Citrus Sinensis ID: 004361

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------76

MGFACGLQQPNVFEGTRYRISDRLINSRFRYGGFGYNVSNRRIVSKTRSTRNLSKSISYAGCSKSSLVFRGNSDANLWGLYTCKSLFCSFDDFSKLSRGVCPTCQGNDSLAFIDGNGRNVEFSENGDGPEANSLGEEERETKEDAEPPTTDELRELLMNAMKELEVAQLNSTMFEEKAQRISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARLQVAIESLQDVKQEDDYPEGSTEDDAKSDGKEEDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIMLLAEQAVAFEIEATQRVNDAEIALQRAEKSLSNSSVDISERIKGYVSGDETAVKEEKAGSTDDVNVERDIDVPVNGDYLVSESSHDILPDKVSQSSEELYQSDELIDQENGKLNLDSPKEAEVEAEKSKNVIQTKKQEMQKDLTRESSPVNAPKTLQKKSSRFFPASFFSSAVDGTESTQASIFQGLMEYARKQLPKLVLGFLLFGAGVAFYANQAERSSLQLQQPDVITTSIEEASSNAKPLIREVKKLPKRIKKLLDMLPEQEINEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQVTLRK

cccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHcccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEHHHHHHHccccHHHHHHHcccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccc

ccccccccccccccccEEEccccEEEccccccccccccccccEEEEEcccHHcccEEEEccccccHHHEcccccccEEEcccccccccccccccccccccEEEccccccEEEEccccccEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcccccccHHHHHHHHccccccccHHHHHccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccHHHHccccccccccEEccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHEEccHHHHHHHcccccEEEEcHHHcccccHHHHHHHHHcHHHHHHHHHHccccHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHHHEHHEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcc

mgfacglqqpnvfegtryrISDRLINsrfryggfgynvsnrrivsktrstrnlsksisyagcsksslvfrgnsdanlwglytckslfcsfddfsklsrgvcptcqgndslafidgngrnvefsengdgpeanslgeeeretkedaeppttDELRELLMNAMKELEVAQLNSTMFEEKAQRISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARLQVAIESLQdvkqeddypegsteddaksdgkeedGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIMLLAEQAVAFEIEATQRVNDAEIALQRAEKslsnssvdiserikgyvsgdetavkeekagstddvnverdidvpvngdylvsesshdilpdkvsqsseelyqsdelidqengklnldspkeAEVEAEKSKNVIQTKKQEMQKdltresspvnapktlqkkssrffpasffssavdgtestQASIFQGLMEYARKQLPKLVLGFLLFGAGVafyanqaersslqlqqpdvITTSIEEASSNAKPLIREVKKLPKRIKKLLDmlpeqeineEEASLFDVLWLLLASVIFvpifqkipggspvlgYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFvsglpgpasivignglaLSSTAVVLQVLQERgestsrhgRATFSVLLFQVTLRK

mgfacglqqpnvfegtryrisdrlinsrfryggfgynvsnrrivsktrstrnlsksisyagcsksslvFRGNSDANLWGLYTCKSLFCSFDDFSKLSRGVCPTCQGNDSLAFIDGNGRNVEfsengdgpeanslgeeeretkedaepptTDELRELLMNAMKELEVAQLNSTMFEEKAQRISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARLQVAIESLqdvkqeddypegsteddaksdgkEEDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIMLLAEQAVAFEIEATQRVNDAEIALQRaekslsnssvdiserikgyvsgdetavkeekagstddvnverdidVPVNGDYLVSESSHDILPDKVSQSSEELYQSdelidqengklNLDSPKEAEveaeksknviqtkkqemqkdltresspvnapktlqkkssrffPASFFSSAVDGTESTQASIFQGLMEYARKQLPKLVLGFLLFGAGVAFYANQAERSSLQLQQPDVITTsieeassnakplirevkkLPKRIKKLLDMLPEQEINEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSSTAVVLQVLQErgestsrhgratfsvllfqvtlrk

MGFACGLQQPNVFEGTRYRISDRLINSRFRYGGFGYNVSNRRIVSKTRSTRNLSKSISYAGCSKSSLVFRGNSDANLWGLYTCKSLFCSFDDFSKLSRGVCPTCQGNDSLAFIDGNGRNVEFSENGDGPEANSLGEEERETKEDAEPPTTDELRELLMNAMKELEVAQLNSTMFEEKAQRISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARLQVAIESLQDVKQEDDYPEGSTEDDAKSDGKEEDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIMLLAEQAVAFEIEATQRVNDAEIALQRAEKSLSNSSVDISERIKGYVSGDETAVKEEKAGSTDDVNVERDIDVPVNGDYLVSESSHDILPDKVSQSSEELYQSDELIDQENGKLNLDSPKEAEVEAEKSKNVIQTKKQEMQKDLTRESSPVNAPKTLQKKssrffpasffssaVDGTESTQASIFQGLMEYARKQLPKlvlgfllfgagvafYANQAERSSLQLQQPDVITTSIEEASSNAKPLIREVKKLPKRIKKLLDMLPEQEINEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQvlvtavvvglvahfvSGLPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQVTLRK

***ACGLQQPNVFEGTRYRISDRLINSRFRYGGFGYNVSNRRIVSKT*****LSKSISYAGCSKSSLVFRGNSDANLWGLYTCKSLFCSFDDFSKLSRGVCPTCQGNDSLAFIDG*****************************************************************ISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARLQVAI*****************************************C********************************************DVANIMLLAEQAVAFEIEATQRVND******************************************************V**DY*****************************************************************************************************QASIFQGLMEYARKQLPKLVLGFLLFGAGVAFYANQ****************************************KLLDM********EEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSSTAVVLQVLQE*********RATFSVLLFQVT***

*******QQPNVFEGTRYRISDRLINSRFRYGGFGYNVSN*************************************************************PTCQGNDSLAFI**************************************ELRELLMNAMKELE****************SEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARLQVAIES*************************EDGLLLAAENDIKECQA*L**********************RLN*V***********EEDVANIMLLAEQAVAFEIEATQRVNDAEIALQRA***************************************************************************************************************************************F****FFSSAVDGTESTQASIFQGLMEYARKQLPKLVLGFLLFGAGVAFYANQAERSSLQLQQPDVITTSIEEASSNAKPLIREVKKLPKRIKKLLDMLPEQEINEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSSTAVVLQVLQ**********RATFSVLLFQVTLR*

MGFACGLQQPNVFEGTRYRISDRLINSRFRYGGFGYNVSNRRIVSKTRSTRNLSKSISYAGCSKSSLVFRGNSDANLWGLYTCKSLFCSFDDFSKLSRGVCPTCQGNDSLAFIDGNGRNVEFSEN************************TDELRELLMNAMKELEVAQLNSTMFEEKAQRISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARLQVAIESLQDV*********************EDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIMLLAEQAVAFEIEATQRVNDAEIALQRA********VDISERIKGYVSGD*************DVNVERDIDVPVNGDYLVSESSHDILP**********YQSDELIDQENGKLNLDS************NVIQTK****************APKTLQKKSSRFFPASFFSSAVDGTESTQASIFQGLMEYARKQLPKLVLGFLLFGAGVAFYANQAERSSLQLQQPDVITTSIEEASSNAKPLIREVKKLPKRIKKLLDMLPEQEINEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSSTAVVLQVLQ********HGRATFSVLLFQVTLRK

**FACGLQQPNVFEGTRYRISDRLINSRFRYGGFGYNVSNRRIVSKTRSTRNLSKSISYAGCSKSSLVFRGNSDANLWGLYTCKSLFCSFDDFSKLSRGVCPTCQGNDSLAFIDGNGRNVEFSE***********************PTTDELRELLMNAMKELEVAQLNSTMFEEKAQRISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARLQVAIESLQDVKQ****************GKEEDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIMLLAEQAVAFEIEATQRVNDAEIALQRAEKSLSNSS**I******************************************************S**********************************************************************F*********DGTESTQASIFQGLMEYARKQLPKLVLGFLLFGAGVAFYANQAERSSLQLQQPDVITTSIEEASSNAKPLIREVKKLPKRIKKLLDMLPEQEINEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQVTLRK

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MGFACGLQQPNVFEGTRYRISDRLINSRFRYGGFGYNVSNRRIVSKTRSTRNLSKSISYAGCSKSSLVFRGNSDANLWGLYTCKSLFCSFDDFSKLSRGVCPTCQGNDSLAFIDGNGRNVEFSENGDGPEANSLGEEERETKEDAEPPTxxxxxxxxxxxxxxxxxxxxxSTMFEEKAQRISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMAxxxxxxxxxxxxxxxxxxxxxDDYPEGSTEDDAKSDGKEEDGLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVANIMLLAEQAVAFxxxxxxxxxxxxxxxxxxxxxLSNSSVDISERIKGYVSGDETAVKEEKAGSTDDVNVERDIDVPVNGDYLVSESSHDILPDKVSQSSEELYQSDELIDQENGKLNLDSPKEAEVEAEKSKNVIQTKKQEMQKDLTRESSPVNAPKTLQKKSSRFFPASFFSSAVDGTESTQASIFQGLMEYARKQLPKLVLGFLLFGAGVAFYANQAERSSLQLQQPDVITTSIEEASSNAKPLIREVKKLPKRIKKLLDMLPEQEINEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQVTLRK

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		759	2.2.26 [Sep-21-2011]
O65272		1174	K(+) efflux antiporter 2,	yes	no	0.935	0.604	0.599	0.0
Q9ZTZ7		1193	K(+) efflux antiporter 1,	no	no	0.964	0.613	0.574	0.0
B1JIU4		602	Glutathione-regulated pot	yes	no	0.193	0.244	0.469	1e-27
Q664Q5		602	Glutathione-regulated pot	yes	no	0.193	0.244	0.469	1e-27
A4TGX5		602	Glutathione-regulated pot	yes	no	0.193	0.244	0.469	1e-27
Q1CCS7		602	Glutathione-regulated pot	yes	no	0.193	0.244	0.469	1e-27
A9R473		602	Glutathione-regulated pot	yes	no	0.193	0.244	0.469	1e-27
Q8ZJC4		602	Glutathione-regulated pot	yes	no	0.193	0.244	0.469	1e-27
Q1C2S9		602	Glutathione-regulated pot	yes	no	0.193	0.244	0.469	1e-27
B5XN76		601	Glutathione-regulated pot	yes	no	0.189	0.239	0.465	2e-25

>sp\|O65272\|KEA2_ARATH K(+) efflux antiporter 2, chloroplastic OS=Arabidopsis thaliana GN=KEA2 PE=1 SV=2	Back alignment and function desciption

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/764 (59%), Positives = 554/764 (72%), Gaps = 54/764 (7%)

Query: 1   MGFACGLQQPNVFEG----TRYRISDRLINSRFRYGGFG-YNVSNRRIVSKTRSTRNLSK 55
           M FA  +Q+ ++F G      Y + +R+I+++    G G     +  I SK RS     +
Sbjct: 1   MDFASSVQRQSMFHGGADFASYCLPNRMISAKLCPKGLGGTRFWDPMIDSKVRSAIRSKR 60

Query: 56  SISYAGCSKSSLVFRGNSDANLWG-LYTCKSLFCSFDDFSKLSRGVCPTCQGNDSLAFID 114
           ++SY    +SSL    + +   +G L   K           +  G    CQ +DS+  + 
Sbjct: 61  NVSY----RSSLTLNADFNGRFYGHLLPAKP--------QNVPLGFRLLCQSSDSVGDLV 108

Query: 115 GNGRNVEFSENGDGPEANSLGEEERETKEDAEPPTTDELRELLMNAMKELEVAQLNSTMF 174
           GN RN+EF+E  D  E  +  +EE++T+E    P+ +ELR+LL  A KELEVA LNSTMF
Sbjct: 109 GNDRNLEFAEGSDDREV-TFSKEEKDTREQDSAPSLEELRDLLNKATKELEVASLNSTMF 167

Query: 175 EEKAQRISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARL 234
           EEKAQRISE AIALKDEAA+AWN+VN TL++V E V+EE +AKEAV KATMALSLAEARL
Sbjct: 168 EEKAQRISEVAIALKDEAASAWNDVNQTLNVVQEAVDEESVAKEAVQKATMALSLAEARL 227

Query: 235 QVAIESLQDVKQEDDYPEGSTEDDAKSDGKEEDGLLLAAENDIKECQANLANCETELRRL 294
           QVA+ESL     E +    S E + +   K+++  LL+A+ DIKECQ NLA+CE +LRRL
Sbjct: 228 QVALESL-----EAEGYNTSEESEVRDGVKDKEEALLSAKADIKECQENLASCEEQLRRL 282

Query: 295 QSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIMLLAEQAVAFEIEATQRVNDAEIAL 354
           Q KK+ELQKEVDRLNE AE+AQ++ALKAEEDVANIM+LAEQAVAFE+EATQRVNDAEIAL
Sbjct: 283 QVKKDELQKEVDRLNEAAERAQISALKAEEDVANIMVLAEQAVAFELEATQRVNDAEIAL 342

Query: 355 QRAEKSLSNSSVDISERIKGYV-SGDETAVKEEKAGS-TDDVN--VERDIDVPVNGDYLV 410
           QRAEK+L  S     E  +G V  G  T V E++  S   DV+   ERD+ V      + 
Sbjct: 343 QRAEKTLFGSQTQ--ETTQGKVLDGKNTIVGEDEVLSEIVDVSHQAERDLVVVGVSSDVG 400

Query: 411 SESSHDILPDKVSQSSEELYQSDELIDQENGKLNLDSPKEAEVEAEKSKNVIQTKKQEMQ 470
           ++S                Y+SD     ENGK   D  KEAE EAEKSKNV+ TKKQE+Q
Sbjct: 401 TQS----------------YESD----NENGKPTADFAKEAEGEAEKSKNVVLTKKQEVQ 440

Query: 471 KDLTRESSPVNAPKTLQKKSSRFFPASFFSSAVDGTESTQASIFQGLMEYARKQLPKLVL 530
           KDL RESS  N  KT  KKSSRFFPASFFSS  DGT    A++F+ L+E A++Q PKL+L
Sbjct: 441 KDLPRESSSHNGTKTSLKKSSRFFPASFFSSNGDGT----ATVFESLVESAKQQWPKLIL 496

Query: 531 GFLLFGAGVAFYANQAERSSLQLQQPDVITTSIEEASSNAKPLIREVKKLPKRIKKLLDM 590
           GF L GAGVA Y+N   R++   QQP++++TS E+ SS+ KPLIR+++KLPKRIKKLL+M
Sbjct: 497 GFTLLGAGVAIYSNGVGRNNQLPQQPNIVSTSAEDVSSSTKPLIRQMQKLPKRIKKLLEM 556

Query: 591 LPEQEINEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHV 650
            P+QE+NEEEASL DVLWLLLASVIFVP+FQKIPGGSPVLGYLAAGILIGPYGLSIIR+V
Sbjct: 557 FPQQEVNEEEASLLDVLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILIGPYGLSIIRNV 616

Query: 651 HGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFVSGLP 710
           HGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTA V+GL+ H+V+G  
Sbjct: 617 HGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAAVIGLITHYVAGQA 676

Query: 711 GPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQ 754
           GPA+IVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQ
Sbjct: 677 GPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQ 720

May operate as a K(+)/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q9ZTZ7\|KEA1_ARATH K(+) efflux antiporter 1, chloroplastic OS=Arabidopsis thaliana GN=KEA1 PE=1 SV=2	Back alignment and function description

>sp\|B1JIU4\|KEFB_YERPY Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=kefB PE=3 SV=1	Back alignment and function description

>sp\|Q664Q5\|KEFB_YERPS Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=kefB PE=3 SV=1	Back alignment and function description

>sp\|A4TGX5\|KEFB_YERPP Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pestis (strain Pestoides F) GN=kefB PE=3 SV=1	Back alignment and function description

>sp\|Q1CCS7\|KEFB_YERPN Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=kefB PE=3 SV=1	Back alignment and function description

>sp\|A9R473\|KEFB_YERPG Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pestis bv. Antiqua (strain Angola) GN=kefB PE=3 SV=1	Back alignment and function description

>sp\|Q8ZJC4\|KEFB_YERPE Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pestis GN=kefB PE=3 SV=1	Back alignment and function description

>sp\|Q1C2S9\|KEFB_YERPA Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=kefB PE=3 SV=1	Back alignment and function description

>sp\|B5XN76\|KEFB_KLEP3 Glutathione-regulated potassium-efflux system protein KefB OS=Klebsiella pneumoniae (strain 342) GN=kefB PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		759
255541526		1228	Glutathione-regulated potassium-efflux s	0.990	0.612	0.683	0.0
225454115		1207	PREDICTED: K(+) efflux antiporter 2, chl	0.959	0.603	0.655	0.0
356522640		1206	PREDICTED: K(+) efflux antiporter 2, chl	0.861	0.542	0.640	0.0
356506274		1203	PREDICTED: K(+) efflux antiporter 2, chl	0.852	0.537	0.641	0.0
449433089		1212	PREDICTED: K(+) efflux antiporter 2, chl	0.969	0.607	0.610	0.0
240255705		1174	K(+) efflux antiporter 2 [Arabidopsis th	0.935	0.604	0.599	0.0
334186250		1185	K(+) efflux antiporter 2 [Arabidopsis th	0.935	0.599	0.599	0.0
356568360		1109	PREDICTED: K(+) efflux antiporter 2, chl	0.837	0.573	0.644	0.0
356532026		1107	PREDICTED: K(+) efflux antiporter 2, chl	0.833	0.571	0.643	0.0
297848322		1171	hypothetical protein ARALYDRAFT_311263 [	0.943	0.611	0.574	0.0

>gi\|255541526\|ref\|XP_002511827.1\| Glutathione-regulated potassium-efflux system protein kefB, putative [Ricinus communis] gi\|223549007\|gb\|EEF50496.1\| Glutathione-regulated potassium-efflux system protein kefB, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  974 bits (2517), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/780 (68%), Positives = 606/780 (77%), Gaps = 28/780 (3%)

Query: 1   MGFACGLQQPNVFEG---TRYRISDRLINSRFRYGGFGYNVSNRRIVSKTRSTRNLSKSI 57
           M  AC +QQPN F G   T YR+  RL +S  RY  F YNV +  IV K RS++  SK +
Sbjct: 1   MDLACSIQQPNAFHGSEVTCYRVPGRLYSSS-RYRSFRYNVVDPSIVLKDRSSKKRSKIL 59

Query: 58  SYAG-CSKSSLVFRGNSDANLWGLYT-CKSLFCSFDDFSKLSRGVCPTCQGNDSLAFIDG 115
           +Y G C  SSLVF     ++L   ++   S +CS      + +G    CQGNDSLA+++G
Sbjct: 60  AYNGSCLNSSLVFGRGFQSHLSCAHSNISSFYCSLGGGFNVLKGAKLHCQGNDSLAYVNG 119

Query: 116 NGRNVEFSENG---------DGPEANSLGEEERETKED-AEPPTTDELRELLMNAMKELE 165
           N RNVEF E           DG E   LGE E E KE  AE  + DEL+ELL  A++ELE
Sbjct: 120 NDRNVEFVEGSAESSRVGSEDGVELIRLGENEGEQKEVVAEASSLDELKELLQKALRELE 179

Query: 166 VAQLNSTMFEEKAQRISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATM 225
           +A+LNSTMFEEKAQRISE AIALKDEAANAW+NVN TLD +  +VNEE +AKEA+  ATM
Sbjct: 180 IARLNSTMFEEKAQRISETAIALKDEAANAWDNVNSTLDTIQGVVNEEAVAKEAIQNATM 239

Query: 226 ALSLAEARLQVAIESLQDVKQEDDYPEGSTEDDAKSDGKEEDGLLLAAENDIKECQANLA 285
           ALSLAEARL+VA+ES+   K E D P GS   D   D ++ED  L  A+++I ECQ NL 
Sbjct: 240 ALSLAEARLRVAVESIDSAKGETDSPHGSGVSDVVKDIRKEDEALSDAQDEIIECQMNLG 299

Query: 286 NCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIMLLAEQAVAFEIEATQ 345
           NCE ELRRLQSKKEELQKEVDRLNEVAEKAQM+ALKAEEDVAN+MLLAEQAVAFE+EATQ
Sbjct: 300 NCEAELRRLQSKKEELQKEVDRLNEVAEKAQMDALKAEEDVANVMLLAEQAVAFELEATQ 359

Query: 346 RVNDAEIALQRAEKSLSNSSVDISERIKGYVSGDETAVKEEKAGSTDDVNVERDIDVPVN 405
           RVNDAEIALQRAEK LS+SSVD  E  +GYVSGDE   +EEK       + E++ D  ++
Sbjct: 360 RVNDAEIALQRAEKLLSSSSVD-KETTQGYVSGDEAVREEEKWSEGRTADDEKERDASID 418

Query: 406 GDYLVSESSHDILPDKVSQSSEELYQSDELIDQENGKLNLDSPKEAEVEAEKSKNVIQTK 465
            D LV E S D L DK SQSS+ELY SD+  D ENGKLNLDS KE EVEAEKSK+ +Q K
Sbjct: 419 ADLLVGEPSIDGLLDKASQSSKELYHSDDSSDCENGKLNLDSLKEVEVEAEKSKSGVQPK 478

Query: 466 KQEMQKDLTRES--SPVNAPKTLQKKSSRFFPASFFSSAVDGTESTQASIFQGLMEYARK 523
           KQEMQKD+TRES  SP N+PK L KKSSRFF ASFFS  VDGTE T AS+FQGL++ A++
Sbjct: 479 KQEMQKDITRESSASPTNSPKALLKKSSRFFSASFFSFTVDGTELTPASVFQGLIQSAKQ 538

Query: 524 QLPKLVLGFLLFGAGVAFYANQAERSSLQLQQPDVITTSIEEASSNAKPLIREVKKLPKR 583
           Q+PKL+LG +LFGAGVAFY+N+AERS+  LQQ DV+TTSIEE SSNAKPLIR ++KLPKR
Sbjct: 539 QMPKLILGLVLFGAGVAFYSNRAERSTQMLQQTDVVTTSIEEVSSNAKPLIRHIQKLPKR 598

Query: 584 IKKLLDMLPEQE---------INEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLA 634
           IKKLL MLP QE         +NEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLA
Sbjct: 599 IKKLLAMLPHQEAYFPFTLFWMNEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLA 658

Query: 635 AGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLV 694
           AGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLG+AQVLV
Sbjct: 659 AGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGTAQVLV 718

Query: 695 TAVVVGLVAHFVSGLPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQ 754
           TAV VGL +HFVSGLPGPA+IV+GNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQ
Sbjct: 719 TAVAVGLGSHFVSGLPGPAAIVVGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQ 778

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225454115\|ref\|XP_002269352.1\| PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356522640\|ref\|XP_003529954.1\| PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Glycine max]	Back alignment and taxonomy information

>gi\|356506274\|ref\|XP_003521911.1\| PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Glycine max]	Back alignment and taxonomy information

>gi\|449433089\|ref\|XP_004134330.1\| PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Cucumis sativus] gi\|449480375\|ref\|XP_004155876.1\| PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|240255705\|ref\|NP_191972.6\| K(+) efflux antiporter 2 [Arabidopsis thaliana] gi\|298351840\|sp\|O65272.2\|KEA2_ARATH RecName: Full=K(+) efflux antiporter 2, chloroplastic; Short=AtKEA2 gi\|332656511\|gb\|AEE81911.1\| K(+) efflux antiporter 2 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|334186250\|ref\|NP_001190645.1\| K(+) efflux antiporter 2 [Arabidopsis thaliana] gi\|332656512\|gb\|AEE81912.1\| K(+) efflux antiporter 2 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356568360\|ref\|XP_003552379.1\| PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Glycine max]	Back alignment and taxonomy information

>gi\|356532026\|ref\|XP_003534575.1\| PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Glycine max]	Back alignment and taxonomy information

>gi\|297848322\|ref\|XP_002892042.1\| hypothetical protein ARALYDRAFT_311263 [Arabidopsis lyrata subsp. lyrata] gi\|297337884\|gb\|EFH68301.1\| hypothetical protein ARALYDRAFT_311263 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		759
TAIR\|locus:2198215		1193	KEA1 "K+ efflux antiporter 1"	0.918	0.584	0.554	2.2e-183
TIGR_CMR\|APH_1305		571	APH_1305 "glutathione-regulate	0.197	0.262	0.480	1.8e-25
TIGR_CMR\|ECH_0146		568	ECH_0146 "putative glutathione	0.197	0.264	0.453	6.4e-24
TIGR_CMR\|NSE_0885		578	NSE_0885 "glutathione-regulate	0.204	0.268	0.433	4.1e-23
UNIPROTKB\|Q9KNX4		656	VC_2606 "Glutathione-regulated	0.188	0.217	0.462	1.6e-21
TIGR_CMR\|VC_2606		656	VC_2606 "glutathione-regulated	0.188	0.217	0.462	1.6e-21
UNIPROTKB\|Q0C665		601	kefC "Glutathione-regulated po	0.197	0.249	0.440	2.1e-21
TIGR_CMR\|SO_1481		589	SO_1481 "glutathione-regulated	0.204	0.263	0.401	4.2e-20
UNIPROTKB\|P45522		601	kefB [Escherichia coli K-12 (t	0.196	0.247	0.427	2e-19
TIGR_CMR\|SO_1647		648	SO_1647 "glutathione-regulated	0.200	0.234	0.414	2.4e-19

TAIR\|locus:2198215 KEA1 "K+ efflux antiporter 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1779 (631.3 bits), Expect = 2.2e-183, P = 2.2e-183
 Identities = 396/714 (55%), Positives = 494/714 (69%)

Query:    45 SKTRSTRNLSKSISYAGC-SKSSLVFRGNSDANLWGLYTCKSLFCSFDDFSKLSRGVCPT 103
             SK  S   L ++++ +G  +  +  F G   +    L++ KS+  +     ++  G    
Sbjct:    40 SKVHSCFRLRRNVAQSGTLNLMNACFSGRFYSG--HLHSTKSILGNGHQAKRIPFGFRLR 97

Query:   104 CQGNDSLAFIDGNGRNV-EFSENGDGPEANSLGEEERETKEDAEPPTTDELRELLMNAMK 162
             CQG++SL   D N   + E SE+ D  EA  L +   E   D+     +EL+ELL  A+K
Sbjct:    98 CQGHESLGNADSNDHRIGESSESSDETEATDLKDARVENDTDS----LEELKELLHKAIK 153

Query:   163 ELEVAQLNSTMFEEKAQRISEAAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHK 222
             ELEVA+LNSTMFEEKAQRISE AIALKDEAA AW +VN TLD++ + V EE +AKEAV  
Sbjct:   154 ELEVARLNSTMFEEKAQRISERAIALKDEAATAWLDVNKTLDVIRDTVYEEALAKEAVQT 213

Query:   223 ATMALSLAEARLQVAIESLQDVKQEDDYPEGSTEDDAKSDGKEEDGLLLAAENDIKECQA 282
             ATMALSLAEARLQV +ESL+     +D P  S E +   D  +++  LLAA++DIKECQ 
Sbjct:   214 ATMALSLAEARLQVIVESLE-AGAGNDIPHVSEETEETIDVNDKEEALLAAKDDIKECQV 272

Query:   283 NLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIMLLAEQAVAFEIE 342
             NL NCE++L  L SKK+ELQKEVD+LNE AE  Q+++LKAEEDV NIM LAEQAVAFE+E
Sbjct:   273 NLDNCESQLSALLSKKDELQKEVDKLNEFAETIQISSLKAEEDVTNIMKLAEQAVAFELE 332

Query:   343 ATQRVNDAEIALQRAEKSLSNSSVDISERIKGYVSGDETAVKEEK--AGSTDDVNVERDI 400
             ATQRVNDAEIALQRAEKSLS S     E  +G +S +ET+ ++    +G+ +DV  + + 
Sbjct:   333 ATQRVNDAEIALQRAEKSLSISQTP--EETQGQLSDEETSQEDAMVLSGNVEDVTHQVEK 390

Query:   401 DVPVNGDYLVSESSHDILPDKVSQSSEELYQSDELIDQENGKLNLDSPKEAEVEAEKSKN 460
             + P +GD  V + + +++PD V Q +++L Q  E  D ENGK +++S K  E ++EK K 
Sbjct:   391 ESPKDGDLPVVQITAELVPDIVGQRNKKLTQPYESSDHENGKPSVESSKVVEADSEKPKI 450

Query:   461 VIQTKKQEMQKDLTRESSPVNAPKTLQKKXXXXXXXXXXXXXVDGTESTQASIFQGLMEY 520
              +QTKKQE QKDL +E S +N+PK    K              DGT    A++F  L+  
Sbjct:   451 NVQTKKQETQKDLPKEGSSLNSPKASFNKSSRFFSASFFSSNPDGT----ATVFGSLVGS 506

Query:   521 ARKQLPKXXXXXXXXXXXXXXYANQAERSSLQLQQPDVITTSIEEASSNAKPLIREVKKL 580
              ++Q PK              Y+N    ++  LQQPDV +TS E+ SS+ KPLIR+V+KL
Sbjct:   507 VKQQWPKLVLGLALLGAGLTLYSNGVGGNNQLLQQPDVTSTSTEDVSSSTKPLIRQVQKL 566

Query:   581 PKRIKKLLDMLPEQEINEEEASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIG 640
             PKRIKKLL+M+P QE+NEEEASLFD LWLLLASVIFVP+FQKIPGGSPVLGYLAAGILIG
Sbjct:   567 PKRIKKLLEMIPHQEVNEEEASLFDFLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILIG 626

Query:   641 PYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQXXXXXXXXX 700
             PYGLSIIR+VHGT+AIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQ         
Sbjct:   627 PYGLSIIRNVHGTRAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAAVVG 686

Query:   701 XXXXXXSGLPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQ 754
                   +G  GPA+IVIGNGLALSSTAVVLQVLQERGESTSRHGRA+FSVLLFQ
Sbjct:   687 LLAHYVAGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRASFSVLLFQ 740

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0015079 "potassium ion transmembrane transporter activity" evidence=ISS

GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA

GO:0015386 "potassium:hydrogen antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

TIGR_CMR\|APH_1305 APH_1305 "glutathione-regulated potassium-efflux system protein" [Anaplasma phagocytophilum HZ (taxid:212042)]	Back alignment and assigned GO terms

TIGR_CMR\|ECH_0146 ECH_0146 "putative glutathione-regulated potassium-efflux system protein KefB" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)]	Back alignment and assigned GO terms

TIGR_CMR\|NSE_0885 NSE_0885 "glutathione-regulated potassium-efflux system protein" [Neorickettsia sennetsu str. Miyayama (taxid:222891)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9KNX4 VC_2606 "Glutathione-regulated potassium-efflux system protein KefB" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]	Back alignment and assigned GO terms

TIGR_CMR\|VC_2606 VC_2606 "glutathione-regulated potassium-efflux system protein KefB" [Vibrio cholerae O1 biovar El Tor (taxid:686)]	Back alignment and assigned GO terms

UNIPROTKB\|Q0C665 kefC "Glutathione-regulated potassium-efflux system protein KefC" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]	Back alignment and assigned GO terms

TIGR_CMR\|SO_1481 SO_1481 "glutathione-regulated potassium-efflux system protein" [Shewanella oneidensis MR-1 (taxid:211586)]	Back alignment and assigned GO terms

UNIPROTKB\|P45522 kefB [Escherichia coli K-12 (taxid:83333)]	Back alignment and assigned GO terms

TIGR_CMR\|SO_1647 SO_1647 "glutathione-regulated potassium-efflux system protein KefB, putative" [Shewanella oneidensis MR-1 (taxid:211586)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O65272	KEA2_ARATH	No assigned EC number	0.5994	0.9354	0.6047	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		759
TIGR00932		273	TIGR00932, 2a37, transporter, monovalent cation:pr	3e-53
PRK03562		621	PRK03562, PRK03562, glutathione-regulated potassiu	5e-41
PRK03659		601	PRK03659, PRK03659, glutathione-regulated potassiu	4e-40
COG0475		397	COG0475, KefB, Kef-type K+ transport systems, memb	8e-39
pfam00999		370	pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang	1e-26
COG4651		408	COG4651, RosB, Kef-type K+ transport system, predi	2e-15
PRK10669		558	PRK10669, PRK10669, putative cation:proton antipor	3e-12
COG0025		429	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiport	8e-11
PRK05326		562	PRK05326, PRK05326, potassium/proton antiporter; R	2e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	7e-07
pfam03956		191	pfam03956, DUF340, Membrane protein of unknown fun	3e-05
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	4e-05
PRK02224		880	PRK02224, PRK02224, chromosome segregation protein	1e-04
TIGR03082		156	TIGR03082, Gneg_AbrB_dup, membrane protein AbrB du	4e-04
COG2431		297	COG2431, COG2431, Predicted membrane protein [Func	0.001
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.002
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.002
COG3263		574	COG3263, COG3263, NhaP-type Na+/H+ and K+/H+ antip	0.003
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.004
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.004
pfam01757		326	pfam01757, Acyl_transf_3, Acyltransferase family	0.004
PRK04863		1486	PRK04863, mukB, cell division protein MukB; Provis	0.004

>gnl\|CDD\|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family	Back alignment and domain information

 Score =  185 bits (471), Expect = 3e-53
 Identities = 74/145 (51%), Positives = 101/145 (69%), Gaps = 1/145 (0%)

Query: 610 LLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIG 669
           LLA+V+ VP+ +++     VLGYL AG+LIGP GL +I +V G   +AEFGV+ L+F IG
Sbjct: 1   LLAAVLAVPLSRRLGIP-SVLGYLLAGVLIGPSGLGLISNVEGVNHLAEFGVILLMFLIG 59

Query: 670 LELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSSTAVV 729
           LEL +ERL  ++K  FG+G  QVLV  V++GL+   + GL   A++VIG  LALSSTAVV
Sbjct: 60  LELDLERLWKLRKAAFGVGVLQVLVPGVLLGLLLGHLLGLALGAAVVIGIILALSSTAVV 119

Query: 730 LQVLQERGESTSRHGRATFSVLLFQ 754
           +QVL+ERG   +  G+    +LLFQ
Sbjct: 120 VQVLKERGLLKTPFGQTVLGILLFQ 144

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 273

>gnl\|CDD\|235131 PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	Back alignment and domain information

>gnl\|CDD\|179625 PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional	Back alignment and domain information

>gnl\|CDD\|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family	Back alignment and domain information

>gnl\|CDD\|226998 COG4651, RosB, Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|182633 PRK10669, PRK10669, putative cation:proton antiport protein; Provisional	Back alignment and domain information

>gnl\|CDD\|223104 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|235410 PRK05326, PRK05326, potassium/proton antiporter; Reviewed	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|217813 pfam03956, DUF340, Membrane protein of unknown function (DUF340)	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|213773 TIGR03082, Gneg_AbrB_dup, membrane protein AbrB duplication	Back alignment and domain information

>gnl\|CDD\|225287 COG2431, COG2431, Predicted membrane protein [Function unknown]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|225802 COG3263, COG3263, NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|216682 pfam01757, Acyl_transf_3, Acyltransferase family	Back alignment and domain information

>gnl\|CDD\|235316 PRK04863, mukB, cell division protein MukB; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		759
PRK03562		621	glutathione-regulated potassium-efflux system prot	99.91
PLN03159		832	cation/H(+) antiporter 15; Provisional	99.9
PRK03659		601	glutathione-regulated potassium-efflux system prot	99.9
TIGR00932		273	2a37 transporter, monovalent cation:proton antipor	99.9
PRK10669		558	putative cation:proton antiport protein; Provision	99.9
COG0475		397	KefB Kef-type K+ transport systems, membrane compo	99.88
PRK05326		562	potassium/proton antiporter; Reviewed	99.83
COG4651		408	RosB Kef-type K+ transport system, predicted NAD-b	99.75
PF00999		380	Na_H_Exchanger: Sodium/hydrogen exchanger family;	99.71
KOG1650		769	consensus Predicted K+/H+-antiporter [Inorganic io	99.66
TIGR00831		525	a_cpa1 Na+/H+ antiporter, bacterial form. This mod	99.64
TIGR00844		810	c_cpa1 na(+)/h(+) antiporter. This model is specif	99.52
COG0025		429	NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg	99.4
TIGR00840		559	b_cpa1 sodium/hydrogen exchanger 3. This model is	99.23
COG3263		574	NhaP-type Na+/H+ and K+/H+ antiporters with a uniq	99.18
KOG1965		575	consensus Sodium/hydrogen exchanger protein [Inorg	98.51
KOG4505		467	consensus Na+/H+ antiporter [Inorganic ion transpo	97.79
PRK03562		621	glutathione-regulated potassium-efflux system prot	97.45
PRK03659		601	glutathione-regulated potassium-efflux system prot	97.42
PLN03159		832	cation/H(+) antiporter 15; Provisional	97.12
PRK10669		558	putative cation:proton antiport protein; Provision	97.1
PRK03818		552	putative transporter; Validated	96.78
PRK14853		423	nhaA pH-dependent sodium/proton antiporter; Provis	96.72
TIGR03802		562	Asp_Ala_antiprt aspartate-alanine antiporter. All	96.52
PF03956		191	DUF340: Membrane protein of unknown function (DUF3	96.48
COG0475		397	KefB Kef-type K+ transport systems, membrane compo	96.44
TIGR03082		156	Gneg_AbrB_dup membrane protein AbrB duplication. T	96.34
KOG1966		670	consensus Sodium/hydrogen exchanger protein [Inorg	96.33
TIGR03802		562	Asp_Ala_antiprt aspartate-alanine antiporter. All	96.22
PF05145		318	AmoA: Putative ammonia monooxygenase; InterPro: IP	96.15
TIGR01625		154	YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplicati	96.1
PRK03818		552	putative transporter; Validated	95.88
PF06826		169	Asp-Al_Ex: Predicted Permease Membrane Region; Int	95.79
TIGR00210		398	gltS sodium--glutamate symport carrier (gltS).	95.75
PRK04972		558	putative transporter; Provisional	95.65
PF03601		305	Cons_hypoth698: Conserved hypothetical protein 698	95.41
PRK04972		558	putative transporter; Provisional	95.41
PRK05326		562	potassium/proton antiporter; Reviewed	95.13
COG2855		334	Predicted membrane protein [Function unknown]	94.97
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	94.67
COG2431		297	Predicted membrane protein [Function unknown]	94.62
TIGR00946		321	2a69 he Auxin Efflux Carrier (AEC) Family.	94.46
COG2985		544	Predicted permease [General function prediction on	94.27
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	93.91
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	93.82
COG0679		311	Predicted permeases [General function prediction o	93.8
TIGR00783		347	ccs citrate carrier protein, CCS family. These pro	93.78
TIGR00698		335	conserved hypothetical integral membrane protein.	93.72
PF03616		368	Glt_symporter: Sodium/glutamate symporter; InterPr	93.62
TIGR00698		335	conserved hypothetical integral membrane protein.	93.33
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	92.59
TIGR00832		328	acr3 arsenical-resistance protein. The first prote	92.14
KOG4673		961	consensus Transcription factor TMF, TATA element m	92.08
TIGR00210		398	gltS sodium--glutamate symport carrier (gltS).	92.02
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	91.54
PRK12460		312	2-keto-3-deoxygluconate permease; Provisional	91.51
TIGR02680		1353	conserved hypothetical protein TIGR02680. Members	91.49
PRK04125		141	murein hydrolase regulator LrgA; Provisional	91.32
TIGR00808		254	malonate_madM malonate transporter, MadM subunit.	91.15
PRK15178		434	Vi polysaccharide export inner membrane protein Ve	91.08
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	90.99
PF00999		380	Na_H_Exchanger: Sodium/hydrogen exchanger family;	90.87
PF06008		264	Laminin_I: Laminin Domain I; InterPro: IPR009254 L	90.54
PRK04863		1486	mukB cell division protein MukB; Provisional	90.53
PRK09903		314	putative transporter YfdV; Provisional	90.45
COG0786		404	GltS Na+/glutamate symporter [Amino acid transport	90.1
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	90.01
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	89.84
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	89.59
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	89.52
PF03616		368	Glt_symporter: Sodium/glutamate symporter; InterPr	89.38
PF03390		414	2HCT: 2-hydroxycarboxylate transporter family; Int	89.0
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	88.99
PRK01658		122	holin-like protein; Validated	88.86
COG3493		438	CitS Na+/citrate symporter [Energy production and	88.83
PF00038		312	Filament: Intermediate filament protein; InterPro:	88.23
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	88.19
PRK01821		133	hypothetical protein; Provisional	88.08
KOG1650		769	consensus Predicted K+/H+-antiporter [Inorganic io	87.86
PF03812		314	KdgT: 2-keto-3-deoxygluconate permease; InterPro:	87.7
PF13593		313	DUF4137: SBF-like CPA transporter family (DUF4137)	87.43
KOG0996		1293	consensus Structural maintenance of chromosome pro	86.6
COG3180		352	AbrB Putative ammonia monooxygenase [General funct	86.05
PRK14856		438	nhaA pH-dependent sodium/proton antiporter; Provis	86.02
KOG1307		588	consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an	85.99
COG5374		192	Uncharacterized conserved protein [Function unknow	85.05
PF06008		264	Laminin_I: Laminin Domain I; InterPro: IPR009254 L	84.87
PF05684		378	DUF819: Protein of unknown function (DUF819); Inte	84.11
PF05982		327	DUF897: Domain of unknown function (DUF897) ; Inte	83.71
PF01758		187	SBF: Sodium Bile acid symporter family; InterPro:	83.54
PRK14855		423	nhaA pH-dependent sodium/proton antiporter; Provis	83.3
TIGR00844		810	c_cpa1 na(+)/h(+) antiporter. This model is specif	83.25
COG3329		372	Predicted permease [General function prediction on	82.82
TIGR02680		1353	conserved hypothetical protein TIGR02680. Members	82.68
COG1346		230	LrgB Putative effector of murein hydrolase [Cell e	82.13
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	82.08
PF05276		239	SH3BP5: SH3 domain-binding protein 5 (SH3BP5); Int	81.77
PF04012		221	PspA_IM30: PspA/IM30 family; InterPro: IPR007157 T	81.63
COG2985		544	Predicted permease [General function prediction on	81.6
COG1380		128	Putative effector of murein hydrolase LrgA [Genera	81.24
COG0786		404	GltS Na+/glutamate symporter [Amino acid transport	80.1

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional	Back alignment and domain information

Probab=99.91  E-value=1.1e-23  Score=239.12  Aligned_cols=156  Identities=40%  Similarity=0.650  Sum_probs=146.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHhhcCChhHHhhh
Q 004361          601 ASLFDVLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSM  680 (759)
Q Consensus       601 ~lLlqL~LILlaA~LLg~LlrRL~gLP~VVGyILAGIILGPsgLGlI~~~eiLe~LAEIGLIfLLFlaGLELDl~~LKr~  680 (759)
                      .++++++++++++.++.++++|+ ++|+++|||++|+++||+++|++++.+.+..++++|++|+||.+|+|+|++.+|++
T Consensus         5 ~~l~~~~~~l~~a~i~~~l~~rl-~lp~vlgyilaGillGP~~lg~i~~~~~i~~laelGvv~LlF~iGLEl~~~~l~~~   83 (621)
T PRK03562          5 HTLIQALIYLGAAVLIVPIAVRL-GLGSVLGYLIAGCIIGPWGLRLVTDVESILHFAEFGVVLMLFVIGLELDPQRLWKL   83 (621)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh-CCChHHHHHHHHHHhCcccccCCCCHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence            46899999999999999999999 99999999999999999999999888889999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHhhccHHHHHHHHHHcCCCCChhHHHHHHHHHHHHhhc
Q 004361          681 KKYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQVTLR  758 (759)
Q Consensus       681 ~K~iLvLAilgVLLp~~lVG~al~~lLGls~~~ALLLGaILSaTSpaVVv~VLkELGLLnSe~GRlaLSalVLqDIls  758 (759)
                      ++.++.+|++++++|++ +++++.+++|++|..++++|++++.||+++++++|+|+|+++|++||.+++++++||+++
T Consensus        84 ~~~~~~~g~~qv~~~~~-~~~~~~~~~g~~~~~al~ig~~la~SStaiv~~~L~e~~~l~t~~G~~~l~~ll~~Dl~~  160 (621)
T PRK03562         84 RRSIFGGGALQMVACGG-LLGLFCMLLGLRWQVALLIGLGLALSSTAIAMQAMNERNLMVTQMGRSAFAILLFQDIAA  160 (621)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccCchHHHHHHHHHHHHHHH
Confidence            99999999999999865 455566778999999999999999999999999999999999999999999999999863

>PLN03159 cation/H(+) antiporter 15; Provisional	Back alignment and domain information

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional	Back alignment and domain information

>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family	Back alignment and domain information

>PRK10669 putative cation:proton antiport protein; Provisional	Back alignment and domain information

>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	Back alignment and domain information

>PRK05326 potassium/proton antiporter; Reviewed	Back alignment and domain information

>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ]	Back alignment and domain information

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form	Back alignment and domain information

>TIGR00844 c_cpa1 na(+)/h(+) antiporter	Back alignment and domain information

>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3	Back alignment and domain information

>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional	Back alignment and domain information

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional	Back alignment and domain information

>PLN03159 cation/H(+) antiporter 15; Provisional	Back alignment and domain information

>PRK10669 putative cation:proton antiport protein; Provisional	Back alignment and domain information

>PRK03818 putative transporter; Validated	Back alignment and domain information

>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional	Back alignment and domain information

>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter	Back alignment and domain information

>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments	Back alignment and domain information

>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication	Back alignment and domain information

>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter	Back alignment and domain information

>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase	Back alignment and domain information

>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain	Back alignment and domain information

>PRK03818 putative transporter; Validated	Back alignment and domain information

>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters	Back alignment and domain information

>TIGR00210 gltS sodium--glutamate symport carrier (gltS)	Back alignment and domain information

>PRK04972 putative transporter; Provisional	Back alignment and domain information

>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins	Back alignment and domain information

>PRK04972 putative transporter; Provisional	Back alignment and domain information

>PRK05326 potassium/proton antiporter; Reviewed	Back alignment and domain information

>COG2855 Predicted membrane protein [Function unknown]	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>COG2431 Predicted membrane protein [Function unknown]	Back alignment and domain information

>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family	Back alignment and domain information

>COG2985 Predicted permease [General function prediction only]	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>COG0679 Predicted permeases [General function prediction only]	Back alignment and domain information

>TIGR00783 ccs citrate carrier protein, CCS family	Back alignment and domain information

>TIGR00698 conserved hypothetical integral membrane protein	Back alignment and domain information

>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate	Back alignment and domain information

>TIGR00698 conserved hypothetical integral membrane protein	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>TIGR00832 acr3 arsenical-resistance protein	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>TIGR00210 gltS sodium--glutamate symport carrier (gltS)	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>PRK12460 2-keto-3-deoxygluconate permease; Provisional	Back alignment and domain information

>TIGR02680 conserved hypothetical protein TIGR02680	Back alignment and domain information

>PRK04125 murein hydrolase regulator LrgA; Provisional	Back alignment and domain information

>TIGR00808 malonate_madM malonate transporter, MadM subunit	Back alignment and domain information

>PRK15178 Vi polysaccharide export inner membrane protein VexD; Provisional	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ]	Back alignment and domain information

>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>PRK09903 putative transporter YfdV; Provisional	Back alignment and domain information

>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate	Back alignment and domain information

>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>PRK01658 holin-like protein; Validated	Back alignment and domain information

>COG3493 CitS Na+/citrate symporter [Energy production and conversion]	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PRK01821 hypothetical protein; Provisional	Back alignment and domain information

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi	Back alignment and domain information

>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137)	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only]	Back alignment and domain information

>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional	Back alignment and domain information

>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>COG5374 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells	Back alignment and domain information

>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species	Back alignment and domain information

>PF05982 DUF897: Domain of unknown function (DUF897) ; InterPro: IPR010293 This is a family of bacterial proteins with unknown function	Back alignment and domain information

>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes	Back alignment and domain information

>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional	Back alignment and domain information

>TIGR00844 c_cpa1 na(+)/h(+) antiporter	Back alignment and domain information

>COG3329 Predicted permease [General function prediction only]	Back alignment and domain information

>TIGR02680 conserved hypothetical protein TIGR02680	Back alignment and domain information

>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>PF05276 SH3BP5: SH3 domain-binding protein 5 (SH3BP5); InterPro: IPR007940 The SH3 domain-binding protein inhibits the auto and transphophorylation of BTK and acts as a negative regulator of BTK-related signalling in B cells	Back alignment and domain information

>PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription	Back alignment and domain information

>COG2985 Predicted permease [General function prediction only]	Back alignment and domain information

>COG1380 Putative effector of murein hydrolase LrgA [General function prediction only]	Back alignment and domain information

>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		759
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-10
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	3e-05
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 61.8 bits (149), Expect = 6e-10
 Identities = 74/527 (14%), Positives = 145/527 (27%), Gaps = 151/527 (28%)

Query: 8   QQPN----VFEGTRYRISDRLINS--RFRYGGFGYNVSNRRIVSKTRST-RNLSKSISY- 59
           +QP+    ++   R    DRL N    F      YNVS  +   K R     L +     
Sbjct: 103 RQPSMMTRMYIEQR----DRLYNDNQVFA----KYNVSRLQPYLKLRQALLEL-RPAKNV 153

Query: 60  -----AGCSKSSLV--------------FR------GNSD------ANLWGLYT-CKSLF 87
                 G  K+ +               F+       N +        L  L       +
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 88  CSFDDFS------------KLSRGVCPTCQGNDSLAFIDG--NGRNVE-FSEN------- 125
            S  D S            +L R +       + L  +    N +    F+ +       
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSK-PYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272

Query: 126 GDGPEANSLGEEER--ETKEDAEPP-TTDELRELLMNAMKELEVAQLNSTMFEEKAQRIS 182
                 + L        + +      T DE++ LL+  + +     L       +    +
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL-DCRPQDL-----PREVLTTN 326

Query: 183 EAAIAL----KDEAANAWNNV-NVTLDMVHEIVNEECIAKEAVHKATMALSLAEAR---L 234
              +++      +    W+N  +V  D +  I+ E  +           L  AE R    
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTII-ESSLN---------VLEPAEYRKMFD 376

Query: 235 QVAI--ESLQDVK----------QEDDYPEGSTEDDAKSDGKEEDGLLLAAENDIKECQA 282
           ++++                    +    +           K         E   KE   
Sbjct: 377 RLSVFPP---SAHIPTILLSLIWFDVIKSD--VMVVVNKLHK-----YSLVEKQPKESTI 426

Query: 283 NLANCETELRRLQSKKEELQKE-VDRLNEVAEKAQMNALKAEED------VANIMLLAEQ 335
           ++ +   EL+     +  L +  VD  N        + +    D      + + +   E 
Sbjct: 427 SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486

Query: 336 AVAFE-----------IEATQRVNDAEIALQRAEKSLSNSSVDISERIKGYVSGDETAVK 384
                           +E  Q++     A   A  S+ N+   + +  K Y+  D     
Sbjct: 487 PERMTLFRMVFLDFRFLE--QKIRHDSTAWN-ASGSILNTLQQL-KFYKPYIC-DNDPKY 541

Query: 385 EEKAGSTDDVNVERDIDVPVNGDYLVSESSHDILPDKVSQSSEELYQ 431
           E    +  D        +P   + L+     D+L   +    E +++
Sbjct: 542 ERLVNAILDF-------LPKIEENLICSKYTDLLRIALMAEDEAIFE 581

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		759
1zcd_A		388	Na(+)/H(+) antiporter 1; membrane protein; 3.45A {	97.52
3vkg_A		3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	93.89
3vkg_A		3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	93.53
2akf_A		32	Coronin-1A; coiled coil, protein binding; 1.20A {S	91.82
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	90.68
3zux_A		332	Transporter, ASBTNM; transport protein, membrane p	90.13
2efr_A		155	General control protein GCN4 and tropomyosin 1 Al;	89.72
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	89.5
3u59_A		101	Tropomyosin beta chain; muscle contraction, actin,	89.03
1c1g_A		284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	88.55
3u1c_A		101	Tropomyosin alpha-1 chain; anti-parallel coiled co	86.61
2l0e_A		33	Sodium/hydrogen exchanger 1; transmembrane helix,	85.08

>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A	Back alignment and structure

Probab=97.52  E-value=5.6e-05  Score=82.07  Aligned_cols=102  Identities=15%  Similarity=0.087  Sum_probs=80.5

Q ss_pred             hHHHHHHHHHHHHHHHHhhcCChhHH----hhhhh--hHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHhhcc
Q 004361          652 GTKAIAEFGVVFLLFNIGLELSVERL----SSMKK--YVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSS  725 (759)
Q Consensus       652 iLe~LAEIGLIfLLFlaGLELDl~~L----Kr~~K--~iLvLAilgVLLp~~lVG~al~~lLGls~~~ALLLGaILSaTS  725 (759)
                      ...-+.+..+.++||.+|+|++.+.+    ++.++  .++..++.++++|++ +    ++.++.....+...+.+.+.|+
T Consensus        59 l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~-i----y~~~~~~~~~~~~gw~ip~ATd  133 (388)
T 1zcd_A           59 MLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPAL-L----YLAFNYADPITREGWAIPAATD  133 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHH-H----HGGGCCSSTTHHHHTSSSSCCC
T ss_pred             HHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHH-H----HHHHhcCChhhhhhhHHHHHHH
Confidence            45567888999999999999999877    55555  367788889999964 3    2445665566667777888899


Q ss_pred             HHHHHHHHHHcCCCC-ChhHHHHHHHHHHHHhhc
Q 004361          726 TAVVLQVLQERGEST-SRHGRATFSVLLFQVTLR  758 (759)
Q Consensus       726 paVVv~VLkELGLLn-Se~GRlaLSalVLqDIls  758 (759)
                      .+..+.+|..+|... +..+..+++.+++||+.+
T Consensus       134 IAfal~vL~~lg~~~p~~l~~flLalAvvDDl~a  167 (388)
T 1zcd_A          134 IAFALGVLALLGSRVPLALKIFLMALAIIDDLGA  167 (388)
T ss_dssp             HHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Confidence            999999999988764 445699999999999864

PyMOL of 1zcd

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*	Back alignment and structure

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*	Back alignment and structure

>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A	Back alignment and structure

>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*	Back alignment and structure

>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A	Back alignment and structure

>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}	Back alignment and structure

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A	Back alignment and structure

>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A	Back alignment and structure

>2l0e_A Sodium/hydrogen exchanger 1; transmembrane helix, membrane protein, NHE1; NMR {Homo sapiens}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00