Citrus Sinensis ID: 004374


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------76
MLVQDRTLPKSPKSQIRTSSHRFSDSKSLDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVSKSWSTVSPNGKSDWYSKQAEMVKEVVSTMPVHFQVNYKEAIRSDQSLIICSSELFYIPQHLAADFVDLVNLVGNVQLHYKVAIPMFFVSMDSPHNFDSVFSTMVYKRKPPTNSSTFYSAEAPAVHPWNVSSEQDFIKLIRIMAEGDPLLMELF
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccccccccccccccccccccccccccccccEEEEEEcccccHHHHHHHccccEEEEEEccccccccccccccccccHHHHHHccccccccccccccccHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccEEEEcccccccccEEccccccccccccccccccccccccccccEEEEEEcccHHEEEccccccccccEEEEEEccccccccccccccccccEEcccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccEEEEcccEEEEcccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccEEEEEEEcccccccHHHHHHHHHccccEEEEEcccccccccccccccHHHHHcHHHHHHHccccEEEEEEEcccccccHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccEEEcccEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHcccccccccccccEEEEccccccccccccccccEEEccccccHHHHHHHHHHHHcccccccccc
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHcccccHccccccccccccccccccccccccccccccccccEEEEEEcccccHHHHHHHcccccEEEEEEccccccccccccEEEEcHHHHHHccccHHHHcccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccEEEEEcccccccEEEcccccccccccccccccHHHHccccccccEEEcccccEEEEEccccccccHHHHHHHHccccccccccccccccccEEcccccEcEcccHcHHccccHHHccccccccccHHHHHHHHHHHHHHHHHHccEEEEcccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHcHHccccccccccccccEEccccccccccccHHHHHHHHHHHcHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHHccEEEEEccccccHccccHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEHHHHccccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHccccEEEcEEEEcccccccEEEcccEEEccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccEEEEEcccccccHHHccccccEEccEEcccHHHHHHHHHHHHccccHHHHHc
mlvqdrtlpkspksqirtsshrfsdsksldfstwVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQsksqehspnaiplpvinwnsiqpiadkssvysrfrseKWIVVSvdryptdsLKKLVKIKgwqvlaignsrtpknwnlkGAIFLSLDMqanlgfrvldflpydsyvrKSCGYLFAIQHGAKkifdaddrgdvigddlgkhfdvelvgegarqETILQyshenpnrtivnpyvhfgqrsvwprglplenvgeisheefytevfggkQFIQQGisnglpdvdsvfyftrkpsleafdirfddrvpkvalpqgmmvpvnsfntIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGyvvvypptvhrydkieaypfseekdlHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVgyqqprlmsleldrprasighgdrkefvprklpsvhlgveetgTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFsrytsaegflflqdDTILNYWNLLQADknklwitdkvskswstvspngksdwYSKQAEMVKEVVSTMPVHFQVNYKEairsdqsliicsselfyipqhlAADFVDLVNLVGNVQLHYKVAIPMffvsmdsphnfdsvFSTMvykrkpptnsstfysaeapavhpwnvsseQDFIKLIRIMAEGdpllmelf
mlvqdrtlpkspksqirtsshrfsdsksldfstWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWivvsvdryptdslkklvkikgwqvlaignsrtpknwNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPsleafdirfdDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRasighgdrkefvprklpsvhlgveetgtvsYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDkvskswstvspngksdwySKQAEMVKEVVSTMPVHFQVNYKEAIRSDQSLIICSSELFYIPQHLAADFVDLVNLVGNVQLHYKVAIPMFFVSMDSPHNFDSVFSTMVYKRKPPTNSSTFYSAEAPAVHPWNVSSEQDFIKLIRIMAEGDPLLMELF
MLVQDRTLPKSPKSQIRTSSHRFSDSKSLDFSTWVRDNLFKivtvllliatiaalSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFdaddrgdvigddlgKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVSKSWSTVSPNGKSDWYSKQAEMVKEVVSTMPVHFQVNYKEAIRSDQSLIICSSELFYIPQHLAADFVDLVNLVGNVQLHYKVAIPMFFVSMDSPHNFDSVFSTMVYKRKPPTNSSTFYSAEAPAVHPWNVSSEQDFIKLIRIMAEGDPLLMELF
****************************LDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLI**********AIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLEL**************FVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVSKSWSTVSPNGKSDWYSKQAEMVKEVVSTMPVHFQVNYKEAIRSDQSLIICSSELFYIPQHLAADFVDLVNLVGNVQLHYKVAIPMFFVSMDSPHNFDSVFSTMVYK*********FYSAEAPAVHPWNVSSEQDFIKLIRIMAEG********
****************************LDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLI***********************************RSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLE********************LPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVSKSWSTVSPNGKSDWYSKQAEMVKEVVSTMPVHFQVNYKEAIRSDQSLIICSSELFYIPQHLAADFVDLVNLVGNVQLHYKVAIPMFFVSMDSP*****VFSTMVYKRKPPTNSSTFYSAEAPAVHPWNVSSEQDFIKLIRIMAEGDPLLMELF
****************************LDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVS**********KSDWYSKQAEMVKEVVSTMPVHFQVNYKEAIRSDQSLIICSSELFYIPQHLAADFVDLVNLVGNVQLHYKVAIPMFFVSMDSPHNFDSVFSTMVYKRKPPTNSSTFYSAEAPAVHPWNVSSEQDFIKLIRIMAEGDPLLMELF
***************************SLDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVSKSWSTVSPNGKSDWYSKQAEMVKEVVSTMPVHFQVNYKEAIRSDQSLIICSSELFYIPQHLAADFVDLVNLVGNVQLHYKVAIPMFFVSMDSPHNFDSVFSTMVYKRKPPTNSSTFYSAEAPAVHPWNVSSEQDFIKLIRIMAEGDPLLMELF
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLVQDRTLPKSPKSQIRTSSHRFSDSKSLDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVSKSWSTVSPNGKSDWYSKQAEMVKEVVSTMPVHFQVNYKEAIRSDQSLIICSSELFYIPQHLAADFVDLVNLVGNVQLHYKVAIPMFFVSMDSPHNFDSVFSTMVYKRKPPTNSSTFYSAEAPAVHPWNVSSEQDFIKLIRIMAEGDPLLMELF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query758
255582589814 conserved hypothetical protein [Ricinus 0.996 0.927 0.802 0.0
224087016771 predicted protein [Populus trichocarpa] 0.998 0.981 0.805 0.0
225441834762 PREDICTED: uncharacterized protein LOC10 0.997 0.992 0.799 0.0
224139872771 predicted protein [Populus trichocarpa] 0.998 0.981 0.790 0.0
147852317762 hypothetical protein VITISV_011873 [Viti 0.997 0.992 0.796 0.0
449437678762 PREDICTED: uncharacterized protein LOC10 0.997 0.992 0.772 0.0
297739659726 unnamed protein product [Vitis vinifera] 0.949 0.991 0.779 0.0
356500503759 PREDICTED: uncharacterized protein LOC10 0.996 0.994 0.757 0.0
18405801771 uncharacterized protein [Arabidopsis tha 0.998 0.981 0.753 0.0
15230300765 uncharacterized protein [Arabidopsis tha 0.998 0.989 0.752 0.0
>gi|255582589|ref|XP_002532077.1| conserved hypothetical protein [Ricinus communis] gi|223528259|gb|EEF30311.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score = 1300 bits (3365), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/765 (80%), Positives = 689/765 (90%), Gaps = 10/765 (1%)

Query: 2   LVQDRTLPKSPKSQIRT-------SSHRFSDSKSLDFSTWVRDNLFKIVTVLLLIATIAA 54
           +VQ+R  PKSPKS   T       +++RFS SKSLDFSTW  +NL+KI+    LIAT+AA
Sbjct: 50  VVQERATPKSPKSPRTTLPTVNHHNNYRFSPSKSLDFSTWFTENLYKIIICFFLIATVAA 109

Query: 55  LSFLRNFTDTASLI--QSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVS 112
           + F RN  DTA+ +  QSKSQ      +P P INWN I+PI D +S +  FR+E+WIV S
Sbjct: 110 VFFFRNTGDTAAFLYLQSKSQPIE-KTLPFPHINWNQIKPITDSASPFVNFRTERWIVAS 168

Query: 113 VDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDS 172
           V  YP+DSLKKLVKIKGWQ+LAIGNS+TPK W LKG I+LSL+ QA+LGFRV+DF+P+DS
Sbjct: 169 VSDYPSDSLKKLVKIKGWQLLAIGNSKTPKGWALKGCIYLSLEQQASLGFRVVDFVPFDS 228

Query: 173 YVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPN 232
           YVRKS GYLFAIQHGAKKIFDADDRG+VIGDDLGKHFDVELVGEGARQETILQYSHEN N
Sbjct: 229 YVRKSVGYLFAIQHGAKKIFDADDRGEVIGDDLGKHFDVELVGEGARQETILQYSHENEN 288

Query: 233 RTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFY 292
           RT+VNPY+HFGQRSVWPRGLPLENVGEI HEEFYT+VFGGKQFIQQGISNGLPDVDSVFY
Sbjct: 289 RTVVNPYIHFGQRSVWPRGLPLENVGEIGHEEFYTQVFGGKQFIQQGISNGLPDVDSVFY 348

Query: 293 FTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVL 352
           FTRK  LE+FDIRFD+  PKVALPQG+MVP+NSFNTIYQSSAFW LMLPVSVSTMASDVL
Sbjct: 349 FTRKSGLESFDIRFDEHAPKVALPQGIMVPLNSFNTIYQSSAFWGLMLPVSVSTMASDVL 408

Query: 353 RGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHR 412
           RG+WGQRLLWEIGGYVVVYPPTVHRYD+IEAYPFSEEKDLHVNVGRLIKFL++WRS KHR
Sbjct: 409 RGYWGQRLLWEIGGYVVVYPPTVHRYDRIEAYPFSEEKDLHVNVGRLIKFLIAWRSTKHR 468

Query: 413 FFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDR 472
            FEK+LELS++MAEEGFWTE+DVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDR
Sbjct: 469 LFEKILELSYAMAEEGFWTEQDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDR 528

Query: 473 KEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYG 532
           +EF+PRKLPSVHLGVEE GTV+YEIGNLIRWRKNFGN+VLIMFC+GPVERTALEWRLLYG
Sbjct: 529 REFIPRKLPSVHLGVEEIGTVNYEIGNLIRWRKNFGNIVLIMFCTGPVERTALEWRLLYG 588

Query: 533 RIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQ 592
           RIFKTV+ILS+QKNEDLAVE G LEQ+YRHLPKIF R+TSAEGFLFL+DDT+LNYWNLLQ
Sbjct: 589 RIFKTVVILSQQKNEDLAVEEGNLEQLYRHLPKIFDRFTSAEGFLFLKDDTVLNYWNLLQ 648

Query: 593 ADKNKLWITDKVSKSWSTVSPNGKSDWYSKQAEMVKEVVSTMPVHFQVNYKEAIRSDQSL 652
           ADK+KLWITDKVSKSWSTV+ NG SDWY+KQAEMVK VV +MPVHFQVNYK+A+++DQS+
Sbjct: 649 ADKSKLWITDKVSKSWSTVATNGNSDWYAKQAEMVKRVVGSMPVHFQVNYKDAMKNDQSI 708

Query: 653 IICSSELFYIPQHLAADFVDLVNLVGNVQLHYKVAIPMFFVSMDSPHNFDSVFSTMVYKR 712
            ICSSE+FYIP+H   DFVDLV+LVG+ ++H  +AIPMFFVSMDSP NFDSV STMVYKR
Sbjct: 709 TICSSEIFYIPRHFVPDFVDLVSLVGDQEIHNNIAIPMFFVSMDSPQNFDSVLSTMVYKR 768

Query: 713 KPPTNSSTFYSAEAPAVHPWNVSSEQDFIKLIRIMAEGDPLLMEL 757
           KPP+N+ST Y+A+A AVHPWNVSSEQDFIKL+RIMAEGDPLLMEL
Sbjct: 769 KPPSNNSTLYNAQASAVHPWNVSSEQDFIKLVRIMAEGDPLLMEL 813




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087016|ref|XP_002308029.1| predicted protein [Populus trichocarpa] gi|222854005|gb|EEE91552.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225441834|ref|XP_002284060.1| PREDICTED: uncharacterized protein LOC100264133 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224139872|ref|XP_002323318.1| predicted protein [Populus trichocarpa] gi|222867948|gb|EEF05079.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147852317|emb|CAN82225.1| hypothetical protein VITISV_011873 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449437678|ref|XP_004136618.1| PREDICTED: uncharacterized protein LOC101214137 [Cucumis sativus] gi|449523175|ref|XP_004168600.1| PREDICTED: uncharacterized protein LOC101224948 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297739659|emb|CBI29841.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356500503|ref|XP_003519071.1| PREDICTED: uncharacterized protein LOC100786801 [Glycine max] Back     alignment and taxonomy information
>gi|18405801|ref|NP_565960.1| uncharacterized protein [Arabidopsis thaliana] gi|2335100|gb|AAC02770.1| expressed protein [Arabidopsis thaliana] gi|15810461|gb|AAL07118.1| unknown protein [Arabidopsis thaliana] gi|330254936|gb|AEC10030.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15230300|ref|NP_191301.1| uncharacterized protein [Arabidopsis thaliana] gi|6706413|emb|CAB66099.1| putative protein [Arabidopsis thaliana] gi|53828547|gb|AAU94383.1| At3g57420 [Arabidopsis thaliana] gi|59958348|gb|AAX12884.1| At3g57420 [Arabidopsis thaliana] gi|110739068|dbj|BAF01451.1| hypothetical protein [Arabidopsis thaliana] gi|332646132|gb|AEE79653.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query758
TAIR|locus:2103473765 AT3G57420 [Arabidopsis thalian 0.998 0.989 0.736 1.3e-313
TAIR|locus:2054371771 AT2G41770 "AT2G41770" [Arabido 0.997 0.980 0.730 6.5e-312
WB|WBGene00022654802 ZK105.3 [Caenorhabditis elegan 0.467 0.441 0.304 6.7e-48
WB|WBGene00018502798 F46F5.11 [Caenorhabditis elega 0.484 0.459 0.301 4.3e-47
WB|WBGene00017173806 F02C9.2 [Caenorhabditis elegan 0.536 0.504 0.288 5.4e-47
WB|WBGene00010168800 F56H6.7 [Caenorhabditis elegan 0.455 0.431 0.320 3.2e-46
WB|WBGene00010170803 F56H6.9 [Caenorhabditis elegan 0.459 0.433 0.298 6.1e-45
WB|WBGene00008472805 E03H4.4 [Caenorhabditis elegan 0.493 0.464 0.301 3e-44
WB|WBGene00018914796 F56A4.6 [Caenorhabditis elegan 0.486 0.463 0.301 1.1e-43
WB|WBGene00021574779 Y45G12C.11 [Caenorhabditis ele 0.335 0.326 0.295 2.2e-42
TAIR|locus:2103473 AT3G57420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3008 (1063.9 bits), Expect = 1.3e-313, P = 1.3e-313
 Identities = 563/764 (73%), Positives = 648/764 (84%)

Query:     1 MLVQDRTLPKSPKSQIRT--SSHRFSDSKSLDFSTWVRDNLFKXXXXXXXXXXXXXXSFL 58
             MLVQDR  PK PKS+IR   S  RF++ K LDFS+WV DN+++               FL
Sbjct:     1 MLVQDRVAPKPPKSRIRELPSRDRFAEPKILDFSSWVSDNVYRIVIIFLFIVTVAAFFFL 60

Query:    59 RNFTDTASLIQSKSQE-HSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYP 117
              N TDTASL+  +SQ   S  ++  P INWNSIQ ++DK+S Y+ FR+EKWIVVSV ++P
Sbjct:    61 YNTTDTASLLCFQSQSTQSLQSLTRPQINWNSIQIVSDKTSPYASFRTEKWIVVSVTKHP 120

Query:   118 TDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKS 177
             T+ LK LVKIKGWQVLAIGNS TPK+WNLKGAIFLSLD QA L +R+LD LPYDS+VRKS
Sbjct:   121 TEELKGLVKIKGWQVLAIGNSLTPKDWNLKGAIFLSLDAQAELNYRILDHLPYDSFVRKS 180

Query:   178 CGYLFAIQHGAKKIFXXXXXXXXXXXXXXKHFDVELVGEGARQETILQYSHENPNRTIVN 237
              GYLFAIQHGAKKIF              KHFDVELVGE ARQE ILQYSHENPNRT+VN
Sbjct:   181 VGYLFAIQHGAKKIFDADDRGEVIDGDLGKHFDVELVGEDARQEPILQYSHENPNRTVVN 240

Query:   238 PYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKP 297
             PY+HFGQRSVWPRGLPLENVGEI+HEE+YTEVFGGKQFIQQGISNGLPDVDSV+Y TRK 
Sbjct:   241 PYIHFGQRSVWPRGLPLENVGEINHEEYYTEVFGGKQFIQQGISNGLPDVDSVYYSTRKT 300

Query:   298 SLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWG 357
             + E FDIRFD+  PKVALPQGMMVPVNSFNT+Y SSAFW LMLPVSVS+MASDV+RG+WG
Sbjct:   301 TFEPFDIRFDEHSPKVALPQGMMVPVNSFNTLYHSSAFWGLMLPVSVSSMASDVIRGYWG 360

Query:   358 QRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKV 417
             QRLLWE+GGYV VYPPTVHRYD++EAYPFS+EKDLH+NVGRLIKFL++WRSNKHRFFE +
Sbjct:   361 QRLLWELGGYVAVYPPTVHRYDRVEAYPFSDEKDLHINVGRLIKFLLAWRSNKHRFFETI 420

Query:   418 LELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVP 477
             L+LS  MAE+GFWTE DVKFTAAWLQDL+ VGYQQPRLMSLELDRPRA+IGHGDRKEFVP
Sbjct:   421 LDLSFVMAEQGFWTELDVKFTAAWLQDLLMVGYQQPRLMSLELDRPRATIGHGDRKEFVP 480

Query:   478 RKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKT 537
             RKLPSVHLGVEE GTVS EIGNLI+WRKNFGNVVLIMFC+GPVERTALEWRLLYGRIFKT
Sbjct:   481 RKLPSVHLGVEEIGTVSSEIGNLIKWRKNFGNVVLIMFCNGPVERTALEWRLLYGRIFKT 540

Query:   538 VIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNK 597
             V+ILS +KN DL V+  +L+ +Y+ LPKIF RY+SA+GF+F++DDT+LNYWNLLQADK K
Sbjct:   541 VVILSSRKNSDLYVQEAKLDHIYKRLPKIFDRYSSADGFVFVEDDTVLNYWNLLQADKTK 600

Query:   598 LWITDKVSKSWSTVSPNGKSDWYSKQAEMVKEVVSTMPVHFQVNYKEAIR-SD-QSLIIC 655
             LW TDKV++SW+TV P G SDWYS QAE+VK++VSTMPVHFQVNYKEA + SD  SL +C
Sbjct:   601 LWTTDKVTESWTTVRPAGNSDWYSVQAELVKKIVSTMPVHFQVNYKEATKNSDGTSLTMC 660

Query:   656 SSELFYIPQHLAADFVDLVNLVGNVQLHYKVAIPMFFVSMDSPHNFDSVFSTMVYKRKPP 715
             SSE+FY+P+   +DF DLVNLVG++ LHYKVA+PMFF+SMDSP NFD V  +MVYK +P 
Sbjct:   661 SSEVFYVPKRFVSDFTDLVNLVGDMDLHYKVAVPMFFLSMDSPQNFDPVLGSMVYKSEPA 720

Query:   716 T-NSS-TFYSAEAPAVHPWNVSSEQDFIKLIRIMAEGDPLLMEL 757
             + NSS + YSAEAPAVHPW++S+EQDFIKL+R MAEGDPLLMEL
Sbjct:   721 SLNSSLSLYSAEAPAVHPWSISNEQDFIKLVREMAEGDPLLMEL 764




GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005618 "cell wall" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2054371 AT2G41770 "AT2G41770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00022654 ZK105.3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00018502 F46F5.11 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00017173 F02C9.2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00010168 F56H6.7 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00010170 F56H6.9 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00008472 E03H4.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00018914 F56A4.6 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00021574 Y45G12C.11 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query758
pfam03385390 pfam03385, DUF288, Protein of unknown function, DU 2e-07
>gnl|CDD|217526 pfam03385, DUF288, Protein of unknown function, DUF288 Back     alignment and domain information
 Score = 53.3 bits (128), Expect = 2e-07
 Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 15/118 (12%)

Query: 349 SDVLRGFWGQRLLWEIGGYVVVYPPT-------VHRYDKIEAYPFSEEKDLHVNVGRLIK 401
           +D+ R F  Q++L  + G  V + PT        H Y K     F +EK ++ + G++I+
Sbjct: 3   TDIWRSFISQKIL-HLSGLTVSFVPTNAVQFRNAHNYLK----DFKDEKQVYEDSGKMIE 57

Query: 402 FLVSW---RSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLM 456
           FL +W     N       + +L + + +   W + D      +L DL  +G++ P L+
Sbjct: 58  FLHNWKCSTENSTVLENCIKQLLNDLVKVKLWGKEDASLMEMFLNDLKNMGFEFPSLL 115


Length = 390

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 758
PF03385390 DUF288: Protein of unknown function, DUF288; Inter 100.0
PLN03180346 reversibly glycosylated polypeptide; Provisional 100.0
PF03214348 RGP: Reversibly glycosylated polypeptide; InterPro 100.0
>PF03385 DUF288: Protein of unknown function, DUF288; InterPro: IPR005049 This is a protein family of unknown function Back     alignment and domain information
Probab=100.00  E-value=3e-81  Score=662.55  Aligned_cols=276  Identities=35%  Similarity=0.604  Sum_probs=242.9

Q ss_pred             cchhhHHHHHHHHHHHHcCcEEEEcCCeeeeecCCCCC--CCchhhhHHHhhhHHHHHhccccCCcc---cHHHHHHHHH
Q 004374          347 MASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAY--PFSEEKDLHVNVGRLIKFLVSWRSNKH---RFFEKVLELS  421 (758)
Q Consensus       347 R~tDIWRgY~~QrlLw~~G~~v~F~pP~v~q~RN~H~~--Df~~E~~ly~~sg~lv~fL~~W~~~~~---~l~e~i~~L~  421 (758)
                      ||||||||||+|||||++|++|+|+||+|+|+||+|+|  ||++|+|||+++|+||+||++|+|+.+   +|++||++|+
T Consensus         1 RvTDIWRSY~aQRLLW~~G~~VsF~PpnV~Q~RNaHdYLkDF~DEk~LY~~sG~LV~FL~~W~~~~~n~~~L~~~Il~L~   80 (390)
T PF03385_consen    1 RVTDIWRSYWAQRLLWLSGGTVSFVPPNVVQFRNAHDYLKDFKDEKDLYEDSGRLVEFLHEWRCSKGNSSTLFECILDLY   80 (390)
T ss_pred             CchhHHHHHHHHHHHHHcCCeEEEcCCceeecccccccccchHHHHHHHHhHHHHHHHHHhcCCCCCchhhHHHHHHHHH
Confidence            89999999999999999999999999999999999999  999999999999999999999999754   6999999999


Q ss_pred             HHHHHcCCcchhhHHHHHHHHHHHHhcCCCCCccccccccCCC-CCCCCCCCC--------cc---cCCCCCcccccccc
Q 004374          422 HSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPR-ASIGHGDRK--------EF---VPRKLPSVHLGVEE  489 (758)
Q Consensus       422 ~~m~e~gfw~~~Dv~l~~aWL~DL~~vGy~~P~l~~~~~~~~~-~~~~~~~~~--------~f---~p~~~~~~~~~~~~  489 (758)
                      ++|+|+|||+++||+||+|||+||++|||+||+|++.++++|| +|.+|++|.        ||   +|++..  .+++++
T Consensus        81 ~~m~e~GfW~~~Dv~L~~AWL~DL~sVGY~fP~L~~~~~~dpYs~s~net~R~vNCRRm~leF~lvdp~~~~--~~~~~r  158 (390)
T PF03385_consen   81 VAMAEEGFWGEEDVKLMQAWLQDLKSVGYKFPRLRSEEYRDPYSPSTNETSRDVNCRRMHLEFELVDPKKEE--SQNIKR  158 (390)
T ss_pred             HHHHHcCCCcHHHHHHHHHHHHHHHHHHhhchhhhhcccCCCCCCCCCccccccccccccceeeccCCcccc--cHHHHH
Confidence            9999999999999999999999999999999999999999999 666666674        56   666643  678999


Q ss_pred             ccchhhcccchhhhhcccC----------------------------CEEEEEEcCccccccHHHHHHHhhccCCEEEEe
Q 004374          490 TGTVSYEIGNLIRWRKNFG----------------------------NVVLIMFCSGPVERTALEWRLLYGRIFKTVIIL  541 (758)
Q Consensus       490 ~~~~~~~~g~~~~wr~~~~----------------------------nvVLIv~~n~p~~~~~~~~r~lY~p~F~~VVf~  541 (758)
                      |.||++||||+++||+++|                            |+||||+|||||+++|+++||||||||++||||
T Consensus       159 a~qKlnyFGDl~~WC~etg~s~~~~~fpsp~QL~~~h~~~~vl~~~~~svlivvnn~pw~ygmgliqrlYqpyFa~viFC  238 (390)
T PF03385_consen  159 AEQKLNYFGDLVDWCNETGYSNLSKYFPSPEQLAEQHDESYVLQKNLNSVLIVVNNYPWKYGMGLIQRLYQPYFAMVIFC  238 (390)
T ss_pred             HHHHHHhhchHHHHHhccCCccccccCCCHHHHHHHhhcceeecccCceeEEEecCCchhhhHHHHHHHhcccccEEEec
Confidence            9999999999999999998                            799999999999999999999999999999999


Q ss_pred             eC--------CCCCCc-----------ccccccchhhhhhHHHHHh-hcCCCceEEEeecceeecccccccCCCCccccc
Q 004374          542 SE--------QKNEDL-----------AVEAGQLEQVYRHLPKIFS-RYTSAEGFLFLQDDTILNYWNLLQADKNKLWIT  601 (758)
Q Consensus       542 g~--------~~n~~~-----------~ve~~~g~~~Y~~L~k~~~-~~p~~~GYl~~~DD~ifN~Wn~~~~dk~kiW~~  601 (758)
                      |+        .+|.++           .+|+++|+++||||.++-+ +++|++|||+|+||+|||+||++++++  +...
T Consensus       239 G~~yp~~~~~~dn~t~~~~pinyih~~~~e~~~g~~~y~c~~~v~em~~~nv~gy~~~~dd~ifn~w~~id~s~--v~h~  316 (390)
T PF03385_consen  239 GSWYPDQFSDQDNYTSTIHPINYIHMNPAEIHRGYFAYHCLTLVKEMGLQNVEGYFLMADDAIFNIWQRIDYSR--VHHL  316 (390)
T ss_pred             CCcCchhhcCCccCccccCCcceeecCHHHHhcchhhHHHHHHHHHhcCCCcceEEEecchhHhhhhhhcchhh--hhee
Confidence            95        344443           2788999999999765544 999999999999999999999999986  3333


Q ss_pred             cccccceeecCCCCCcccch-hH--HHHHHHHHhcC
Q 004374          602 DKVSKSWSTVSPNGKSDWYS-KQ--AEMVKEVVSTM  634 (758)
Q Consensus       602 ~~v~~sw~t~~~~gg~dW~~-k~--~~~vkkav~~~  634 (758)
                      ++        ...+...||. ++  -.++++++..+
T Consensus       317 ~g--------~~~~~~~ww~~~~~G~~Aa~~iv~~i  344 (390)
T PF03385_consen  317 TG--------SYENSNPWWPNKDYGIPAAKRIVETI  344 (390)
T ss_pred             cc--------CCCCCCCcccccccchHHHHHHHHHh
Confidence            22        2455445544 43  27888877665



>PLN03180 reversibly glycosylated polypeptide; Provisional Back     alignment and domain information
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query758
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.9 bits (118), Expect = 3e-06
 Identities = 63/382 (16%), Positives = 110/382 (28%), Gaps = 114/382 (29%)

Query: 378 YDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNK-HRFFEKVLELSHSMAEEGFWTERDVK 436
            D I     +    L     RL   L+S +     +F E+VL +++              
Sbjct: 51  IDHIIMSKDAVSGTL-----RLFWTLLSKQEEMVQKFVEEVLRINYK------------- 92

Query: 437 FTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGD----RKEFVPRKLP----------- 481
               +L   I    +QP +M+      R  + + D     K  V R  P           
Sbjct: 93  ----FLMSPIKTEQRQPSMMTRMYIEQRDRL-YNDNQVFAKYNVSRLQPYLKLRQALLEL 147

Query: 482 ------SVHLGVEETG-TV-------SYEI----GNLIRWRKNFGNVVLIMFCSGPVERT 523
                  +  GV  +G T        SY++       I W  N  N      C+ P    
Sbjct: 148 RPAKNVLID-GVLGSGKTWVALDVCLSYKVQCKMDFKIFW-LNLKN------CNSPETVL 199

Query: 524 ALEWRLLYGRIFKTVIILSEQ-KNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFL--- 579
            +  +LLY +I       S+   N  L     ++  +   L ++          L L   
Sbjct: 200 EMLQKLLY-QIDPNWTSRSDHSSNIKL-----RIHSIQAELRRLLKSKPYENCLLVLLNV 253

Query: 580 QDDTILNYWN------LLQADKNKLWITDKVSKSWSTVSP-------------------- 613
           Q+    N +N      L    K    +TD +S + +T                       
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQ---VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310

Query: 614 -NGKSDWYSKQAE--------MVKEVVSTMPVHFQVNYKEAIRSDQSLIICSSELFYIPQ 664
            + +     ++          ++ E +      +  N+K       + II SS     P 
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD-NWKHVNCDKLTTIIESSLNVLEPA 369

Query: 665 HLAADFVDLVNLVGNVQLHYKV 686
                F  L     +  +   +
Sbjct: 370 EYRKMFDRLSVFPPSAHIPTIL 391


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00