ +++..+|+.||++|+||.+ |||++++|||+||
T Consensus 407 ----~~l~i~G~~--g~~~~~l~~~~~~~~l~~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~~---~~g~~~lEAma~G 476 (568)
T 2vsy_A 407 ----SVLWLLSGP--GEADARLRAFAHAQGVDAQ-RLVFMPKLPHPQYLARYRHADLFLDTHPY---NAHTTASDALWTG 476 (568)
T ss_dssp ----CEEEEECCS--TTHHHHHHHHHHHTTCCGG-GEEEECCCCHHHHHHHGGGCSEEECCSSS---CCSHHHHHHHHTT
T ss_pred ----cEEEEecCC--HHHHHHHHHHHHHcCCChh-HEEeeCCCCHHHHHHHHhcCCEEeeCCCC---CCcHHHHHHHhCC
Confidence 999999931 12458899999999998 7 99999988 5899999999999999976 5999999999999
Q ss_pred CCEEE-------cCCc-------ccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH---Hhc
Q 004092 450 KPIIA-------PDLS-------NIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV---KNL 512 (774)
Q Consensus 450 ~PVIa-------td~g-------gi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a---k~f 512 (774)
+|||+ |+.+ |++|+|.+ |+++++++|.++++| ++.+++|++++++.+ +.|
T Consensus 477 ~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~----------~~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 477 CPVLTTPGETFAARVAGSLNHHLGLDEMNVA----------DDAAFVAKAVALASD---PAALTALHARVDVLRRASGVF 543 (568)
T ss_dssp CCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS----------SHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHSSTT
T ss_pred CCEEeccCCCchHHHHHHHHHHCCChhhhcC----------CHHHHHHHHHHHhcC---HHHHHHHHHHHHHhhhcCCCC
Confidence 99999 9999 99998865 899999999999999 999999999999998 579
Q ss_pred CHHHHHHHHHHHHHHHhcC
Q 004092 513 MALETIEGYAMLLENVLKL 531 (774)
Q Consensus 513 s~~~~a~~y~~L~e~ll~~ 531 (774)
+|+.++++|.++|+++++.
T Consensus 544 ~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 544 HMDGFADDFGALLQALARR 562 (568)
T ss_dssp CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=248.84 Aligned_cols=330 Identities=14% Similarity=0.110 Sum_probs=209.7
Q ss_pred CCCCCeEEEEecC-CCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcch---------------hhhhhcCccEEEcccc
Q 004092 141 GYRKPQLALVFPD-LLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAH---------------EVWRNIGVPVAILQTG 204 (774)
Q Consensus 141 ~~rk~rialV~~~-L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~---------------~~~~~~gi~i~~l~~~ 204 (774)
+.+++||+++... .. ++.......+++.|.++| +|+|++....... ......++.+......
T Consensus 11 ~~~~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 88 (406)
T 2hy7_A 11 GIRRPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLWRTT 88 (406)
T ss_dssp --CCSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECSCBTTHHHHTCTTGGGGGGTTSEEEETTEEEEECCBS
T ss_pred CCCCceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEecccHHHHhhccchhhhhccCccceecCCeEEEeeccc
Confidence 4457899999886 43 222223455788888999 9999965321100 0001124444322110
Q ss_pred -----------hhHHH------------Hhhh--cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHh
Q 004092 205 -----------REKAS------------FVNW--LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNY 259 (774)
Q Consensus 205 -----------~~l~~------------~i~~--~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~ 259 (774)
..+.. .+.. .++|+||.+..... .+..+.. ..++|++++.|+.......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~DvIh~~~~~~~-~~~~~~~--~~~~p~v~~~h~~~~~~~~--- 162 (406)
T 2hy7_A 89 VHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFESGIAV-AFIELAK--RVNPAAKLVYRASDGLSTI--- 162 (406)
T ss_dssp SCCCCCCCGGGHHHHHHHHHHHHHCCCHHHHHHHHHCSEEEEESSGGG-GGHHHHH--HHCTTSEEEEEESSCHHHH---
T ss_pred cCCccccchhhhccchhHHHHHHHhHHHHHHHHhcCCCEEEECCchHH-HHHHHHH--HhCCCEEEEEeccchhhcc---
Confidence 00000 0111 27999995544332 2112221 2358999999974331101
Q ss_pred hhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEE
Q 004092 260 ASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAI 339 (774)
Q Consensus 260 ~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~ 339 (774)
.. ........+..+..++.++..+........... ++.+|| +|+|...+..... ...++.+++++
T Consensus 163 ~~--~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~--~i~vip-ngvd~~~f~~~~~----------~~~~~~~~i~~ 227 (406)
T 2hy7_A 163 NV--ASYIEREFDRVAPTLDVIALVSPAMAAEVVSRD--NVFHVG-HGVDHNLDQLGDP----------SPYAEGIHAVA 227 (406)
T ss_dssp TC--CHHHHHHHHHHGGGCSEEEESCGGGGGGCSCST--TEEECC-CCBCTTHHHHHCS----------CSCCSSEEEEE
T ss_pred cc--cHHHHHHHHHHHHhCCEEEEcCHHHHHHHHhcC--CEEEEc-CCcChHhcCcccc----------cccCCCcEEEE
Confidence 00 011122334466788888877766443332222 899999 4888743321111 01123379999
Q ss_pred EecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--cc
Q 004092 340 VGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GD 416 (774)
Q Consensus 340 vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~d 416 (774)
+| ++.+. ||+ +++ +.+..|+ ++|+|+| |+ ++++++.+ +|.|+|++ ++
T Consensus 228 vG-rl~~~---Kg~---~~~---l~~~~~~-------~~l~ivG~g~------------~~~~~l~~-~V~f~G~~~~~~ 277 (406)
T 2hy7_A 228 VG-SMLFD---PEF---FVV---ASKAFPQ-------VTFHVIGSGM------------GRHPGYGD-NVIVYGEMKHAQ 277 (406)
T ss_dssp EC-CTTBC---HHH---HHH---HHHHCTT-------EEEEEESCSS------------CCCTTCCT-TEEEECCCCHHH
T ss_pred Ee-ccccc---cCH---HHH---HHHhCCC-------eEEEEEeCch------------HHhcCCCC-CEEEcCCCCHHH
Confidence 99 88888 666 333 3445667 9999999 76 34457777 89999987 68
Q ss_pred HHHHHHHcCEEEEcCccCcCCccHHHHHHH-------HcCCCEEEcCCcccccccccCccEEE-EcCCCHHHHHHHHHHH
Q 004092 417 VDSVLNTADVVIYGSFLEEQTFPEILVKAL-------CFRKPIIAPDLSNIRKYVDDRVNGYL-FPKENIKALTHIILQV 488 (774)
Q Consensus 417 l~~~l~aaDI~V~PS~~E~qGfp~~llEAM-------A~G~PVIatd~ggi~EiV~dg~~G~L-v~~~d~e~La~aI~~L 488 (774)
+..+|++||++|+||..| |||++++||| |||+|||+|+. +.++.+|++ ++++|+++|+++|.++
T Consensus 278 l~~~~~~adv~v~ps~~E--~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~l 349 (406)
T 2hy7_A 278 TIGYIKHARFGIAPYASE--QVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQA 349 (406)
T ss_dssp HHHHHHTCSEEECCBSCS--CCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCEEEECCCcc--cCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCHHHHHHHHHHH
Confidence 999999999999999998 8999999999 99999999987 677889999 9999999999999999
Q ss_pred HHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHHHhcCCCCCCCCCcccccCc
Q 004092 489 ITNGKISPFARNIASIGRRSVKNLMALETIEGYAML--LENVLKLPSEVAFPKSIKELSP 546 (774)
Q Consensus 489 l~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L--~e~ll~~~~~~~~~~~~~~~~~ 546 (774)
++| ++ +..+++|+|+.+++++.++ |+++... ..+|.+.|++..
T Consensus 350 l~~---~~---------~~~~~~~sw~~~a~~~~~~~~y~~~~~~---~~~~~~~~~~~~ 394 (406)
T 2hy7_A 350 LEA---PR---------VRYRQCLNWSDTTDRVLDPRAYPETRLY---PHPPTAAPQLSS 394 (406)
T ss_dssp HHC---CC---------CCCSCCCBHHHHHHHHHCGGGSGGGBSS---CCC---------
T ss_pred HhC---cc---------hhhhhcCCHHHHHHHHHHhhcccccCcC---CCCCCccccccc
Confidence 999 66 1234679999999999999 8886543 233556666654
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-26 Score=249.47 Aligned_cols=346 Identities=12% Similarity=0.064 Sum_probs=226.7
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHcCC-eEEEEEcCCCc--chhhhhhcCccE-EEccc--------------chh
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREIGY-AIQVYSLEDGR--AHEVWRNIGVPV-AILQT--------------GRE 206 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~G~-eV~V~t~~~~~--~~~~~~~~gi~i-~~l~~--------------~~~ 206 (774)
+||+++.+.. +....+..++++|.++|+ ++.|+...... ........++.. ..+.. ...
T Consensus 1 mkIl~v~~~~---~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (384)
T 1vgv_A 1 MKVLTVFGTR---PEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEG 77 (384)
T ss_dssp CEEEEEECSH---HHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHHH
T ss_pred CeEEEEeccc---HHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCCCccHHHHHHHHHHH
Confidence 4677776642 223456789999999994 88876654322 122233334332 22221 123
Q ss_pred HHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHH-HHhccEEEccC
Q 004092 207 KASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKV-FNRATVVVFPD 285 (774)
Q Consensus 207 l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~-~~~a~~vv~ps 285 (774)
+..+++..+||+||+|+.....+...+.. +..++|+|++.|+...... + ....... .+.. ...++.+..++
T Consensus 78 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a-~~~~ip~v~~~~~~~~~~~---~-~~~~~~~---~~~~~~~~~d~ii~~s 149 (384)
T 1vgv_A 78 LKPILAEFKPDVVLVHGDTTTTLATSLAA-FYQRIPVGHVEAGLRTGDL---Y-SPWPEEA---NRTLTGHLAMYHFSPT 149 (384)
T ss_dssp HHHHHHHHCCSEEEEETTCHHHHHHHHHH-HTTTCCEEEESCCCCCSCT---T-SSTTHHH---HHHHHHTTCSEEEESS
T ss_pred HHHHHHHhCCCEEEEeCCchHHHHHHHHH-HHHCCCEEEEecccccccc---c-CCCchHh---hHHHHHhhccEEEcCc
Confidence 45567778999999997633223333433 3567999998886321100 0 0000110 1111 23466666665
Q ss_pred Ccch--hhcccCCCCCEEEeCCCC-CCcccccccC----chhhHHHHHHhC-CCCCC-EEEEEEeccccc-ccccccHHH
Q 004092 286 YVLP--MMYSAFDAGNYYVIPGSP-AKAWEADTNM----DLYNDTVRVKMG-FKPDD-LVIAIVGTQFMY-RGLWLEHAL 355 (774)
Q Consensus 286 ~~~~--~i~~~v~~~ki~vIpg~g-vd~~~~~~~~----~~~k~~lR~~lg-l~~~~-~vIl~vGsrl~~-~KgiKg~~l 355 (774)
.... ....+++.+++.++++ | +|...+.... ...+..+++++| +++++ ++++++| ++.+ . ||++.
T Consensus 150 ~~~~~~l~~~g~~~~~i~vi~n-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~g-r~~~~~---kg~~~ 224 (384)
T 1vgv_A 150 ETSRQNLLRENVADSRIFITGN-TVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGH-RRESFG---RGFEE 224 (384)
T ss_dssp HHHHHHHHHTTCCGGGEEECCC-HHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECC-CBSSCC---HHHHH
T ss_pred HHHHHHHHHcCCChhhEEEeCC-hHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeC-Cccccc---hHHHH
Confidence 4422 2223455567888884 4 3331111000 001125667777 75544 4566777 6654 4 78999
Q ss_pred HHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCcc
Q 004092 356 ILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFL 433 (774)
Q Consensus 356 LLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~ 433 (774)
+++|+..+.+++|+ +++++++|+. ..+.+.+++++. ..+ +|.|+|.. +++..+|+.||++|+||
T Consensus 225 li~a~~~l~~~~~~-------~~l~i~~g~~-~~~~~~l~~~~~---~~~-~v~~~g~~~~~~~~~~~~~ad~~v~~S-- 290 (384)
T 1vgv_A 225 ICHALADIATTHQD-------IQIVYPVHLN-PNVREPVNRILG---HVK-NVILIDPQEYLPFVWLMNHAWLILTDS-- 290 (384)
T ss_dssp HHHHHHHHHHHCTT-------EEEEEECCBC-HHHHHHHHHHHT---TCT-TEEEECCCCHHHHHHHHHHCSEEEESS--
T ss_pred HHHHHHHHHhhCCC-------eEEEEEcCCC-HHHHHHHHHHhh---cCC-CEEEeCCCCHHHHHHHHHhCcEEEECC--
Confidence 99999999888887 9998875532 124455555543 234 79996643 78999999999999999
Q ss_pred CcCCccHHHHHHHHcCCCEEEcCC-cccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhc
Q 004092 434 EEQTFPEILVKALCFRKPIIAPDL-SNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNL 512 (774)
Q Consensus 434 E~qGfp~~llEAMA~G~PVIatd~-ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~f 512 (774)
. | +++|||+||+|||+++. ++.+|++.+| +|+++++ |+++|+++|.++++| ++.+++|+++++++++.|
T Consensus 291 g--~---~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d---~~~~~~~~~~~~~~~~~~ 360 (384)
T 1vgv_A 291 G--G---IQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKD---ENEYQAMSRAHNPYGDGQ 360 (384)
T ss_dssp S--T---GGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHC---HHHHHHHHSSCCTTCCSC
T ss_pred c--c---hHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhC---hHHHhhhhhccCCCcCCC
Confidence 2 3 38999999999999987 8999999888 8999987 999999999999999 999999999998877789
Q ss_pred CHHHHHHHHHHHHHHHhc
Q 004092 513 MALETIEGYAMLLENVLK 530 (774)
Q Consensus 513 s~~~~a~~y~~L~e~ll~ 530 (774)
+++++++.+.++|+++.+
T Consensus 361 ~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 361 ACSRILEALKNNRISLGS 378 (384)
T ss_dssp HHHHHHHHHHHTCCCC--
T ss_pred HHHHHHHHHHHHHHhhcc
Confidence 999999999888776543
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-25 Score=241.39 Aligned_cols=340 Identities=11% Similarity=0.062 Sum_probs=218.8
Q ss_pred CCeEEEEecCCCCChHHHHHHHHHHHHHHc-C-CeEEEEEcCCCcc--hhhhhhcCccE-EEccc--------------c
Q 004092 144 KPQLALVFPDLLIDPQQLQMVTIAIALREI-G-YAIQVYSLEDGRA--HEVWRNIGVPV-AILQT--------------G 204 (774)
Q Consensus 144 k~rialV~~~L~~GG~e~~v~~Lak~L~~~-G-~eV~V~t~~~~~~--~~~~~~~gi~i-~~l~~--------------~ 204 (774)
++||+++.+... ....+..+++.|.+. | |++.+++...+.. .......++.. ..+.. .
T Consensus 8 ~mkIl~v~~~~~---~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T 3beo_A 8 RLKVMTIFGTRP---EAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRGL 84 (375)
T ss_dssp CEEEEEEECSHH---HHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHHHH
T ss_pred CceEEEEecCcH---HHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCCCcccHHHHHHHHH
Confidence 478999986532 222456788888876 4 8887776554321 11122233332 11111 0
Q ss_pred hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHH-HHHhccEEEc
Q 004092 205 REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKK-VFNRATVVVF 283 (774)
Q Consensus 205 ~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~-~~~~a~~vv~ 283 (774)
..+.++++..+||+||+|+.........+.. +..++|+|++.|+.... ..+ ...... ..+. ....++.+..
T Consensus 85 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~-~~~~ip~v~~~~~~~~~---~~~-~~~~~~---~~~~~~~~~~d~ii~ 156 (375)
T 3beo_A 85 EGLDKVMKEAKPDIVLVHGDTTTTFIASLAA-FYNQIPVGHVEAGLRTW---DKY-SPYPEE---MNRQLTGVMADLHFS 156 (375)
T ss_dssp HHHHHHHHHHCCSEEEEETTSHHHHHHHHHH-HHTTCCEEEESCCCCCS---CTT-SSTTHH---HHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHHHHHH-HHHCCCEEEEecccccc---ccc-CCChhH---hhhhHHhhhhheeeC
Confidence 1244557778999999987644223333332 24578999877753111 000 000011 1111 1233666666
Q ss_pred cCCcch--hhcccCCCCCEEEeCCCC-CCcccccccCchhhHHHHHHhCCCCCCEEEEEEeccccc-ccccccHHHHHHH
Q 004092 284 PDYVLP--MMYSAFDAGNYYVIPGSP-AKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMY-RGLWLEHALILRA 359 (774)
Q Consensus 284 ps~~~~--~i~~~v~~~ki~vIpg~g-vd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~-~KgiKg~~lLLeA 359 (774)
++.... ....+++.+++.++++ | +|...+.... ..+..+++++ +++.++++++| ++.+ . ||++.+++|
T Consensus 157 ~s~~~~~~~~~~g~~~~~i~vi~n-~~~d~~~~~~~~-~~~~~~~~~~--~~~~~vl~~~g-r~~~~~---K~~~~li~a 228 (375)
T 3beo_A 157 PTAKSATNLQKENKDESRIFITGN-TAIDALKTTVKE-TYSHPVLEKL--GNNRLVLMTAH-RRENLG---EPMRNMFRA 228 (375)
T ss_dssp SSHHHHHHHHHTTCCGGGEEECCC-HHHHHHHHHCCS-SCCCHHHHTT--TTSEEEEEECC-CGGGTT---HHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCcccEEEECC-hhHhhhhhhhhh-hhhHHHHHhc--cCCCeEEEEec-ccccch---hHHHHHHHH
Confidence 655422 2223455678999985 5 6653222111 0122344444 34445566667 7654 4 889999999
Q ss_pred HHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCC
Q 004092 360 LLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQT 437 (774)
Q Consensus 360 ~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qG 437 (774)
+..+.+++|+ +++++.+|+. ..+.+.++++. +..+ +|.|+|+. .++..+|+.||++|+||
T Consensus 229 ~~~l~~~~~~-------~~~i~~~g~~-~~~~~~~~~~~---~~~~-~v~~~g~~~~~~~~~~~~~ad~~v~~s------ 290 (375)
T 3beo_A 229 IKRLVDKHED-------VQVVYPVHMN-PVVRETANDIL---GDYG-RIHLIEPLDVIDFHNVAARSYLMLTDS------ 290 (375)
T ss_dssp HHHHHHHCTT-------EEEEEECCSC-HHHHHHHHHHH---TTCT-TEEEECCCCHHHHHHHHHTCSEEEECC------
T ss_pred HHHHHhhCCC-------eEEEEeCCCC-HHHHHHHHHHh---hccC-CEEEeCCCCHHHHHHHHHhCcEEEECC------
Confidence 9999888887 8865533653 22333333332 3334 79997755 58999999999999998
Q ss_pred ccHHHHHHHHcCCCEEEcCC-cccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHH
Q 004092 438 FPEILVKALCFRKPIIAPDL-SNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALE 516 (774)
Q Consensus 438 fp~~llEAMA~G~PVIatd~-ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~ 516 (774)
|++++|||+||+|||+++. ++.+|++.+| +|+++++ |+++|+++|.++++| ++.+++|++++++++++|+|++
T Consensus 291 -g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d~~~la~~i~~ll~~---~~~~~~~~~~~~~~~~~~~~~~ 364 (375)
T 3beo_A 291 -GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-DEETIFSLADELLSD---KEAHDKMSKASNPYGDGRASER 364 (375)
T ss_dssp -HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-CHHHHHHHHHHHHHC---HHHHHHHCCCCCTTCCSCHHHH
T ss_pred -CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-CHHHHHHHHHHHHhC---hHhHhhhhhcCCCCCCCcHHHH
Confidence 4569999999999999964 8999999888 8999986 999999999999999 9999999999988777899999
Q ss_pred HHHHHHHHHH
Q 004092 517 TIEGYAMLLE 526 (774)
Q Consensus 517 ~a~~y~~L~e 526 (774)
+++.+.++++
T Consensus 365 i~~~~~~~~~ 374 (375)
T 3beo_A 365 IVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999888764
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=247.84 Aligned_cols=212 Identities=8% Similarity=-0.023 Sum_probs=168.3
Q ss_pred CCEEEeCCCCCCcccccccCch---h-hHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCC
Q 004092 298 GNYYVIPGSPAKAWEADTNMDL---Y-NDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENES 373 (774)
Q Consensus 298 ~ki~vIpg~gvd~~~~~~~~~~---~-k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~ 373 (774)
.++.+|| +|+|...|...... . ...+|++++ ++++|+++| |+.+. ||++.+|+|++.+.+++|+ .
T Consensus 219 ~~v~vip-~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~~vil~Vg-Rl~~~---Kgi~~ll~A~~~ll~~~p~---~ 287 (482)
T 1uqt_A 219 FRTEVYP-IGIEPKEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVE-RLDYS---KGLPERFLAYEALLEKYPQ---H 287 (482)
T ss_dssp EEEEECC-CCCCHHHHHHHHHSCCCHHHHHHHHHTT---TCEEEEEEC-CBCGG---GCHHHHHHHHHHHHHHCGG---G
T ss_pred EEEEEEe-ccCCHHHHHHHhcCcchHHHHHHHHHhC---CCEEEEEEe-CCccc---CCHHHHHHHHHHHHHhCcc---c
Confidence 4678888 58997554322110 0 346777776 567999999 99998 9999999999999988875 1
Q ss_pred CCCeEEEEEeCCCC---C---chHHHHHHHHHHcCC----CC-ccEEE-ccCc--ccHHHHHHHcCEEEEcCccCcCCcc
Q 004092 374 NSPIKVMILSGDST---S---NYSVVIEAIAHNLHY----PL-GVVKH-MAAE--GDVDSVLNTADVVIYGSFLEEQTFP 439 (774)
Q Consensus 374 ~~~v~LvIvGG~~~---e---~Y~~~L~~la~~lgL----~~-~~V~f-lG~~--~dl~~~l~aaDI~V~PS~~E~qGfp 439 (774)
..+++|+++|++.. + ++.+.+++++.+++. .+ ..|.+ .|.+ +++..+|++||++|+||..| |||
T Consensus 288 ~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~E--Gfg 365 (482)
T 1uqt_A 288 HGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRD--GMN 365 (482)
T ss_dssp TTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSB--SCC
T ss_pred cCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcc--cCC
Confidence 22488999994322 2 245566666655432 11 02665 5654 89999999999999999999 899
Q ss_pred HHHHHHHHcCC-----CEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHHHhcC
Q 004092 440 EILVKALCFRK-----PIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKIS-PFARNIASIGRRSVKNLM 513 (774)
Q Consensus 440 ~~llEAMA~G~-----PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~-~~r~~m~~~ar~~ak~fs 513 (774)
++++||||||+ |||+|+.+|..+.+. +|+++++.|++++|++|.+++++ + +.++++++++++.+++|+
T Consensus 366 Lv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL~~---~~~~r~~~~~~~~~~v~~~s 439 (482)
T 1uqt_A 366 LVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALTM---SLAERISRHAEMLDVIVKND 439 (482)
T ss_dssp HHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCC
Confidence 99999999997 899999888888873 69999999999999999999985 4 567789999999998899
Q ss_pred HHHHHHHHHHHHHHH
Q 004092 514 ALETIEGYAMLLENV 528 (774)
Q Consensus 514 ~~~~a~~y~~L~e~l 528 (774)
++.+++.|.+.|+++
T Consensus 440 ~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 440 INHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999886
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=213.84 Aligned_cols=184 Identities=16% Similarity=0.232 Sum_probs=157.5
Q ss_pred CCCCccccc--ccCc---hhhHHHHHHhCCCCCCEEEEEEecccc-cccccccHHHHHHHHHHch--hhcccCCCCCCCe
Q 004092 306 SPAKAWEAD--TNMD---LYNDTVRVKMGFKPDDLVIAIVGTQFM-YRGLWLEHALILRALLPLF--SEVSVENESNSPI 377 (774)
Q Consensus 306 ~gvd~~~~~--~~~~---~~k~~lR~~lgl~~~~~vIl~vGsrl~-~~KgiKg~~lLLeA~~~L~--~~~p~~~~~~~~v 377 (774)
+|+|...+. +... ..+..++++++++++ ++++++| ++. +. ||++.+++|+..+. +++|+ +
T Consensus 4 ngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~-~~i~~~G-~~~~~~---K~~~~li~a~~~l~~~~~~~~-------~ 71 (200)
T 2bfw_A 4 NGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIG-RFDRGQ---KGVDVLLKAIEILSSKKEFQE-------M 71 (200)
T ss_dssp -CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC-EEEEEES-CBCSSS---SCHHHHHHHHHHHTTSGGGGG-------E
T ss_pred CccChhhccccccccchhhHHHHHHHHcCCCCC-CEEEEee-cccccc---CCHHHHHHHHHHHHhhccCCC-------e
Confidence 467764444 3221 015678899998755 4899999 777 77 99999999999998 77788 9
Q ss_pred EEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEE-ccCcc--cHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEE
Q 004092 378 KVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKH-MAAEG--DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPII 453 (774)
Q Consensus 378 ~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~f-lG~~~--dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVI 453 (774)
+|+|+| |+. .+.+.+++++++++ +|.| +|+++ ++..+|+.||++|+||..| |+|++++|||+||+|||
T Consensus 72 ~l~i~G~~~~--~~~~~l~~~~~~~~----~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e--~~~~~~~Ea~a~G~PvI 143 (200)
T 2bfw_A 72 RFIIIGKGDP--ELEGWARSLEEKHG----NVKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPI 143 (200)
T ss_dssp EEEEECCBCH--HHHHHHHHHHHHCT----TEEEECSCCCHHHHHHHHTTCSEEEECCSCC--SSCHHHHHHHHTTCEEE
T ss_pred EEEEECCCCh--HHHHHHHHHHHhcC----CEEEEeccCCHHHHHHHHHHCCEEEECCCCC--CccHHHHHHHHCCCCEE
Confidence 999999 551 24478888998776 4999 99884 9999999999999999998 89999999999999999
Q ss_pred EcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHH-cCCCcHHHHHHHHHHHHHHHhcC
Q 004092 454 APDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVIT-NGKISPFARNIASIGRRSVKNLM 513 (774)
Q Consensus 454 atd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~-d~~~~~~r~~m~~~ar~~ak~fs 513 (774)
+++.++..+++ ++.+|++++++|+++++++|.++++ | ++.+++|++++++.+++|+
T Consensus 144 ~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~---~~~~~~~~~~a~~~~~~fs 200 (200)
T 2bfw_A 144 ASAVGGLRDII-TNETGILVKAGDPGELANAILKALELS---RSDLSKFRENCKKRAMSFS 200 (200)
T ss_dssp EESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHTC
T ss_pred EeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHhcC
Confidence 99999999999 8889999999999999999999999 9 9999999999999985564
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=239.65 Aligned_cols=306 Identities=10% Similarity=0.074 Sum_probs=200.1
Q ss_pred cCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhh--------HHHhhhh----------hhhHHHHHHHHHH
Q 004092 214 LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATR--------ARNYASS----------GQLELLNDWKKVF 275 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~--------~~k~~~~----------~~~~li~~~~~~~ 275 (774)
..+||+|+|.+..+ ....++.....++|+|+|+|...+.+. ....+.. .........+...
T Consensus 180 ~~pdIiH~HDW~tg-~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga 258 (725)
T 3nb0_A 180 QHAIVAHFHEWLAG-VALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAA 258 (725)
T ss_dssp SEEEEEEEESGGGC-THHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCcEEEeCchhhh-HHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHH
Confidence 45999999999985 555555444678999999997532211 0000110 0112344455566
Q ss_pred HhccEEEccCCcchh-hcccCCCCCEEEeCCCCCCcccccccCch--h----hHHHHHH--------hCCCCCCEEEEEE
Q 004092 276 NRATVVVFPDYVLPM-MYSAFDAGNYYVIPGSPAKAWEADTNMDL--Y----NDTVRVK--------MGFKPDDLVIAIV 340 (774)
Q Consensus 276 ~~a~~vv~ps~~~~~-i~~~v~~~ki~vIpg~gvd~~~~~~~~~~--~----k~~lR~~--------lgl~~~~~vIl~v 340 (774)
..++.+...+..+.. +..-+....-.+|| +|+|...+.+.... . +.++.+. ++++.++.+++++
T Consensus 259 ~~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIp-NGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifi 337 (725)
T 3nb0_A 259 HSADVFTTVSQITAFEAEHLLKRKPDGILP-NGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFI 337 (725)
T ss_dssp HHSSEEEESSHHHHHHHHHHTSSCCSEECC-CCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEE
T ss_pred HhCCEEEECCHHHHHHHHHHhcCCCCEEEc-CCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEE
Confidence 788888777666221 11111221113388 49998655543111 1 2222221 2455455555554
Q ss_pred ecccc-cccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCC------------------------------
Q 004092 341 GTQFM-YRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTS------------------------------ 388 (774)
Q Consensus 341 Gsrl~-~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e------------------------------ 388 (774)
.+|+. .+ ||++++++|+.+|............-+.|+|+. +....
T Consensus 338 vgRle~~n---KGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 414 (725)
T 3nb0_A 338 AGRYEYKN---KGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIF 414 (725)
T ss_dssp ESSCCTTT---TTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccc---CCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHH
Confidence 33888 68 999999999999975421111122226777776 41110
Q ss_pred -------------------------------------------------------chHHHHHHHHHHcCCCCcc------
Q 004092 389 -------------------------------------------------------NYSVVIEAIAHNLHYPLGV------ 407 (774)
Q Consensus 389 -------------------------------------------------------~Y~~~L~~la~~lgL~~~~------ 407 (774)
...+.+...++++++.+ .
T Consensus 415 ~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N-~~~drVK 493 (725)
T 3nb0_A 415 DHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFN-SPSDRVK 493 (725)
T ss_dssp HHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCC-CTTCSEE
T ss_pred HHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCC-CcCCcee
Confidence 01223344556677776 4
Q ss_pred EEEcc-Cc--------ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccC-------ccEE
Q 004092 408 VKHMA-AE--------GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDR-------VNGY 471 (774)
Q Consensus 408 V~flG-~~--------~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg-------~~G~ 471 (774)
|+|++ +. .++.++|+.||++|+||.+| |||++++||||||+|||+|+.+|+.++|.++ .+|+
T Consensus 494 VIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~E--gfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~ 571 (725)
T 3nb0_A 494 MIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYE--PWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGI 571 (725)
T ss_dssp EEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSB--SSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTE
T ss_pred EEEeccccCCCCccchhHHHHHHhhceEEEeccccC--CCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceE
Confidence 66665 43 26899999999999999999 8999999999999999999999999999875 3698
Q ss_pred EEcC---CCHHHHHHHHHHHH----H-cCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 472 LFPK---ENIKALTHIILQVI----T-NGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 472 Lv~~---~d~e~La~aI~~Ll----~-d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
++++ .|+++++++|.+++ . + +..+..|++++++.+++|+|+++++.|.++|+.++.
T Consensus 572 lV~~rd~~d~ee~aeaLa~aL~~f~~~d---~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 572 YIVDRRFKAPDESVEQLVDYMEEFVKKT---RRQRINQRNATEALSDLLDWKRMGLEYVKARQLALR 635 (725)
T ss_dssp EEECCSSSCHHHHHHHHHHHHHHHHTCC---HHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 8853 46666655555554 3 5 566778999999888999999999999999999874
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=203.61 Aligned_cols=160 Identities=19% Similarity=0.221 Sum_probs=137.9
Q ss_pred CEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEcc
Q 004092 334 DLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMA 412 (774)
Q Consensus 334 ~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG 412 (774)
+++++++| ++.+. ||++.+++|+..+. +.|+ ++|+|+| |+.. +.++++++++++ +|.+ |
T Consensus 2 ~~~i~~~G-~~~~~---Kg~~~li~a~~~l~-~~~~-------~~l~i~G~g~~~----~~~~~~~~~~~~---~v~~-g 61 (166)
T 3qhp_A 2 PFKIAMVG-RYSNE---KNQSVLIKAVALSK-YKQD-------IVLLLKGKGPDE----KKIKLLAQKLGV---KAEF-G 61 (166)
T ss_dssp CEEEEEES-CCSTT---TTHHHHHHHHHTCT-TGGG-------EEEEEECCSTTH----HHHHHHHHHHTC---EEEC-C
T ss_pred ceEEEEEe-ccchh---cCHHHHHHHHHHhc-cCCC-------eEEEEEeCCccH----HHHHHHHHHcCC---eEEE-e
Confidence 46899999 88888 99999999999985 4577 9999999 7664 788899998887 4888 9
Q ss_pred Cc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCC-CEEE-cCCcccccccccCccEEEEcCCCHHHHHHHHHHH
Q 004092 413 AE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRK-PIIA-PDLSNIRKYVDDRVNGYLFPKENIKALTHIILQV 488 (774)
Q Consensus 413 ~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~-PVIa-td~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~L 488 (774)
++ +++..+|+.||++|+||..| |||++++|||+||+ |||+ ++.++..+++.++.+ +++++|+++++++|.++
T Consensus 62 ~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l 137 (166)
T 3qhp_A 62 FVNSNELLEILKTCTLYVHAANVE--SEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWW 137 (166)
T ss_dssp CCCHHHHHHHHTTCSEEEECCCSC--CCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHhCCEEEECCccc--CccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHH
Confidence 86 78999999999999999988 89999999999998 9999 568899999988654 88899999999999999
Q ss_pred HHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHH
Q 004092 489 ITNGKISPFARNIASIGRRSVKNLMALETIEG 520 (774)
Q Consensus 489 l~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~ 520 (774)
++| ++.+++|++++++.+++|+|++++++
T Consensus 138 ~~~---~~~~~~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 138 LEN---KLERERMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHC---HHHHHHHHHHHHHHHHHHC-------
T ss_pred HhC---HHHHHHHHHHHHHHHHHCChhhhhcC
Confidence 999 99999999999999989999998763
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.5e-22 Score=225.52 Aligned_cols=287 Identities=10% Similarity=0.028 Sum_probs=204.1
Q ss_pred CccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCc----hhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch-
Q 004092 215 NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEG----TLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP- 289 (774)
Q Consensus 215 ~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~----~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~- 289 (774)
.-|+|.+|..... .+..++.+...+.++.+.+|.. .++..+... ....++ .....++.++|......
T Consensus 149 ~~D~VwVhDYhL~-llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~---~r~ell----~gll~~DligF~t~~y~~ 220 (496)
T 3t5t_A 149 ADPVYLVHDYQLV-GVPALLREQRPDAPILLFVHIPWPSADYWRILPKE---IRTGIL----HGMLPATTIGFFADRWCR 220 (496)
T ss_dssp SSCEEEEESGGGT-THHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHH---HHHHHH----HHHTTSSEEEESSHHHHH
T ss_pred CCCEEEEeCccHh-HHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHh---HHHHHH----HHHHhCCEEEEecHHHHH
Confidence 5789999999884 6666666656788999999962 111111100 001111 12223344444333200
Q ss_pred -------hhc---------ccC----CCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccc
Q 004092 290 -------MMY---------SAF----DAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGL 349 (774)
Q Consensus 290 -------~i~---------~~v----~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~Kg 349 (774)
.+. ..+ ...++.++| +|+|...+.......+..+|++++ ++++|+++| |+.+.
T Consensus 221 ~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP-~GID~~~f~~~~~~~~~~lr~~~~---~~~lIl~Vg-RLd~~-- 293 (496)
T 3t5t_A 221 NFLESVADLLPDARIDREAMTVEWRGHRTRLRTMP-LGYSPLTLDGRNPQLPEGIEEWAD---GHRLVVHSG-RTDPI-- 293 (496)
T ss_dssp HHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECC-CCBCGGGC----CCCCTTHHHHHT---TSEEEEEEE-ESSGG--
T ss_pred HHHHHHHHHhcCCcccccCCeEEECCEEEEEEEec-cEeCHHHhchhhHHHHHHHHHHhC---CceEEEEcc-cCccc--
Confidence 000 000 113567788 699986665443322356777877 578999999 99999
Q ss_pred cccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCC------CchHHHHHHHHHHcCCC--CccEEEccCc--ccHHH
Q 004092 350 WLEHALILRALLPLFSEVSVENESNSPIKVMILSGDST------SNYSVVIEAIAHNLHYP--LGVVKHMAAE--GDVDS 419 (774)
Q Consensus 350 iKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~------e~Y~~~L~~la~~lgL~--~~~V~flG~~--~dl~~ 419 (774)
||+..+|+|+ .+.+++|+ .. ++.|+++|++.+ .++...+++++.+++.. ...|.|+|.+ +++..
T Consensus 294 -KGi~~lL~Af-~ll~~~P~---~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~a 367 (496)
T 3t5t_A 294 -KNAERAVRAF-VLAARGGG---LE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIA 367 (496)
T ss_dssp -GCHHHHHHHH-HHHHHTSS---CT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHH
T ss_pred -cCHHHHHHHH-HHHHhCcc---cc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHH
Confidence 9999999999 99888886 12 478998983321 13455666666654321 0048999965 78999
Q ss_pred HHHHcCEEEEcCccCcCCccHHHHHHHHcC---CCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCc-
Q 004092 420 VLNTADVVIYGSFLEEQTFPEILVKALCFR---KPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKIS- 495 (774)
Q Consensus 420 ~l~aaDI~V~PS~~E~qGfp~~llEAMA~G---~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~- 495 (774)
+|++||++|+||..| |||++.+|||||| .|+|+|+.+|..+.+.+ +|++|+|.|++++|++|.+++++ +
T Consensus 368 ly~~ADv~vv~SlrE--GfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~~--~allVnP~D~~~lA~AI~~aL~m---~~ 440 (496)
T 3t5t_A 368 CFRRADLLIFNSTVD--GQNLSTFEAPLVNERDADVILSETCGAAEVLGE--YCRSVNPFDLVEQAEAISAALAA---GP 440 (496)
T ss_dssp HHHHCSEEEECCSSB--SCCSHHHHHHHHCSSCCEEEEETTBTTHHHHGG--GSEEECTTBHHHHHHHHHHHHHC---CH
T ss_pred HHHhccEEEECcccc--cCChhHHHHHHhCCCCCCEEEeCCCCCHHHhCC--CEEEECCCCHHHHHHHHHHHHcC---CH
Confidence 999999999999999 9999999999997 89999999999888843 69999999999999999999997 6
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 004092 496 PFARNIASIGRRSVKNLMALETIEGYAMLLENVL 529 (774)
Q Consensus 496 ~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll 529 (774)
++++++.+++++.++++++...++.|.+-++.+-
T Consensus 441 ~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 441 RQRAEAAARRRDAARPWTLEAWVQAQLDGLAADH 474 (496)
T ss_dssp HHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcc
Confidence 5677888999999999999999999999888763
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=215.30 Aligned_cols=298 Identities=12% Similarity=0.030 Sum_probs=201.5
Q ss_pred CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhh--cCcc--EEEccc--chhHHHHhhhcCccEEEEcCCchhHH
Q 004092 156 IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRN--IGVP--VAILQT--GREKASFVNWLNYDGILVNSLEAKVV 229 (774)
Q Consensus 156 ~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~--~gi~--i~~l~~--~~~l~~~i~~~~~DIIhvhs~~~~~~ 229 (774)
..|....+..|++.|.+.| +|.+.+...... ..... .++. .. ++. ...+.++++..+||+||++.....+.
T Consensus 49 s~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~-~~~~~~~~~v~~~~~-~p~~~~~~l~~~l~~~~pDiv~~~~~~~~~~ 125 (374)
T 2xci_A 49 SIGEFNTFLPILKELKREH-RILLTYFSPRAR-EYLKTKSDFYDCLHP-LPLDNPFSVKRFEELSKPKALIVVEREFWPS 125 (374)
T ss_dssp SHHHHHHHHHHHHHHHHHS-CEEEEESCGGGH-HHHHTTGGGCSEEEE-CCCSSHHHHHHHHHHHCCSEEEEESCCCCHH
T ss_pred CHHHHHHHHHHHHHHHhcC-CEEEEEcCCcHH-HHHHHhcccccceeE-CCCCCHHHHHHHHHHhCCCEEEEECccCcHH
Confidence 3577889999999999999 887666543221 11111 2333 32 332 34566778889999999864433222
Q ss_pred HHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhh--cccCCCCCEEEeCCCC
Q 004092 230 ISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMM--YSAFDAGNYYVIPGSP 307 (774)
Q Consensus 230 l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i--~~~v~~~ki~vIpg~g 307 (774)
+...+ . . |++...+.... + . ..+..+..++.+.+++...... ..+++ ++.++++..
T Consensus 126 ~~~~~---~-~-p~~~~~~~~~~---------~---~---~~~~~~~~~d~ii~~S~~~~~~l~~~g~~--ki~vi~n~~ 183 (374)
T 2xci_A 126 LIIFT---K-V-PKILVNAYAKG---------S---L---IEKILSKKFDLIIMRTQEDVEKFKTFGAK--RVFSCGNLK 183 (374)
T ss_dssp HHHHC---C-S-CEEEEEECCCC---------C---H---HHHHHHTTCSEEEESCHHHHHHHHTTTCC--SEEECCCGG
T ss_pred HHHHH---h-C-CEEEEEeecCc---------h---H---HHHHHHHhCCEEEECCHHHHHHHHHcCCC--eEEEcCCCc
Confidence 22222 1 1 77654442110 0 0 2334456677777776663222 22343 888888522
Q ss_pred CCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCC
Q 004092 308 AKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDS 386 (774)
Q Consensus 308 vd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~ 386 (774)
.+. .... +.. + +.+++++.| + . . ||++.+++|++.+.+++|+ ++|+|+| |+.
T Consensus 184 f~~-----~~~~-----~~~--l--~~~vi~~~~-~-~-~---k~~~~ll~A~~~l~~~~p~-------~~lvivG~g~~ 236 (374)
T 2xci_A 184 FIC-----QKGK-----GIK--L--KGEFIVAGS-I-H-T---GEVEIILKAFKEIKKTYSS-------LKLILVPRHIE 236 (374)
T ss_dssp GCC-----CCCS-----CCC--C--SSCEEEEEE-E-C-G---GGHHHHHHHHHHHHTTCTT-------CEEEEEESSGG
T ss_pred cCC-----CcCh-----hhh--h--cCCEEEEEe-C-C-C---chHHHHHHHHHHHHhhCCC-------cEEEEECCCHH
Confidence 221 0000 001 1 124555544 3 3 3 8899999999999988888 9999999 765
Q ss_pred CCchHHHHHHHHHHcCCC--------CccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEc-CC
Q 004092 387 TSNYSVVIEAIAHNLHYP--------LGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAP-DL 457 (774)
Q Consensus 387 ~e~Y~~~L~~la~~lgL~--------~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIat-d~ 457 (774)
+ .+.++++++++++. + +|.+.|..+|+..+|+.||++++||..++ ++|++++||||||+|||++ +.
T Consensus 237 ~---~~~l~~~~~~~gl~~~~~~~~~~-~v~~~~~~~dl~~~y~~aDv~vl~ss~~e-~gg~~~lEAmA~G~PVI~~~~~ 311 (374)
T 2xci_A 237 N---AKIFEKKARDFGFKTSFFENLEG-DVILVDRFGILKELYPVGKIAIVGGTFVN-IGGHNLLEPTCWGIPVIYGPYT 311 (374)
T ss_dssp G---HHHHHHHHHHTTCCEEETTCCCS-SEEECCSSSCHHHHGGGEEEEEECSSSSS-SCCCCCHHHHTTTCCEEECSCC
T ss_pred H---HHHHHHHHHHCCCceEEecCCCC-cEEEECCHHHHHHHHHhCCEEEECCcccC-CCCcCHHHHHHhCCCEEECCCc
Confidence 3 24688899988886 3 68999988999999999999988876643 6889999999999999975 78
Q ss_pred cccccccccC-ccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH-hcCH
Q 004092 458 SNIRKYVDDR-VNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVK-NLMA 514 (774)
Q Consensus 458 ggi~EiV~dg-~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak-~fs~ 514 (774)
++.+|++.+. .+|++++++|+++|+++|.++++| +.+++|+++|++.++ ++..
T Consensus 312 ~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d----~~r~~mg~~ar~~~~~~~ga 366 (374)
T 2xci_A 312 HKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV----KKEIKVEEKSREIKGCYLEK 366 (374)
T ss_dssp TTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS----CCCCCHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHhcccH
Confidence 8899988663 478899999999999999999987 245679999999884 4543
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.87 E-value=5.9e-22 Score=195.33 Aligned_cols=152 Identities=18% Similarity=0.154 Sum_probs=132.0
Q ss_pred HhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHH--HcCC
Q 004092 327 KMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAH--NLHY 403 (774)
Q Consensus 327 ~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~--~lgL 403 (774)
.+.++.++++++++| ++.+. ||++.+++|+..+ ++ ++|+|+| |+.. +.++++++ .+++
T Consensus 16 ~~~~~~~~~~i~~~G-~~~~~---Kg~~~li~a~~~l----~~-------~~l~i~G~~~~~----~~l~~~~~~~~~~l 76 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVN-RIYPE---KRIELQLEVFKKL----QD-------EKLYIVGWFSKG----DHAERYARKIMKIA 76 (177)
T ss_dssp TCCCCCCCSCEEEEC-CSSGG---GTHHHHHHHHHHC----TT-------SCEEEEBCCCTT----STHHHHHHHHHHHS
T ss_pred ccccCCCCCEEEEEe-ccccc---cCHHHHHHHHHhC----CC-------cEEEEEecCccH----HHHHHHHHhhhccc
Confidence 345677888999999 78887 9999999999988 45 8999999 7766 34567777 7788
Q ss_pred CCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHH
Q 004092 404 PLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKAL 481 (774)
Q Consensus 404 ~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~L 481 (774)
.+ +|.|+|++ +++..+|+.||++|+||..| ++|++++|||+||+|||+++.++..+++.++.+|+++ +.|++++
T Consensus 77 ~~-~v~~~g~~~~~e~~~~~~~adi~v~ps~~e--~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l 152 (177)
T 2f9f_A 77 PD-NVKFLGSVSEEELIDLYSRCKGLLCTAKDE--DFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEI 152 (177)
T ss_dssp CT-TEEEEESCCHHHHHHHHHHCSEEEECCSSC--CSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHH
T ss_pred CC-cEEEeCCCCHHHHHHHHHhCCEEEeCCCcC--CCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHH
Confidence 88 89999988 45999999999999999988 8999999999999999999999999999999999999 8899999
Q ss_pred HHHHHHHHHcCCCcHH-HHHHHHH
Q 004092 482 THIILQVITNGKISPF-ARNIASI 504 (774)
Q Consensus 482 a~aI~~Ll~d~~~~~~-r~~m~~~ 504 (774)
+++|.++++| ++. ++++.++
T Consensus 153 ~~~i~~l~~~---~~~~~~~~~~~ 173 (177)
T 2f9f_A 153 IDAMKKVSKN---PDKFKKDCFRR 173 (177)
T ss_dssp HHHHHHHHHC---TTTTHHHHHHH
T ss_pred HHHHHHHHhC---HHHHHHHHHHH
Confidence 9999999999 764 3344333
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-22 Score=218.72 Aligned_cols=338 Identities=9% Similarity=-0.002 Sum_probs=207.8
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHc-CCeEEEEEcCCCcc--hhhhhhcCccE-EEccc--------------chh
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREI-GYAIQVYSLEDGRA--HEVWRNIGVPV-AILQT--------------GRE 206 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~-G~eV~V~t~~~~~~--~~~~~~~gi~i-~~l~~--------------~~~ 206 (774)
+||+++.+.... ...+..+++.|.+. ||++.+++...... .......++.. ..+.. ...
T Consensus 6 mkIl~v~~~~~~---~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (376)
T 1v4v_A 6 KRVVLAFGTRPE---ATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQ 82 (376)
T ss_dssp EEEEEEECSHHH---HHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHH
T ss_pred eEEEEEEeccHH---HHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHHHHH
Confidence 688888875321 12356789999988 79988776543211 12233344432 12221 113
Q ss_pred HHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCC
Q 004092 207 KASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDY 286 (774)
Q Consensus 207 l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~ 286 (774)
+.++++..+||+||+|......+...+.. +..++|+++ .|+...... .+ ........ .......++.+..++.
T Consensus 83 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a-~~~~ip~v~-~~~~~~~~~--~~-~~~~~~~~--~~~~~~~~~~~~~~s~ 155 (376)
T 1v4v_A 83 AARALKEMGADYVLVHGDTLTTFAVAWAA-FLEGIPVGH-VEAGLRSGN--LK-EPFPEEAN--RRLTDVLTDLDFAPTP 155 (376)
T ss_dssp HHHHHHHTTCSEEEEESSCHHHHHHHHHH-HHTTCCEEE-ETCCCCCSC--TT-SSTTHHHH--HHHHHHHCSEEEESSH
T ss_pred HHHHHHHcCCCEEEEeCChHHHHHHHHHH-HHhCCCEEE-EeCCCcccc--cc-CCCchHHH--HHHHHHHhceeeCCCH
Confidence 44556778999999987654323333333 345799864 443211000 00 00001111 1112234566655654
Q ss_pred cch--hhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHch
Q 004092 287 VLP--MMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLF 364 (774)
Q Consensus 287 ~~~--~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~ 364 (774)
... ....+++.+++.++++..+|...+.. .+..+++++ +++.++++++| |+... |+++.+++|+..+.
T Consensus 156 ~~~~~l~~~g~~~~ki~vi~n~~~d~~~~~~----~~~~~~~~~--~~~~~vl~~~g-r~~~~---k~~~~ll~a~~~l~ 225 (376)
T 1v4v_A 156 LAKANLLKEGKREEGILVTGQTGVDAVLLAA----KLGRLPEGL--PEGPYVTVTMH-RRENW---PLLSDLAQALKRVA 225 (376)
T ss_dssp HHHHHHHTTTCCGGGEEECCCHHHHHHHHHH----HHCCCCTTC--CSSCEEEECCC-CGGGG---GGHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcceEEEECCchHHHHhhhh----hhhHHHHhc--CCCCEEEEEeC-cccch---HHHHHHHHHHHHHH
Confidence 422 22335556778888853344311100 000112222 23455556666 77665 69999999999998
Q ss_pred hhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHH
Q 004092 365 SEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEIL 442 (774)
Q Consensus 365 ~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~l 442 (774)
+++|+ +++++++|+.. .+.+.+++++. . .+ +|.|+|.. .++..+|++||++|+|| + | + +
T Consensus 226 ~~~~~-------~~lv~~~g~~~-~~~~~l~~~~~--~-~~-~v~~~g~~g~~~~~~~~~~ad~~v~~S--~--g--~-~ 286 (376)
T 1v4v_A 226 EAFPH-------LTFVYPVHLNP-VVREAVFPVLK--G-VR-NFVLLDPLEYGSMAALMRASLLLVTDS--G--G--L-Q 286 (376)
T ss_dssp HHCTT-------SEEEEECCSCH-HHHHHHHHHHT--T-CT-TEEEECCCCHHHHHHHHHTEEEEEESC--H--H--H-H
T ss_pred hhCCC-------eEEEEECCCCH-HHHHHHHHHhc--c-CC-CEEEECCCCHHHHHHHHHhCcEEEECC--c--C--H-H
Confidence 88887 88888633211 23356666553 2 34 79999533 38999999999999998 3 3 3 8
Q ss_pred HHHHHcCCCEEEc-CCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 004092 443 VKALCFRKPIIAP-DLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGY 521 (774)
Q Consensus 443 lEAMA~G~PVIat-d~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y 521 (774)
+|||+||+|||++ +.++..+++.++ +|++++ .|+++|+++|.++++| ++.+++|++++ +.|.+...++++
T Consensus 287 lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d~~~la~~i~~ll~d---~~~~~~~~~~~----~~~~~~~~~~~i 357 (376)
T 1v4v_A 287 EEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDPEGVYRVVKGLLEN---PEELSRMRKAK----NPYGDGKAGLMV 357 (376)
T ss_dssp HHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCHHHHHHHHHHHHTC---HHHHHHHHHSC----CSSCCSCHHHHH
T ss_pred HHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CCHHHHHHHHHHHHhC---hHhhhhhcccC----CCCCCChHHHHH
Confidence 8999999999987 578888987665 699996 4999999999999999 98999998643 445555666667
Q ss_pred HHHHHHHhc
Q 004092 522 AMLLENVLK 530 (774)
Q Consensus 522 ~~L~e~ll~ 530 (774)
.++++++++
T Consensus 358 ~~~i~~~~~ 366 (376)
T 1v4v_A 358 ARGVAWRLG 366 (376)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhc
Confidence 777777664
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=191.93 Aligned_cols=325 Identities=13% Similarity=0.138 Sum_probs=202.0
Q ss_pred CCCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc------------------
Q 004092 143 RKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG------------------ 204 (774)
Q Consensus 143 rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~------------------ 204 (774)
|++||++..+ ..||--.-...+|++|.++||+|.+++...+-........++++..++..
T Consensus 1 M~~~i~i~~G--GTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 78 (365)
T 3s2u_A 1 MKGNVLIMAG--GTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELL 78 (365)
T ss_dssp --CEEEEECC--SSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHH
T ss_pred CCCcEEEEcC--CCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHH
Confidence 5677776544 45676667899999999999999999876543333444455555444321
Q ss_pred ---hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEE
Q 004092 205 ---REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVV 281 (774)
Q Consensus 205 ---~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~v 281 (774)
.....+++..+||+|+.+..... ....+.+ +..++|++..-.+ .......+++. ..++.+
T Consensus 79 ~~~~~~~~~l~~~~PDvVi~~g~~~s-~p~~laA-~~~~iP~vihe~n-~~~G~~nr~l~--------------~~a~~v 141 (365)
T 3s2u_A 79 KSLFQALRVIRQLRPVCVLGLGGYVT-GPGGLAA-RLNGVPLVIHEQN-AVAGTANRSLA--------------PIARRV 141 (365)
T ss_dssp HHHHHHHHHHHHHCCSEEEECSSSTH-HHHHHHH-HHTTCCEEEEECS-SSCCHHHHHHG--------------GGCSEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcch-HHHHHHH-HHcCCCEEEEecc-hhhhhHHHhhc--------------ccccee
Confidence 11234567789999999877663 3333333 3567998853322 11111111111 223332
Q ss_pred EccCCcchhhcccC-CCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHH
Q 004092 282 VFPDYVLPMMYSAF-DAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRAL 360 (774)
Q Consensus 282 v~ps~~~~~i~~~v-~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~ 360 (774)
... .. ..+ ...+..++ ++++....+... +...+++++++.++.+|+..... +..+.+++|+
T Consensus 142 ~~~-~~-----~~~~~~~k~~~~-g~pvr~~~~~~~--------~~~~~~~~~~~~ilv~gGs~g~~---~~~~~~~~al 203 (365)
T 3s2u_A 142 CEA-FP-----DTFPASDKRLTT-GNPVRGELFLDA--------HARAPLTGRRVNLLVLGGSLGAE---PLNKLLPEAL 203 (365)
T ss_dssp EES-ST-----TSSCC---CEEC-CCCCCGGGCCCT--------TSSCCCTTSCCEEEECCTTTTCS---HHHHHHHHHH
T ss_pred eec-cc-----ccccCcCcEEEE-CCCCchhhccch--------hhhcccCCCCcEEEEECCcCCcc---ccchhhHHHH
Confidence 221 00 111 12333333 456654222111 22446677777888887777765 6777888999
Q ss_pred HHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccH
Q 004092 361 LPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPE 440 (774)
Q Consensus 361 ~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~ 440 (774)
..+..+.. +.+++++|... .+.+.+..++++. ++.+.++.+|+.++|++||++|..+ | ++
T Consensus 204 ~~l~~~~~--------~~vi~~~G~~~---~~~~~~~~~~~~~---~~~v~~f~~dm~~~l~~aDlvI~ra-----G-~~ 263 (365)
T 3s2u_A 204 AQVPLEIR--------PAIRHQAGRQH---AEITAERYRTVAV---EADVAPFISDMAAAYAWADLVICRA-----G-AL 263 (365)
T ss_dssp HTSCTTTC--------CEEEEECCTTT---HHHHHHHHHHTTC---CCEEESCCSCHHHHHHHCSEEEECC-----C-HH
T ss_pred Hhcccccc--------eEEEEecCccc---cccccceeccccc---ccccccchhhhhhhhccceEEEecC-----C-cc
Confidence 88865432 45555554322 2455555664443 5778899999999999999999654 3 78
Q ss_pred HHHHHHHcCCCEEEcCCcccc--------cccccCccEEEEcCC--CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Q 004092 441 ILVKALCFRKPIIAPDLSNIR--------KYVDDRVNGYLFPKE--NIKALTHIILQVITNGKISPFARNIASIGRRSVK 510 (774)
Q Consensus 441 ~llEAMA~G~PVIatd~ggi~--------EiV~dg~~G~Lv~~~--d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak 510 (774)
++.|||++|+|+|..+.+... +.+.+...|++++.. +++.|+++|.++++| ++.+++|++++++.++
T Consensus 264 Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d---~~~~~~m~~~a~~~~~ 340 (365)
T 3s2u_A 264 TVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMH---PETLRSMADQARSLAK 340 (365)
T ss_dssp HHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC---THHHHHHHHHHHHTCC
T ss_pred hHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCC---HHHHHHHHHHHHhcCC
Confidence 999999999999988766432 344444568888764 589999999999999 9999999999998876
Q ss_pred hcCHHHHHHHHHHHHHH
Q 004092 511 NLMALETIEGYAMLLEN 527 (774)
Q Consensus 511 ~fs~~~~a~~y~~L~e~ 527 (774)
....+++++..+++.+.
T Consensus 341 ~~aa~~ia~~i~~larG 357 (365)
T 3s2u_A 341 PEATRTVVDACLEVARG 357 (365)
T ss_dssp TTHHHHHHHHHHHHC--
T ss_pred ccHHHHHHHHHHHHHcc
Confidence 66667777666665443
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=192.29 Aligned_cols=328 Identities=10% Similarity=-0.008 Sum_probs=202.9
Q ss_pred CCCCCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEccc-----------------
Q 004092 141 GYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQT----------------- 203 (774)
Q Consensus 141 ~~rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~----------------- 203 (774)
..+++||+++.+. .+|....+..+++.|.++||+|.+++... ........|+++..++.
T Consensus 17 ~~~~MrIl~~~~~--~~Gh~~~~~~la~~L~~~GheV~v~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (412)
T 3otg_A 17 EGRHMRVLFASLG--THGHTYPLLPLATAARAAGHEVTFATGEG--FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTD 92 (412)
T ss_dssp -CCSCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEECGG--GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCS
T ss_pred ccceeEEEEEcCC--CcccHHHHHHHHHHHHHCCCEEEEEccHH--HHHHHHhcCCceeecCcccccchhhhhhhhhccc
Confidence 4567899988854 56777778899999999999999999753 23344555666665552
Q ss_pred --------------------------chhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHH
Q 004092 204 --------------------------GREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRAR 257 (774)
Q Consensus 204 --------------------------~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~ 257 (774)
...+...++..+||+|+++....... ++. ...++|+|++.|+........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~---~aa-~~~giP~v~~~~~~~~~~~~~ 168 (412)
T 3otg_A 93 SPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAG---LAA-LKAGIPTICHGVGRDTPDDLT 168 (412)
T ss_dssp CCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHH---HHH-HHHTCCEEEECCSCCCCSHHH
T ss_pred CCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHH---HHH-HHcCCCEEEecccccCchhhh
Confidence 02233445667999999886544222 222 245689999888632211110
Q ss_pred HhhhhhhhHHHHHHHHH----------HHhccEEEccCCc-chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHH
Q 004092 258 NYASSGQLELLNDWKKV----------FNRATVVVFPDYV-LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRV 326 (774)
Q Consensus 258 k~~~~~~~~li~~~~~~----------~~~a~~vv~ps~~-~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~ 326 (774)
..... .+...... ...++.+..+... .......+......+.+ .+.+. ... +.
T Consensus 169 ~~~~~----~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~----~~ 232 (412)
T 3otg_A 169 RSIEE----EVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRP-VPFAE-------QGD----LP 232 (412)
T ss_dssp HHHHH----HHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCC-CCCCC-------CCC----CC
T ss_pred HHHHH----HHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeec-cCCCC-------CCC----CC
Confidence 00000 01111111 0122222222211 11100000000000001 01000 000 00
Q ss_pred Hh--C-CCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCC-CCchHHHHHHHHHHc
Q 004092 327 KM--G-FKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDS-TSNYSVVIEAIAHNL 401 (774)
Q Consensus 327 ~l--g-l~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~-~e~Y~~~L~~la~~l 401 (774)
.+ . .+++..+++++| +.. . ++.+.+.+++..+.+. + +++++++ +.. .+.+.
T Consensus 233 ~~~~~~~~~~~~vlv~~G-~~~-~---~~~~~~~~~~~~l~~~--~-------~~~~~~~g~~~~~~~l~---------- 288 (412)
T 3otg_A 233 AWLSSRDTARPLVYLTLG-TSS-G---GTVEVLRAAIDGLAGL--D-------ADVLVASGPSLDVSGLG---------- 288 (412)
T ss_dssp GGGGGSCTTSCEEEEECT-TTT-C---SCHHHHHHHHHHHHTS--S-------SEEEEECCSSCCCTTCC----------
T ss_pred CccccccCCCCEEEEEcC-CCC-c---CcHHHHHHHHHHHHcC--C-------CEEEEEECCCCChhhhc----------
Confidence 11 1 233444556666 555 4 6666666666665543 2 5677766 332 32221
Q ss_pred CCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCC-
Q 004092 402 HYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKE- 476 (774)
Q Consensus 402 gL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~- 476 (774)
.+.+ +|.+.|++ ++.++|+.||++|.++ .+++++|||++|+|+|+++.++ ..+.+.++..|++++++
T Consensus 289 ~~~~-~v~~~~~~-~~~~~l~~ad~~v~~~------g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~ 360 (412)
T 3otg_A 289 EVPA-NVRLESWV-PQAALLPHVDLVVHHG------GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDN 360 (412)
T ss_dssp CCCT-TEEEESCC-CHHHHGGGCSEEEESC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGG
T ss_pred cCCC-cEEEeCCC-CHHHHHhcCcEEEECC------chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCccc
Confidence 3556 89999999 8999999999999765 3579999999999999977654 66778777789999987
Q ss_pred -CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004092 477 -NIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLEN 527 (774)
Q Consensus 477 -d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ 527 (774)
|+++|+++|.++++| ++.+++|++.+++.++.++++++++.+.+++..
T Consensus 361 ~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 361 ISPDSVSGAAKRLLAE---ESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 899999999999999 999999999999999889999999998888753
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.9e-18 Score=188.49 Aligned_cols=330 Identities=12% Similarity=0.110 Sum_probs=206.6
Q ss_pred CCCCCeEEEEecCCCCChHHHHHHHHHHHHHHc-CCeEEEEEcCCCc--chhhhhhcCcc-EEEccc-------------
Q 004092 141 GYRKPQLALVFPDLLIDPQQLQMVTIAIALREI-GYAIQVYSLEDGR--AHEVWRNIGVP-VAILQT------------- 203 (774)
Q Consensus 141 ~~rk~rialV~~~L~~GG~e~~v~~Lak~L~~~-G~eV~V~t~~~~~--~~~~~~~~gi~-i~~l~~------------- 203 (774)
..+++||++|++.-. .-..+..+.++|++. |+++.++..+..- ....++.+++. -+.+..
T Consensus 22 ~~~m~ki~~v~Gtr~---~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~ 98 (396)
T 3dzc_A 22 SNAMKKVLIVFGTRP---EAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSK 98 (396)
T ss_dssp --CCEEEEEEECSHH---HHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHH
T ss_pred hCCCCeEEEEEeccH---hHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHHHHH
Confidence 344578988887532 234557788999887 7888766554321 22233445552 122221
Q ss_pred -chhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHH-HHhccEE
Q 004092 204 -GREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKV-FNRATVV 281 (774)
Q Consensus 204 -~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~-~~~a~~v 281 (774)
...+.++++..+||+||++......+...+.+ ...++|++...++...+.. + ...... ..+.. ...++.+
T Consensus 99 ~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa-~~~~IPv~h~~ag~rs~~~---~-~~~~~~---~~r~~~~~~a~~~ 170 (396)
T 3dzc_A 99 ILLGMQQVLSSEQPDVVLVHGDTATTFAASLAA-YYQQIPVGHVEAGLRTGNI---Y-SPWPEE---GNRKLTAALTQYH 170 (396)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHH-HTTTCCEEEETCCCCCSCT---T-SSTTHH---HHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhcCCCEEEEECCchhHHHHHHHH-HHhCCCEEEEECCcccccc---c-cCCcHH---HHHHHHHHhcCEE
Confidence 12345567779999999998766323333333 4678997643332111100 0 000011 11121 2345655
Q ss_pred EccCCcc--hhhcccCCCCCEEEeCCCCCCcccccccC--c-hh-hHHHHHHhC-CCCCCEEEEEEeccc-ccccccccH
Q 004092 282 VFPDYVL--PMMYSAFDAGNYYVIPGSPAKAWEADTNM--D-LY-NDTVRVKMG-FKPDDLVIAIVGTQF-MYRGLWLEH 353 (774)
Q Consensus 282 v~ps~~~--~~i~~~v~~~ki~vIpg~gvd~~~~~~~~--~-~~-k~~lR~~lg-l~~~~~vIl~vGsrl-~~~KgiKg~ 353 (774)
.+++... .....+++.+++.++.+..+|...+.... . .. +..+++++| +++++.+++..|+|. ... |++
T Consensus 171 ~~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~---~~~ 247 (396)
T 3dzc_A 171 FAPTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFG---GGF 247 (396)
T ss_dssp EESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCT---THH
T ss_pred ECCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccch---hHH
Confidence 5565542 23345666778888875444532111100 0 00 256778888 466566666666564 344 678
Q ss_pred HHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcC
Q 004092 354 ALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGS 431 (774)
Q Consensus 354 ~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS 431 (774)
+.+++|+..+.+++|+ +++++.+|+. ....+.+++. ++..+ +|.++++. .++..+|+.||++|.+|
T Consensus 248 ~~ll~A~~~l~~~~~~-------~~~v~~~g~~-~~~~~~l~~~---~~~~~-~v~~~~~lg~~~~~~l~~~ad~vv~~S 315 (396)
T 3dzc_A 248 ERICQALITTAEQHPE-------CQILYPVHLN-PNVREPVNKL---LKGVS-NIVLIEPQQYLPFVYLMDRAHIILTDS 315 (396)
T ss_dssp HHHHHHHHHHHHHCTT-------EEEEEECCBC-HHHHHHHHHH---TTTCT-TEEEECCCCHHHHHHHHHHCSEEEESC
T ss_pred HHHHHHHHHHHHhCCC-------ceEEEEeCCC-hHHHHHHHHH---HcCCC-CEEEeCCCCHHHHHHHHHhcCEEEECC
Confidence 8999999999988888 9998875432 1223333332 34445 79998876 58889999999999998
Q ss_pred ccCcCCccHHHHHHHHcCCCEEEc-CCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 004092 432 FLEEQTFPEILVKALCFRKPIIAP-DLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRS 508 (774)
Q Consensus 432 ~~E~qGfp~~llEAMA~G~PVIat-d~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ 508 (774)
| + +.+|||++|+|||++ +.++.+|++.+|. +++++. |+++++++|.++++| ++.+++|++++..+
T Consensus 316 -----G-g-~~~EA~a~G~PvV~~~~~~~~~e~v~~G~-~~lv~~-d~~~l~~ai~~ll~d---~~~~~~m~~~~~~~ 381 (396)
T 3dzc_A 316 -----G-G-IQEEAPSLGKPVLVMRETTERPEAVAAGT-VKLVGT-NQQQICDALSLLLTD---PQAYQAMSQAHNPY 381 (396)
T ss_dssp -----S-G-GGTTGGGGTCCEEECCSSCSCHHHHHHTS-EEECTT-CHHHHHHHHHHHHHC---HHHHHHHHTSCCTT
T ss_pred -----c-c-HHHHHHHcCCCEEEccCCCcchHHHHcCc-eEEcCC-CHHHHHHHHHHHHcC---HHHHHHHhhccCCC
Confidence 3 3 338999999999998 7888889988874 788765 899999999999999 99999998765443
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=185.47 Aligned_cols=340 Identities=12% Similarity=0.062 Sum_probs=205.7
Q ss_pred CCCCeEEEEecCCCCChHHHHHHHHHHHHHHc--CCeEEEEEcCCC--cchhhhhhcCccE-EEccc-------------
Q 004092 142 YRKPQLALVFPDLLIDPQQLQMVTIAIALREI--GYAIQVYSLEDG--RAHEVWRNIGVPV-AILQT------------- 203 (774)
Q Consensus 142 ~rk~rialV~~~L~~GG~e~~v~~Lak~L~~~--G~eV~V~t~~~~--~~~~~~~~~gi~i-~~l~~------------- 203 (774)
++++||++|++.-. + -..+..+.++|++. |+++.++..+.. -....++.+++.. ..+..
T Consensus 25 m~~~kI~~v~Gtr~--~-~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~v~~~~~~~~~~~~~ 101 (403)
T 3ot5_A 25 MAKIKVMSIFGTRP--E-AIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKKGQTLAEITSR 101 (403)
T ss_dssp -CCEEEEEEECSHH--H-HHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEECCCCC-CCCHHHHHHH
T ss_pred cccceEEEEEecCh--h-HHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccccCCCCCCHHHHHHH
Confidence 44578999887532 2 33457788999987 688876665432 2223344555521 22221
Q ss_pred -chhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHH-HHhccEE
Q 004092 204 -GREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKV-FNRATVV 281 (774)
Q Consensus 204 -~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~-~~~a~~v 281 (774)
...+.++++..+||+|+++......+...+.+ ...++|++....+...+.. + ...... ..+.. -..++.+
T Consensus 102 ~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA-~~~~IPv~h~~aglrs~~~---~-~~~p~~---~~r~~~~~~a~~~ 173 (403)
T 3ot5_A 102 VMNGINEVIAAENPDIVLVHGDTTTSFAAGLAT-FYQQKMLGHVEAGLRTWNK---Y-SPFPEE---MNRQLTGVMADIH 173 (403)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHH-HHTTCEEEEESCCCCCSCT---T-SSTTHH---HHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHcCCCEEEEECCchhHHHHHHHH-HHhCCCEEEEECCcccccc---c-cCCcHH---HHHHHHHHhcCEE
Confidence 12345567779999999998765323333333 3567997643322101100 0 000011 11111 1234555
Q ss_pred EccCCc--chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEeccccc-ccccccHHHHHH
Q 004092 282 VFPDYV--LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMY-RGLWLEHALILR 358 (774)
Q Consensus 282 v~ps~~--~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~-~KgiKg~~lLLe 358 (774)
..++.. ......+++.+++.++.+.++|...+... ...+...++++ +++.+++..++|... + ++++.+++
T Consensus 174 ~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~-~~~~~~~~~~l---~~~~~vlv~~~r~~~~~---~~l~~ll~ 246 (403)
T 3ot5_A 174 FSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQ-KDYHHPILENL---GDNRLILMTAHRRENLG---EPMQGMFE 246 (403)
T ss_dssp EESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSC-TTCCCHHHHSC---TTCEEEEECCCCHHHHT---THHHHHHH
T ss_pred ECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhh-hhcchHHHHhc---cCCCEEEEEeCcccccC---cHHHHHHH
Confidence 555444 22344567777888887655554222111 11122344554 334455444546432 4 66889999
Q ss_pred HHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcC
Q 004092 359 ALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQ 436 (774)
Q Consensus 359 A~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~q 436 (774)
|+..+.+++|+ +++++.+|+.. ...+.+++. ++..+ +|.++++. .++..+|+.||++|.+|
T Consensus 247 a~~~l~~~~~~-------~~~v~~~~~~~-~~~~~l~~~---~~~~~-~v~l~~~l~~~~~~~l~~~ad~vv~~S----- 309 (403)
T 3ot5_A 247 AVREIVESRED-------TELVYPMHLNP-AVREKAMAI---LGGHE-RIHLIEPLDAIDFHNFLRKSYLVFTDS----- 309 (403)
T ss_dssp HHHHHHHHCTT-------EEEEEECCSCH-HHHHHHHHH---HTTCT-TEEEECCCCHHHHHHHHHHEEEEEECC-----
T ss_pred HHHHHHHhCCC-------ceEEEecCCCH-HHHHHHHHH---hCCCC-CEEEeCCCCHHHHHHHHHhcCEEEECC-----
Confidence 99999988888 99998865321 122333332 34444 79999987 48999999999999887
Q ss_pred CccHHHHHHHHcCCCEEEc-CCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHH
Q 004092 437 TFPEILVKALCFRKPIIAP-DLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMAL 515 (774)
Q Consensus 437 Gfp~~llEAMA~G~PVIat-d~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~ 515 (774)
|.+.+|||++|+|||++ +.++.+|.+.+| +|++++. |+++++++|.++++| ++.+++|++++..+......+
T Consensus 310 --Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~-d~~~l~~ai~~ll~~---~~~~~~m~~~~~~~g~~~aa~ 382 (403)
T 3ot5_A 310 --GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGT-NKENLIKEALDLLDN---KESHDKMAQAANPYGDGFAAN 382 (403)
T ss_dssp --HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCS-CHHHHHHHHHHHHHC---HHHHHHHHHSCCTTCCSCHHH
T ss_pred --ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCC-CHHHHHHHHHHHHcC---HHHHHHHHhhcCcccCCcHHH
Confidence 22338999999999998 778888888776 7998876 899999999999999 999999987655443334444
Q ss_pred HHHHHHHH
Q 004092 516 ETIEGYAM 523 (774)
Q Consensus 516 ~~a~~y~~ 523 (774)
++++...+
T Consensus 383 rI~~~l~~ 390 (403)
T 3ot5_A 383 RILAAIKS 390 (403)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45444433
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-15 Score=167.41 Aligned_cols=162 Identities=13% Similarity=0.082 Sum_probs=117.2
Q ss_pred CCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEE-EEEe-CCCCCchHHHHHHHHHHcCCCCccEEE
Q 004092 333 DDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKV-MILS-GDSTSNYSVVIEAIAHNLHYPLGVVKH 410 (774)
Q Consensus 333 ~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~L-vIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~f 410 (774)
+.++++++| +.. .++.+.+..+++++..+ ++ +++ +++| |+..+. + + .+++ +|.+
T Consensus 232 ~~~v~v~~G-s~~-~~~~~~~~~~~~~l~~~----~~-------~~~~~~~G~~~~~~~----l----~--~~~~-~v~~ 287 (430)
T 2iyf_A 232 EKVVLVSLG-SAF-TKQPAFYRECVRAFGNL----PG-------WHLVLQIGRKVTPAE----L----G--ELPD-NVEV 287 (430)
T ss_dssp SEEEEEECT-TTC-C-CHHHHHHHHHHHTTC----TT-------EEEEEECC---CGGG----G----C--SCCT-TEEE
T ss_pred CCeEEEEcC-CCC-CCcHHHHHHHHHHHhcC----CC-------eEEEEEeCCCCChHH----h----c--cCCC-CeEE
Confidence 445677778 554 32223344444444322 33 677 4667 554321 1 1 3555 8999
Q ss_pred ccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCC--CHHHHHHH
Q 004092 411 MAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKE--NIKALTHI 484 (774)
Q Consensus 411 lG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~--d~e~La~a 484 (774)
.|+.++. ++|+.||++|..+ | .++++|||++|+|+|+++.++ ..+.+.+...|++++.+ |+++|+++
T Consensus 288 ~~~~~~~-~~l~~ad~~v~~~-----G-~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~ 360 (430)
T 2iyf_A 288 HDWVPQL-AILRQADLFVTHA-----G-AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRET 360 (430)
T ss_dssp ESSCCHH-HHHTTCSEEEECC-----C-HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHH
T ss_pred EecCCHH-HHhhccCEEEECC-----C-ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHH
Confidence 9999777 8999999999864 3 479999999999999998765 35566666779999876 89999999
Q ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 004092 485 ILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENV 528 (774)
Q Consensus 485 I~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~l 528 (774)
|.++++| ++.++++++.+++..+..+++++++.+.+++++.
T Consensus 361 i~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 401 (430)
T 2iyf_A 361 ALALVDD---PEVARRLRRIQAEMAQEGGTRRAADLIEAELPAR 401 (430)
T ss_dssp HHHHHHC---HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC-
T ss_pred HHHHHcC---HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhcc
Confidence 9999999 9999999999998887788888888877766543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-16 Score=174.17 Aligned_cols=321 Identities=10% Similarity=0.033 Sum_probs=181.8
Q ss_pred CCCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc------------------
Q 004092 143 RKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG------------------ 204 (774)
Q Consensus 143 rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~------------------ 204 (774)
.++||+++... ..|....+..|+++|.++||+|.|++... ........|+++..+...
T Consensus 14 ~~MrIl~~~~~--~~gh~~~~~~La~~L~~~GheV~v~~~~~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 4fzr_A 14 SHMRILVIAGC--SEGFVMPLVPLSWALRAAGHEVLVAASEN--MGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTM 89 (398)
T ss_dssp -CCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEEEGG--GHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCC
T ss_pred CceEEEEEcCC--CcchHHHHHHHHHHHHHCCCEEEEEcCHH--HHHHHHhCCCeeEecCCccchHhhhhhhccCccccc
Confidence 45789888764 45666778899999999999999998632 333444556555444310
Q ss_pred -----------------------hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhh
Q 004092 205 -----------------------REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYAS 261 (774)
Q Consensus 205 -----------------------~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~ 261 (774)
..+...++..+||+||+++....+.+.. . ..++|+|.+.|+............
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a---~-~~giP~v~~~~~~~~~~~~~~~~~ 165 (398)
T 4fzr_A 90 PREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVA---A-TLGIPWIEQSIRLASPELIKSAGV 165 (398)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHH---H-HHTCCEEEECCSSCCCHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHH---H-hhCCCEEEeccCCCCchhhhHHHH
Confidence 1233445668999999875433222222 1 345899998887322211111110
Q ss_pred hhhhHHHHHHHHHHHhc-----cEEEccCCcchhhcccCCCCCEEEeCCCCCCcccccccC--chhhHHHHHHhCCCCCC
Q 004092 262 SGQLELLNDWKKVFNRA-----TVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNM--DLYNDTVRVKMGFKPDD 334 (774)
Q Consensus 262 ~~~~~li~~~~~~~~~a-----~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~--~~~k~~lR~~lgl~~~~ 334 (774)
..... ....+... +..... ....+.... +.+.+...+..+. ........ ...+++.
T Consensus 166 ~~l~~----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 228 (398)
T 4fzr_A 166 GELAP----ELAELGLTDFPDPLLSIDV------CPPSMEAQP-----KPGTTKMRYVPYNGRNDQVPSWV--FEERKQP 228 (398)
T ss_dssp HHTHH----HHHTTTCSSCCCCSEEEEC------SCGGGC---------CCCEECCCCCCCCSSCCCCHHH--HSCCSSC
T ss_pred HHHHH----HHHHcCCCCCCCCCeEEEe------CChhhCCCC-----CCCCCCeeeeCCCCCCCCCchhh--hcCCCCC
Confidence 10011 00001100 111110 001111000 0000000000000 00000001 1123456
Q ss_pred EEEEEEeccccccc-------ccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCc
Q 004092 335 LVIAIVGTQFMYRG-------LWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLG 406 (774)
Q Consensus 335 ~vIl~vGsrl~~~K-------giKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~ 406 (774)
.+++++| +....+ +.+.+..+++|+..+ + ++++++| ++.. +.++ .+.+
T Consensus 229 ~v~v~~G-~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~-------~~~v~~~~~~~~----~~l~------~~~~- 284 (398)
T 4fzr_A 229 RLCLTFG-TRVPLPNTNTIPGGLSLLQALSQELPKL-----G-------FEVVVAVSDKLA----QTLQ------PLPE- 284 (398)
T ss_dssp EEECC-----------------CCSHHHHHHHGGGG-----T-------CEEEECCCC------------------CCT-
T ss_pred EEEEEcc-CcccccccccccchHHHHHHHHHHHHhC-----C-------CEEEEEeCCcch----hhhc------cCCC-
Confidence 6777788 554433 346677777777654 2 6888888 4332 2221 3566
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCC----cccccccccCccEEEEcCC--CHHH
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDL----SNIRKYVDDRVNGYLFPKE--NIKA 480 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~----ggi~EiV~dg~~G~Lv~~~--d~e~ 480 (774)
+|.+.|+. ++..++..||++|.. |.+++++|||++|+|+|+.+. .+..+.+.+...|++++++ |+++
T Consensus 285 ~v~~~~~~-~~~~ll~~ad~~v~~------gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~ 357 (398)
T 4fzr_A 285 GVLAAGQF-PLSAIMPACDVVVHH------GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVES 357 (398)
T ss_dssp TEEEESCC-CHHHHGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------C
T ss_pred cEEEeCcC-CHHHHHhhCCEEEec------CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHH
Confidence 89999998 689999999999954 347899999999999999554 4666778788889999876 7899
Q ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 004092 481 LTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYA 522 (774)
Q Consensus 481 La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~ 522 (774)
|+++|.++++| ++.+++|++.+++.....+++++++.++
T Consensus 358 l~~ai~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 358 VLAACARIRDD---SSYVGNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp HHHHHHHHHHC---THHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred HHHHHHHHHhC---HHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 99999999999 9999999999999888889988887654
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.2e-16 Score=171.00 Aligned_cols=325 Identities=13% Similarity=0.101 Sum_probs=191.7
Q ss_pred CCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEc-cc-------------------
Q 004092 144 KPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAIL-QT------------------- 203 (774)
Q Consensus 144 k~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l-~~------------------- 203 (774)
++||+++... .+|....+..++++|.++||+|.+++... ........|+++..+ ..
T Consensus 1 ~MrIl~~~~~--~~gh~~~~~~la~~L~~~GheV~v~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (391)
T 3tsa_A 1 HMRVLVVPLP--YPTHLMAMVPLCWALQASGHEVLIAAPPE--LQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAF 76 (391)
T ss_dssp CCEEEEECCS--CHHHHHTTHHHHHHHHHTTCEEEEEECHH--HHHHHHHBTCEEEEC--------------CCSCCGGG
T ss_pred CcEEEEEcCC--CcchhhhHHHHHHHHHHCCCEEEEecChh--hHHHHHhCCCceeeecCCccchhhhhhhccccccccc
Confidence 3688888765 56777778899999999999999998532 223334455554444 11
Q ss_pred --------------------------chhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhh-H
Q 004092 204 --------------------------GREKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATR-A 256 (774)
Q Consensus 204 --------------------------~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~-~ 256 (774)
...+..+++..+||+||+++... ...+.. ...++|++.+.|+...... .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~---~~~~aa-~~~giP~v~~~~~~~~~~~~~ 152 (391)
T 3tsa_A 77 GQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCAL---IGRVLG-GLLDLPVVLHRWGVDPTAGPF 152 (391)
T ss_dssp GCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCH---HHHHHH-HHTTCCEEEECCSCCCTTTHH
T ss_pred ccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchh---HHHHHH-HHhCCCEEEEecCCccccccc
Confidence 22334556678999999985433 222232 2467999998886322211 0
Q ss_pred HHhhhhhhhHHHHHHHHHHHhc-----cEEEccCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCC
Q 004092 257 RNYASSGQLELLNDWKKVFNRA-----TVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFK 331 (774)
Q Consensus 257 ~k~~~~~~~~li~~~~~~~~~a-----~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~ 331 (774)
...... . +......+... +....................+..+|..+ . ... .......
T Consensus 153 ~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~---~~~--------~~~~~~~ 215 (391)
T 3tsa_A 153 SDRAHE---L-LDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYVPYNG--S---GAF--------PAWGAAR 215 (391)
T ss_dssp HHHHHH---H-HHHHHHHTTSSSSCCCSEEEECSCGGGSCTTSCCCEECCCCCCCC--C---EEC--------CGGGSSC
T ss_pred cchHHH---H-HHHHHHHcCCCCCCCCceEEEecChhhcCCCCCccCCeeeecCCC--C---cCC--------CchhhcC
Confidence 000000 0 11111111111 11111100000000000000001111000 0 000 0111122
Q ss_pred C-CCEEEEEEecccccccccccH-HHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccE
Q 004092 332 P-DDLVIAIVGTQFMYRGLWLEH-ALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVV 408 (774)
Q Consensus 332 ~-~~~vIl~vGsrl~~~KgiKg~-~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V 408 (774)
+ +..+++++| +.... ++. ..+++++... .+.|+ ++++++| ++..+... ++.+ +|
T Consensus 216 ~~~~~vlv~~G-~~~~~---~~~~~~~~~~~~~~-~~~p~-------~~~v~~~~~~~~~~l~----------~~~~-~v 272 (391)
T 3tsa_A 216 TSARRVCICMG-RMVLN---ATGPAPLLRAVAAA-TELPG-------VEAVIAVPPEHRALLT----------DLPD-NA 272 (391)
T ss_dssp CSSEEEEEECC-HHHHH---HHCSHHHHHHHHHH-HTSTT-------EEEEEECCGGGGGGCT----------TCCT-TE
T ss_pred CCCCEEEEEcC-CCCCc---ccchHHHHHHHHHh-ccCCC-------eEEEEEECCcchhhcc----------cCCC-CE
Confidence 3 344555567 54332 333 5557777666 66667 8999998 43321111 4555 89
Q ss_pred EEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCC----cccccccccCccEEEEcC----CCHHH
Q 004092 409 KHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDL----SNIRKYVDDRVNGYLFPK----ENIKA 480 (774)
Q Consensus 409 ~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~----ggi~EiV~dg~~G~Lv~~----~d~e~ 480 (774)
.+.|+. +...++..||++|.. |.+++++|||++|+|+|+.+. .+..+.+.+...|.++++ .|+++
T Consensus 273 ~~~~~~-~~~~ll~~ad~~v~~------~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~ 345 (391)
T 3tsa_A 273 RIAESV-PLNLFLRTCELVICA------GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQ 345 (391)
T ss_dssp EECCSC-CGGGTGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHH
T ss_pred EEeccC-CHHHHHhhCCEEEeC------CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHH
Confidence 999987 445677999999964 345789999999999999544 445667777778999987 78999
Q ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004092 481 LTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLE 526 (774)
Q Consensus 481 La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e 526 (774)
|+++|.++++| ++.+++|++.+++......++++++.+.+++.
T Consensus 346 l~~ai~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 346 FTDSIATVLGD---TGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHHHTC---THHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred HHHHHHHHHcC---HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 99999999999 99999999999988888899888887766543
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.5e-15 Score=164.30 Aligned_cols=324 Identities=11% Similarity=0.031 Sum_probs=190.3
Q ss_pred CCCCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc-----------------
Q 004092 142 YRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG----------------- 204 (774)
Q Consensus 142 ~rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~----------------- 204 (774)
.+.+||+++... .+|....+..|+++|.++||+|.|++. .........|+++..+...
T Consensus 18 ~~~MrIl~~~~~--~~Ghv~~~~~La~~L~~~GheV~v~~~---~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 18 GRHMRVLFVSSP--GIGHLFPLIQLAWGFRTAGHDVLIAVA---EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp -CCCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEES---SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hhcCEEEEEcCC--CcchHhHHHHHHHHHHHCCCEEEEecc---chHHHHHhCCCeeEecCCccCHHHHhhhcccCCccc
Confidence 345799998864 556677789999999999999999997 3333444556555544321
Q ss_pred ---------------------------hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHH
Q 004092 205 ---------------------------REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRAR 257 (774)
Q Consensus 205 ---------------------------~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~ 257 (774)
..+...++..+||+|+++.....+. +++ ...++|+|.+.++........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~---~aA-~~~giP~v~~~~~~~~~~~~~ 168 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGL---LAA-DRAGVPAVQRNQSAWRTRGMH 168 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHH---HHH-HHHTCCEEEECCTTCCCTTHH
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHH---HHH-HHcCCCEEEEeccCCCccchh
Confidence 1234445668999999864433212 222 245689998887632211111
Q ss_pred HhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhC-CCCCCEE
Q 004092 258 NYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMG-FKPDDLV 336 (774)
Q Consensus 258 k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lg-l~~~~~v 336 (774)
.............+............+...............+.++|..+.. ... ..+. .+++..+
T Consensus 169 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--------~~~~~~~~~~~v 235 (398)
T 3oti_A 169 RSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLEAEPEGWFMRWVPYGGGA-----VLG--------DRLPPVPARPEV 235 (398)
T ss_dssp HHHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTTSCCCSBCCCCCCCCCCE-----ECC--------SSCCCCCSSCEE
T ss_pred hHHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCCCCCCCCccccCCCCCc-----CCc--------hhhhcCCCCCEE
Confidence 1111111111110000000001111111110000000000011112210100 000 0111 1234556
Q ss_pred EEEEecccccc-cccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc
Q 004092 337 IAIVGTQFMYR-GLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE 414 (774)
Q Consensus 337 Il~vGsrl~~~-KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~ 414 (774)
++++| +.... ++.+.+..+++++..+ + ++++++| ++..+... .+++ +|.+.|+.
T Consensus 236 ~v~~G-~~~~~~~~~~~~~~~~~~l~~~-----~-------~~~v~~~g~~~~~~l~----------~~~~-~v~~~~~~ 291 (398)
T 3oti_A 236 AITMG-TIELQAFGIGAVEPIIAAAGEV-----D-------ADFVLALGDLDISPLG----------TLPR-NVRAVGWT 291 (398)
T ss_dssp EECCT-TTHHHHHCGGGHHHHHHHHHTS-----S-------SEEEEECTTSCCGGGC----------SCCT-TEEEESSC
T ss_pred EEEcC-CCccccCcHHHHHHHHHHHHcC-----C-------CEEEEEECCcChhhhc----------cCCC-cEEEEccC
Confidence 67777 55332 2335565666666543 2 6888888 44332111 4566 89999999
Q ss_pred ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEE----cCCcccc--cccccCccEEEEcCC--CHHHHHHHHH
Q 004092 415 GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIA----PDLSNIR--KYVDDRVNGYLFPKE--NIKALTHIIL 486 (774)
Q Consensus 415 ~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIa----td~ggi~--EiV~dg~~G~Lv~~~--d~e~La~aI~ 486 (774)
++.++|..||++|.. |.+++++|||++|+|+|+ .+..+.. +.+.+...|++++++ +++.++
T Consensus 292 -~~~~ll~~ad~~v~~------~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~---- 360 (398)
T 3oti_A 292 -PLHTLLRTCTAVVHH------GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR---- 360 (398)
T ss_dssp -CHHHHHTTCSEEEEC------CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----
T ss_pred -CHHHHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----
Confidence 899999999999964 346789999999999999 4556777 888887889999875 566665
Q ss_pred HHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 004092 487 QVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLL 525 (774)
Q Consensus 487 ~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~ 525 (774)
++++| +..+++|++.+++......++++++.+.+++
T Consensus 361 ~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 361 RLIGD---ESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp HHHHC---HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHcC---HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 88899 9999999999999888899999998877664
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.5e-15 Score=161.75 Aligned_cols=303 Identities=11% Similarity=0.002 Sum_probs=193.5
Q ss_pred ccCCCCCCCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCC--cchhhhhhcCccEEEcccchhHHHHh-hh
Q 004092 137 LHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDG--RAHEVWRNIGVPVAILQTGREKASFV-NW 213 (774)
Q Consensus 137 ~~r~~~rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~--~~~~~~~~~gi~i~~l~~~~~l~~~i-~~ 213 (774)
+.|-+.|+.-|.-..+.-...++...-....+.+.+.|++-.-+...+. +..... .+.+...+ ..
T Consensus 5 ~~~~~~m~~~i~~~~~~~~~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 72 (339)
T 3rhz_A 5 LRRQACMRVYITNINGQSIQSTAQLCQNTVTDVAVSLGYRELGIYCYQIHTDSESEL------------SKRLDGIVAGL 72 (339)
T ss_dssp -----CCCEEEEEEESSCTTCHHHHHHHHHHHHHHHTTCEEEEEECCCGGGSCHHHH------------HHHHHHHTTTC
T ss_pred HHHHhhhheeeecccCccccchHHHHHHHHHHHHHHCCCeEEEeeccccccccHHHH------------HHHHHHHHhcC
Confidence 3455677777777777666778888888889999999997655543221 111110 01111222 24
Q ss_pred cCccEEEEcCCchhH-HH-HHHHhC-CCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcch-
Q 004092 214 LNYDGILVNSLEAKV-VI-SNIMQE-PFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLP- 289 (774)
Q Consensus 214 ~~~DIIhvhs~~~~~-~l-~~Ll~~-~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~- 289 (774)
.++|+|++++|.... .+ ..++.. +..++|+|+.+|+-.... . ... ..+.......++.++.+++++....
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~-~---~~~--~~~~~~E~~~y~~aD~Ii~~S~~~~~ 146 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLM-F---SGN--FYLMDRTIAYYNKADVVVAPSQKMID 146 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHH-C---GGG--GGGHHHHHHHHTTCSEEEESCHHHHH
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhh-C---ccc--hhhHHHHHHHHHHCCEEEECCHHHHH
Confidence 679999999987421 12 222221 234899999999732111 0 111 1122244557889999988877632
Q ss_pred -hhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcc
Q 004092 290 -MMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVS 368 (774)
Q Consensus 290 -~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p 368 (774)
+...+++..++.+++.. +.. .... ...+.++++++|+| ++... .. ++ .+ .+
T Consensus 147 ~l~~~G~~~~ki~~~~~~--~~~--~~~~----------~~~~~~~~~i~yaG-~l~k~---~~----L~---~l---~~ 198 (339)
T 3rhz_A 147 KLRDFGMNVSKTVVQGMW--DHP--TQAP----------MFPAGLKREIHFPG-NPERF---SF----VK---EW---KY 198 (339)
T ss_dssp HHHHTTCCCSEEEECCSC--CCC--CCCC----------CCCCEEEEEEEECS-CTTTC---GG----GG---GC---CC
T ss_pred HHHHcCCCcCceeecCCC--Ccc--Cccc----------ccccCCCcEEEEeC-Ccchh---hH----HH---hC---CC
Confidence 23445655666554421 110 0000 01233457899999 66642 11 12 12 24
Q ss_pred cCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcC-c-----cCcCCcc
Q 004092 369 VENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGS-F-----LEEQTFP 439 (774)
Q Consensus 369 ~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS-~-----~E~qGfp 439 (774)
+ ++|+|+| |+.. .++ +|.|+|++ ++++.+|+.+|+.+.+. . ... .+|
T Consensus 199 ~-------~~f~ivG~G~~~--------------~l~--nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~-~~P 254 (339)
T 3rhz_A 199 D-------IPLKVYTWQNVE--------------LPQ--NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSL-YCS 254 (339)
T ss_dssp S-------SCEEEEESCCCC--------------CCT--TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTT-CCC
T ss_pred C-------CeEEEEeCCccc--------------CcC--CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHh-cCh
Confidence 5 9999999 8764 233 59999977 89999999888887751 1 111 469
Q ss_pred HHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHH
Q 004092 440 EILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALE 516 (774)
Q Consensus 440 ~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~ 516 (774)
.++.||||||+|||+++.++..++|.++.+|++++ +.++++++|..+. ++.+++|+++|++.++++++..
T Consensus 255 ~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l~-----~~~~~~m~~na~~~a~~~~~~~ 324 (339)
T 3rhz_A 255 YKLGSFLAAGIPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNVN-----EDEYIELVKNVRSFNPILRKGF 324 (339)
T ss_dssp HHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHCC-----HHHHHHHHHHHHHHTHHHHTTH
T ss_pred HHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHhhccH
Confidence 99999999999999999999999999999999997 6899999998863 4578899999998876554433
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.3e-14 Score=154.87 Aligned_cols=115 Identities=13% Similarity=0.099 Sum_probs=96.8
Q ss_pred CCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCC-----cccccccccCccEEEEcCC-
Q 004092 403 YPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDL-----SNIRKYVDDRVNGYLFPKE- 476 (774)
Q Consensus 403 L~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~-----ggi~EiV~dg~~G~Lv~~~- 476 (774)
+.+ +|.+.|+.++. ++|+.||++|..+ | ..+++|||++|+|+|+.+. .+..+.+.+...|..++.+
T Consensus 279 ~~~-~v~~~~~~~~~-~ll~~ad~~v~~~-----G-~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~ 350 (402)
T 3ia7_A 279 LPP-NVEAHQWIPFH-SVLAHARACLTHG-----T-TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQ 350 (402)
T ss_dssp CCT-TEEEESCCCHH-HHHTTEEEEEECC-----C-HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGG
T ss_pred CCC-cEEEecCCCHH-HHHhhCCEEEECC-----C-HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCC
Confidence 555 89999999777 9999999999765 2 4688999999999996554 3566777777789998876
Q ss_pred -CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 004092 477 -NIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENV 528 (774)
Q Consensus 477 -d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~l 528 (774)
++++++++|.++++| ++.++++++.+++......++.+++...+++.+.
T Consensus 351 ~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 400 (402)
T 3ia7_A 351 LEPASIREAVERLAAD---SAVRERVRRMQRDILSSGGPARAADEVEAYLGRV 400 (402)
T ss_dssp CSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhc
Confidence 899999999999999 9999999998888887788889998888887653
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.1e-13 Score=148.23 Aligned_cols=332 Identities=14% Similarity=0.069 Sum_probs=188.1
Q ss_pred CCCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc------------------
Q 004092 143 RKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG------------------ 204 (774)
Q Consensus 143 rk~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~------------------ 204 (774)
+++||+++... ..|--..+..|++.|.++||+|++++... ........|+++..+...
T Consensus 19 ~m~rIl~~~~~--~~GHv~p~l~La~~L~~~Gh~V~v~~~~~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
T 3rsc_A 19 HMAHLLIVNVA--SHGLILPTLTVVTELVRRGHRVSYVTAGG--FAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVR 94 (415)
T ss_dssp CCCEEEEECCS--CHHHHGGGHHHHHHHHHTTCEEEEEECGG--GHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHH
T ss_pred cCCEEEEEeCC--CccccccHHHHHHHHHHCCCEEEEEeCHH--HHHHHHhcCCEEEeccccccccccchhhccccHHHH
Confidence 45788877653 45667788999999999999999999432 333445556666554421
Q ss_pred -------------hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhh--h----hHHHhh-----
Q 004092 205 -------------REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLA--T----RARNYA----- 260 (774)
Q Consensus 205 -------------~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~--~----~~~k~~----- 260 (774)
..+...++..+||+|++++... ....++++ ..++|++.+.|+.... + ......
T Consensus 95 ~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~--~~~~~aA~-~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~p 171 (415)
T 3rsc_A 95 PHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPF--IAGQLLAA-RWRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDP 171 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTH--HHHHHHHH-HTTCCEEEEESSCCCCSSCCHHHHHHHHHTCCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhh--hHHHHHHH-HhCCCEEEEEecccccCccccccccccccccCCh
Confidence 1223345568999999874333 22233332 4679999988752110 0 000000
Q ss_pred --hhhhhHHHHHHHHHHHh----------c-cEEEccCCc-chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHH
Q 004092 261 --SSGQLELLNDWKKVFNR----------A-TVVVFPDYV-LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRV 326 (774)
Q Consensus 261 --~~~~~~li~~~~~~~~~----------a-~~vv~ps~~-~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~ 326 (774)
.......+......+.. . +........ ........ ..++.++. ...... ......
T Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~vG-p~~~~~--~~~~~~------- 240 (415)
T 3rsc_A 172 LDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTF-DDRFVFVG-PCFDDR--RFLGEW------- 240 (415)
T ss_dssp GGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGC-CTTEEECC-CCCCCC--GGGCCC-------
T ss_pred hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccC-CCceEEeC-CCCCCc--ccCcCc-------
Confidence 00000001111111100 0 111111111 11101111 12333331 111100 000000
Q ss_pred HhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEE-e-CCCCCchHHHHHHHHHHcCCC
Q 004092 327 KMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMIL-S-GDSTSNYSVVIEAIAHNLHYP 404 (774)
Q Consensus 327 ~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIv-G-G~~~e~Y~~~L~~la~~lgL~ 404 (774)
....++...+++++|+. ... ..+.+..+++++..+ + ++++++ | +...+... .+.
T Consensus 241 ~~~~~~~~~v~v~~Gs~-~~~-~~~~~~~~~~al~~~----~--------~~~v~~~g~~~~~~~l~----------~~~ 296 (415)
T 3rsc_A 241 TRPADDLPVVLVSLGTT-FND-RPGFFRDCARAFDGQ----P--------WHVVMTLGGQVDPAALG----------DLP 296 (415)
T ss_dssp CCCSSCCCEEEEECTTT-SCC-CHHHHHHHHHHHTTS----S--------CEEEEECTTTSCGGGGC----------CCC
T ss_pred cccCCCCCEEEEECCCC-CCC-hHHHHHHHHHHHhcC----C--------cEEEEEeCCCCChHHhc----------CCC
Confidence 00123445566677744 332 012244444444322 1 566664 4 33321111 455
Q ss_pred CccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCc----ccccccccCccEEEEcCC--CH
Q 004092 405 LGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLS----NIRKYVDDRVNGYLFPKE--NI 478 (774)
Q Consensus 405 ~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g----gi~EiV~dg~~G~Lv~~~--d~ 478 (774)
+ +|.+.++.++. .+|..||++|..+ | ..+++|||++|+|+|+.+.. ...+.+.+...|..++.+ ++
T Consensus 297 ~-~v~~~~~~~~~-~ll~~ad~~v~~~-----G-~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~ 368 (415)
T 3rsc_A 297 P-NVEAHRWVPHV-KVLEQATVCVTHG-----G-MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADG 368 (415)
T ss_dssp T-TEEEESCCCHH-HHHHHEEEEEESC-----C-HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCH
T ss_pred C-cEEEEecCCHH-HHHhhCCEEEECC-----c-HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCH
Confidence 5 89999999776 9999999999765 2 46889999999999995543 355666666679888765 89
Q ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 004092 479 KALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLEN 527 (774)
Q Consensus 479 e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ 527 (774)
++++++|.++++| ++.++++++.+.+.......+.+++...+++..
T Consensus 369 ~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 369 DTLLAAVGAVAAD---PALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp HHHHHHHHHHHTC---HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC---HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 9999999999999 999999998888888778888888887777653
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.53 E-value=9.3e-13 Score=144.71 Aligned_cols=161 Identities=11% Similarity=0.088 Sum_probs=118.4
Q ss_pred CCCEEEEEEecccccc---c-ccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCcc
Q 004092 332 PDDLVIAIVGTQFMYR---G-LWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGV 407 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~---K-giKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~ 407 (774)
++..+++++| +.... | +.+.+..+++|+..+ + +++++++|... .+.++ ++++ +
T Consensus 209 ~~~~v~v~~G-s~~~~~~~~~~~~~~~~~~~al~~~-----~-------~~~~~~~g~~~---~~~l~------~~~~-~ 265 (384)
T 2p6p_A 209 TRQRVLVTSG-SRVAKESYDRNFDFLRGLAKDLVRW-----D-------VELIVAAPDTV---AEALR------AEVP-Q 265 (384)
T ss_dssp SSCEEEEECS-SSSSCCSSCCCCTTHHHHHHHHHTT-----T-------CEEEEECCHHH---HHHHH------HHCT-T
T ss_pred CCCEEEEECC-CCCccccccccHHHHHHHHHHHhcC-----C-------cEEEEEeCCCC---HHhhC------CCCC-c
Confidence 3455777777 55543 2 346777888888754 2 68888764211 12222 2355 7
Q ss_pred EEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCC--CHHHH
Q 004092 408 VKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKE--NIKAL 481 (774)
Q Consensus 408 V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~--d~e~L 481 (774)
|.+ |+. +..++|..||++|..+ .+++++|||++|+|+|+.+..+ ..+.+.+...|++++++ +++++
T Consensus 266 v~~-~~~-~~~~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l 337 (384)
T 2p6p_A 266 ARV-GWT-PLDVVAPTCDLLVHHA------GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAI 337 (384)
T ss_dssp SEE-ECC-CHHHHGGGCSEEEECS------CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHH
T ss_pred eEE-cCC-CHHHHHhhCCEEEeCC------cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHH
Confidence 899 988 4688999999999864 3568999999999999998754 55666666679998864 79999
Q ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004092 482 THIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLE 526 (774)
Q Consensus 482 a~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e 526 (774)
+++|.++++| ++.++++++.+.+....-..+++++...+++.
T Consensus 338 ~~~i~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 338 ADSCQELQAK---DTYARRAQDLSREISGMPLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHC---HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC---HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhh
Confidence 9999999999 99888998888887766677777777666654
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.6e-11 Score=137.91 Aligned_cols=161 Identities=11% Similarity=0.018 Sum_probs=116.4
Q ss_pred CCEEEEEEecccccc-cccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeC-CCCCchHHHHHHHHHHcCCCCccEEE
Q 004092 333 DDLVIAIVGTQFMYR-GLWLEHALILRALLPLFSEVSVENESNSPIKVMILSG-DSTSNYSVVIEAIAHNLHYPLGVVKH 410 (774)
Q Consensus 333 ~~~vIl~vGsrl~~~-KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG-~~~e~Y~~~L~~la~~lgL~~~~V~f 410 (774)
...+++++|+..... ...+.+..+++|+..+ + +++++++| +..+... ++++ +|.+
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~-------~~~v~~~g~~~~~~l~----------~~~~-~v~~ 323 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGDV-----D-------AEIIATFDAQQLEGVA----------NIPD-NVRT 323 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHTS-----S-------SEEEECCCTTTTSSCS----------SCCS-SEEE
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHcC-----C-------CEEEEEECCcchhhhc----------cCCC-CEEE
Confidence 345667777433210 1226666778888764 2 67777774 3322111 4555 8999
Q ss_pred ccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCC--CHHHHHHH
Q 004092 411 MAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKE--NIKALTHI 484 (774)
Q Consensus 411 lG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~--d~e~La~a 484 (774)
.+++++ .++|..||++|.. |-+++++|||++|+|+|+.+..+ ..+.+.+...|++++.+ ++++++++
T Consensus 324 ~~~~~~-~~ll~~ad~~V~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~ 396 (441)
T 2yjn_A 324 VGFVPM-HALLPTCAATVHH------GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRES 396 (441)
T ss_dssp CCSCCH-HHHGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHH
T ss_pred ecCCCH-HHHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHH
Confidence 999976 7889999999974 34679999999999999998853 45566666679998875 89999999
Q ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004092 485 ILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLE 526 (774)
Q Consensus 485 I~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e 526 (774)
|.++++| ++.++++++.+++.......+++++...+++.
T Consensus 397 i~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 397 VKRVLDD---PAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHC---HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHhcC---HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999 99999999988888777788888877766653
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=145.01 Aligned_cols=338 Identities=8% Similarity=0.047 Sum_probs=197.2
Q ss_pred CCeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCC---cchh-hhhhcCcc--EEEccc------------ch
Q 004092 144 KPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDG---RAHE-VWRNIGVP--VAILQT------------GR 205 (774)
Q Consensus 144 k~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~---~~~~-~~~~~gi~--i~~l~~------------~~ 205 (774)
..++++|++. =..-.-+.-+.+.|++. +++.++..+.- .... ..+.++++ -+.+.. ..
T Consensus 9 ~~~~~~v~Gt---Rpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~ 84 (385)
T 4hwg_A 9 MLKVMTIVGT---RPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVAADNTAKSIGLVIE 84 (385)
T ss_dssp CCEEEEEECS---HHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCCCCCSEECCCCCCCSHHHHHHHHH
T ss_pred hhheeEEEEc---CHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCCCCCceecCCCCCCHHHHHHHHHH
Confidence 3556666652 22233456677778776 88777765431 1222 22445552 222221 12
Q ss_pred hHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHH-HhccEEEcc
Q 004092 206 EKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVF-NRATVVVFP 284 (774)
Q Consensus 206 ~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~-~~a~~vv~p 284 (774)
.+.++++..+||+|+++..... .++.+.+ ...++|++ ++++..-. ... .... ..++... ..++.+..+
T Consensus 85 ~l~~~l~~~kPD~Vlv~gd~~~-~~aalaA-~~~~IPv~-h~eaglrs--~~~---~~pe---e~nR~~~~~~a~~~~~~ 153 (385)
T 4hwg_A 85 KVDEVLEKEKPDAVLFYGDTNS-CLSAIAA-KRRKIPIF-HMEAGNRC--FDQ---RVPE---EINRKIIDHISDVNITL 153 (385)
T ss_dssp HHHHHHHHHCCSEEEEESCSGG-GGGHHHH-HHTTCCEE-EESCCCCC--SCT---TSTH---HHHHHHHHHHCSEEEES
T ss_pred HHHHHHHhcCCcEEEEECCchH-HHHHHHH-HHhCCCEE-EEeCCCcc--ccc---cCcH---HHHHHHHHhhhceeecC
Confidence 3456677899999999986543 2233332 35679965 44432100 000 0000 0112211 234444445
Q ss_pred CCc--chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHH
Q 004092 285 DYV--LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLP 362 (774)
Q Consensus 285 s~~--~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~ 362 (774)
+.. ......+++.++++++.+..+|...+. .....+..+++++|+++++.++++.+ +.......+++..+++|+..
T Consensus 154 te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~-~~~~~~~~~~~~lgl~~~~~iLvt~h-r~e~~~~~~~l~~ll~al~~ 231 (385)
T 4hwg_A 154 TEHARRYLIAEGLPAELTFKSGSHMPEVLDRF-MPKILKSDILDKLSLTPKQYFLISSH-REENVDVKNNLKELLNSLQM 231 (385)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCCSHHHHHHHH-HHHHHHCCHHHHTTCCTTSEEEEEEC-CC-----CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCcCcEEEECCchHHHHHHh-hhhcchhHHHHHcCCCcCCEEEEEeC-CchhcCcHHHHHHHHHHHHH
Confidence 443 223445666778888875444531110 01112445788899987665544444 54321112678889999999
Q ss_pred chhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHc-C-CC-CccEEEccCc--ccHHHHHHHcCEEEEcCccCcCC
Q 004092 363 LFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNL-H-YP-LGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQT 437 (774)
Q Consensus 363 L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~l-g-L~-~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qG 437 (774)
+.+++ + +.+++..++ .+++.++++ + +. ..+|.+.+.. .++..+|+.||++|.+|
T Consensus 232 l~~~~-~-------~~vv~p~~p-------~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S------ 290 (385)
T 4hwg_A 232 LIKEY-N-------FLIIFSTHP-------RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS------ 290 (385)
T ss_dssp HHHHH-C-------CEEEEEECH-------HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC------
T ss_pred HHhcC-C-------eEEEEECCh-------HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC------
Confidence 87765 5 777765553 134455544 3 21 1279998765 47899999999999777
Q ss_pred ccHHHHHHHHcCCCEEEcCCcc-cccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-HHhcCHH
Q 004092 438 FPEILVKALCFRKPIIAPDLSN-IRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRS-VKNLMAL 515 (774)
Q Consensus 438 fp~~llEAMA~G~PVIatd~gg-i~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~-ak~fs~~ 515 (774)
|.+..||+++|+|||+.+... .+|.+..| ++++++. |++++++++.++++| +..+++|++++..+ ......+
T Consensus 291 -Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~-d~~~i~~ai~~ll~d---~~~~~~m~~~~~~~~g~g~aa~ 364 (385)
T 4hwg_A 291 -GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGF-KAERVLQAVKTITEE---HDNNKRTQGLVPDYNEAGLVSK 364 (385)
T ss_dssp -TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCS-SHHHHHHHHHHHHTT---CBTTBCCSCCCHHHHTCCCHHH
T ss_pred -ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCC-CHHHHHHHHHHHHhC---hHHHHHhhccCCCCCCCChHHH
Confidence 235799999999999976543 56777776 5777754 899999999999999 87777776655555 4445555
Q ss_pred HHHHHHHHHH
Q 004092 516 ETIEGYAMLL 525 (774)
Q Consensus 516 ~~a~~y~~L~ 525 (774)
++++...+++
T Consensus 365 rI~~~l~~~~ 374 (385)
T 4hwg_A 365 KILRIVLSYV 374 (385)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5655555544
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.5e-09 Score=119.08 Aligned_cols=114 Identities=16% Similarity=0.123 Sum_probs=88.3
Q ss_pred CCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCC-
Q 004092 402 HYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKE- 476 (774)
Q Consensus 402 gL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~- 476 (774)
.+++ +|.+.++..+. ++|..||++|..+ -.++++|||++|+|+|+.+..+ ..+.+.+...|+.++.+
T Consensus 302 ~~~~-~v~~~~~~~~~-~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~ 373 (424)
T 2iya_A 302 EVPP-NVEVHQWVPQL-DILTKASAFITHA------GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQ 373 (424)
T ss_dssp SCCT-TEEEESSCCHH-HHHTTCSEEEECC------CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGG
T ss_pred cCCC-CeEEecCCCHH-HHHhhCCEEEECC------chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCC
Confidence 3555 89999999777 8999999998643 3579999999999999998753 33455555678888754
Q ss_pred -CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 004092 477 -NIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLE 526 (774)
Q Consensus 477 -d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e 526 (774)
++++++++|.++++| ++.++++++.+.+....-..+++++...+++.
T Consensus 374 ~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 374 VTAEKLREAVLAVASD---PGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 899999999999999 88888888777766555566666666665554
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1.7e-10 Score=133.06 Aligned_cols=310 Identities=7% Similarity=-0.053 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc------hhHHHHhhhcCccEEEEcCCchhHHHHHHHh
Q 004092 162 QMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG------REKASFVNWLNYDGILVNSLEAKVVISNIMQ 235 (774)
Q Consensus 162 ~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~------~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~ 235 (774)
....+... .+..++|..++ .... ....+...-.+..+... ..+...|...++||++--+.... ....++.
T Consensus 293 ~~~~~l~~-dR~~FEV~~Ys-~~~~-D~~tr~~~d~f~~l~~~s~~~~~~~ia~~Ir~d~IDILVdL~g~t~-~~~i~~a 368 (631)
T 3q3e_A 293 THSTSMIA-AREHFYLIGLG-SPSV-DQAGQEVFDEFHLVAGDNMKQKLEFIRSVCESNGAAIFYMPSIGMD-MTTIFAS 368 (631)
T ss_dssp HHHHHHHH-HTTTSEEEEEE-CTTS-CHHHHTTSSEEEECCCSSHHHHHHHHHHHHHHHTCSEEEESCCSSS-HHHHHHT
T ss_pred HHHHHHHh-hhhcEEEEEEe-CCCC-CHHHHhcCcEEEECCCCCccccHHHHHHHHHhcCCCEEEECCCCCC-chhHHHH
Confidence 33334444 46678988888 4322 11222222234444433 35667788899999887544332 2222232
Q ss_pred CCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCcchhhcccCCCCCEEEeCCCCCCcccccc
Q 004092 236 EPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADT 315 (774)
Q Consensus 236 ~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~ 315 (774)
..+-.|+-.++-|.+.-.-+...-....+... .+ ....-.+++..+|++.........
T Consensus 369 -a~RpAPVQvs~lGyp~TTGl~~iDY~i~D~~~--------------~~-------~~~~ysEklirLP~~~~~~~p~~~ 426 (631)
T 3q3e_A 369 -NTRLAPIQAIALGHPATTHSDFIEYVIVEDDY--------------VG-------SEECFSETLLRLPKDALPYVPSAL 426 (631)
T ss_dssp -TSCCSSEEEEECSSCSCCCCTTCCEEEEEGGG--------------CC-------CGGGCSSEEEEECTTSSCCCCCTT
T ss_pred -hCCCchheEeccCCCcccCcccCCEEEeCCCC--------------CC-------cccCceeeEEECCCCccccCCccc
Confidence 13447888877773211000000000001100 00 001113566666642211100011
Q ss_pred cCchhhHHHHHHhCCCCC--CEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEE--EEeCCCCCchH
Q 004092 316 NMDLYNDTVRVKMGFKPD--DLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVM--ILSGDSTSNYS 391 (774)
Q Consensus 316 ~~~~~k~~lR~~lgl~~~--~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~Lv--IvGG~~~e~Y~ 391 (774)
.+ .+..++++.+ .+++++++ + .. |..+.+++++.++.++.|+ ..++ ++|..... .
T Consensus 427 ~p------~r~~~~lp~~~G~v~Fg~fn-~--~~---Ki~p~~l~~WarIL~~vP~-------s~L~l~~~g~~~g~--~ 485 (631)
T 3q3e_A 427 AP------EKVDYLLRENPEVVNIGIAS-T--TM---KLNPYFLEALKAIRDRAKV-------KVHFHFALGQSNGI--T 485 (631)
T ss_dssp CC------SSCCCCCCSCCSEEEEEEEE-C--ST---TCCHHHHHHHHHHHHHCSS-------EEEEEEEESSCCGG--G
T ss_pred CC------ccccccCCcCCCeEEEEECC-c--cc---cCCHHHHHHHHHHHHhCCC-------cEEEEEecCCCchh--h
Confidence 11 1335677664 44455555 3 23 8889999999999999887 5554 35621111 1
Q ss_pred HHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccc----
Q 004092 392 VVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVD---- 465 (774)
Q Consensus 392 ~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~---- 465 (774)
..+.+.+.+.|+.+ +|.|.|.. .+....|+.+|+++.|+.+. .|.+.+|||+||+|||+....+...-+.
T Consensus 486 ~~~~~~~~~~GI~~-Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~---GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL 561 (631)
T 3q3e_A 486 HPYVERFIKSYLGD-SATAHPHSPYHQYLRILHNCDMMVNPFPFG---NTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF 561 (631)
T ss_dssp HHHHHHHHHHHHGG-GEEEECCCCHHHHHHHHHTCSEEECCSSSC---CSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCc-cEEEcCCCCHHHHHHHHhcCcEEEeCCccc---CChHHHHHHHcCCCEEeccCCcHHHHhHHHHH
Confidence 33334455678887 89999976 57778999999999998665 4999999999999999977665544332
Q ss_pred --cCccEE-EEcCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-H--hcC--HHHHHHHHHHHHHH
Q 004092 466 --DRVNGY-LFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-K--NLM--ALETIEGYAMLLEN 527 (774)
Q Consensus 466 --dg~~G~-Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a-k--~fs--~~~~a~~y~~L~e~ 527 (774)
-|..++ +.+ |.+++++...++.+| ++.+++++++.++.. . -|+ ...+.+.|.+++++
T Consensus 562 ~~~GLpE~LIA~--d~eeYv~~Av~La~D---~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~ 626 (631)
T 3q3e_A 562 KRLGLPEWLIAN--TVDEYVERAVRLAEN---HQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNA 626 (631)
T ss_dssp HHTTCCGGGEES--SHHHHHHHHHHHHHC---HHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHH
T ss_pred HhcCCCcceecC--CHHHHHHHHHHHhCC---HHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHH
Confidence 244443 333 799999999999999 999999999888775 2 243 34444444444444
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=5.8e-09 Score=114.60 Aligned_cols=110 Identities=14% Similarity=0.065 Sum_probs=78.4
Q ss_pred CCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCCC
Q 004092 402 HYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKEN 477 (774)
Q Consensus 402 gL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~d 477 (774)
.+++ +|.+.++. ....+|..+|+||.- |-.++++|||++|+|+|+.+..+ ..+.+.+...|+.++.
T Consensus 285 ~~~~-~v~~~~~~-p~~~lL~~~~~~v~h------~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~-- 354 (400)
T 4amg_A 285 ELPA-NVRVVEWI-PLGALLETCDAIIHH------GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEA-- 354 (400)
T ss_dssp CCCT-TEEEECCC-CHHHHHTTCSEEEEC------CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCT--
T ss_pred cCCC-CEEEEeec-CHHHHhhhhhheecc------CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCC--
Confidence 5666 89999988 467889999999853 34578999999999999976654 3345555445777764
Q ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004092 478 IKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAML 524 (774)
Q Consensus 478 ~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L 524 (774)
.+..+++|.++++| +..+++..+.+.+....=...+.++..+++
T Consensus 355 ~~~~~~al~~lL~d---~~~r~~a~~l~~~~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 355 GSLGAEQCRRLLDD---AGLREAALRVRQEMSEMPPPAETAAXLVAL 398 (400)
T ss_dssp TTCSHHHHHHHHHC---HHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHcC---HHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 34568899999999 887777666665555444666666655543
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.8e-08 Score=112.02 Aligned_cols=154 Identities=10% Similarity=-0.029 Sum_probs=104.1
Q ss_pred CEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEE-e-CCCCCchHHHHHHHHHHcCCCCccEEEc
Q 004092 334 DLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMIL-S-GDSTSNYSVVIEAIAHNLHYPLGVVKHM 411 (774)
Q Consensus 334 ~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIv-G-G~~~e~Y~~~L~~la~~lgL~~~~V~fl 411 (774)
..+++++|+..... +..+.+++|++.+. .+++++ | +... . ..+++ +|.+.
T Consensus 239 ~~v~v~~Gs~~~~~---~~~~~~~~al~~~~------------~~~v~~~g~~~~~-~-----------~~~~~-~v~~~ 290 (415)
T 1iir_A 239 PPVYLGFGSLGAPA---DAVRVAIDAIRAHG------------RRVILSRGWADLV-L-----------PDDGA-DCFAI 290 (415)
T ss_dssp CCEEEECC---CCH---HHHHHHHHHHHHTT------------CCEEECTTCTTCC-C-----------SSCGG-GEEEC
T ss_pred CeEEEeCCCCCCcH---HHHHHHHHHHHHCC------------CeEEEEeCCCccc-c-----------cCCCC-CEEEe
Confidence 45677777432344 77778888887652 355555 5 3221 0 14555 89999
Q ss_pred cCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCC--CHHHHHHHH
Q 004092 412 AAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKE--NIKALTHII 485 (774)
Q Consensus 412 G~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~--d~e~La~aI 485 (774)
++.++ .++|..||++|..+ | .++++|||++|+|+|+.+..+ ..+.+.+...|+.++.+ +.++++++|
T Consensus 291 ~~~~~-~~~l~~~d~~v~~~-----G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i 363 (415)
T 1iir_A 291 GEVNH-QVLFGRVAAVIHHG-----G-AGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAAL 363 (415)
T ss_dssp SSCCH-HHHGGGSSEEEECC-----C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHH
T ss_pred CcCCh-HHHHhhCCEEEeCC-----C-hhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHH
Confidence 99866 46789999999753 3 479999999999999987754 34556655679888753 789999999
Q ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 486 LQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 486 ~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
.++ +| ++.++++.+.+++.. ...-++...+.+++++.
T Consensus 364 ~~l-~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 364 ATA-LT---PETHARATAVAGTIR----TDGAAVAARLLLDAVSR 400 (415)
T ss_dssp HHH-TS---HHHHHHHHHHHHHSC----SCHHHHHHHHHHHHHHT
T ss_pred HHH-cC---HHHHHHHHHHHHHHh----hcChHHHHHHHHHHHHh
Confidence 999 88 776666655554433 33444455555666554
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=2.3e-08 Score=110.89 Aligned_cols=155 Identities=9% Similarity=-0.044 Sum_probs=99.3
Q ss_pred CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEc
Q 004092 332 PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHM 411 (774)
Q Consensus 332 ~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~fl 411 (774)
.+..+++++|+..... +....+++|+..+. +++++.+|..... ..++.+ +|.+.
T Consensus 220 ~~~~Vlv~~Gs~~~~~---~~~~~~~~al~~~~------------~~vv~~~g~~~~~----------~~~~~~-~v~~~ 273 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPA---EAARVAIEAVRAQG------------RRVVLSSGWAGLG----------RIDEGD-DCLVV 273 (404)
T ss_dssp SSCCEEECCTTSCCCT---THHHHHHHHHHHTT------------CCEEEECTTTTCC----------CSSCCT-TEEEE
T ss_pred CCCeEEEECCCCCCcH---HHHHHHHHHHHhCC------------CEEEEEeCCcccc----------cccCCC-CEEEe
Confidence 3455677777443244 66777788887652 5667766432211 113455 79999
Q ss_pred cCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccc----cccccCccEEEEcCC--CHHHHHHHH
Q 004092 412 AAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIR----KYVDDRVNGYLFPKE--NIKALTHII 485 (774)
Q Consensus 412 G~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~----EiV~dg~~G~Lv~~~--d~e~La~aI 485 (774)
++.+. ..++..||++|..+ -.+++.|||++|+|+|+.+..+-. +.+.+...|..++.+ ++++++++|
T Consensus 274 ~~~~~-~~ll~~~d~~v~~g------G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai 346 (404)
T 3h4t_A 274 GEVNH-QVLFGRVAAVVHHG------GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAAL 346 (404)
T ss_dssp SSCCH-HHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHH
T ss_pred cCCCH-HHHHhhCcEEEECC------cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHH
Confidence 99854 88999999999664 246889999999999998765432 334444568887653 789999999
Q ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 004092 486 LQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAML 524 (774)
Q Consensus 486 ~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L 524 (774)
.++++ ++.++++.+.+..... -..+.+++..+++
T Consensus 347 ~~ll~----~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~ 380 (404)
T 3h4t_A 347 ATALT----PGIRARAAAVAGTIRT-DGTTVAAKLLLEA 380 (404)
T ss_dssp HHHTS----HHHHHHHHHHHTTCCC-CHHHHHHHHHHHH
T ss_pred HHHhC----HHHHHHHHHHHHHHhh-hHHHHHHHHHHHH
Confidence 99985 3445555444433323 2344444443333
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.5e-09 Score=103.78 Aligned_cols=132 Identities=15% Similarity=0.151 Sum_probs=96.4
Q ss_pred CCCEEEEEEeccc--ccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccE
Q 004092 332 PDDLVIAIVGTQF--MYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVV 408 (774)
Q Consensus 332 ~~~~vIl~vGsrl--~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V 408 (774)
+...+++++|+.. .+. |.+..+++|+..+. .++++++ ++..+ .+++ +|
T Consensus 20 ~~~~vlv~~Gs~~~~~~~---~~~~~~~~al~~~~------------~~~~~~~g~~~~~-------------~~~~-~v 70 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTE---ERANVIASALAQIP------------QKVLWRFDGNKPD-------------TLGL-NT 70 (170)
T ss_dssp TTCEEEEECCSCCTTCCH---HHHHHHHHHHTTSS------------SEEEEECCSSCCT-------------TCCT-TE
T ss_pred CCCEEEEECCCCcccCCH---HHHHHHHHHHHhCC------------CeEEEEECCcCcc-------------cCCC-cE
Confidence 3456777788432 144 77777788875441 4777777 44321 3555 79
Q ss_pred EEccCcccHHHHH--HHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCc----ccccccccCccEEEEcCC--CHHH
Q 004092 409 KHMAAEGDVDSVL--NTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLS----NIRKYVDDRVNGYLFPKE--NIKA 480 (774)
Q Consensus 409 ~flG~~~dl~~~l--~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g----gi~EiV~dg~~G~Lv~~~--d~e~ 480 (774)
.+.|+.++ ..++ .+||++|.. |-+++++|||++|+|+|+.+.. +..+.+.+...|+++++. ++++
T Consensus 71 ~~~~~~~~-~~~l~~~~ad~~I~~------~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~ 143 (170)
T 2o6l_A 71 RLYKWIPQ-NDLLGHPKTRAFITH------GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTD 143 (170)
T ss_dssp EEESSCCH-HHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHH
T ss_pred EEecCCCH-HHHhcCCCcCEEEEc------CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHH
Confidence 99999865 5667 899999974 2368999999999999999875 345667777789999876 8999
Q ss_pred HHHHHHHHHHcCCCcHHHHHHH
Q 004092 481 LTHIILQVITNGKISPFARNIA 502 (774)
Q Consensus 481 La~aI~~Ll~d~~~~~~r~~m~ 502 (774)
++++|.++++| ++.++++.
T Consensus 144 l~~~i~~ll~~---~~~~~~a~ 162 (170)
T 2o6l_A 144 LLNALKRVIND---PSYKENVM 162 (170)
T ss_dssp HHHHHHHHHHC---HHHHHHHH
T ss_pred HHHHHHHHHcC---HHHHHHHH
Confidence 99999999999 76544443
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.97 E-value=5.5e-08 Score=108.02 Aligned_cols=138 Identities=9% Similarity=-0.064 Sum_probs=94.8
Q ss_pred CEEEEEEeccc--ccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEE-eCCCCCchHHHHHHHHHHcCCCCccEEE
Q 004092 334 DLVIAIVGTQF--MYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMIL-SGDSTSNYSVVIEAIAHNLHYPLGVVKH 410 (774)
Q Consensus 334 ~~vIl~vGsrl--~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIv-GG~~~e~Y~~~L~~la~~lgL~~~~V~f 410 (774)
..+++++|+.. ... +....+++|+..+. .+++++ |....+. ..+++ +|.+
T Consensus 238 ~~v~v~~Gs~~~~~~~---~~~~~~~~al~~~~------------~~~v~~~g~~~~~~-----------~~~~~-~v~~ 290 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIA---DAAKVAVEAIRAQG------------RRVILSRGWTELVL-----------PDDRD-DCFA 290 (416)
T ss_dssp CCEEECCTTCCSHHHH---HHHHHHHHHHHHTT------------CCEEEECTTTTCCC-----------SCCCT-TEEE
T ss_pred CeEEEecCCCCccChH---HHHHHHHHHHHHCC------------CeEEEEeCCccccc-----------cCCCC-CEEE
Confidence 44666677432 133 66777778876652 456665 5222110 14565 7999
Q ss_pred ccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcC--CCHHHHHHH
Q 004092 411 MAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPK--ENIKALTHI 484 (774)
Q Consensus 411 lG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~--~d~e~La~a 484 (774)
.++.+ ..++|..||++|.-+ -.++++|||++|+|+|+.+..+ ..+.+.+...|+.++. .+.++++++
T Consensus 291 ~~~~~-~~~ll~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~ 363 (416)
T 1rrv_A 291 IDEVN-FQALFRRVAAVIHHG------SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAA 363 (416)
T ss_dssp ESSCC-HHHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHH
T ss_pred eccCC-hHHHhccCCEEEecC------ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHH
Confidence 99985 578899999999732 3579999999999999987643 3345555567888864 478999999
Q ss_pred HHHHHHcCCCcHHHHHHHHHHHHHH
Q 004092 485 ILQVITNGKISPFARNIASIGRRSV 509 (774)
Q Consensus 485 I~~Ll~d~~~~~~r~~m~~~ar~~a 509 (774)
|.++ .| ++.++++++.+++..
T Consensus 364 i~~l-~~---~~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 364 LTTV-LA---PETRARAEAVAGMVL 384 (416)
T ss_dssp HHHH-TS---HHHHHHHHHHTTTCC
T ss_pred HHHh-hC---HHHHHHHHHHHHHHh
Confidence 9999 88 776666665544333
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=4.2e-06 Score=99.88 Aligned_cols=183 Identities=11% Similarity=0.062 Sum_probs=136.4
Q ss_pred HHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCC
Q 004092 324 VRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHY 403 (774)
Q Consensus 324 lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL 403 (774)
.|..+|++++.+++.++. + .. |=.+.+++++.++.++.|+ .+|++...+.. -...+++.+++.|+
T Consensus 513 ~R~~~gLp~~~v~f~~fN-~--~~---Ki~p~~~~~W~~IL~~vP~-------S~L~Ll~~~~~--~~~~l~~~~~~~gi 577 (723)
T 4gyw_A 513 TRSQYGLPEDAIVYCNFN-Q--LY---KIDPSTLQMWANILKRVPN-------SVLWLLRFPAV--GEPNIQQYAQNMGL 577 (723)
T ss_dssp EGGGGTCCTTSEEEECCS-C--GG---GCCHHHHHHHHHHHHHCSS-------EEEEEEETTGG--GHHHHHHHHHHTTC
T ss_pred chhhcCCCCCCEEEEeCC-c--cc---cCCHHHHHHHHHHHHhCCC-------CeEEEEeCcHH--HHHHHHHHHHhcCC
Confidence 366789998886655555 2 22 6677889999999999999 89988883322 13678889999999
Q ss_pred CCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccc-----ccc-cCccEEEEcC
Q 004092 404 PLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRK-----YVD-DRVNGYLFPK 475 (774)
Q Consensus 404 ~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~E-----iV~-dg~~G~Lv~~ 475 (774)
..++|.|.+.. ++-...|+.+||++=|..+. -+.+.+||+.+|+|||+-.-....- ++. =|..-++ .
T Consensus 578 ~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~---g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i--a 652 (723)
T 4gyw_A 578 PQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCN---GHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELI--A 652 (723)
T ss_dssp CGGGEEEEECCCHHHHHHHGGGCSEEECCSSSC---CSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGB--C
T ss_pred CcCeEEECCCCCHHHHHHHhCCCeEEeCCCCcC---CHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccc--c
Confidence 87799999965 56677888999999887654 4899999999999999964322211 110 0111122 2
Q ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHh
Q 004092 476 ENIKALTHIILQVITNGKISPFARNIASIGRRSVK---NLMALETIEGYAMLLENVL 529 (774)
Q Consensus 476 ~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak---~fs~~~~a~~y~~L~e~ll 529 (774)
.|.++..+.-.++.+| ++.+.++.+.-++... -|+....+..+++.|+.+-
T Consensus 653 ~~~~~Y~~~a~~la~d---~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w 706 (723)
T 4gyw_A 653 KNRQEYEDIAVKLGTD---LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMW 706 (723)
T ss_dssp SSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHH
Confidence 4889999999999999 9999998888777663 2888888888888887763
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.09 E-value=3.9e-05 Score=90.45 Aligned_cols=191 Identities=15% Similarity=0.072 Sum_probs=125.6
Q ss_pred HHHhCCC--CCCEEEEEEecccccccccccHHH-HHHHHHHchh--hcccCCCCCCCeEEEEEe-CCCCCchHHH----H
Q 004092 325 RVKMGFK--PDDLVIAIVGTQFMYRGLWLEHAL-ILRALLPLFS--EVSVENESNSPIKVMILS-GDSTSNYSVV----I 394 (774)
Q Consensus 325 R~~lgl~--~~~~vIl~vGsrl~~~KgiKg~~l-LLeA~~~L~~--~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~----L 394 (774)
++++|+. ++.++++++. |+... |++++ ++..+..+.+ +.|+ ....++++++.| +......... +
T Consensus 505 ~~~~Gl~vdpd~l~~~~vk-RlheY---KRq~Lnil~ii~~~~~i~~~~~--~~~~p~q~If~GKA~P~y~~aK~iIk~i 578 (796)
T 2c4m_A 505 LERQGIEIDPESIFDVQIK-RLHEY---KRQLMNALYVLDLYFRIKEDGL--TDIPARTVIFGAKAAPGYVRAKAIIKLI 578 (796)
T ss_dssp HHHHCCCCCTTSEEEEEEC-CCCGG---GTHHHHHHHHHHHHHHHHTSCC--CSSCCEEEEEECCCCTTCHHHHHHHHHH
T ss_pred HHHhCCCCCCCCcEEEEee-cchhh---cccCEeHHHHHHHHHHHhhCCC--CCCCCeEEEEEecCCHhHHHHHHHHHHH
Confidence 5566664 5677888887 88877 99999 8888887764 3332 112348999999 6544332222 3
Q ss_pred HHHHH----HcCCCC-ccEEEc-cCc-ccHHHHHHHcCEEEEcCc--cCcCCccHHHHHHHHcCCCEEEcCCcccccccc
Q 004092 395 EAIAH----NLHYPL-GVVKHM-AAE-GDVDSVLNTADVVIYGSF--LEEQTFPEILVKALCFRKPIIAPDLSNIRKYVD 465 (774)
Q Consensus 395 ~~la~----~lgL~~-~~V~fl-G~~-~dl~~~l~aaDI~V~PS~--~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~ 465 (774)
..+++ +-.+++ -+|.|+ ++. +-...++.+||++++||. .| ..|..=+-||..|.+.|++--|...|+.+
T Consensus 579 ~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~E--AsGTs~MKam~NGaL~iGtLDGanvEi~e 656 (796)
T 2c4m_A 579 NSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKE--ASGTSNMKFMMNGALTLGTMDGANVEIVD 656 (796)
T ss_dssp HHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSC--SCCHHHHHHHHTTCEEEEESSTHHHHHHH
T ss_pred HHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCC--CCchHHHHHHHcCCeEEeccCCeEeehhh
Confidence 33333 012332 035555 565 445678999999999998 88 57888899999999999998888888764
Q ss_pred c--CccEEEEcC--CCHHHHHHH---HHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 466 D--RVNGYLFPK--ENIKALTHI---ILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 466 d--g~~G~Lv~~--~d~e~La~a---I~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
+ ..||++|-. .+++++-.+ ....-.+ +. .+++-+.+.. ..|+|..- ..|..+|+++++
T Consensus 657 ~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~---~~-~~~vvd~~~~--g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 657 SVGEENAYIFGARVEELPALRESYKPYELYETV---PG-LKRALDALDN--GTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp HHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHS---TT-HHHHHHTTTS--SSSCCTTC-CHHHHHHHHHHS
T ss_pred hcCCCcEEEecCchhhHHHHHHhhChHHHhhcC---HH-HHHHHHHHHc--CCCCCCCH-HHHHHHHHHHHh
Confidence 3 469999987 677776653 2223334 32 2222221111 35888776 779999999875
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=5.2e-05 Score=89.41 Aligned_cols=191 Identities=11% Similarity=0.042 Sum_probs=125.0
Q ss_pred HHHHhCCC--CCCEEEEEEecccccccccccHHH-HHHHHHHchh--hcccCCCCCCCeEEEEEe-CCCCCchHHHHHHH
Q 004092 324 VRVKMGFK--PDDLVIAIVGTQFMYRGLWLEHAL-ILRALLPLFS--EVSVENESNSPIKVMILS-GDSTSNYSVVIEAI 397 (774)
Q Consensus 324 lR~~lgl~--~~~~vIl~vGsrl~~~KgiKg~~l-LLeA~~~L~~--~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~l 397 (774)
+++++|+. ++.++++++. |+... |++++ ++..+..+.+ ..|+ ..-.++.+++.| +.........+.++
T Consensus 514 l~~~~Gl~vdpd~l~~~~vk-Rl~eY---KRq~Lnil~ii~~~~~i~~~~~--~~~~p~q~If~GKA~P~y~~aK~iIk~ 587 (796)
T 1l5w_A 514 VKVRTGIEINPQAIFDIQIK-RLHEY---KRQHLNLLHILALYKEIRENPQ--ADRVPRVFLFGAKAAPGYYLAKNIIFA 587 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEES-CCCGG---GTHHHHHHHHHHHHHHHHTCTT--CCCCCEEEEEECCCCTTCHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeee-cchhh---cccCEeHHHHHHHHHHHhcCCC--CCCCCeEEEEEecCChhHHHHHHHHHH
Confidence 35667765 5677788887 88877 99999 8888887754 2222 112458999999 65443322223222
Q ss_pred HHHc--------CCCC-ccEEEc-cCc-ccHHHHHHHcCEEEEcCc--cCcCCccHHHHHHHHcCCCEEEcCCccccccc
Q 004092 398 AHNL--------HYPL-GVVKHM-AAE-GDVDSVLNTADVVIYGSF--LEEQTFPEILVKALCFRKPIIAPDLSNIRKYV 464 (774)
Q Consensus 398 a~~l--------gL~~-~~V~fl-G~~-~dl~~~l~aaDI~V~PS~--~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV 464 (774)
+..+ .+++ -+|.|+ ++. +-...++.+||++++||. .| ..|..=+-||..|.+.|++--|...|+.
T Consensus 588 i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~E--AsGTs~MKam~NGaL~iGtLDGanvEi~ 665 (796)
T 1l5w_A 588 INKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKE--ASGTGNMKLALNGALTVGTLDGANVEIA 665 (796)
T ss_dssp HHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTC--CCCSHHHHHHHTTCEEEECSCTTHHHHH
T ss_pred HHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCC--CCchHHHHHHHcCCeeecCcCCeeeehh
Confidence 3222 2221 046666 455 445678999999999998 88 4777779999999999999888888876
Q ss_pred cc--CccEEEEcCCCHHHHHHH-------HHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhc
Q 004092 465 DD--RVNGYLFPKENIKALTHI-------ILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 465 ~d--g~~G~Lv~~~d~e~La~a-------I~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
++ ..||++|-. +++++.+. ....-.+ + ..+++-+.+.. ..|+|..- ..|..+|++++.
T Consensus 666 e~vG~~NgF~FG~-~~~ev~~l~~~~y~a~~~y~~~---~-~~~~vvd~~~~--g~fs~~~~-~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 666 EKVGEENIFIFGH-TVEQVKAILAKGYDPVKWRKKD---K-VLDAVLKELES--GKYSDGDK-HAFDQMLHSIGK 732 (796)
T ss_dssp HHHCGGGSEECSC-CHHHHHHHHHHCCCHHHHHHHC---H-HHHHHHHHHHH--TTTTTTCT-TTTHHHHHHTST
T ss_pred hccCCCcEEEecC-CHHHHHHHHHcccCHHHHhhcC---H-HHHHHHHHHHc--CCCCCCcH-HHHHHHHHHHhc
Confidence 43 468999986 77776632 2222233 3 33333332221 46888775 779999999865
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.96 E-value=0.00012 Score=86.53 Aligned_cols=149 Identities=15% Similarity=0.052 Sum_probs=99.6
Q ss_pred HHHHhCCC--CCCEEEEEEecccccccccccHHHH-HHHHHHchh--hcccCCCCCCCeEEEEEe-CCCCCchHHH----
Q 004092 324 VRVKMGFK--PDDLVIAIVGTQFMYRGLWLEHALI-LRALLPLFS--EVSVENESNSPIKVMILS-GDSTSNYSVV---- 393 (774)
Q Consensus 324 lR~~lgl~--~~~~vIl~vGsrl~~~KgiKg~~lL-LeA~~~L~~--~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~---- 393 (774)
+++++|+. ++.++++++. |+... |+++++ +..+..+.+ +.|+ ..-.++.+++.| +.........
T Consensus 538 l~~~~Gl~vdpd~l~~g~vk-Rl~eY---KRq~L~~l~~i~~~~~i~~~~~--~~~~p~q~If~GKA~P~y~~aK~iIkl 611 (824)
T 2gj4_A 538 LEREYKVHINPNSLFDVQVK-RIHEY---KRQLLNCLHVITLYNRIKKEPN--KFVVPRTVMIGGKAAPGYHMAKMIIKL 611 (824)
T ss_dssp HHHHHCCCCCTTSEEEEEES-CCCGG---GTHHHHHHHHHHHHHHHHHCTT--SCCCCEEEEEECCCCTTCHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeee-cchhh---cchhhHHHHHHHHHHHHHhCCC--CCCCCEEEEEEEeCCHhHHHHHHHHHH
Confidence 44556664 5677778887 88877 999997 888887752 3332 111247898888 6444222222
Q ss_pred HHHHHHHcCCC---Cc--cEEEc-cCc-ccHHHHHHHcCEEEEcCc--cCcCCccHHHHHHHHcCCCEEEcCCccccccc
Q 004092 394 IEAIAHNLHYP---LG--VVKHM-AAE-GDVDSVLNTADVVIYGSF--LEEQTFPEILVKALCFRKPIIAPDLSNIRKYV 464 (774)
Q Consensus 394 L~~la~~lgL~---~~--~V~fl-G~~-~dl~~~l~aaDI~V~PS~--~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV 464 (774)
+..+++..+-. .+ +|.|+ ++. +-...++++||++++||. .| ..|..=+-||..|.+.|+|--|...|+.
T Consensus 612 i~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~E--AsGTs~MKamlNGaLtigtlDGanvEi~ 689 (824)
T 2gj4_A 612 ITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTE--ASGTGNMKFMLNGALTIGTMDGANVEMA 689 (824)
T ss_dssp HHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSC--SCCSHHHHHHHTTCEEEECSCTTHHHHH
T ss_pred HHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCC--CCchHHHHHHHcCceEEEEecCccchhh
Confidence 44444433110 12 36655 565 445668999999999998 88 4777779999999999999877777765
Q ss_pred c--cCccEEEEcCCCHHHH
Q 004092 465 D--DRVNGYLFPKENIKAL 481 (774)
Q Consensus 465 ~--dg~~G~Lv~~~d~e~L 481 (774)
+ .+.||++|... ++++
T Consensus 690 e~vG~~Ngf~FG~~-~~ev 707 (824)
T 2gj4_A 690 EEAGEENFFIFGMR-VEDV 707 (824)
T ss_dssp HHHCGGGSEECSCC-HHHH
T ss_pred hccCCCCEEEeCCc-HHHH
Confidence 3 45689999863 5555
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.0021 Score=67.73 Aligned_cols=242 Identities=9% Similarity=0.049 Sum_probs=125.8
Q ss_pred eEEEEe-cCCCCC-hHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEccc--chhHHHHhhhcCccEEEE
Q 004092 146 QLALVF-PDLLID-PQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQT--GREKASFVNWLNYDGILV 221 (774)
Q Consensus 146 rialV~-~~L~~G-G~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~--~~~l~~~i~~~~~DIIhv 221 (774)
+|+|.. ++..+| |--..+.+||+.|. +|..++..... ...+..|.++..++. ...+...++..++|+|++
T Consensus 2 ki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~--~~~~~~g~~v~~l~~~d~~~~~~~l~~~~~d~lIv 75 (282)
T 3hbm_A 2 KVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEG--SLIDEIPYPVYELSSESIYELINLIKEEKFELLII 75 (282)
T ss_dssp CEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTT--CCGGGCCSCEEECSSSCHHHHHHHHHHHTCSEEEE
T ss_pred EEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcH--hHHHHCCCeEEEcCccCHHHHHHHHHhCCCCEEEE
Confidence 344433 344555 66678889999988 78777765422 223345777777653 234556677789999999
Q ss_pred cCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc-chhhcccCCCCCE
Q 004092 222 NSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV-LPMMYSAFDAGNY 300 (774)
Q Consensus 222 hs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~-~~~i~~~v~~~ki 300 (774)
.+.....-....+.. ..++++++ +.+. .. . . .++.+.-++-. ....|...-+...
T Consensus 76 D~Y~~~~~~~~~lk~-~~~~~i~~-iDD~--~~---~---~--------------~~Dllin~~~~~~~~~Y~~~~p~~~ 131 (282)
T 3hbm_A 76 DHYGISVDDEKLIKL-ETGVKILS-FDDE--IK---P---H--------------HCDILLNVNAYAKASDYEGLVPFKC 131 (282)
T ss_dssp ECTTCCHHHHHHHHH-HHCCEEEE-ECSS--CC---C---C--------------CCSEEEECSTTCCGGGGTTTCC-CC
T ss_pred ECCCCCHHHHHHHHH-hcCcEEEE-EecC--CC---c---c--------------cCCEEEeCCcccchhhccccCCCCC
Confidence 888764444333321 11345543 3321 10 0 0 12222222111 1111221111111
Q ss_pred EEeCCCCCCcccccccCchhhHHHHHHh-CCCC-CCEEEEEEeccccccccccc-HHHHHHHHHHchhhcccCCCCCCCe
Q 004092 301 YVIPGSPAKAWEADTNMDLYNDTVRVKM-GFKP-DDLVIAIVGTQFMYRGLWLE-HALILRALLPLFSEVSVENESNSPI 377 (774)
Q Consensus 301 ~vIpg~gvd~~~~~~~~~~~k~~lR~~l-gl~~-~~~vIl~vGsrl~~~KgiKg-~~lLLeA~~~L~~~~p~~~~~~~~v 377 (774)
.+.-|. + +-+.. +++...- ...+ ...+++++|| ... .+ ...++++ +.+. ..
T Consensus 132 ~~l~G~--~---Y~~lR----~eF~~~~~~~r~~~~~ILv~~GG-~d~----~~l~~~vl~~---L~~~-~~-------- 185 (282)
T 3hbm_A 132 EVRCGF--S---YALIR----EEFYQEAKENRKKKYDFFICMGG-TDI----KNLSLQIASE---LPKT-KI-------- 185 (282)
T ss_dssp EEEESG--G---GCCCC----HHHHHHTTCCCCCCEEEEEECCS-CCT----TCHHHHHHHH---SCTT-SC--------
T ss_pred eEeeCC--c---ccccC----HHHHHhhhhccccCCeEEEEECC-Cch----hhHHHHHHHH---hhcC-CC--------
Confidence 122221 0 01111 1111110 1122 2345566674 344 33 2233333 3321 11
Q ss_pred EEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcC
Q 004092 378 KVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456 (774)
Q Consensus 378 ~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd 456 (774)
-.+|.| +.. ..+.+++.+++ .+ ++.+.++.+++.++|++||++|.+. |.++.|++++|+|.|.-+
T Consensus 186 i~vv~G~~~~---~~~~l~~~~~~--~~--~v~v~~~~~~m~~~m~~aDlvI~~g-------G~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 186 ISIATSSSNP---NLKKLQKFAKL--HN--NIRLFIDHENIAKLMNESNKLIISA-------SSLVNEALLLKANFKAIC 251 (282)
T ss_dssp EEEEECTTCT---THHHHHHHHHT--CS--SEEEEESCSCHHHHHHTEEEEEEES-------SHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCch---HHHHHHHHHhh--CC--CEEEEeCHHHHHHHHHHCCEEEECC-------cHHHHHHHHcCCCEEEEe
Confidence 345566 432 23666666653 33 5999999999999999999999842 379999999999998865
Q ss_pred C
Q 004092 457 L 457 (774)
Q Consensus 457 ~ 457 (774)
.
T Consensus 252 ~ 252 (282)
T 3hbm_A 252 Y 252 (282)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.058 Score=57.49 Aligned_cols=115 Identities=10% Similarity=0.135 Sum_probs=72.6
Q ss_pred hHHHHHHhCCC-CCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHH
Q 004092 321 NDTVRVKMGFK-PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAH 399 (774)
Q Consensus 321 k~~lR~~lgl~-~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~ 399 (774)
.+..++.+++. ++..+++..|++....|.|. .+.+.+++..|.++ + ++++++|++... +..+++.+
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp-~~~~~~l~~~L~~~--~-------~~vvl~g~~~e~---~~~~~i~~ 233 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWP-HYHYAELAKQLIDE--G-------YQVVLFGSAKDH---EAGNEILA 233 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCC-HHHHHHHHHHHHHT--T-------CEEEECCCGGGH---HHHHHHHT
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccCCCC-HHHHHHHHHHHHHC--C-------CeEEEEeChhhH---HHHHHHHH
Confidence 45567778876 45567777786454444443 44567777777654 3 788889965431 33344444
Q ss_pred HcC--CCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEc
Q 004092 400 NLH--YPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAP 455 (774)
Q Consensus 400 ~lg--L~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIat 455 (774)
..+ .....+.+.|.. .++..+++.||++|... + | .+-.|.|+|+|+|+-
T Consensus 234 ~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~D-----s-g-~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 234 ALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTND-----S-G-LMHVAAALNRPLVAL 286 (348)
T ss_dssp TSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEES-----S-H-HHHHHHHTTCCEEEE
T ss_pred hhhhccccceEeccCcCCHHHHHHHHHhCCEEEecC-----C-H-HHHHHHHcCCCEEEE
Confidence 221 012135667754 78999999999999874 1 2 233399999999983
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.019 Score=64.52 Aligned_cols=95 Identities=12% Similarity=0.024 Sum_probs=69.9
Q ss_pred cEEEccCcccHHHHHH--HcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----ccccccC-ccEEEEcC--CC
Q 004092 407 VVKHMAAEGDVDSVLN--TADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKYVDDR-VNGYLFPK--EN 477 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~--aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~EiV~dg-~~G~Lv~~--~d 477 (774)
++.+.++..+. .+|+ ++|+||.= |-.++++||+++|+|+|+-+..+- ...+.+. ..|+.++. -+
T Consensus 326 ~~~v~~w~pq~-~vL~h~~~~~fvth------~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~ 398 (456)
T 2c1x_A 326 YGMVVPWAPQA-EVLAHEAVGAFVTH------CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFT 398 (456)
T ss_dssp TEEEESCCCHH-HHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCC
T ss_pred ceEEecCCCHH-HHhcCCcCCEEEec------CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcC
Confidence 68888988764 6888 77888853 336789999999999999776432 2345444 45887764 36
Q ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhc
Q 004092 478 IKALTHIILQVITNGKISPFARNIASIGRRSVKNL 512 (774)
Q Consensus 478 ~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~f 512 (774)
.++++++|.++++| ++ .++|.+++++..+.+
T Consensus 399 ~~~l~~~i~~ll~~---~~-~~~~r~~a~~l~~~~ 429 (456)
T 2c1x_A 399 KSGLMSCFDQILSQ---EK-GKKLRENLRALRETA 429 (456)
T ss_dssp HHHHHHHHHHHHHS---HH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCC---Cc-HHHHHHHHHHHHHHH
Confidence 89999999999998 65 556777776666443
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.035 Score=62.30 Aligned_cols=95 Identities=7% Similarity=-0.018 Sum_probs=67.6
Q ss_pred cEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----ccccccC-ccEEEEcC--CCHH
Q 004092 407 VVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKYVDDR-VNGYLFPK--ENIK 479 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~EiV~dg-~~G~Lv~~--~d~e 479 (774)
++.+.++..+ ..+|+.+++-++-+. |--++++||+++|+|+|+-+..+- ...+.+. ..|+.++. -+.+
T Consensus 328 ~~~vv~w~Pq-~~vL~h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~ 402 (454)
T 3hbf_A 328 KGKIVAWAPQ-VEILKHSSVGVFLTH----SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKE 402 (454)
T ss_dssp TEEEESSCCH-HHHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHH
T ss_pred ceEEEeeCCH-HHHHhhcCcCeEEec----CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHH
Confidence 6888899876 589999995444442 235788999999999999776432 2345553 56887764 4689
Q ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Q 004092 480 ALTHIILQVITNGKISPFARNIASIGRRSVK 510 (774)
Q Consensus 480 ~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak 510 (774)
+++++|.+++++ + ..++|++++++..+
T Consensus 403 ~l~~av~~ll~~---~-~~~~~r~~a~~l~~ 429 (454)
T 3hbf_A 403 SIKKALELTMSS---E-KGGIMRQKIVKLKE 429 (454)
T ss_dssp HHHHHHHHHHSS---H-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC---C-hHHHHHHHHHHHHH
Confidence 999999999977 4 34456666655553
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=96.17 E-value=0.18 Score=56.83 Aligned_cols=95 Identities=12% Similarity=0.078 Sum_probs=68.5
Q ss_pred cEEEccCcccHHHHHHHcCE--EEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----ccccc-cCccEEEEcC-CCH
Q 004092 407 VVKHMAAEGDVDSVLNTADV--VIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKYVD-DRVNGYLFPK-ENI 478 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~aaDI--~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~EiV~-dg~~G~Lv~~-~d~ 478 (774)
++.+.++..+. .+|+.+++ ||.- |-.++++||+++|+|+|+-+..+- ...+. +-..|+.++. -+.
T Consensus 354 ~~~v~~~~pq~-~~L~h~~~~~~vth------~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~ 426 (482)
T 2pq6_A 354 RGLIASWCPQD-KVLNHPSIGGFLTH------CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKR 426 (482)
T ss_dssp TEEEESCCCHH-HHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCH
T ss_pred CEEEEeecCHH-HHhcCCCCCEEEec------CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCH
Confidence 78899998776 58876665 5542 346789999999999999876532 23342 4445877752 378
Q ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhc
Q 004092 479 KALTHIILQVITNGKISPFARNIASIGRRSVKNL 512 (774)
Q Consensus 479 e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~f 512 (774)
++++++|.++++| ++ .++|.+++++..+.+
T Consensus 427 ~~l~~~i~~ll~~---~~-~~~~r~~a~~l~~~~ 456 (482)
T 2pq6_A 427 EELAKLINEVIAG---DK-GKKMKQKAMELKKKA 456 (482)
T ss_dssp HHHHHHHHHHHTS---HH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC---Cc-HHHHHHHHHHHHHHH
Confidence 9999999999998 65 466777777666543
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=95.67 E-value=1.4 Score=47.30 Aligned_cols=112 Identities=12% Similarity=0.118 Sum_probs=70.9
Q ss_pred HHHHhCCCCC-CEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcC
Q 004092 324 VRVKMGFKPD-DLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLH 402 (774)
Q Consensus 324 lR~~lgl~~~-~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lg 402 (774)
+..+.|+.++ ..+++..|++.. .|.| ..+...+.+..|.++ . .+++++|++... +..+++++.++
T Consensus 175 ~l~~~g~~~~~~~i~i~pga~~~-~k~w-p~~~~~~l~~~l~~~--g-------~~vvl~g~~~e~---~~~~~i~~~~~ 240 (349)
T 3tov_A 175 FYSSHGLTDTDILIGFNIGSAVP-EKRW-PAERFAHVADYFGRL--G-------YKTVFFGGPMDL---EMVQPVVEQME 240 (349)
T ss_dssp HHHHTTCCTTCCEEEEECCCSSG-GGCC-CHHHHHHHHHHHHHH--T-------CEEEECCCTTTH---HHHHHHHHTCS
T ss_pred HHHHcCCCCCCCEEEEeCCCCCc-cCCC-CHHHHHHHHHHHHhC--C-------CeEEEEeCcchH---HHHHHHHHhcc
Confidence 3445677654 456666775543 3333 345567777777655 3 677888965542 44556666444
Q ss_pred CCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCc
Q 004092 403 YPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLS 458 (774)
Q Consensus 403 L~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g 458 (774)
- . .+.+.|.. .++..+++.||++|.+- .|..-+ |.|+|+|+|+--.+
T Consensus 241 ~-~-~~~l~g~~sl~e~~ali~~a~~~i~~D------sG~~Hl-Aaa~g~P~v~lfg~ 289 (349)
T 3tov_A 241 T-K-PIVATGKFQLGPLAAAMNRCNLLITND------SGPMHV-GISQGVPIVALYGP 289 (349)
T ss_dssp S-C-CEECTTCCCHHHHHHHHHTCSEEEEES------SHHHHH-HHTTTCCEEEECSS
T ss_pred c-c-cEEeeCCCCHHHHHHHHHhCCEEEECC------CCHHHH-HHhcCCCEEEEECC
Confidence 2 2 46777744 78999999999999762 233333 89999999995333
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.22 Score=56.03 Aligned_cols=93 Identities=8% Similarity=-0.044 Sum_probs=61.9
Q ss_pred EEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----cccc-ccCccEEEEcC-----CC
Q 004092 408 VKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKYV-DDRVNGYLFPK-----EN 477 (774)
Q Consensus 408 V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~EiV-~dg~~G~Lv~~-----~d 477 (774)
+...++..+. .+|+.+++-++-+. |--++++||+++|+|+|+-+..+- ...+ +.-..|+.++. -+
T Consensus 341 ~~v~~w~Pq~-~vL~h~~v~~fvtH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~ 415 (480)
T 2vch_A 341 FVIPFWAPQA-QVLAHPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR 415 (480)
T ss_dssp EEEESCCCHH-HHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred EEEeCccCHH-HHhCCCCcCeEEec----ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccC
Confidence 4555688665 89998896444332 346788999999999999776532 2333 44445777654 37
Q ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Q 004092 478 IKALTHIILQVITNGKISPFARNIASIGRRSV 509 (774)
Q Consensus 478 ~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~a 509 (774)
.++++++|.+++.+ + .-.++.+++++..
T Consensus 416 ~~~l~~av~~vl~~---~-~~~~~r~~a~~l~ 443 (480)
T 2vch_A 416 REEVARVVKGLMEG---E-EGKGVRNKMKELK 443 (480)
T ss_dssp HHHHHHHHHHHHTS---T-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---c-chHHHHHHHHHHH
Confidence 89999999999984 3 2233444444444
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=95.43 E-value=0.25 Score=55.39 Aligned_cols=78 Identities=12% Similarity=0.029 Sum_probs=57.6
Q ss_pred cEEEccCcccHHHHHH--HcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----ccc-cccCccEEEE-c---C
Q 004092 407 VVKHMAAEGDVDSVLN--TADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKY-VDDRVNGYLF-P---K 475 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~--aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~Ei-V~dg~~G~Lv-~---~ 475 (774)
++...++..+. .+|+ ++|+||.=. -.++++||+++|+|+|+-+..+- ... +++-..|+.+ . .
T Consensus 333 ~~~v~~w~pq~-~vL~h~~~~~fvth~------G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~ 405 (463)
T 2acv_A 333 KGMICGWAPQV-EVLAHKAIGGFVSHC------GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRK 405 (463)
T ss_dssp SEEEESSCCHH-HHHHSTTEEEEEECC------CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCT
T ss_pred CEEEEccCCHH-HHhCCCccCeEEecC------CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCC
Confidence 68888888766 5676 688888543 36789999999999999876432 234 4454568887 2 2
Q ss_pred ----CCHHHHHHHHHHHHHc
Q 004092 476 ----ENIKALTHIILQVITN 491 (774)
Q Consensus 476 ----~d~e~La~aI~~Ll~d 491 (774)
-+.++++++|.+++++
T Consensus 406 ~~~~~~~~~l~~ai~~ll~~ 425 (463)
T 2acv_A 406 GSDVVAAEEIEKGLKDLMDK 425 (463)
T ss_dssp TCCCCCHHHHHHHHHHHTCT
T ss_pred CCccccHHHHHHHHHHHHhc
Confidence 3789999999999963
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=95.12 E-value=0.016 Score=58.69 Aligned_cols=46 Identities=20% Similarity=0.222 Sum_probs=39.1
Q ss_pred cEEEccCcccHHHHHH-HcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCc
Q 004092 407 VVKHMAAEGDVDSVLN-TADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLS 458 (774)
Q Consensus 407 ~V~flG~~~dl~~~l~-aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~g 458 (774)
++...++.+++..+|+ .||++|.-. -.++++||+++|+|.|.-+.+
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvIsha------GagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVISHA------GTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEEESS------CHHHHHHHHHTTCCCCEECCS
T ss_pred eEEEeeccchHHHHHHhcCCEEEECC------cHHHHHHHHHhCCCEEEEcCc
Confidence 5777888899999999 999999653 467999999999999886654
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=94.90 E-value=0.17 Score=60.01 Aligned_cols=242 Identities=14% Similarity=0.148 Sum_probs=121.5
Q ss_pred CccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHh---h--hhhhhHHHHHHHHHHHhccEEEccCCcc-
Q 004092 215 NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNY---A--SSGQLELLNDWKKVFNRATVVVFPDYVL- 288 (774)
Q Consensus 215 ~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~---~--~~~~~~li~~~~~~~~~a~~vv~ps~~~- 288 (774)
..++++.++.... .+ .+..+..+|.++||.++....... . ..................+.+..++...
T Consensus 417 ~a~~~v~n~~~~~-----~~-~k~~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~s~~~~ 490 (729)
T 3l7i_A 417 EASHWVSNARTPL-----YL-NKKENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFNRETSRWDYLISPNRYST 490 (729)
T ss_dssp HEEEEEESSCCCT-----TS-CCCTTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHHHHHTTCSEEEESSHHHH
T ss_pred cCcEEEECCCCcc-----cc-ccCCCcEEEECCCCCchhhccccccccccccccCHHHHHHHHHhhccCCEEEeCCHHHH
Confidence 3455555554431 11 235567899999996543110000 0 0001111112222334456666665542
Q ss_pred hhhcccCC--CCCEEEeCCCCCCcccc-cccCchhhHHHHHHhCCCCCCEEEEEEeccccccc----c--cccHHHHHHH
Q 004092 289 PMMYSAFD--AGNYYVIPGSPAKAWEA-DTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRG----L--WLEHALILRA 359 (774)
Q Consensus 289 ~~i~~~v~--~~ki~vIpg~gvd~~~~-~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~K----g--iKg~~lLLeA 359 (774)
......+. ..++... |.|-...-+ .......++.+++++++++++.+|+|.- -+.... + ......-++.
T Consensus 491 ~~~~~~f~~~~~~i~~~-G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaP-T~r~~~~~~~~~~~~~~~~~~~~ 568 (729)
T 3l7i_A 491 EIFRSAFWMDEERILEI-GYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAP-TWRDDEFVSKGKYLFELKIDLDN 568 (729)
T ss_dssp HHHHHHTCCCGGGEEES-CCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECC-CCCGGGCCGGGSSCCCCTTCHHH
T ss_pred HHHHHHhCCCcceEEEc-CCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEee-eeeCCccccccccccchhhHHHH
Confidence 22223333 2344433 433221111 1111122567889999999999999997 322210 0 0011111333
Q ss_pred HHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCcc
Q 004092 360 LLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFP 439 (774)
Q Consensus 360 ~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp 439 (774)
+..... ++ ..+++-.-|.. .......++.+ .+.......++.++|..||++|.= ++
T Consensus 569 l~~~l~--~~-------~~li~r~Hp~~-------~~~~~~~~~~~-~~~~~~~~~di~~ll~~aD~lITD-------yS 624 (729)
T 3l7i_A 569 LYKELG--DD-------YVILLRMHYLI-------SNALDLSGYEN-FAIDVSNYNDVSELFLISDCLITD-------YS 624 (729)
T ss_dssp HHHHHT--TT-------EEEEECCCHHH-------HTTCCCTTCTT-TEEECTTCSCHHHHHHTCSEEEES-------SC
T ss_pred HHHHcC--CC-------eEEEEecCcch-------hccccccccCC-cEEeCCCCcCHHHHHHHhCEEEee-------ch
Confidence 333221 12 56655442210 00000013444 566555556999999999999853 57
Q ss_pred HHHHHHHHcCCCEEEcCCccccccc----------ccCccEEEEcCCCHHHHHHHHHHHHHc
Q 004092 440 EILVKALCFRKPIIAPDLSNIRKYV----------DDRVNGYLFPKENIKALTHIILQVITN 491 (774)
Q Consensus 440 ~~llEAMA~G~PVIatd~ggi~EiV----------~dg~~G~Lv~~~d~e~La~aI~~Ll~d 491 (774)
.++.|++..++|||-.... ..++. .+..-|.++. |.++|.++|......
T Consensus 625 Sv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~d~~~~~pg~~~~--~~~eL~~~i~~~~~~ 683 (729)
T 3l7i_A 625 SVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYMNYMEDLPGPIYT--EPYGLAKELKNLDKV 683 (729)
T ss_dssp THHHHHGGGCCCEEEECTT-TTTTTSSCCSBSSCTTSSSSSCEES--SHHHHHHHHTTHHHH
T ss_pred HHHHhHHhhCCCEEEecCC-HHHHhhccCCcccChhHhCCCCeEC--CHHHHHHHHhhhhcc
Confidence 7999999999999975221 11111 1112344443 789999999877654
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=87.65 E-value=1.2 Score=46.87 Aligned_cols=139 Identities=12% Similarity=0.076 Sum_probs=77.8
Q ss_pred hCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEE-eCCCCCchHHHHHHHHHHcCCCCc
Q 004092 328 MGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMIL-SGDSTSNYSVVIEAIAHNLHYPLG 406 (774)
Q Consensus 328 lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIv-GG~~~e~Y~~~L~~la~~lgL~~~ 406 (774)
.+..++..+++..|++. ..|.| ..+...+.+..|.+. + ++++++ |++.+. +..+++++ ..++
T Consensus 173 ~~~~~~~~i~l~pga~~-~~k~w-p~~~~~~l~~~L~~~--~-------~~vvl~~g~~~e~---~~~~~i~~--~~~~- 235 (326)
T 2gt1_A 173 LPTDAGEYAVFLHATTR-DDKHW-PEEHWRELIGLLADS--G-------IRIKLPWGAPHEE---ERAKRLAE--GFAY- 235 (326)
T ss_dssp CCTTTTSEEEEECCCSS-GGGSC-CHHHHHHHHHHTTTT--C-------CEEEECCSSHHHH---HHHHHHHT--TCTT-
T ss_pred ccccCCCEEEEEeCCCC-ccccC-CHHHHHHHHHHHHHC--C-------CcEEEecCCHHHH---HHHHHHHh--hCCc-
Confidence 34445566777788553 33333 344566777777543 3 778887 444321 23344444 3333
Q ss_pred cEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccccc-ccCccEEEE-------cCC
Q 004092 407 VVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYV-DDRVNGYLF-------PKE 476 (774)
Q Consensus 407 ~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV-~dg~~G~Lv-------~~~ 476 (774)
+.+.|.. .++..+++.||++|..- .|..=+ |.|+|+|+|+--.+..+... .-+....++ ..=
T Consensus 236 -~~l~g~~sl~el~ali~~a~l~I~~D------SG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I 307 (326)
T 2gt1_A 236 -VEVLPKMSLEGVARVLAGAKFVVSVD------TGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQL 307 (326)
T ss_dssp -EEECCCCCHHHHHHHHHTCSEEEEES------SHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGC
T ss_pred -ccccCCCCHHHHHHHHHhCCEEEecC------CcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCC
Confidence 6677743 88999999999999773 133333 77899999884222111111 011111111 112
Q ss_pred CHHHHHHHHHHHHHc
Q 004092 477 NIKALTHIILQVITN 491 (774)
Q Consensus 477 d~e~La~aI~~Ll~d 491 (774)
++++..+++.++++.
T Consensus 308 ~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 308 TANAVKQFIEENAEK 322 (326)
T ss_dssp CHHHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHHHH
Confidence 577777777777654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 774 | ||||
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 5e-06 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 1e-05 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 0.002 |
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 46.8 bits (109), Expect = 5e-06
Identities = 48/377 (12%), Positives = 105/377 (27%), Gaps = 39/377 (10%)
Query: 160 QLQMVTIAIALREIGYAIQVYSLE-DGRAHEVWRNIGVPVAILQTGREKASFVNWL---- 214
Q + IA + G+ ++VY+ +G + + I VPV A + W+
Sbjct: 16 QRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHL 75
Query: 215 ---NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDW 271
D ++ + + + + V G L Y E
Sbjct: 76 KEHPADRVVGFNKMPGLDVYFAADVCY--AEKVAQEK-GFLYRLTSRYRHYAAFERATFE 132
Query: 272 KKVFNRATVVVFPDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFK 331
+ + ++ + + + ++P + + + R K G K
Sbjct: 133 QGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIK 192
Query: 332 PDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYS 391
++ VG+ F +G+ + L + + + S
Sbjct: 193 EQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRS 252
Query: 392 VVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKP 451
V N L + ++ +L++A+ P
Sbjct: 253 NVHFFSGRNDVSELMAAADL-----------------LLHPAYQEAAGIVLLEAITAGLP 295
Query: 452 IIAPDLSNIRKYVDDRVNGYLF-PKENIKALTHIILQVITNGKISPFARNIASIGRRSVK 510
++ + Y+ D G + + + L ++ + +T SP A R
Sbjct: 296 VLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ---SPLRMAWAENARHYAD 352
Query: 511 NL-------MALETIEG 520
A + I G
Sbjct: 353 TQDLYSLPEKAADIITG 369
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 46.0 bits (107), Expect = 1e-05
Identities = 38/320 (11%), Positives = 96/320 (30%), Gaps = 25/320 (7%)
Query: 220 LVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRAT 279
+V+ + V + + + + +P V+TIH + Y L L + + T
Sbjct: 123 VVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHT 182
Query: 280 VVVFPDYVLPMMYSAFD---------AGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGF 330
D V + G + ++ ++ + D + +
Sbjct: 183 GGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLS 242
Query: 331 KPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNY 390
K + ++L+ + + + ++ +
Sbjct: 243 KFGMDEGVTFMFIGRFDRGQKGVDVLLK-------AIEILSSKKEFQEMRFIIIGKGDPE 295
Query: 391 SVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRK 450
H + V+ M + V + + D VI S+ + F + ++A+C
Sbjct: 296 LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGA 353
Query: 451 PIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVK 510
IA + +R + + G L + L + IL+ + + ++
Sbjct: 354 IPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKALELSR--SDLSKFRENCKKRAM 410
Query: 511 NL----MALETIEGYAMLLE 526
+ A ++ Y ++
Sbjct: 411 SFSWEKSAERYVKAYTGSID 430
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/144 (13%), Positives = 38/144 (26%), Gaps = 16/144 (11%)
Query: 395 EAIAHNLHYPLGVVKHMA-AEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPII 453
+A + V + E + D +I S E + AL + +
Sbjct: 336 ALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFE--PCGLTQLYALRYGCIPV 393
Query: 454 APDLSNIRKYVDD---------RVNGYLFPKENIKALTHIILQVITNGKISPFARNIASI 504
+ V D G F + L I + + + +
Sbjct: 394 VARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKL 453
Query: 505 GRR---SVKNLMALETIEGYAMLL 525
G + S + A Y+ L+
Sbjct: 454 GMKSDVSWEK-SAGLYAALYSQLI 476
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 774 | |||
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.9 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.86 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.86 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.29 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.98 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.86 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.77 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.4 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.91 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.78 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.67 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.62 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.36 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 96.63 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 96.24 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 96.11 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 93.58 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 91.36 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 85.66 |
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-33 Score=300.29 Aligned_cols=339 Identities=14% Similarity=0.161 Sum_probs=241.6
Q ss_pred EEEEecC-CCCChHHHHHHHHHHHHHHcCCeEEEEEcCC-CcchhhhhhcCccEEEccc------------chhHHHHhh
Q 004092 147 LALVFPD-LLIDPQQLQMVTIAIALREIGYAIQVYSLED-GRAHEVWRNIGVPVAILQT------------GREKASFVN 212 (774)
Q Consensus 147 ialV~~~-L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~-~~~~~~~~~~gi~i~~l~~------------~~~l~~~i~ 212 (774)
|+|++.. +..||+|+++..+|++|.++||+|+|+|... ++... ++++..++. ...+...++
T Consensus 2 i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (370)
T d2iw1a1 2 VAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPK-----AFELIQVPVKSHTNHGRNAEYYAWVQNHLK 76 (370)
T ss_dssp EEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCT-----TCEEEECCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHCCCEEEEEecCCCCCCCC-----ceEEEEcCccccccchhhHHHHHHHHHHHH
Confidence 6677753 3479999999999999999999999998643 22111 222222221 112333456
Q ss_pred hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhH---HHhhhhhhhH--HHHHHHH-HH--HhccEEEcc
Q 004092 213 WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRA---RNYASSGQLE--LLNDWKK-VF--NRATVVVFP 284 (774)
Q Consensus 213 ~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~---~k~~~~~~~~--li~~~~~-~~--~~a~~vv~p 284 (774)
..++|+||.+..... ..+. ..+........ .......... ....... .+ ...+.+...
T Consensus 77 ~~~~d~v~~~~~~~~-------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (370)
T d2iw1a1 77 EHPADRVVGFNKMPG-------------LDVY-FAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMML 142 (370)
T ss_dssp HSCCSEEEESSCCTT-------------CSEE-ECCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEES
T ss_pred hcccceeeecccCch-------------HHHH-HHhhcccceeeeeecCccccccchhchhHHHHHHHHhhccCceEEEe
Confidence 689999988765442 1111 11110000000 0000000000 0011111 11 122333333
Q ss_pred CCc-ch--hhcccCCCCCEEEeCCCCCCcccccccC-chhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHH
Q 004092 285 DYV-LP--MMYSAFDAGNYYVIPGSPAKAWEADTNM-DLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRAL 360 (774)
Q Consensus 285 s~~-~~--~i~~~v~~~ki~vIpg~gvd~~~~~~~~-~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~ 360 (774)
+.. .. ......+..++.++|+ |+|...+.... +..++..|..++++++.++++++| ++.+. ||++.+++|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~i~vi~~-gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g-r~~~~---Kg~~~li~a~ 217 (370)
T d2iw1a1 143 TDKQIADFQKHYQTEPERFQILPP-GIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVG-SDFGR---KGVDRSIEAL 217 (370)
T ss_dssp CHHHHHHHHHHHCCCGGGEEECCC-CCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEEC-SCTTT---TTHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCcceEEEEEe-ecccccccccCchhhhhhhhhccCCCccceEEEEEe-ccccc---cchhhhcccc
Confidence 332 11 2233456678899994 77764432222 233678899999999999999999 88888 9999999999
Q ss_pred HHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCcc
Q 004092 361 LPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFP 439 (774)
Q Consensus 361 ~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp 439 (774)
+.+.++.++ ..++++| ++.. +.++++++++++.+ +|.|+|+.+++.++|++||++|+||..| |||
T Consensus 218 ~~l~~~~~~-------~~~~ii~g~~~~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adv~v~ps~~E--~~~ 283 (370)
T d2iw1a1 218 ASLPESLRH-------NTLLFVVGQDKP----RKFEALAEKLGVRS-NVHFFSGRNDVSELMAAADLLLHPAYQE--AAG 283 (370)
T ss_dssp HTSCHHHHH-------TEEEEEESSSCC----HHHHHHHHHHTCGG-GEEEESCCSCHHHHHHHCSEEEECCSCC--SSC
T ss_pred ccccccccc-------ceeeeccccccc----cccccccccccccc-cccccccccccccccccccccccccccc--ccc
Confidence 999998887 7777777 4444 66789999999998 9999999999999999999999999988 899
Q ss_pred HHHHHHHHcCCCEEEcCCcccccccccCccEEEE-cCCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCHHHHH
Q 004092 440 EILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLF-PKENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETI 518 (774)
Q Consensus 440 ~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv-~~~d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~~~~a 518 (774)
++++|||+||+|||+|+.+|.+|++.++.+|+++ +++|+++|+++|.++++| ++.+++|+++|++++++|++..+.
T Consensus 284 ~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d---~~~~~~~~~~ar~~~~~~~~~~~~ 360 (370)
T d2iw1a1 284 IVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ---SPLRMAWAENARHYADTQDLYSLP 360 (370)
T ss_dssp HHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHSCCSCHH
T ss_pred ceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHhChhHHH
Confidence 9999999999999999999999999999999766 678999999999999999 999999999999999888777777
Q ss_pred HHHHHHHH
Q 004092 519 EGYAMLLE 526 (774)
Q Consensus 519 ~~y~~L~e 526 (774)
+.+.++|+
T Consensus 361 ~~~~~ii~ 368 (370)
T d2iw1a1 361 EKAADIIT 368 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88777775
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.6e-33 Score=318.11 Aligned_cols=360 Identities=14% Similarity=0.081 Sum_probs=238.7
Q ss_pred CeEEEEecCCC----CChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhh----------------------hhcCccE
Q 004092 145 PQLALVFPDLL----IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW----------------------RNIGVPV 198 (774)
Q Consensus 145 ~rialV~~~L~----~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~----------------------~~~gi~i 198 (774)
+||++|...+. .||...++..|+++|+++||+|+|+++..+...... ...++++
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence 57999976543 599999999999999999999999985432111000 0112211
Q ss_pred EEccc------------------c-----------hhHHHH----hhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEE
Q 004092 199 AILQT------------------G-----------REKASF----VNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVW 245 (774)
Q Consensus 199 ~~l~~------------------~-----------~~l~~~----i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~ 245 (774)
+.+.. + .....+ +...+|||||+|.+.+......+......++|+|+
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~ 160 (477)
T d1rzua_ 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLL 160 (477)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEE
T ss_pred EEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEE
Confidence 11100 0 001111 12358999999986553222223334567899999
Q ss_pred EEcCchhhhh-----HHHh-------hhhh--hhHHHHHHHHHHHhccEEEccCCcch--h--h--------cccCCCCC
Q 004092 246 TIHEGTLATR-----ARNY-------ASSG--QLELLNDWKKVFNRATVVVFPDYVLP--M--M--------YSAFDAGN 299 (774)
Q Consensus 246 tiHg~~l~~~-----~~k~-------~~~~--~~~li~~~~~~~~~a~~vv~ps~~~~--~--i--------~~~v~~~k 299 (774)
|+|+...... .... .... ....+...+.....++.+...+.... . . .......+
T Consensus 161 t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (477)
T d1rzua_ 161 TIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHV 240 (477)
T ss_dssp EESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGG
T ss_pred EEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhcccc
Confidence 9997321100 0000 0000 00001122233444554444432210 0 0 01112356
Q ss_pred EEEeCCCCCCcccccccCc----------------hhhHHHHHHhCCCC-CCEEEEEEecccccccccccHHHHHHHHHH
Q 004092 300 YYVIPGSPAKAWEADTNMD----------------LYNDTVRVKMGFKP-DDLVIAIVGTQFMYRGLWLEHALILRALLP 362 (774)
Q Consensus 300 i~vIpg~gvd~~~~~~~~~----------------~~k~~lR~~lgl~~-~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~ 362 (774)
+.+|+ +|+|...+.+... ..+..++...++++ +.++|+++| |+.+. ||++.|++|+..
T Consensus 241 ~~vi~-ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vg-rl~~~---KG~~~Ll~a~~~ 315 (477)
T d1rzua_ 241 LHGIV-NGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVIS-RLTWQ---KGIDLMAEAVDE 315 (477)
T ss_dssp EEECC-CCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEES-CBSTT---TTHHHHHTTHHH
T ss_pred EEEEE-CCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEe-eeeec---CCcHHHHHHHHH
Confidence 78888 4777644332111 11345566777765 456899999 89998 999999999999
Q ss_pred chhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCcc
Q 004092 363 LFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFP 439 (774)
Q Consensus 363 L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp 439 (774)
+.+.+ .+++++| |+.. +...+++.+. ++.+ +|.+.+.. +++..+|++||++|+||.+| +||
T Consensus 316 ~~~~~---------~~l~~~G~G~~~--~~~~~~~~~~--~~~~-~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E--~fg 379 (477)
T d1rzua_ 316 IVSLG---------GRLVVLGAGDVA--LEGALLAAAS--RHHG-RVGVAIGYNEPLSHLMQAGCDAIIIPSRFE--PCG 379 (477)
T ss_dssp HHHTT---------CEEEEEECBCHH--HHHHHHHHHH--HTTT-TEEEEESCCHHHHHHHHHHCSEEEECCSCC--SSC
T ss_pred HHhhC---------CeEEEEecCCch--HHHHHHHHHh--hcCC-eEEEEcccChhHHHHHHHhCccccCCcccc--CCC
Confidence 87653 7888999 7543 2344555555 4555 78888755 55677999999999999998 899
Q ss_pred HHHHHHHHcCCCEEEcCCcccccccccCc---------cEEEEcCCCHHHHHHHHHHHHH---cCCCcHHHHHHHHHHHH
Q 004092 440 EILVKALCFRKPIIAPDLSNIRKYVDDRV---------NGYLFPKENIKALTHIILQVIT---NGKISPFARNIASIGRR 507 (774)
Q Consensus 440 ~~llEAMA~G~PVIatd~ggi~EiV~dg~---------~G~Lv~~~d~e~La~aI~~Ll~---d~~~~~~r~~m~~~ar~ 507 (774)
++++||||||+|||+|+.||++|+|.|+. +|++|++.|+++|+++|.++++ | ++.+++|+++|.
T Consensus 380 lv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~---~~~~~~~~~~a~- 455 (477)
T d1rzua_ 380 LTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD---PKLWTQMQKLGM- 455 (477)
T ss_dssp SHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC---HHHHHHHHHHHH-
T ss_pred HHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCC---HHHHHHHHHHHH-
Confidence 99999999999999999999999998875 8999999999999999998776 7 888888988774
Q ss_pred HHHhcCHHHHHHHHHHHHHHHhc
Q 004092 508 SVKNLMALETIEGYAMLLENVLK 530 (774)
Q Consensus 508 ~ak~fs~~~~a~~y~~L~e~ll~ 530 (774)
.++|+|++++++|.++|+++++
T Consensus 456 -~~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 456 -KSDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp -TCCCBHHHHHHHHHHHHHHHTC
T ss_pred -HhhCCHHHHHHHHHHHHHHHhC
Confidence 3579999999999999999874
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=1.7e-32 Score=302.70 Aligned_cols=362 Identities=14% Similarity=0.118 Sum_probs=246.2
Q ss_pred CeEEEEecCC---CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhh------------------hhhcCccEEEccc
Q 004092 145 PQLALVFPDL---LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV------------------WRNIGVPVAILQT 203 (774)
Q Consensus 145 ~rialV~~~L---~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~------------------~~~~gi~i~~l~~ 203 (774)
+||+++.... ..||++.++..|+++|+++||+|+|+++........ ....++++..+..
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGG 80 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEES
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecCc
Confidence 5888988643 359999999999999999999999999644221100 0011222222111
Q ss_pred c---------hh------------------HHHHhh-hcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhh--
Q 004092 204 G---------RE------------------KASFVN-WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLA-- 253 (774)
Q Consensus 204 ~---------~~------------------l~~~i~-~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~-- 253 (774)
. .. +..++. ...||+||+|.+... .+..++. +..++|+|+++|+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~-~~~~~~~-~~~~~~~v~~~h~~~~~~~ 158 (437)
T d2bisa1 81 GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV-FAGALIK-KYFKIPAVFTIHRLNKSKL 158 (437)
T ss_dssp SGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGH-HHHHHHH-HHHCCCEEEEESSCCCCCE
T ss_pred cccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhh-hHhhhhh-ccccCceeEEEeecccccc
Confidence 0 00 001111 246899999988763 5555443 35679999999983211
Q ss_pred --hhHHH-hhhhhh-hHHHHHHHHHHHhccEEEccCCcch---hhcccCCCCCEEEeCCCCCCcccccccCch----h-h
Q 004092 254 --TRARN-YASSGQ-LELLNDWKKVFNRATVVVFPDYVLP---MMYSAFDAGNYYVIPGSPAKAWEADTNMDL----Y-N 321 (774)
Q Consensus 254 --~~~~k-~~~~~~-~~li~~~~~~~~~a~~vv~ps~~~~---~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~----~-k 321 (774)
..... ...... ...+.........++.+...+.... .........++.+|| +|+|...+.+.... . +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~-~g~d~~~~~~~~~~~~~~~~~ 237 (437)
T d2bisa1 159 PAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVF-NGIDCSFWNESYLTGSRDERK 237 (437)
T ss_dssp EHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECC-CCCCTTTSCGGGCCSCHHHHH
T ss_pred chhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEe-cccccccccccccchhhHHHH
Confidence 00000 000000 0001111223344555444333211 111223356889998 47777544332211 1 4
Q ss_pred HHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhh--cccCCCCCCCeEEEEEe-CCCCCchHHHHHHHH
Q 004092 322 DTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSE--VSVENESNSPIKVMILS-GDSTSNYSVVIEAIA 398 (774)
Q Consensus 322 ~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~--~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la 398 (774)
..++.+++..+ +++++++|+...+. ||++.+++|+..+..+ .|+ ++|+|+| |+.. +...++.+.
T Consensus 238 ~~~~~~~~~~~-~~~i~~~G~~~~~~---Kg~~~ll~a~~~~~~~~~~~~-------~~lvi~G~~~~~--~~~~~~~~~ 304 (437)
T d2bisa1 238 KSLLSKFGMDE-GVTFMFIGRFDRGQ---KGVDVLLKAIEILSSKKEFQE-------MRFIIIGKGDPE--LEGWARSLE 304 (437)
T ss_dssp HHHHHHTTCCS-CEEEEEESCBCSSS---SCHHHHHHHHHHHTTSGGGGG-------EEEEEECCBCHH--HHHHHHHHH
T ss_pred HhhhhhhhccC-CceEEEeecccccc---hhHHHHHhhhccccccccccc-------ceeeeecccccc--cccchhhhc
Confidence 45677788754 57899999433456 8999999999987543 466 9999999 6532 234445555
Q ss_pred HHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCC
Q 004092 399 HNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKE 476 (774)
Q Consensus 399 ~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~ 476 (774)
+ ...+ .+.+.|.. +++..++++||++++||..| |+|++++||||||+|||+|+.||..|++.+ .+|+++++.
T Consensus 305 ~--~~~~-~~~~~~~~~~~~~~~~~~~adi~v~~s~~e--~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~ 378 (437)
T d2bisa1 305 E--KHGN-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAG 378 (437)
T ss_dssp H--TCTT-EEEECSCCCHHHHHHHHTTCSEEEECCSCC--SSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTT
T ss_pred c--cccc-ceeccccCcHHHHHHHHhhhcccccccccc--ccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCC
Confidence 5 4555 67777765 77999999999999999998 899999999999999999999999999876 479999999
Q ss_pred CHHHHHHHHHHHHH-cCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Q 004092 477 NIKALTHIILQVIT-NGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKL 531 (774)
Q Consensus 477 d~e~La~aI~~Ll~-d~~~~~~r~~m~~~ar~~ak~fs~~~~a~~y~~L~e~ll~~ 531 (774)
|+++|+++|.++++ + ++.+++|++++++.+++|+|++++++|.++|+++++.
T Consensus 379 d~~~la~~i~~ll~~~---~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r 431 (437)
T d2bisa1 379 DPGELANAILKALELS---RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 431 (437)
T ss_dssp CHHHHHHHHHHHHTTT---TSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCC
T ss_pred CHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999997 6 6788899999999998899999999999999998764
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.90 E-value=4.6e-23 Score=204.57 Aligned_cols=170 Identities=17% Similarity=0.279 Sum_probs=143.4
Q ss_pred hHHHHHHhCCCCCCEEEEEEecccc-cccccccHHHHHHHHHHchhh--cccCCCCCCCeEEEEEe-CCCCCchHHHHHH
Q 004092 321 NDTVRVKMGFKPDDLVIAIVGTQFM-YRGLWLEHALILRALLPLFSE--VSVENESNSPIKVMILS-GDSTSNYSVVIEA 396 (774)
Q Consensus 321 k~~lR~~lgl~~~~~vIl~vGsrl~-~~KgiKg~~lLLeA~~~L~~~--~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~ 396 (774)
+..++++++++ ++++++|+| ++. ++ ||++.+++|++.+.++ +|+ ++|+|+| |+. .+...++.
T Consensus 20 ~~~~~~~~~l~-~~~~il~~G-rl~~~~---Kg~~~li~a~~~l~~~~~~~~-------~~l~i~G~g~~--~~~~~~~~ 85 (196)
T d2bfwa1 20 KKSLLSKFGMD-EGVTFMFIG-RFDRGQ---KGVDVLLKAIEILSSKKEFQE-------MRFIIIGKGDP--ELEGWARS 85 (196)
T ss_dssp HHHHHHHTTCC-SCEEEEEES-CBCSSS---SCHHHHHHHHHHHTTSGGGGG-------EEEEEECCBCH--HHHHHHHH
T ss_pred HHHHHHHhCCC-CCCEEEEEc-CCCccc---cCHHHHHHHHHhhhcccCCCC-------eEEEEEeeccc--chhhhhhh
Confidence 56788999995 666899999 764 57 9999999999998654 566 9999999 642 34445555
Q ss_pred HHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEc
Q 004092 397 IAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFP 474 (774)
Q Consensus 397 la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~ 474 (774)
+.+ .+.+ .+.+.|.. +++..+|+.||++|+||..| |+|.+++|||+||+|||+++.+++.|++.+ .+|++++
T Consensus 86 ~~~--~~~~-~~~~~~~~~~~~l~~~~~~~di~v~ps~~e--~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~ 159 (196)
T d2bfwa1 86 LEE--KHGN-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVK 159 (196)
T ss_dssp HHH--HCTT-EEEECSCCCHHHHHHHHTTCSEEEECCSCC--SSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEEC
T ss_pred hhh--ccce-eEEeeeccccccchhccccccccccccccc--cccccchhhhhcCceeeecCCCccceeecC-CceeeEC
Confidence 555 3455 56777765 68999999999999999998 899999999999999999999999998865 4799999
Q ss_pred CCCHHHHHHHHHHHHH-cCCCcHHHHHHHHHHHHHHHhcC
Q 004092 475 KENIKALTHIILQVIT-NGKISPFARNIASIGRRSVKNLM 513 (774)
Q Consensus 475 ~~d~e~La~aI~~Ll~-d~~~~~~r~~m~~~ar~~ak~fs 513 (774)
++|+++++++|.++++ + ++.+.+|+++|++++++||
T Consensus 160 ~~~~~~l~~~i~~~l~~~---~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 160 AGDPGELANAILKALELS---RSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp TTCHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHhCC
Confidence 9999999999999998 6 6788899999999998886
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=4.8e-21 Score=214.61 Aligned_cols=210 Identities=9% Similarity=0.014 Sum_probs=165.0
Q ss_pred CEEEeCCCCCCcccccccCchh----hHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCC
Q 004092 299 NYYVIPGSPAKAWEADTNMDLY----NDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESN 374 (774)
Q Consensus 299 ki~vIpg~gvd~~~~~~~~~~~----k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~ 374 (774)
++.++| +|+|...+....... ...++.++ .+.++|+++| |+.+. ||++.+++|+.++.+++|+ ..
T Consensus 219 ~v~~~p-~GID~~~~~~~~~~~~~~~~~~l~~~~---~~~~~il~V~-Rld~~---KGi~~~l~A~~~~l~~~p~---~~ 287 (456)
T d1uqta_ 219 RTEVYP-IGIEPKEIAKQAAGPLPPKLAQLKAEL---KNVQNIFSVE-RLDYS---KGLPERFLAYEALLEKYPQ---HH 287 (456)
T ss_dssp EEEECC-CCCCHHHHHHHHHSCCCHHHHHHHHHT---TTCEEEEEEC-CBCGG---GCHHHHHHHHHHHHHHCGG---GT
T ss_pred eeeeec-CcccchhhhhhcccHHHHHHHHHHHhc---CCCeEEEEeC-CCchh---hchHHHHHHHHHHHHhCcc---cc
Confidence 456677 688875543322211 22334443 4678999999 99999 9999999999999999987 33
Q ss_pred CCeEEEEEe-CCCCC--c---hHHHHHHHHHH-------cCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCcc
Q 004092 375 SPIKVMILS-GDSTS--N---YSVVIEAIAHN-------LHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFP 439 (774)
Q Consensus 375 ~~v~LvIvG-G~~~e--~---Y~~~L~~la~~-------lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp 439 (774)
.++.++.+| |...+ + +...+.+++.+ .+..+ .+.+.+.. +++..+|+.||+++.||..| |||
T Consensus 288 ~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~-~v~~~~~~~~~~l~a~~~~Adv~v~~s~~E--G~~ 364 (456)
T d1uqta_ 288 GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTP-LYYLNQHFDRKLLMKIFRYSDVGLVTPLRD--GMN 364 (456)
T ss_dssp TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCS-EEEECSCCCHHHHHHHHHHCSEEEECCSSB--SCC
T ss_pred ccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCc-eeeccCCcCHHHHhHHHhhhceeecCCccC--CCC
Confidence 347888888 43222 2 23333444333 35666 68888755 88999999999999999999 899
Q ss_pred HHHHHHHHcCCC-----EEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHHHhcC
Q 004092 440 EILVKALCFRKP-----IIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKIS-PFARNIASIGRRSVKNLM 513 (774)
Q Consensus 440 ~~llEAMA~G~P-----VIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~-~~r~~m~~~ar~~ak~fs 513 (774)
++++||||||+| ||+|+.+|+.+.+.+ |++|+|.|++++|++|.+++++ + ++++++.+++++.+++|+
T Consensus 365 lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~~---g~lVnP~d~~~~A~ai~~aL~~---~~~er~~~~~~~~~~v~~~~ 438 (456)
T d1uqta_ 365 LVAKEYVAAQDPANPGVLVLSQFAGAANELTS---ALIVNPYDRDEVAAALDRALTM---SLAERISRHAEMLDVIVKND 438 (456)
T ss_dssp HHHHHHHHHSCTTSCCEEEEETTBGGGGTCTT---SEEECTTCHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHhCCCCCCCcEEEeCCCCCHHHhCC---eEEECcCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHCC
Confidence 999999999999 899999999999865 8999999999999999999986 5 567789999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 004092 514 ALETIEGYAMLLENV 528 (774)
Q Consensus 514 ~~~~a~~y~~L~e~l 528 (774)
+...++.+.+-++++
T Consensus 439 ~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 439 INHWQECFISDLKQI 453 (456)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999998888774
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=2.3e-21 Score=187.21 Aligned_cols=152 Identities=16% Similarity=0.128 Sum_probs=123.2
Q ss_pred CEEEEEEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHcCCCCccEEEcc
Q 004092 334 DLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMA 412 (774)
Q Consensus 334 ~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~lgL~~~~V~flG 412 (774)
+..++++| ++.+. ||++.+++|++.+. + .+++|+| +...+.+ +.+.+.+.+. ..+ +|+|+|
T Consensus 12 ~~~~l~iG-rl~~~---K~~~~~i~a~~~l~----~-------~~l~ivg~~~~~~~~-~~~~~~~~~~-~~~-~v~~~g 73 (166)
T d2f9fa1 12 GDFWLSVN-RIYPE---KRIELQLEVFKKLQ----D-------EKLYIVGWFSKGDHA-ERYARKIMKI-APD-NVKFLG 73 (166)
T ss_dssp CSCEEEEC-CSSGG---GTHHHHHHHHHHCT----T-------SCEEEEBCCCTTSTH-HHHHHHHHHH-SCT-TEEEEE
T ss_pred CCEEEEEe-cCccc---cCHHHHHHHHHHhc----C-------CeEEEEEecccccch-hhhhhhhccc-ccC-cEEEee
Confidence 34678999 89998 99999999998874 3 6889999 6655444 3344444433 345 799999
Q ss_pred Cc--ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcccccccccCccEEEEcCCCHHHHHHHHHHHHH
Q 004092 413 AE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVIT 490 (774)
Q Consensus 413 ~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~ 490 (774)
++ +++..+|+.||++|+||..| |+|++++|||+||+|||+|+.++..|++.++.+|++++. |+++++++|.++++
T Consensus 74 ~~~~~~~~~~~~~ad~~i~ps~~e--~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~~ 150 (166)
T d2f9fa1 74 SVSEEELIDLYSRCKGLLCTAKDE--DFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVSK 150 (166)
T ss_dssp SCCHHHHHHHHHHCSEEEECCSSC--CSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccc--cccccccccccccccceeecCCcceeeecCCcccccCCC-CHHHHHHHHHHHHh
Confidence 87 77999999999999999998 899999999999999999999999999999999998875 89999999999999
Q ss_pred cCCCcHHHHHHHHHHHHHHHhc
Q 004092 491 NGKISPFARNIASIGRRSVKNL 512 (774)
Q Consensus 491 d~~~~~~r~~m~~~ar~~ak~f 512 (774)
| ++.. .+++.+.+++|
T Consensus 151 ~---~~~~---~~~~~~~a~~f 166 (166)
T d2f9fa1 151 N---PDKF---KKDCFRRAKEF 166 (166)
T ss_dssp C---TTTT---HHHHHHHHHTC
T ss_pred C---HHHH---HHHHHHHHhCC
Confidence 9 6532 33344444443
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.29 E-value=2.7e-10 Score=119.68 Aligned_cols=318 Identities=12% Similarity=0.070 Sum_probs=176.3
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccc--------------------
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG-------------------- 204 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~-------------------- 204 (774)
+||++..+ +.||--..+..++++|.++||+|.+++..++.........++++..++..
T Consensus 1 kkili~~~--GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (351)
T d1f0ka_ 1 KRLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNA 78 (351)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHH
T ss_pred CEEEEEcC--CcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccCCcEEEEECCCcCCCCHHHHHHHHHHHHHh
Confidence 46666654 34677778899999999999999999876654444455556665544321
Q ss_pred -hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEc
Q 004092 205 -REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVF 283 (774)
Q Consensus 205 -~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ 283 (774)
.....++...++|++.+...... ......+ ...++|++...+...... .. +.....++.+..
T Consensus 79 ~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~a-~~~~ip~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~ 141 (351)
T d1f0ka_ 79 WRQARAIMKAYKPDVVLGMGGYVS-GPGGLAA-WSLGIPVVLHEQNGIAGL-TN--------------KWLAKIATKVMQ 141 (351)
T ss_dssp HHHHHHHHHHHCCSEEEECSSTTH-HHHHHHH-HHTTCCEEEEECSSSCCH-HH--------------HHHTTTCSEEEE
T ss_pred HHHHHHHhhccccceeeecccchh-hhhhhhh-hhcccceeecccccccch-hH--------------HHhhhhcceeec
Confidence 11222355589999887655442 2222222 245689887766421110 00 001112222111
Q ss_pred cCCcchhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHc
Q 004092 284 PDYVLPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPL 363 (774)
Q Consensus 284 ps~~~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L 363 (774)
. .... ......+. .+.... .... .....+.....++..++.+|+..... .-.+.+.+.+..+
T Consensus 142 ~-------~~~~-~~~~~~~~-~~~~~~---~~~~---~~~~~~~~~~~~~~~i~~~~gs~g~~---~~~~~~~~~~~~l 203 (351)
T d1f0ka_ 142 A-------FPGA-FPNAEVVG-NPVRTD---VLAL---PLPQQRLAGREGPVRVLVVGGSQGAR---ILNQTMPQVAAKL 203 (351)
T ss_dssp S-------STTS-SSSCEECC-CCCCHH---HHTS---CCHHHHHTTCCSSEEEEEECTTTCCH---HHHHHHHHHHHHH
T ss_pred c-------cccc-ccceeEEc-CCcccc---cccc---hhHHhhhhcccCCcccccccccchhh---hhHHHHHHhhhhh
Confidence 1 0000 11112222 122210 0000 01123445566666777777554442 3334445555555
Q ss_pred hhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHH
Q 004092 364 FSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILV 443 (774)
Q Consensus 364 ~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~ll 443 (774)
... ...+++++.... ......... .... ++...++.+++.++|+.||++|.-+ -+.++.
T Consensus 204 ~~~----------~~~i~~~~~~~~--~~~~~~~~~--~~~~-~~~v~~f~~~~~~lm~~adl~It~~------G~~T~~ 262 (351)
T d1f0ka_ 204 GDS----------VTIWHQSGKGSQ--QSVEQAYAE--AGQP-QHKVTEFIDDMAAAYAWADVVVCRS------GALTVS 262 (351)
T ss_dssp GGG----------EEEEEECCTTCH--HHHHHHHHH--TTCT-TSEEESCCSCHHHHHHHCSEEEECC------CHHHHH
T ss_pred ccc----------ceeeeeccccch--hhhhhhhcc--cccc-cceeeeehhhHHHHHHhCchhhccc------cchHHH
Confidence 432 344455543321 111222222 3444 6888899999999999999998654 357899
Q ss_pred HHHHcCCCEEEcCCccc-------ccccccCccEEEEcCC--CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcCH
Q 004092 444 KALCFRKPIIAPDLSNI-------RKYVDDRVNGYLFPKE--NIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMA 514 (774)
Q Consensus 444 EAMA~G~PVIatd~ggi-------~EiV~dg~~G~Lv~~~--d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs~ 514 (774)
||+++|+|+|..+.... .+.+.+...|+.++.. +.+.+.++|..+ + ++.+.+|++++++....-.+
T Consensus 263 Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~---~~~~~~~~~~~~~~~~~~~a 337 (351)
T d1f0ka_ 263 EIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--S---RETLLTMAERARAASIPDAT 337 (351)
T ss_dssp HHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--C---HHHHHHHHHHHHHTCCTTHH
T ss_pred HHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhh--C---HHHHHHHHHHHHccCCccHH
Confidence 99999999998765321 2344444458777643 467788877765 4 56777898888866544445
Q ss_pred HHHHHHHHHHH
Q 004092 515 LETIEGYAMLL 525 (774)
Q Consensus 515 ~~~a~~y~~L~ 525 (774)
+++++..+++.
T Consensus 338 ~~i~~~i~~l~ 348 (351)
T d1f0ka_ 338 ERVANEVSRVA 348 (351)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55665555543
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.98 E-value=4e-08 Score=103.76 Aligned_cols=82 Identities=10% Similarity=-0.014 Sum_probs=64.8
Q ss_pred CCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc--------cccccccCccEEEE
Q 004092 402 HYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN--------IRKYVDDRVNGYLF 473 (774)
Q Consensus 402 gL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg--------i~EiV~dg~~G~Lv 473 (774)
...+ +|.+.++. +...++..+|++|..+ -.++++|||++|+|+|+.+..+ ..+.+.+...|+.+
T Consensus 267 ~~~~-~v~i~~~~-p~~~ll~~a~~~v~hg------G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l 338 (391)
T d1pn3a_ 267 DDGA-DCFVVGEV-NLQELFGRVAAAIHHD------SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAV 338 (391)
T ss_dssp SCCT-TCCEESSC-CHHHHHTTSSCEEEES------CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEE
T ss_pred cCCC-CEEEeccc-CHHHHHhhccEEEecC------chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEc
Confidence 3455 79999998 4678899999999775 3468999999999999987654 24456555569988
Q ss_pred cCCC--HHHHHHHHHHHHHc
Q 004092 474 PKEN--IKALTHIILQVITN 491 (774)
Q Consensus 474 ~~~d--~e~La~aI~~Ll~d 491 (774)
+..+ +++|+++|.+++++
T Consensus 339 ~~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 339 DGPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp CCSSCCHHHHHHHHHHHTST
T ss_pred CcCCCCHHHHHHHHHHHhCH
Confidence 7754 89999999999955
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.86 E-value=9e-08 Score=101.35 Aligned_cols=82 Identities=10% Similarity=-0.023 Sum_probs=65.7
Q ss_pred CCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCC-
Q 004092 402 HYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKE- 476 (774)
Q Consensus 402 gL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~- 476 (774)
.+++ +|.+.++. +...++..+|++|.- |-.+++.|||++|+|+|+.+..+ ..+.+++...|+.++..
T Consensus 283 ~~~~-~v~~~~~~-p~~~ll~~~~~~I~h------gG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~ 354 (401)
T d1rrva_ 283 DDRD-DCFAIDEV-NFQALFRRVAAVIHH------GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT 354 (401)
T ss_dssp CCCT-TEEEESSC-CHHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSC
T ss_pred cCCC-CEEEEecc-CcHHHhhhccEEEec------CCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCC
Confidence 4566 89999998 467788999999952 56789999999999999988776 34455555569888875
Q ss_pred -CHHHHHHHHHHHHHc
Q 004092 477 -NIKALTHIILQVITN 491 (774)
Q Consensus 477 -d~e~La~aI~~Ll~d 491 (774)
+++.|+++|.+++++
T Consensus 355 ~~~~~L~~ai~~vl~~ 370 (401)
T d1rrva_ 355 PTFESLSAALTTVLAP 370 (401)
T ss_dssp CCHHHHHHHHHHHTSH
T ss_pred CCHHHHHHHHHHHhCH
Confidence 489999999999944
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.77 E-value=7.2e-07 Score=93.75 Aligned_cols=96 Identities=9% Similarity=-0.049 Sum_probs=71.4
Q ss_pred CCCCccEEEccCcccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCcc----cccccccCccEEEEcCC-
Q 004092 402 HYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSN----IRKYVDDRVNGYLFPKE- 476 (774)
Q Consensus 402 gL~~~~V~flG~~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~gg----i~EiV~dg~~G~Lv~~~- 476 (774)
.+++ +|.+.++.+ ...+|..+|++|.- |..+++.|||++|+|+|+.+..+ ..+.+.+...|+.++..
T Consensus 282 ~~~~-nv~~~~~~p-~~~~l~~~~~~V~h------gG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~ 353 (401)
T d1iira_ 282 DDGA-DCFAIGEVN-HQVLFGRVAAVIHH------GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPI 353 (401)
T ss_dssp SCGG-GEEECSSCC-HHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSS
T ss_pred cCCC-CEEEEeccC-HHHHHhhcCEEEec------CCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCC
Confidence 4555 899999984 57889999999942 57889999999999999976654 33445554569888775
Q ss_pred -CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhcC
Q 004092 477 -NIKALTHIILQVITNGKISPFARNIASIGRRSVKNLM 513 (774)
Q Consensus 477 -d~e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~fs 513 (774)
++++|+++|.+++++ + +.+++++.++++.
T Consensus 354 ~~~~~l~~ai~~~l~~----~----~~~~a~~~~~~~~ 383 (401)
T d1iira_ 354 PTFDSLSAALATALTP----E----THARATAVAGTIR 383 (401)
T ss_dssp CCHHHHHHHHHHHTSH----H----HHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHhCH----H----HHHHHHHHHHHHH
Confidence 699999999999954 3 3344555555443
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.40 E-value=1.2e-06 Score=93.81 Aligned_cols=312 Identities=11% Similarity=0.087 Sum_probs=174.4
Q ss_pred eEEEEecCCCCChHHHHHHHHHHHHHHc-CCeEEEEEcCCC--cchhhhhhcCccEE-Eccc---c-----------hhH
Q 004092 146 QLALVFPDLLIDPQQLQMVTIAIALREI-GYAIQVYSLEDG--RAHEVWRNIGVPVA-ILQT---G-----------REK 207 (774)
Q Consensus 146 rialV~~~L~~GG~e~~v~~Lak~L~~~-G~eV~V~t~~~~--~~~~~~~~~gi~i~-~l~~---~-----------~~l 207 (774)
||++|++. =+.-..+..+.++|++. ++++.++..+.- .........++... .+.. . ..+
T Consensus 4 kI~~v~Gt---R~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~~~~~ 80 (373)
T d1v4va_ 4 RVVLAFGT---RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQA 80 (373)
T ss_dssp EEEEEECS---HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHH
T ss_pred eEEEEEEh---hHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchhcCCCccccCCCCCCCCCHHHHHHHHHHHH
Confidence 67777763 12233456688888764 788888776531 11222333343311 1111 1 124
Q ss_pred HHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCCc
Q 004092 208 ASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV 287 (774)
Q Consensus 208 ~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~~ 287 (774)
.+++...+||+|+++.-... .++..++....++|++ ++|+...-... .....+. ..+........+.|+...
T Consensus 81 ~~~l~~~kPD~vlv~GDr~e-~la~a~aa~~~~ipi~-HiegG~rsg~~---~~~~~de---~~R~~iskls~~hf~~t~ 152 (373)
T d1v4va_ 81 ARALKEMGADYVLVHGDTLT-TFAVAWAAFLEGIPVG-HVEAGLRSGNL---KEPFPEE---ANRRLTDVLTDLDFAPTP 152 (373)
T ss_dssp HHHHHHTTCSEEEEESSCHH-HHHHHHHHHHTTCCEE-EETCCCCCSCT---TSSTTHH---HHHHHHHHHCSEEEESSH
T ss_pred hhhhhhcCcccccccccCcc-chhHHHHHHHhhhhhe-eeccccccccc---ccCcchh---hhhhhhccccceeeecch
Confidence 45577799999999988774 4443333346678976 45652111000 0000011 112222222223333322
Q ss_pred ---chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhCCCCCCEEEEEEecccccccccccHHHHHHHHHHch
Q 004092 288 ---LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLF 364 (774)
Q Consensus 288 ---~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lgl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~ 364 (774)
-..+..+.+..+++++-+..+|.. ... ....+.....+.++++++++- +.... +....+++++..+.
T Consensus 153 ~~~~~L~~~Ge~~~~I~~vG~p~~D~i-----~~~-~~~~~~~~~~~~~~~~lvt~h-r~~n~---~~~~~~~~~~~~~~ 222 (373)
T d1v4va_ 153 LAKANLLKEGKREEGILVTGQTGVDAV-----LLA-AKLGRLPEGLPEGPYVTVTMH-RRENW---PLLSDLAQALKRVA 222 (373)
T ss_dssp HHHHHHHTTTCCGGGEEECCCHHHHHH-----HHH-HHHCCCCTTCCSSCEEEECCC-CGGGG---GGHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccccceeecccchhhHH-----Hhh-hhhcccccccccccceeEEec-ccccc---chHHHHHHHHHHHh
Confidence 234455666677777653223320 000 000111223445566666666 54443 66777788888887
Q ss_pred hhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCCccHHH
Q 004092 365 SEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEIL 442 (774)
Q Consensus 365 ~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qGfp~~l 442 (774)
+...+ +.+++...+. ...... ..+.+.... ++.++... .+...+++.|++++--| |..+
T Consensus 223 ~~~~~-------~~~i~p~~~~-~~~~~~---~~~~~~~~~-n~~~~~~l~~~~~l~ll~~s~~vignS-------ssgi 283 (373)
T d1v4va_ 223 EAFPH-------LTFVYPVHLN-PVVREA---VFPVLKGVR-NFVLLDPLEYGSMAALMRASLLLVTDS-------GGLQ 283 (373)
T ss_dssp HHCTT-------SEEEEECCSC-HHHHHH---HHHHHTTCT-TEEEECCCCHHHHHHHHHTEEEEEESC-------HHHH
T ss_pred hhccc-------ceeeeeeccc-ccchhh---hhhhhcccc-cceeeccchHHHHHHHhhhceeEeccc-------chhh
Confidence 77666 6666655332 112222 222233334 68888866 67788899999999665 5677
Q ss_pred HHHHHcCCCEEEc-CCcccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHHH
Q 004092 443 VKALCFRKPIIAP-DLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIA 502 (774)
Q Consensus 443 lEAMA~G~PVIat-d~ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m~ 502 (774)
.||.++|+|||.- +.+.-++-+..|.+ .+++ .|.+++.++|..++.+ +..+.+|.
T Consensus 284 ~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv~-~d~~~I~~~i~~~l~~---~~~~~~~~ 339 (373)
T d1v4va_ 284 EEGAALGVPVVVLRNVTERPEGLKAGIL-KLAG-TDPEGVYRVVKGLLEN---PEELSRMR 339 (373)
T ss_dssp HHHHHTTCCEEECSSSCSCHHHHHHTSE-EECC-SCHHHHHHHHHHHHTC---HHHHHHHH
T ss_pred hcchhhcCcEEEeCCCccCHHHHhcCee-EEcC-CCHHHHHHHHHHHHcC---HHHHhhcc
Confidence 8999999999987 55666676766654 4554 4899999999999999 76666553
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.91 E-value=0.00011 Score=78.01 Aligned_cols=316 Identities=11% Similarity=0.090 Sum_probs=160.9
Q ss_pred CCCeEEEEecCCCCChHHHHHHHHHHHHHHc-CCeEEEEEcCC-Cc-chhhhhhcCccE-EEccc--c------------
Q 004092 143 RKPQLALVFPDLLIDPQQLQMVTIAIALREI-GYAIQVYSLED-GR-AHEVWRNIGVPV-AILQT--G------------ 204 (774)
Q Consensus 143 rk~rialV~~~L~~GG~e~~v~~Lak~L~~~-G~eV~V~t~~~-~~-~~~~~~~~gi~i-~~l~~--~------------ 204 (774)
+|++|++|++. =+.-.-+..+.++|.+. +.++.++..+. .+ .......+++.. ..+.. .
T Consensus 1 ~k~Ki~~v~Gt---R~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i 77 (377)
T d1o6ca_ 1 KKLKVMTVFGT---RPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNAL 77 (377)
T ss_dssp CCEEEEEEECS---HHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHH
T ss_pred CCceEEEEEEc---hHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhcCCCCceeeecCCCCCCHHHHHHHHH
Confidence 46788888863 22333456678888775 57888777543 11 122233444321 11111 1
Q ss_pred hhHHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEcc
Q 004092 205 REKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFP 284 (774)
Q Consensus 205 ~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~p 284 (774)
..+...+...+||+|+++.-... .++..++....++|++ ++|+...-+.. .....+. ..+........+.|+
T Consensus 78 ~~~~~~~~~~kpD~v~v~GDr~e-~la~a~aa~~~~Ipi~-HiegG~~s~~~---~~~~~de---~~R~~iskls~~hf~ 149 (377)
T d1o6ca_ 78 VRLDELFKDIKPDIVLVHGDTTT-TFAGSLAAFYHQIAVG-HVEAGLRTGNK---YSPFPEE---LNRQMTGAIADLHFA 149 (377)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHH-HHHHHHHHHHTTCEEE-EESCCCCCSCT---TTTTTHH---HHHHHHHHHCSEEEE
T ss_pred HhhhhhhhhcccceeEeeecccc-cchhhhhhhhccceEE-EEecccccccc---cccCchh---hhccccccceeEEee
Confidence 12344566789999999988774 4444433446788985 46652211000 0000011 112222222233343
Q ss_pred CCc---chhhcccCCCCCEEEeCCCCCCcccccccCchhhHHHHHHhC-CCCCCEEEEEEecccccccccccHHHHHHHH
Q 004092 285 DYV---LPMMYSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMG-FKPDDLVIAIVGTQFMYRGLWLEHALILRAL 360 (774)
Q Consensus 285 s~~---~~~i~~~v~~~ki~vIpg~gvd~~~~~~~~~~~k~~lR~~lg-l~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~ 360 (774)
+.. -.++..+.+..+++++-+..+|.... ...... ....+. ...++++++++- +.... -+.....+.++
T Consensus 150 ~t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~~--~~~~~~--~~~~~~~~~~~~~ilvt~H-r~~~~--~~~~~~~~~~~ 222 (377)
T d1o6ca_ 150 PTGQAKDNLLKENKKADSIFVTGNTAIDALNT--TVRDGY--SHPVLDQVGEDKMILLTAH-RRENL--GEPMENMFKAI 222 (377)
T ss_dssp SSHHHHHHHHHTTCCGGGEEECCCHHHHHHHH--HCCSSC--CCSTTTTTTTSEEEEECC-------------HHHHHHH
T ss_pred cchhhhhhhhhhccccceEeeccchhHHHHHH--HHHHHH--hhhhhhhccCCceEEEEec-ccccc--ccchHHHHHHH
Confidence 333 33445566677787776444443110 000000 000111 223344444444 33221 02334455666
Q ss_pred HHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHH-HHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCcCC
Q 004092 361 LPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIA-HNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQT 437 (774)
Q Consensus 361 ~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la-~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~qG 437 (774)
..+....++ +.+++...+.. ...... +.+...+ +|.++... .+...+++.|+++|.=|
T Consensus 223 ~~~~~~~~~-------~~~i~~~~~~~-----~~~~~~~~~~~~~~-ni~~~~~l~~~~fl~llk~s~~vIgnS------ 283 (377)
T d1o6ca_ 223 RRIVGEFED-------VQVVYPVHLNP-----VVREAAHKHFGDSD-RVHLIEPLEVIDFHNFAAKSHFILTDS------ 283 (377)
T ss_dssp HHHHHHCTT-------EEEEEC----C-----HHHHHHHHC--CCS-SEEECCCCCHHHHHHHHHHCSEEEEC-------
T ss_pred Hhhcccccc-------ccccccccccc-----ccchhhhhcccccc-ceEeccccchHHHHHHHhhhheeeccc------
Confidence 555555554 55544443322 122222 3233444 79999876 68889999999999655
Q ss_pred ccHHHHHHHHcCCCEEEcCC-cccccccccCccEEEEcCCCHHHHHHHHHHHHHcCCCcHHHHHH
Q 004092 438 FPEILVKALCFRKPIIAPDL-SNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNI 501 (774)
Q Consensus 438 fp~~llEAMA~G~PVIatd~-ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d~~~~~~r~~m 501 (774)
|..+.||-.+|+|+|.-.. +.-++.+..|. -++++. |.+++.+++..++.+ +...+.+
T Consensus 284 -ss~i~Ea~~lg~P~Inir~~tERqe~~~~g~-nilv~~-~~~~I~~~i~~~l~~---~~~~~~~ 342 (377)
T d1o6ca_ 284 -GGVQEEAPSLGKPVLVLRDTTERPEGVEAGT-LKLAGT-DEENIYQLAKQLLTD---PDEYKKM 342 (377)
T ss_dssp --CHHHHGGGGTCCEEEECSCCC---CTTTTS-SEEECS-CHHHHHHHHHHHHHC---HHHHHHH
T ss_pred -chhHHhhhhhhceEEEeCCCCcCcchhhcCe-eEECCC-CHHHHHHHHHHHHhC---hHHHhhh
Confidence 3457799999999998643 33455665554 356665 889999999999998 6655544
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.78 E-value=0.00056 Score=72.47 Aligned_cols=312 Identities=12% Similarity=0.088 Sum_probs=168.0
Q ss_pred CeEEEEecCCCCChHHHHHHHHHHHHHHc-CCeEEEEEcCCC-c-chhhhhhcCccE-EEccc----c----------hh
Q 004092 145 PQLALVFPDLLIDPQQLQMVTIAIALREI-GYAIQVYSLEDG-R-AHEVWRNIGVPV-AILQT----G----------RE 206 (774)
Q Consensus 145 ~rialV~~~L~~GG~e~~v~~Lak~L~~~-G~eV~V~t~~~~-~-~~~~~~~~gi~i-~~l~~----~----------~~ 206 (774)
+||++|++. =+.-.-+..+.+.|++. +.++.++..+.- + .....+..++.. ..+.. . ..
T Consensus 1 MKi~~v~Gt---R~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 77 (376)
T d1f6da_ 1 MKVLTVFGT---RPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEG 77 (376)
T ss_dssp CEEEEEECS---HHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHHHHHH
T ss_pred CeEEEEEEh---hHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCCCcccccCCCCCCHHHHHHHHHHh
Confidence 356666652 22233456678888775 589988876532 2 122233333321 11111 0 12
Q ss_pred HHHHhhhcCccEEEEcCCchhHHHHHHHhCCCCCCCEEEEEcCchhhhhHHHhhhhhhhHHHHHHHHHHHhccEEEccCC
Q 004092 207 KASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDY 286 (774)
Q Consensus 207 l~~~i~~~~~DIIhvhs~~~~~~l~~Ll~~~~~~ipvI~tiHg~~l~~~~~k~~~~~~~~li~~~~~~~~~a~~vv~ps~ 286 (774)
+...+...+||+|+++.-... .++..++....++|++ ++|+...-... ...+.+. ..+.+......+.|++.
T Consensus 78 ~~~~~~~~kPD~v~v~GDr~e-~la~a~aa~~~~ipi~-HiegG~~s~~~---~~~~pde---~~R~~iskls~~hf~~~ 149 (376)
T d1f6da_ 78 LKPILAEFKPDVVLVHGDTTT-TLATSLAAFYQRIPVG-HVEAGLRTGDL---YSPWPEE---ANRTLTGHLAMYHFSPT 149 (376)
T ss_dssp HHHHHHHHCCSEEEEETTCHH-HHHHHHHHHTTTCCEE-EESCCCCCSCT---TSSTTHH---HHHHHHHHTCSEEEESS
T ss_pred hHHHHHhccCcceeeeccccc-hhhHHHHHHhhCceEE-EEecccccccc---cccCchh---hhhhhhccceeEEEecc
Confidence 344566789999999987773 5555444457789976 57762211000 0000111 12333333334445443
Q ss_pred c---chhhcccCCCCCEEEeCCCCCCcccc--c-ccCchh-hHH-HHHHhCCCCCCEE-EEEEecccccccccccHHHHH
Q 004092 287 V---LPMMYSAFDAGNYYVIPGSPAKAWEA--D-TNMDLY-NDT-VRVKMGFKPDDLV-IAIVGTQFMYRGLWLEHALIL 357 (774)
Q Consensus 287 ~---~~~i~~~v~~~ki~vIpg~gvd~~~~--~-~~~~~~-k~~-lR~~lgl~~~~~v-Il~vGsrl~~~KgiKg~~lLL 357 (774)
. -..+..+.+..+++++-+..+|.... . ...... ... .........+..+ ++++-..-... +....++
T Consensus 150 ~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~---~~~~~i~ 226 (376)
T d1f6da_ 150 ETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFG---RGFEEIC 226 (376)
T ss_dssp HHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCC---HHHHHHH
T ss_pred HHHHhHHHhcCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhhh---hhHHHHH
Confidence 3 34556677778888876544443110 0 000000 111 1112223333434 44433222223 5567778
Q ss_pred HHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHHHcCCCCccEEEccCc--ccHHHHHHHcCEEEEcCccCc
Q 004092 358 RALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEE 435 (774)
Q Consensus 358 eA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~~lgL~~~~V~flG~~--~dl~~~l~aaDI~V~PS~~E~ 435 (774)
.++..+.+...+ +.+++--.+.. ... ....+.+.... ++.++... .+...+++.|++++--|
T Consensus 227 ~~l~~~~~~~~~-------~~ii~p~~~~~-~~~---~~~~~~~~~~~-ni~~~~~l~~~~fl~ll~~a~~vignS---- 290 (376)
T d1f6da_ 227 HALADIATTHQD-------IQIVYPVHLNP-NVR---EPVNRILGHVK-NVILIDPQEYLPFVWLMNHAWLILTDS---- 290 (376)
T ss_dssp HHHHHHHHHCTT-------EEEEEECCBCH-HHH---HHHHHHHTTCT-TEEEECCCCHHHHHHHHHHCSEEEESS----
T ss_pred HHHhhhhhhcce-------eEEecccccch-hhh---hhHhhhhcccc-cceeeccccHHHHHHHHhhceEEEecC----
Confidence 888877766555 66655543321 111 12222233444 68888765 67778999999999766
Q ss_pred CCccHHHHHHHHcCCCEEEcCC-cccccccccCccEEEEcCCCHHHHHHHHHHHHHc
Q 004092 436 QTFPEILVKALCFRKPIIAPDL-SNIRKYVDDRVNGYLFPKENIKALTHIILQVITN 491 (774)
Q Consensus 436 qGfp~~llEAMA~G~PVIatd~-ggi~EiV~dg~~G~Lv~~~d~e~La~aI~~Ll~d 491 (774)
|..+.||-.+|+|||.-.. ..-++-+..+ +-+++++ |.+++.+++.+++.+
T Consensus 291 ---ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~-~~~~I~~ai~~~l~~ 342 (376)
T d1f6da_ 291 ---GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKD 342 (376)
T ss_dssp ---SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCS-SHHHHHHHHHHHHHC
T ss_pred ---cchHhhHHHhCCCEEEcCCCccCccceecC-eeEECCC-CHHHHHHHHHHHHhC
Confidence 3455699999999996522 2234555444 3456654 899999999999998
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.67 E-value=0.0054 Score=64.49 Aligned_cols=79 Identities=8% Similarity=-0.047 Sum_probs=54.7
Q ss_pred cEEEccCcccH-HHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----ccc-cccCccEEEEcC-----
Q 004092 407 VVKHMAAEGDV-DSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKY-VDDRVNGYLFPK----- 475 (774)
Q Consensus 407 ~V~flG~~~dl-~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~Ei-V~dg~~G~Lv~~----- 475 (774)
++.+..+..+. .-.+..+|+||.= |--+++.||+.+|+|+|+.+..+= ..- ++....|+-++.
T Consensus 331 n~~v~~~~pq~~~l~~p~~~~fItH------GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~ 404 (461)
T d2acva1 331 KGMICGWAPQVEVLAHKAIGGFVSH------CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKG 404 (461)
T ss_dssp SEEEESSCCHHHHHHSTTEEEEEEC------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTT
T ss_pred CeEEEecCCHHHHHhcccCCEEEec------CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecccccc
Confidence 56666655222 2245788999853 457789999999999999765432 233 344445877764
Q ss_pred ---CCHHHHHHHHHHHHHc
Q 004092 476 ---ENIKALTHIILQVITN 491 (774)
Q Consensus 476 ---~d~e~La~aI~~Ll~d 491 (774)
-++++++++|.++|++
T Consensus 405 ~~~~t~~~l~~a~~~vl~~ 423 (461)
T d2acva1 405 SDVVAAEEIEKGLKDLMDK 423 (461)
T ss_dssp CCCCCHHHHHHHHHHHTCT
T ss_pred CCccCHHHHHHHHHHHhhC
Confidence 2689999999999965
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.62 E-value=0.0059 Score=64.33 Aligned_cols=94 Identities=12% Similarity=0.092 Sum_probs=67.2
Q ss_pred cEEEccCcccHHHHH--HHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----cccc-ccCccEEEEcCC-CH
Q 004092 407 VVKHMAAEGDVDSVL--NTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKYV-DDRVNGYLFPKE-NI 478 (774)
Q Consensus 407 ~V~flG~~~dl~~~l--~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~EiV-~dg~~G~Lv~~~-d~ 478 (774)
||.+..+.. ...+| ..+++||.= |-.+++.||+.+|+|+|+.+..+= ...+ +....|+.++.. +.
T Consensus 347 Nv~~~~~~P-q~~lL~hp~~~~fItH------GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~ 419 (473)
T d2pq6a1 347 RGLIASWCP-QDKVLNHPSIGGFLTH------CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKR 419 (473)
T ss_dssp TEEEESCCC-HHHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCH
T ss_pred ceEEeeeCC-HHHHhcCCcCcEEEec------CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCCCcCH
Confidence 799988874 34466 577888842 557889999999999999876532 2334 442458887753 79
Q ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHh
Q 004092 479 KALTHIILQVITNGKISPFARNIASIGRRSVKN 511 (774)
Q Consensus 479 e~La~aI~~Ll~d~~~~~~r~~m~~~ar~~ak~ 511 (774)
++++++|.++++| +. .+++.++|.+..+.
T Consensus 420 ~~l~~ai~~vl~d---~~-~~~~r~~a~~l~~~ 448 (473)
T d2pq6a1 420 EELAKLINEVIAG---DK-GKKMKQKAMELKKK 448 (473)
T ss_dssp HHHHHHHHHHHTS---HH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC---Ch-HHHHHHHHHHHHHH
Confidence 9999999999999 65 24566666665543
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.36 E-value=0.0064 Score=64.09 Aligned_cols=78 Identities=13% Similarity=0.026 Sum_probs=58.0
Q ss_pred cEEEccCcccHHHHH--HHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----cccc-ccCccEEEEcCC--C
Q 004092 407 VVKHMAAEGDVDSVL--NTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKYV-DDRVNGYLFPKE--N 477 (774)
Q Consensus 407 ~V~flG~~~dl~~~l--~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~EiV-~dg~~G~Lv~~~--d 477 (774)
+|.+..+..+. .++ ..+++||.- |-.+++.||+.+|+|+|+.+..+= ...+ +....|+.++.+ +
T Consensus 320 nv~~~~~~pq~-~lL~hp~~~~fItH------GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t 392 (450)
T d2c1xa1 320 YGMVVPWAPQA-EVLAHEAVGAFVTH------CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFT 392 (450)
T ss_dssp TEEEESCCCHH-HHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCC
T ss_pred cccccccCChH-hhhccCceeEEEcc------CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCcC
Confidence 68888877444 355 567777743 457789999999999999876642 2334 343568888764 6
Q ss_pred HHHHHHHHHHHHHc
Q 004092 478 IKALTHIILQVITN 491 (774)
Q Consensus 478 ~e~La~aI~~Ll~d 491 (774)
.+++.++|.++|+|
T Consensus 393 ~~~l~~ai~~vL~d 406 (450)
T d2c1xa1 393 KSGLMSCFDQILSQ 406 (450)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999999999
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=96.63 E-value=0.055 Score=54.83 Aligned_cols=114 Identities=11% Similarity=0.138 Sum_probs=70.8
Q ss_pred hHHHHHHhCCCCCCEEEE-EEecccccccccccHHHHHHHHHHchhhcccCCCCCCCeEEEEEeCCCCCchHHHHHHHHH
Q 004092 321 NDTVRVKMGFKPDDLVIA-IVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAH 399 (774)
Q Consensus 321 k~~lR~~lgl~~~~~vIl-~vGsrl~~~KgiKg~~lLLeA~~~L~~~~p~~~~~~~~v~LvIvGG~~~e~Y~~~L~~la~ 399 (774)
+.....+++...+...|+ ..|+.....|. ...+..++.+..+.+++ ..++++|++.+.+ ..+.+.+
T Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~-wp~~~~~~L~~~l~~~~---------~~ivl~g~~~e~~---~~~~~~~ 233 (348)
T d1pswa_ 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKR-WPHYHYAELAKQLIDEG---------YQVVLFGSAKDHE---AGNEILA 233 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGS-CCHHHHHHHHHHHHHTT---------CEEEECCCGGGHH---HHHHHHT
T ss_pred HHHHHHHhccccCCCeEEeccccchhhccc-cchHHHhhhHHHHhhcC---------CccccccccchHH---HHHHHHH
Confidence 455566777776665554 44433333222 34566677777776653 5788888655422 2222222
Q ss_pred HcC---CCCccEEEccC--cccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEc
Q 004092 400 NLH---YPLGVVKHMAA--EGDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAP 455 (774)
Q Consensus 400 ~lg---L~~~~V~flG~--~~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIat 455 (774)
.+. ... .+.+.|. ..++..+++.||++|.+. +..+--|.|+|+|+|+-
T Consensus 234 ~~~~~~~~~-~~~l~g~~sl~el~~li~~a~l~I~~D-------tg~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 234 ALNTEQQAW-CRNLAGETQLDQAVILIAACKAIVTND-------SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp TSCHHHHTT-EEECTTTSCHHHHHHHHHTSSEEEEES-------SHHHHHHHHTTCCEEEE
T ss_pred hhhcccccc-cccccCCccHHHHHHHHhcceeEeecC-------ccHHHHHHHcCCCEEEE
Confidence 111 122 3555663 388899999999999875 34567899999999984
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=96.24 E-value=0.039 Score=62.73 Aligned_cols=141 Identities=12% Similarity=0.057 Sum_probs=88.7
Q ss_pred CCCCCCEEEEEEecccccccccccHHHHHHHHHHchh---hcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHc---
Q 004092 329 GFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFS---EVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNL--- 401 (774)
Q Consensus 329 gl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA~~~L~~---~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~l--- 401 (774)
.++++...++++= |+..- |...+++.-...+.. ..++ ....++.+++.| ..........+.+.+.++
T Consensus 521 ~ldp~~LtigfaR-Rfa~Y---KR~~L~~~~i~~l~~~l~~~~~--~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~ 594 (796)
T d1l5wa_ 521 EINPQAIFDIQIK-RLHEY---KRQHLNLLHILALYKEIRENPQ--ADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADV 594 (796)
T ss_dssp CCCTTSEEEEEES-CCCGG---GTHHHHHHHHHHHHHHHHTCTT--CCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHH
T ss_pred ccChhhccchhhh-hhhhh---hcccchhhhHHHHHHHHhcCcc--cCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHH
Confidence 3557776666665 77665 898885554443322 2221 223358999999 322332233333333221
Q ss_pred -CC-CC----ccEEEcc-Cc-ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccccccc--CccEE
Q 004092 402 -HY-PL----GVVKHMA-AE-GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDD--RVNGY 471 (774)
Q Consensus 402 -gL-~~----~~V~flG-~~-~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~d--g~~G~ 471 (774)
+- +. .+|.|+. +. +-...++.+|||-+..+...-+..|..=+-||.-|.+.++|--|...|+.++ ++||+
T Consensus 595 in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f 674 (796)
T d1l5wa_ 595 INNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIF 674 (796)
T ss_dssp HHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSE
T ss_pred hcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceE
Confidence 11 00 1588886 33 5556789999999987743222567777899999999999999998888754 77999
Q ss_pred EEcC
Q 004092 472 LFPK 475 (774)
Q Consensus 472 Lv~~ 475 (774)
++-.
T Consensus 675 ~fG~ 678 (796)
T d1l5wa_ 675 IFGH 678 (796)
T ss_dssp ECSC
T ss_pred EecC
Confidence 9853
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.11 E-value=0.041 Score=62.62 Aligned_cols=140 Identities=13% Similarity=-0.008 Sum_probs=89.3
Q ss_pred CCCCCCEEEEEEecccccccccccHHHHHHH----HHHchhhcccCCCCCCCeEEEEEe-CCCCCchHHHHHHHHHHc--
Q 004092 329 GFKPDDLVIAIVGTQFMYRGLWLEHALILRA----LLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNL-- 401 (774)
Q Consensus 329 gl~~~~~vIl~vGsrl~~~KgiKg~~lLLeA----~~~L~~~~p~~~~~~~~v~LvIvG-G~~~e~Y~~~L~~la~~l-- 401 (774)
.++++...++++= |+..- |...+.+.- +.++++ .++ ....++.+++.| ..........+.+++.++
T Consensus 545 ~ldp~~lfd~~ar-RfheY---KRq~Ln~~~i~~ly~rlk~-~~~--~~~~P~q~IFaGKAhP~d~~gK~iIk~I~~va~ 617 (824)
T d2gj4a1 545 HINPNSLFDVQVK-RIHEY---KRQLLNCLHVITLYNRIKK-EPN--KFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGD 617 (824)
T ss_dssp CCCTTSEEEEEES-CCCGG---GTHHHHHHHHHHHHHHHHH-CTT--SCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCcchhhhhhee-echhh---hhhhhhHhhHHHHHHHhhh-ccc--CCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHH
Confidence 3567776666665 77665 888773332 344443 222 344568999999 333333334444433322
Q ss_pred --C----CCC-ccEEEcc-Cc-ccHHHHHHHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccccccccc--CccE
Q 004092 402 --H----YPL-GVVKHMA-AE-GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDD--RVNG 470 (774)
Q Consensus 402 --g----L~~-~~V~flG-~~-~dl~~~l~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi~EiV~d--g~~G 470 (774)
+ +.+ .+|.|+. +. +-...++.+||+-...|...-+..|..=+-||.-|.+.++|--|...|+.++ ++||
T Consensus 618 ~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~ 697 (824)
T d2gj4a1 618 VVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENF 697 (824)
T ss_dssp HHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGS
T ss_pred HHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccE
Confidence 1 111 1477776 33 5566789999999988743222566666899999999999999998887764 6789
Q ss_pred EEEcC
Q 004092 471 YLFPK 475 (774)
Q Consensus 471 ~Lv~~ 475 (774)
+++-.
T Consensus 698 ~~fG~ 702 (824)
T d2gj4a1 698 FIFGM 702 (824)
T ss_dssp EECSC
T ss_pred EEeCC
Confidence 99853
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.58 E-value=0.14 Score=53.22 Aligned_cols=81 Identities=9% Similarity=-0.055 Sum_probs=57.9
Q ss_pred CCCccEEEccCcccHHHHH--HHcCEEEEcCccCcCCccHHHHHHHHcCCCEEEcCCccc----cccc-ccCccEEEEcC
Q 004092 403 YPLGVVKHMAAEGDVDSVL--NTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI----RKYV-DDRVNGYLFPK 475 (774)
Q Consensus 403 L~~~~V~flG~~~dl~~~l--~aaDI~V~PS~~E~qGfp~~llEAMA~G~PVIatd~ggi----~EiV-~dg~~G~Lv~~ 475 (774)
.++ +|.+.++..+. ++| ..+++||.= |-.+++.||+.+|+|+|+.+..+= ...+ +.-..|+-...
T Consensus 332 ~~~-nv~~~~w~Pq~-~lL~hp~~~~fVtH------GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~ 403 (471)
T d2vcha1 332 KKR-GFVIPFWAPQA-QVLAHPSTGGFLTH------CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRA 403 (471)
T ss_dssp TTT-EEEEESCCCHH-HHHHSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCC
T ss_pred cCC-CeeecccCCHH-HHhcCccCCEEEec------CCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEec
Confidence 344 79999998444 467 467788742 557789999999999999876532 2333 33234765543
Q ss_pred C-----CHHHHHHHHHHHHHc
Q 004092 476 E-----NIKALTHIILQVITN 491 (774)
Q Consensus 476 ~-----d~e~La~aI~~Ll~d 491 (774)
. +.++++++|.++++|
T Consensus 404 ~~~~~~t~~~l~~ai~~vl~~ 424 (471)
T d2vcha1 404 GDDGLVRREEVARVVKGLMEG 424 (471)
T ss_dssp CTTSCCCHHHHHHHHHHHHTS
T ss_pred CCCCcCCHHHHHHHHHHHhCC
Confidence 2 679999999999998
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=85.66 E-value=0.82 Score=37.10 Aligned_cols=81 Identities=16% Similarity=0.291 Sum_probs=52.0
Q ss_pred CCChHHHHHHHHHHHHHHcCCeEEEEEcCCCcchhhhhhcCccEEEcccchhHHHHhhhcCccEEEEcCCchhHHHHHHH
Q 004092 155 LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTGREKASFVNWLNYDGILVNSLEAKVVISNIM 234 (774)
Q Consensus 155 ~~GG~e~~v~~Lak~L~~~G~eV~V~t~~~~~~~~~~~~~gi~i~~l~~~~~l~~~i~~~~~DIIhvhs~~~~~~l~~Ll 234 (774)
.+||.. |..||+.|.++||+|+-......+....++..|++++.-.... +..++|+|++.+...... ..+.
T Consensus 8 GIgG~G--Ms~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~------~i~~~d~vV~SsAI~~~n-pel~ 78 (89)
T d1j6ua1 8 GIGGIG--MSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSAD------NWYDPDLVIKTPAVRDDN-PEIV 78 (89)
T ss_dssp TTTSHH--HHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTT------SCCCCSEEEECTTCCTTC-HHHH
T ss_pred eECHHH--HHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeeccc------ccCCCCEEEEecCcCCCC-HHHH
Confidence 467765 5568999999999999887776677777889998875322211 125789998876433111 1122
Q ss_pred hCCCCCCCEE
Q 004092 235 QEPFKSLPLV 244 (774)
Q Consensus 235 ~~~~~~ipvI 244 (774)
..+..++|+.
T Consensus 79 ~A~~~gIpv~ 88 (89)
T d1j6ua1 79 RARMERVPIE 88 (89)
T ss_dssp HHHHTTCCEE
T ss_pred HHHHcCCCcc
Confidence 1224567764
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