Citrus Sinensis ID: 004397

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750------

MSGSGGVESGERQVALSQDNLKGNKLLPQRYDSLDLESGAVSGYHRRSSKAMKWSVILQLAFQSIGIVYGDIGTSPLYVFSSTFPNGINHADDVLGVLSLILYTLTLIPLIKYVFIVLHANDNGDGGTFALYSLICRYANVGLVPSQQAEDSNVSNFQLELPGNKRSRMASSLKSKLENSRVAKFFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQRLGTDKVGYTFAPILLVWFAFIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAAWISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGQASFLRKHPDLVSNTFFKSVPGPVYWPMFVVAVLAAIIASQALISGTFSIIQQSLALGCFPHVKIVHTSSEYEGQVYVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSSVLYKFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEHKLSPRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPISKVPADERFIFRRVEPKELNMYRCVGRYGYMDVRDQEEPFERILVENLKQFIRDDYKFSPQSQESAHDSDEDTIHGVQKEALERDIEAVDKAWEAGAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKKNLRGSETVFDIPHKRMVKVGMTYEL

ccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcEEEccccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHEEEEEEEcccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccccEEEHHHHHHHHHHHHHccccccHHcccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEcHHHHHHHHHHHHHEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEcEEEEEEccccccHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEEcccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc

ccccccccccccccccccccccccccHccccccccHHHcccccccccccccccHHHHHHHHHHHccEEEcccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHHccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHEHEccccccHHHHHHHHHcccEEccccccccEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccHEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHEEEEHcccccHHHHHHHccccccEEcccEEEEEHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEEEEEEc

msgsggvesgeRQVALSqdnlkgnkllpqrydsldlesgavsgyhrrsskaMKWSVILQLAFQSIGivygdigtsplyvfsstfpnginhadDVLGVLSLILYTLTLIPLIKYVFIVLHandngdggtFALYSLICRYanvglvpsqqaedsnvsnfqlelpgnkrsRMASSLKSKLENSRVAKFFLFFATLLGtsmligdgvltPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQrlgtdkvgytfAPILLVWFAFIAGIGiyniihydptvikalnprYIVDYFRNNQQAAWISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGqasflrkhpdlvsntffksvpgpvywPMFVVAVLAAIIASQALISGTFSIIQQSlalgcfphvkivhtsseyegqvyvpeVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSSVLykfdqggylPLIFAAVLMTIMYVWNNVYRRKYFYEVEHklsprrindiaantnicripgLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIkslpiskvpaderfifrrvepkelnmyrcvgrygymdvrdqeePFERILVENLKQFIrddykfspqsqesahdsdedtiHGVQKEALERDIEAVDKAWEAGAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKknlrgsetvfdiphkrmvKVGMTYEL

msgsggvesgeRQVALSQDNLKGNKLLPQRYDSLDLESGAVSGYHRRSSKAMKWSVILQLAFQSIGIVYGDIGTSPLYVFSSTFPNGINHADDVLGVLSLILYTLTLIPLIKYVFIVLHANDNGDGGTFALYSLICRYANVGLVPSQQAEDSNVSNfqlelpgnkrSRMASSLKSKLENSRVAKFFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQRLGTDKVGYTFAPILLVWFAFIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAAWISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGQASFLRKHPDLVSNTFFKSVPGPVYWPMFVVAVLAAIIASQALISGTFSIIQQSLALGCFPHVKIVHTSSEYEGQVYVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSSVLYKFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEHKLSPRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSlpiskvpaderfifrrvepkelnmyrcVGRYGYMDVRDQEEPFERILVENLKQFIRDDYKFSPqsqesahdsdedtiHGVQKEALERDIEAVDKAWEAGAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKKNlrgsetvfdiphkrmvkvgmtyel

MSGSGGVESGERQVALSQDNLKGNKLLPQRYDSLDLESGAVSGYHRRSSKAMKWSVILQLAFQSIGIVYGDIGTSPLYVFSSTFPNGINHADDVlgvlslilytltlipliKYVFIVLHANDNGDGGTFALYSLICRYANVGLVPSQQAEDSNVSNFQLELPGNKRSRMASSLKSKLENSRVAKFFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQRLGTDKVGYTFAPILLVWFAFIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAAWISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGQASFLRKHPDLVSNTFFKSVPGPVYWPMFvvavlaaiiasqalisGTFSIIQQSLALGCFPHVKIVHTSSEYEGQVYVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSSVLYKFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEHKLSPRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPISKVPADERFIFRRVEPKELNMYRCVGRYGYMDVRDQEEPFERILVENLKQFIRDDYKFSPQSQESAHDSDEDTIHGVQKEALERDIEAVDKAWEAGAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKKNLRGSETVFDIPHKRMVKVGMTYEL

*************************************************KAMKWSVILQLAFQSIGIVYGDIGTSPLYVFSSTFPNGINHADDVLGVLSLILYTLTLIPLIKYVFIVLHANDNGDGGTFALYSLICRYANVGLV************************************RVAKFFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQRLGTDKVGYTFAPILLVWFAFIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAAWISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGQASFLRKHPDLVSNTFFKSVPGPVYWPMFVVAVLAAIIASQALISGTFSIIQQSLALGCFPHVKIVHTSSEYEGQVYVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSSVLYKFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEHKLSPRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPISKVPADERFIFRRVEPKELNMYRCVGRYGYMDVRDQEEPFERILVENLKQFIRDDY**************************ERDIEAVDKAWEAGAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKKNLRGSETVFDIPHKRMVKV******

********************************************************ILQLAFQSIGIVYGDIGTSPLYVFSSTFPNGINHADDVLGVLSLILYTLTLIPLIKYVFIVLHANDNGDGGTFALYSLICRYANVGLVPSQQAEDS**********************SKLENSRVAKFFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQRLGTDKVGYTFAPILLVWFAFIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAAWISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGQASFLRKHPDLVSNTFFKSVPGPVYWPMFVVAVLAAIIASQALISGTFSIIQQSLALGCFPHVKIVHTSSEYEGQVYVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSSVLYKFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEHKLSPRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPISKVPADERFIFRRVEPKELNMYRCVGRYGYMDVRDQEEPFERILVENLKQFIRDD*****************************DIEAVDKAWEAGAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKKNLRGSETVFDIPHKRMVKVGMTYEL

************QVALSQDNLKGNKLLPQRYDSLDLESGAVSGYHRRSSKAMKWSVILQLAFQSIGIVYGDIGTSPLYVFSSTFPNGINHADDVLGVLSLILYTLTLIPLIKYVFIVLHANDNGDGGTFALYSLICRYANVGLVPSQQAEDSNVSNFQLELPGN************LENSRVAKFFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQRLGTDKVGYTFAPILLVWFAFIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAAWISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGQASFLRKHPDLVSNTFFKSVPGPVYWPMFVVAVLAAIIASQALISGTFSIIQQSLALGCFPHVKIVHTSSEYEGQVYVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSSVLYKFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEHKLSPRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPISKVPADERFIFRRVEPKELNMYRCVGRYGYMDVRDQEEPFERILVENLKQFIRDDYKF***************IHGVQKEALERDIEAVDKAWEAGAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKKNLRGSETVFDIPHKRMVKVGMTYEL

*********************************LDLESGAVSG******KAMKWSVILQLAFQSIGIVYGDIGTSPLYVFSSTFPNGINHADDVLGVLSLILYTLTLIPLIKYVFIVLHANDNGDGGTFALYSLICRYANVGLVPSQQAEDSNVSNFQLELPGNKRSRMASSLKSKLENSRVAKFFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQRLGTDKVGYTFAPILLVWFAFIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAAWISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGQASFLRKHPDLVSNTFFKSVPGPVYWPMFVVAVLAAIIASQALISGTFSIIQQSLALGCFPHVKIVHTSSEYEGQVYVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSSVLYKFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEHKLSPRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPISKVPADERFIFRRVEPKELNMYRCVGRYGYMDVRDQEEPFERILVENLKQFIRDDYK***********************ALERDIEAVDKAWEAGAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKKNLRGSETVFDIPHKRMVKVGMTYEL

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		756	2.2.26 [Sep-21-2011]
Q5JK32		781	Potassium transporter 5 O	yes	no	0.992	0.960	0.531	0.0
Q9M7K4		785	Potassium transporter 5 O	yes	no	0.982	0.946	0.518	0.0
Q6H4M2		742	Potassium transporter 19	yes	no	0.955	0.973	0.504	0.0
Q6H4L9		747	Potassium transporter 20	no	no	0.960	0.971	0.498	0.0
Q6VVA6		801	Potassium transporter 1 O	no	no	0.984	0.928	0.488	0.0
Q84MS4		811	Potassium transporter 27	no	no	0.961	0.896	0.440	0.0
Q84MS3		811	Probable potassium transp	no	no	0.955	0.890	0.440	0.0
Q6H4R6		877	Potassium transporter 23	no	no	0.960	0.827	0.459	0.0
Q75G84		799	Potassium transporter 21	no	no	0.988	0.934	0.443	0.0
O80739		827	Putative potassium transp	no	no	0.960	0.877	0.454	0.0

>sp\|Q5JK32\|HAK5_ORYSJ Potassium transporter 5 OS=Oryza sativa subsp. japonica GN=HAK5 PE=2 SV=2	Back alignment and function desciption

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/779 (53%), Positives = 557/779 (71%), Gaps = 29/779 (3%)

Query: 2   SGSGGVESGERQVALSQDNLKGNKLLPQRYDSLDLESGAVSGYHRRSSKAMKWSVILQLA 61
           S +GG E G      S+  L+    L QR+DSL +E+G + G    ++K + W+  L LA
Sbjct: 8   SSNGGAERGPNAAFESEKTLQTTTRL-QRFDSLHMEAGKIPGGQSHTAK-VGWATTLHLA 65

Query: 62  FQSIGIVYGDIGTSPLYVFSSTFPNGINHADDVLGVLSLILYTLTLIPLIKYVFIVLHAN 121
           FQSIG+VYGD+GTSPLYVFSSTF NGI   +D+LGV+SLI+YT+ L+PLIKY FIVL AN
Sbjct: 66  FQSIGVVYGDMGTSPLYVFSSTFTNGIKDTNDILGVMSLIIYTVVLLPLIKYCFIVLRAN 125

Query: 122 DNGDGGTFALYSLICRYANVGLVPSQQAEDSNVSNFQLELPGNKRSRMASSLKSKLENSR 181
           DNGDGGTFALYSLI RYA + L+P+QQAED+ VS+++LE P N+  R A  +K K+ENS 
Sbjct: 126 DNGDGGTFALYSLISRYARISLIPNQQAEDAMVSHYKLESPSNRVKR-AHWIKEKMENSP 184

Query: 182 VAKFFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLF 241
             K  LF  T+L TSM+IGDGVLTPCISVLSAVGGIKE+  ++T+ ++  I+ AIL+ LF
Sbjct: 185 NFKIILFLVTILATSMVIGDGVLTPCISVLSAVGGIKESAKSLTQGQIAGIAIAILIVLF 244

Query: 242 LFQRLGTDKVGYTFAPILLVWFAFIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAA 301
           L QR GTDKVGY+F PI+L WF FIAG G+YN+  +D  V+KA NP+YIVDYF  N +  
Sbjct: 245 LVQRFGTDKVGYSFGPIILTWFIFIAGTGVYNLFKHDTGVLKAFNPKYIVDYFERNGKQG 304

Query: 302 WISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGQASFLRKHPDLVS 361
           WISLGG+ILC TG EA+FAD+GHF V +I+I    V+ P+++LAY GQA++LR +P+ V+
Sbjct: 305 WISLGGVILCITGTEAMFADLGHFNVRAIQIGFSVVLLPSVLLAYIGQAAYLRIYPEHVA 364

Query: 362 NTFFKSVPGPVYWPMFVVAVLAAIIASQALISGTFSIIQQSLALGCFPHVKIVHTSSEYE 421
           +TF+KS+P P+YWP FVVAV AAIIASQA+ISG F+II QS  LGCFP V+++HTS+++ 
Sbjct: 365 DTFYKSIPDPLYWPTFVVAVAAAIIASQAMISGAFAIIAQSQILGCFPRVRVIHTSTKFH 424

Query: 422 GQVYVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNI 481
           GQVY+PE+NY+LM+ C+ VT  F+TT KIGNAYGIAVVFVM +T+  + L+M+MIWK+++
Sbjct: 425 GQVYIPEINYVLMVLCVAVTAIFQTTDKIGNAYGIAVVFVMFITTLLVTLVMVMIWKTSL 484

Query: 482 LYVISYVLIIGSVELIYLSSVLYKFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEH 541
           L++  + +I G  ELIYLSS  YKF QGGYLPL+F+A+LM IM  W+ V+  +Y YE+ +
Sbjct: 485 LWIALFPVIFGGAELIYLSSAFYKFTQGGYLPLVFSAILMFIMATWHYVHVHRYKYELRN 544

Query: 542 KLSPRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLP 601
           K+S   + ++A   N+ R+PG+   YSELVQGIPPI  H VE VP++HSVLV +SIK LP
Sbjct: 545 KVSNNYVAELAVKQNLARLPGIGFLYSELVQGIPPILPHLVEKVPSIHSVLVIISIKYLP 604

Query: 602 ISKVPADERFIFRRVEPKELNMYRCVGRYGYMDVRDQEEPFERILVENLKQFIRDDYKFS 661
           ISK+   ERF+FR VEPKE  ++RCV RYGY D  +    FE +++ENLKQFI ++  +S
Sbjct: 605 ISKIETKERFLFRYVEPKEYRVFRCVVRYGYNDKVEDPAEFESLVIENLKQFIHEESLYS 664

Query: 662 PQSQ------------------------ESAHDSDEDTIHGVQKEALERDIEAVDKAWEA 697
             S                          S ++SD+ T     +     +I+++ K    
Sbjct: 665 QSSHSLEGESIKEIGGVTDPTSEVQDAMSSRNNSDQHTTE--PRNGCMDEIQSIHKEMGN 722

Query: 698 GAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKKNLRGSETVFDIPHKRMVKVGMTYEL 756
           G VHL+GE  VVA   A   K+++++Y +NF++KN R  E +  +PH R+++VGMTYE+
Sbjct: 723 GVVHLLGETNVVAEPNADFLKKIIVDYVYNFIRKNFRQPEKITCVPHNRLLRVGMTYEI 781

High-affinity potassium transporter.
Oryza sativa subsp. japonica (taxid: 39947)

>sp\|Q9M7K4\|POT5_ARATH Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	Back alignment and function description

>sp\|Q6H4M2\|HAK19_ORYSJ Potassium transporter 19 OS=Oryza sativa subsp. japonica GN=HAK19 PE=2 SV=1	Back alignment and function description

>sp\|Q6H4L9\|HAK20_ORYSJ Potassium transporter 20 OS=Oryza sativa subsp. japonica GN=HAK20 PE=2 SV=1	Back alignment and function description

>sp\|Q6VVA6\|HAK1_ORYSJ Potassium transporter 1 OS=Oryza sativa subsp. japonica GN=HAK1 PE=1 SV=2	Back alignment and function description

>sp\|Q84MS4\|HAK27_ORYSJ Potassium transporter 27 OS=Oryza sativa subsp. japonica GN=HAK27 PE=2 SV=1	Back alignment and function description

>sp\|Q84MS3\|HAK16_ORYSJ Probable potassium transporter 16 OS=Oryza sativa subsp. japonica GN=HAK16 PE=2 SV=1	Back alignment and function description

>sp\|Q6H4R6\|HAK23_ORYSJ Potassium transporter 23 OS=Oryza sativa subsp. japonica GN=HAK23 PE=2 SV=1	Back alignment and function description

>sp\|Q75G84\|HAK21_ORYSJ Potassium transporter 21 OS=Oryza sativa subsp. japonica GN=HAK21 PE=2 SV=1	Back alignment and function description

>sp\|O80739\|POT12_ARATH Putative potassium transporter 12 OS=Arabidopsis thaliana GN=POT12 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		756
255575894		780	Potassium transporter, putative [Ricinus	0.994	0.964	0.705	0.0
224128530		774	predicted protein [Populus trichocarpa]	0.972	0.949	0.723	0.0
296086596		751	unnamed protein product [Vitis vinifera]	0.956	0.962	0.718	0.0
225436717		773	PREDICTED: potassium transporter 5 [Viti	0.985	0.963	0.693	0.0
357511213		773	Potassium transporter [Medicago truncatu	0.960	0.939	0.705	0.0
225436723		770	PREDICTED: potassium transporter 5-like	0.977	0.959	0.692	0.0
225436721		773	PREDICTED: potassium transporter 5 [Viti	0.961	0.940	0.701	0.0
296086594		728	unnamed protein product [Vitis vinifera]	0.948	0.984	0.700	0.0
225436719		773	PREDICTED: potassium transporter 5 [Viti	0.972	0.950	0.683	0.0
296086595		734	unnamed protein product [Vitis vinifera]	0.949	0.978	0.699	0.0

>gi\|255575894\|ref\|XP_002528844.1\| Potassium transporter, putative [Ricinus communis] gi\|223531695\|gb\|EEF33518.1\| Potassium transporter, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1123 bits (2905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/774 (70%), Positives = 642/774 (82%), Gaps = 22/774 (2%)

Query: 2   SGSGGVESGERQVALSQDNLKGNKLLPQRYDSLDLESGAVSGYHRRSSK-AMKWSVILQL 60
           S + G    E   +L+   L  +KL  +R DSL++ES    G+    SK  + WSVILQL
Sbjct: 10  SSTSGETRDEFSKSLNGKKLSRHKL--RRSDSLEIESRTFHGHRVYGSKDGVSWSVILQL 67

Query: 61  AFQSIGIVYGDIGTSPLYVFSSTFPNGINHADDVLGVLSLILYTLTLIPLIKYVFIVLHA 120
           AFQSIGIVYGDIGTSPLYV++STF  GI H DDVLGVLSLI YTLTLIPLIKYV IVL A
Sbjct: 68  AFQSIGIVYGDIGTSPLYVYASTFTEGIKHNDDVLGVLSLIFYTLTLIPLIKYVLIVLRA 127

Query: 121 NDNGDGGTFALYSLICRYANVGLVPSQQAEDSNVSNFQLELPGNKRSRMASSLKSKLENS 180
           NDNGDGGTFALYSL+CRYA VGL+PSQQ+ED +VSNFQLELP  + SR AS LKSKLENS
Sbjct: 128 NDNGDGGTFALYSLVCRYAKVGLIPSQQSEDLDVSNFQLELPSRRLSR-ASKLKSKLENS 186

Query: 181 RVAKFFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCL 240
           + AKFFL FAT+LGTSM+IGDGVLTPCISVLSAVGGIK+AT+ MT+D +VWIS  IL+ L
Sbjct: 187 KFAKFFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKQATTKMTDDMIVWISVVILILL 246

Query: 241 FLFQRLGTDKVGYTFAPILLVWFAFIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQA 300
           F+ QR GTDKVGY+FAPI+ VWFA IAGIG++N   YDP VIKA+NP+YIVDYFR N+  
Sbjct: 247 FMVQRFGTDKVGYSFAPIICVWFAMIAGIGLFNFFKYDPAVIKAINPKYIVDYFRRNKDQ 306

Query: 301 AWISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGQASFLRKHPDLV 360
           AWISLGGI+L  TG EALFADVGHFTV SI+IS C V YPALI AYTGQA+FLRKH DLV
Sbjct: 307 AWISLGGIVLAITGTEALFADVGHFTVPSIQISMCTVTYPALICAYTGQAAFLRKHNDLV 366

Query: 361 SNTFFKSVPGPVYWPMFVVAVLAAIIASQALISGTFSIIQQSLALGCFPHVKIVHTSSEY 420
             TF++S+P P+YWPMF VAV+A+IIASQA+ISGTFSIIQQSL+LGCFP VKIVHTS++Y
Sbjct: 367 LETFYESIPKPLYWPMFGVAVMASIIASQAMISGTFSIIQQSLSLGCFPRVKIVHTSAKY 426

Query: 421 EGQVYVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSN 480
           EGQVY+PE+NYLLMLAC+GVT+GFR+T  IGNAYGIAVVFVMTLTS++LVLIM+MIWK+N
Sbjct: 427 EGQVYIPEINYLLMLACVGVTLGFRSTTNIGNAYGIAVVFVMTLTSAFLVLIMLMIWKTN 486

Query: 481 ILYVISYVLIIGSVELIYLSSVLYKFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVE 540
           ILYVI+YVL IG VEL+YLSSVLYKFDQGGYLPL FAAVLMTIMYVWN+VYRR+Y+YE++
Sbjct: 487 ILYVIAYVLTIGVVELVYLSSVLYKFDQGGYLPLAFAAVLMTIMYVWNDVYRRRYYYELD 546

Query: 541 HKLSPRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSL 600
           +K+SP ++ ++AA TN  R+PGLA+FYSELVQGIPPIFKHYVENVPALHSVLVFVSIK L
Sbjct: 547 NKISPDKLKEVAAETNFSRLPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKWL 606

Query: 601 PISKVPADERFIFRRVEPKELNMYRCVGRYGYMDVRDQEEPFERILVENLKQFIRDDYKF 660
           PI KVP +ERF+FRRVEPKELN++RCV RYGY DVR+++EPFERIL+E LKQFI DD+  
Sbjct: 607 PIGKVPVEERFLFRRVEPKELNVFRCVARYGYADVRNEQEPFERILIEKLKQFIIDDFWL 666

Query: 661 S-------------PQSQESAHDSDED-TIHGVQKEALERD----IEAVDKAWEAGAVHL 702
           S              +  E  ++ DE+ +I+   +E L++D    IE +DKA  AG VHL
Sbjct: 667 SQAIVSRGVTDEKVQELDEGQNNEDENGSINQENEEKLQQDVDNQIEIIDKASRAGVVHL 726

Query: 703 IGENEVVAAEGAGIGKRLMINYAFNFLKKNLRGSETVFDIPHKRMVKVGMTYEL 756
           +GENEV+A  GA IGKR++I+YA+ FLK+NLR SE VFDIP KRM+KVGMTYEL
Sbjct: 727 VGENEVIAGRGANIGKRILIDYAYTFLKRNLRQSEKVFDIPQKRMLKVGMTYEL 780

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224128530\|ref\|XP_002320355.1\| predicted protein [Populus trichocarpa] gi\|222861128\|gb\|EEE98670.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|296086596\|emb\|CBI32231.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225436717\|ref\|XP_002264560.1\| PREDICTED: potassium transporter 5 [Vitis vinifera] gi\|93115179\|gb\|ABE98259.1\| KUP1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357511213\|ref\|XP_003625895.1\| Potassium transporter [Medicago truncatula] gi\|355500910\|gb\|AES82113.1\| Potassium transporter [Medicago truncatula]	Back alignment and taxonomy information

>gi\|225436723\|ref\|XP_002265365.1\| PREDICTED: potassium transporter 5-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225436721\|ref\|XP_002264655.1\| PREDICTED: potassium transporter 5 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|296086594\|emb\|CBI32229.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225436719\|ref\|XP_002264737.1\| PREDICTED: potassium transporter 5 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|296086595\|emb\|CBI32230.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		756
TAIR\|locus:2142110		785	HAK5 "high affinity K+ transpo	0.873	0.840	0.517	1.1e-205
TAIR\|locus:2195688		827	AT1G60160 [Arabidopsis thalian	0.871	0.796	0.456	3.3e-171
TAIR\|locus:2029589		796	KUP10 "K+ uptake permease 10"	0.890	0.845	0.436	3.5e-165
TAIR\|locus:2044717		793	KUP11 "K+ uptake permease 11"	0.857	0.817	0.433	1.1e-161
TAIR\|locus:2119812		823	KUP9 "AT4G19960" [Arabidopsis	0.855	0.786	0.431	1.8e-161
TAIR\|locus:2184722		858	KUP7 "K+ uptake permease 7" [A	0.866	0.763	0.424	2.2e-161
TAIR\|locus:2061838		794	KT2 "potassium transporter 2"	0.834	0.794	0.436	5.4e-158
TAIR\|locus:2134153		855	KUP5 "K+ uptake permease 5" [A	0.850	0.752	0.416	1.1e-157
TAIR\|locus:2045639		712	KT1 "potassium transporter 1"	0.921	0.978	0.405	1.8e-156
TAIR\|locus:2016139		782	KUP6 "K+ uptake permease 6" [A	0.865	0.836	0.413	8e-155

TAIR\|locus:2142110 HAK5 "high affinity K+ transporter 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1806 (640.8 bits), Expect = 1.1e-205, Sum P(2) = 1.1e-205
 Identities = 347/671 (51%), Positives = 463/671 (69%)

Query:     6 GVESGERQVALSQDNLKGNKLLPQRYDSLDLESGAV-SGYHRRSSKAMKWSVILQLAFQS 64
             G E    +  L++      KL   R DS  +E+G   +   RRS   M W   + LAFQS
Sbjct:    10 GDEVNNHENKLNEKKKSWGKLY--RPDSFIIEAGQTPTNTGRRS--LMSWRTTMSLAFQS 65

Query:    65 IGIVYGDIGTSPLYVFSSTFPNGINHADDVXXXXXXXXXXXXXXXXXKYVFIVLHANDNG 124
             +G+VYGDIGTSPLYV++STF +GIN  DDV                 KYVFIVL ANDNG
Sbjct:    66 LGVVYGDIGTSPLYVYASTFTDGINDKDDVVGVLSLIIYTITLVALLKYVFIVLQANDNG 125

Query:   125 DGGTFALYSLICRYANVGLVPSQQAEDSNVSNFQLELPGNKRSRMASSLKSKLENSRVAK 184
             +GGTFALYSLICRYA +GL+P+Q+ ED  +SN+ LELP   + R A  +K KLENS+ AK
Sbjct:   126 EGGTFALYSLICRYAKMGLIPNQEPEDVELSNYTLELP-TTQLRRAHMIKEKLENSKFAK 184

Query:   185 FFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQ 244
               LF  T++GTSM+IGDG+LTP ISVLSAV GIK    ++ ++ VV +S AIL+ LF FQ
Sbjct:   185 IILFLVTIMGTSMVIGDGILTPSISVLSAVSGIK----SLGQNTVVGVSVAILIVLFAFQ 240

Query:   245 RLGTDKVGYTFAPILLVWFAFIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAAWIS 304
             R GTDKVG++FAPI+LVWF F+ GIG++N+  +D TV+KALNP YI+ YFR   +  WIS
Sbjct:   241 RFGTDKVGFSFAPIILVWFTFLIGIGLFNLFKHDITVLKALNPLYIIYYFRRTGRQGWIS 300

Query:   305 LGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALILAYTGQASFLRKHPDLVSNTF 364
             LGG+ LC TG EA+FAD+GHF+V +++IS   V YPAL+  Y GQA++L KH   VSNTF
Sbjct:   301 LGGVFLCITGTEAMFADLGHFSVRAVQISFSCVAYPALVTIYCGQAAYLTKHTYNVSNTF 360

Query:   365 FKSVPGPVYWPMFXXXXXXXXXXXXXXXXGTFSIIQQSLALGCFPHVKIVHTSSEYEGQV 424
             + S+P P+YWP F                G FS+I QSL +GCFP VK+VHTS++YEGQV
Sbjct:   361 YDSIPDPLYWPTFVVAVAASIIASQAMISGAFSVISQSLRMGCFPRVKVVHTSAKYEGQV 420

Query:   425 YVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYV 484
             Y+PE+NYLLMLACI VT+ FRTT KIG+AYGIAVV VM +T+  + LIM++IWK+NI+++
Sbjct:   421 YIPEINYLLMLACIAVTLAFRTTEKIGHAYGIAVVTVMVITTLMVTLIMLVIWKTNIVWI 480

Query:   485 ISYVLIIGSVELIYLSSVLYKFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEHKLS 544
               ++++ GS+E++YLSSV+YKF  GGYLPL    VLM +M +W  V+  KY YE+  K+S
Sbjct:   481 AIFLVVFGSIEMLYLSSVMYKFTSGGYLPLTITVVLMAMMAIWQYVHVLKYRYELREKIS 540

Query:   545 PRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPISK 604
                   +A + ++ R+PG+ LFY+ELV GI P+F HY+ N+ ++HSV V +SIK+LP+++
Sbjct:   541 RENAIQMATSPDVNRVPGIGLFYTELVNGITPLFSHYISNLSSVHSVFVLISIKTLPVNR 600

Query:   605 VPADERFIFRRVEPKELNMYRCVGRYGYMDVRDQEEPFERILVENLKQFIRDDYKFSPQS 664
             V + ERF FR V PK+  M+RCV RYGY +  ++ + FER  V  LK+FI  ++  S   
Sbjct:   601 VTSSERFFFRYVGPKDSGMFRCVVRYGYKEDIEEPDEFERHFVYYLKEFIHHEHFMSGGG 660

Query:   665 QE-SAHDSDED 674
              E    D +E+
Sbjct:   661 GEVDETDKEEE 671

GO:0005886 "plasma membrane" evidence=ISM

GO:0006813 "potassium ion transport" evidence=ISS

GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;ISS;IMP

GO:0016020 "membrane" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0009674 "potassium:sodium symporter activity" evidence=IMP

TAIR\|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2184722 KUP7 "K+ uptake permease 7" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2134153 KUP5 "K+ uptake permease 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5JK32	HAK5_ORYSJ	No assigned EC number	0.5314	0.9920	0.9603	yes	no
Q1DFF8	KUP_MYXXD	No assigned EC number	0.3129	0.8055	0.9326	yes	no
Q6H4M2	HAK19_ORYSJ	No assigned EC number	0.5040	0.9550	0.9730	yes	no
Q9M7K4	POT5_ARATH	No assigned EC number	0.5189	0.9828	0.9464	yes	no
Q7NUG7	KUP1_CHRVO	No assigned EC number	0.3233	0.8293	0.9796	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		756
PLN00151		852	PLN00151, PLN00151, potassium transporter; Provisi	0.0
PLN00150		779	PLN00150, PLN00150, potassium ion transporter fami	0.0
TIGR00794		688	TIGR00794, kup, potassium uptake protein	0.0
pfam02705		534	pfam02705, K_trans, K+ potassium transporter	0.0
PLN00148		785	PLN00148, PLN00148, potassium transporter; Provisi	0.0
PLN00149		779	PLN00149, PLN00149, potassium transporter; Provisi	0.0
COG3158		627	COG3158, Kup, K+ transporter [Inorganic ion transp	1e-149
PRK10745		622	PRK10745, trkD, potassium transport protein Kup; P	1e-111

>gnl\|CDD\|215079 PLN00151, PLN00151, potassium transporter; Provisional	Back alignment and domain information

 Score =  808 bits (2089), Expect = 0.0
 Identities = 346/779 (44%), Positives = 502/779 (64%), Gaps = 53/779 (6%)

Query: 28  PQRYDSLDLESGAVSGYHRRSSKAMKWSVILQLAFQSIGIVYGDIGTSPLYVFSSTFPNG 87
           P R DS D+E+  + G HR  S+ +     L LAFQ++G+V+GD+GTSPLY FS  F   
Sbjct: 73  PPRVDSFDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKV 132

Query: 88  -INHADDVLGVLSLILYTLTLIPLIKYVFIVLHANDNGDGGTFALYSLICRYANVGLVPS 146
            I   +DVLG LSL+LYTL LIPL KYV +VL AND+G+GGTFALYSLICR+A V L+P+
Sbjct: 133 PIKSEEDVLGALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPN 192

Query: 147 QQAEDSNVSNFQLELPGNKRSRMASSLKSKLENSRVAKFFLFFATLLGTSMLIGDGVLTP 206
           Q   D  +S+F+L+LP  +  R +  +K +LE S + K  L    L GTSM+IGDGVLTP
Sbjct: 193 QLPSDERISSFRLKLPTPELER-SLKIKERLETSSLLKKLLLLLVLAGTSMVIGDGVLTP 251

Query: 207 CISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQRLGTDKVGYTFAPILLVWFAFI 266
            +SV+SAV G+K       +D VV IS A LV LF  QR GT KVG+ F P L +WF  +
Sbjct: 252 AMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSL 311

Query: 267 AGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAAWISLGGIILCTTGAEALFADVGHFT 326
            GIGIYN++ YD +V +A NP YI  +F+ N   AW +LGG +LC TG+EA+FAD+G+F+
Sbjct: 312 GGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFS 371

Query: 327 VLSIRISTCGVVYPALILAYTGQASFLRKHPDLVSNTFFKSVPGPVYWPMFVVAVLAAII 386
           V SI+++   +V P L+LAY GQA++L K+PD     FF SVP  ++WP+F++A LAA+I
Sbjct: 372 VRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALI 431

Query: 387 ASQALISGTFSIIQQSLALGCFPHVKIVHTSSEYEGQVYVPEVNYLLMLACIGVTMGFRT 446
           AS+A+ + TFS I+QS+ALGCFP +KI+HTS ++ GQ+Y+P +N+ L++ C+ V   FR+
Sbjct: 432 ASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRS 491

Query: 447 TVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSSVLYKF 506
              IGNAYGIA V VM +++  + L+M++IW++NI  V+ + ++  SVEL++ SSVL   
Sbjct: 492 ITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSV 551

Query: 507 DQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEHKLSPRRINDIAANTNICRIPGLALF 566
             GG++PL+FA+V + IMY+WN   + KY  EV  KLS   + ++ +N    R PG+ L 
Sbjct: 552 GDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLL 611

Query: 567 YSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPISKVPADERFIFRRVEPKELNMYRC 626
           Y+ELV+GIP IF H++  +PA+HS ++FV IK +P+  VP +ERF+FRRV PK+ +M+RC
Sbjct: 612 YNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRC 671

Query: 627 VGRYGYMDVRDQE-EPFERILVENLKQFIR------------------------------ 655
           + RYGY DVR +  + FE++L+E+L++FIR                              
Sbjct: 672 IARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIA 731

Query: 656 -------------DDYKFSPQSQESAHDSDEDTIHGV-------QKEALERDIEAVDKAW 695
                         DY+ + +    A  S+E +           + ++LE ++  + +A 
Sbjct: 732 PNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSLEYELSFIREAK 791

Query: 696 EAGAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKKNLRGSETVFDIPHKRMVKVGMTY 754
           E+G V+L+G  +V A + +   K+L+INY + FL+KN R       +PH  +++VGMTY
Sbjct: 792 ESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTY 850

Length = 852

>gnl\|CDD\|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|217193 pfam02705, K_trans, K+ potassium transporter	Back alignment and domain information

>gnl\|CDD\|215077 PLN00148, PLN00148, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|177753 PLN00149, PLN00149, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|182693 PRK10745, trkD, potassium transport protein Kup; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		756
PLN00151		852	potassium transporter; Provisional	100.0
PLN00150		779	potassium ion transporter family protein; Provisio	100.0
PLN00148		785	potassium transporter; Provisional	100.0
PLN00149		779	potassium transporter; Provisional	100.0
TIGR00794		688	kup potassium uptake protein. Proteins of the KUP	100.0
PRK10745		622	trkD potassium transport protein Kup; Provisional	100.0
COG3158		627	Kup K+ transporter [Inorganic ion transport and me	100.0
PF02705		534	K_trans: K+ potassium transporter; InterPro: IPR00	100.0
TIGR00911		501	2A0308 L-type amino acid transporter.	93.54
COG0531		466	PotE Amino acid transporters [Amino acid transport	91.04
TIGR00909		429	2A0306 amino acid transporter.	86.47
PF13520		426	AA_permease_2: Amino acid permease; PDB: 3NCY_A 3G	83.26
TIGR03813		474	put_Glu_GABA_T putative glutamate/gamma-aminobutyr	83.19
TIGR00907		482	2A0304 amino acid permease (GABA permease).	82.51
PRK10435		435	cadB lysine/cadaverine antiporter; Provisional	81.2
PRK10655		438	potE putrescine transporter; Provisional	80.21

>PLN00151 potassium transporter; Provisional	Back alignment and domain information

Probab=100.00  E-value=2.2e-254  Score=2141.08  Aligned_cols=730  Identities=47%  Similarity=0.867  Sum_probs=693.2

Q ss_pred             CCCCCCCCcccccCCcCCccccccccchHHHHHHHHHhhcceeecccccchhHHhhhcCCC-CCCCccceehhhHHHHHH
Q 004397           26 LLPQRYDSLDLESGAVSGYHRRSSKAMKWSVILQLAFQSIGIVYGDIGTSPLYVFSSTFPN-GINHADDVLGVLSLILYT  104 (756)
Q Consensus        26 ~~~~~~ds~~~~a~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~-~~~~~~dvlGvLSLIfWt  104 (756)
                      ..++|+||||.|++++++.++|+.|+.++|+++.|||||+|||||||||||||||+++|++ +++++|||+|+|||||||
T Consensus        71 ~~~~~~d~~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIlGvLSLIfWt  150 (852)
T PLN00151         71 RTPPRVDSFDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVLGALSLVLYT  150 (852)
T ss_pred             hCCCccchhhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhheeeehHHHHHH
Confidence            3469999999999999888877655577888899999999999999999999999999976 456999999999999999


Q ss_pred             HHHHhhhheeeEEEeecCCCCChHHHHHHHHhhhcccCCCCCCCccccccccccccCCCccccccchhhHhhhhhhhhhH
Q 004397          105 LTLIPLIKYVFIVLHANDNGDGGTFALYSLICRYANVGLVPSQQAEDSNVSNFQLELPGNKRSRMASSLKSKLENSRVAK  184 (756)
Q Consensus       105 L~liv~iKYv~ivL~Adn~GEGG~fALysLi~r~~~~~~ipn~~~~d~~~s~~~~~~~~~~~~~~~~~~k~~le~~~~~~  184 (756)
                      |||||++|||+|||||||||||||||||||+|||+|++++||||++|+++|+|+++.| +++.+|+.|+|++||+|+++|
T Consensus       151 LtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~-~~~~~~~~~~k~~lE~s~~~k  229 (852)
T PLN00151        151 LILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLP-TPELERSLKIKERLETSSLLK  229 (852)
T ss_pred             HHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCC-ccccchhHHHHHHhhhhHHHH
Confidence            9999999999999999999999999999999999999999999999999999999988 567888999999999999999


Q ss_pred             HHHHHHHHhhhhhhhcCcccccchhhhhhhcccccccCCCCCCeeehhHHHHHHHHHHHhhhcccccccchhhHHHHHHH
Q 004397          185 FFLFFATLLGTSMLIGDGVLTPCISVLSAVGGIKEATSAMTEDRVVWISAAILVCLFLFQRLGTDKVGYTFAPILLVWFA  264 (756)
Q Consensus       185 ~~l~~l~llG~am~~GDGviTPAISVLSAVeGL~v~~p~l~~~~Vv~Is~~ILv~LF~iQr~GT~kVg~~FgPIm~vWF~  264 (756)
                      .++++++++||||+||||+|||||||||||||||++.|++++++||||||+||++||++|||||+|||++|||||++||+
T Consensus       230 ~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl  309 (852)
T PLN00151        230 KLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFC  309 (852)
T ss_pred             HHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhHhHhhcccCcceeeecChHHHHHHHhhcchhHHHHhhhhhhhhcccccccccCCCCcccceeeeehhhHHHHHHH
Q 004397          265 FIAGIGIYNIIHYDPTVIKALNPRYIVDYFRNNQQAAWISLGGIILCTTGAEALFADVGHFTVLSIRISTCGVVYPALIL  344 (756)
Q Consensus       265 ~l~~iGiynI~~~~p~Vl~AlnP~ya~~ff~~~g~~~~~~LG~VvLciTGaEALyADlGHFg~~~Iq~aw~~~V~PaLlL  344 (756)
                      +||++|+|||++|||+||+||||+|+++||+|||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|
T Consensus       310 ~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL  389 (852)
T PLN00151        310 SLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLL  389 (852)
T ss_pred             HHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccchhhhccCCCcccCcccccccCCchHHHHHHHHHHHHHHhhHhhhhhhHHHHHHHHcCCCCceeEEecCCCcCCce
Q 004397          345 AYTGQASFLRKHPDLVSNTFFKSVPGPVYWPMFVVAVLAAIIASQALISGTFSIIQQSLALGCFPHVKIVHTSSEYEGQV  424 (756)
Q Consensus       345 ~Y~GQgA~Ll~~p~~~~npFy~siP~~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~kI~hTS~~~~GQI  424 (756)
                      ||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++|||
T Consensus       390 ~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQI  469 (852)
T PLN00151        390 AYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQI  469 (852)
T ss_pred             HHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eechhHHHHHHHhheeEEeecCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHhhh
Q 004397          425 YVPEVNYLLMLACIGVTMGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSSVLY  504 (756)
Q Consensus       425 YIP~VNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~~v~~~vW~~~~~~~~~f~~~F~~ie~~ffsa~l~  504 (756)
                      |||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.
T Consensus       470 YIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~  549 (852)
T PLN00151        470 YIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLS  549 (852)
T ss_pred             eeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCcHHHHHHHHHHhhhhHhHHHHHHHHHHHHhcCCChHHHHHHhhcCCCcccceeEEEEecCCCCchhhHHHhhhh
Q 004397          505 KFDQGGYLPLIFAAVLMTIMYVWNNVYRRKYFYEVEHKLSPRRINDIAANTNICRIPGLALFYSELVQGIPPIFKHYVEN  584 (756)
Q Consensus       505 K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~~~~~~~~~RvpG~avf~t~~~~gvP~~f~h~l~~  584 (756)
                      ||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++++|+|++|.||++|
T Consensus       550 Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~  629 (852)
T PLN00151        550 SVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTT  629 (852)
T ss_pred             hhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             ccccceeEEEEEEeeecccccCCCceEEEEEecCCCCCEEEEEEEeecccCCC-CchhHHHHHHHHHHHHHhhccCCC--
Q 004397          585 VPALHSVLVFVSIKSLPISKVPADERFIFRRVEPKELNMYRCVGRYGYMDVRD-QEEPFERILVENLKQFIRDDYKFS--  661 (756)
Q Consensus       585 ~~~lH~~vvfv~ik~~pvP~V~~~eR~~v~~~~~~~~~~~r~v~ryGy~d~~~-~~~~f~~~l~~~l~~fi~~e~~~~--  661 (756)
                      ||++||++||||||++|+|+||++|||+++|++||++++|||++||||||.++ ++++||+.++++|++|||.|+...  
T Consensus       630 ~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~  709 (852)
T PLN00151        630 LPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERAL  709 (852)
T ss_pred             CCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccc
Confidence            99999999999999999999999999999999999999999999999999986 789999999999999999876321  


Q ss_pred             -CCCcCcC-CC-----------------C-C--------cc--ccc------------------ccchhhHHHHHHHHHH
Q 004397          662 -PQSQESA-HD-----------------S-D--------ED--TIH------------------GVQKEALERDIEAVDK  693 (756)
Q Consensus       662 -~~~~~~~-~~-----------------~-~--------~~--~~~------------------~~~~~~~~~e~~~l~~  693 (756)
                       +..++++ ++                 + +        +.  +..                  ++.++++++|++++++
T Consensus       710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~l~~  789 (852)
T PLN00151        710 ESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSLEYELSFIRE  789 (852)
T ss_pred             cccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHH
Confidence             1000000 00                 0 0        00  000                  1123468999999999


Q ss_pred             HHHcCceEEeecceEEeccCCCccHHHHHHHHHHHHHHhccCccccccCCCCCEEEEEEEEEC
Q 004397          694 AWEAGAVHLIGENEVVAAEGAGIGKRLMINYAFNFLKKNLRGSETVFDIPHKRMVKVGMTYEL  756 (756)
Q Consensus       694 a~~~~~~y~lg~~~v~a~~~s~~~kk~~~~~~f~fL~rN~r~~~~~~~IP~~rlvevG~~~~i  756 (756)
                      |+|+|++|++||+++++|++|+++||+++|++|+|||||||++...++|||+|++||||+|+|
T Consensus       790 a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v  852 (852)
T PLN00151        790 AKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV  852 (852)
T ss_pred             HHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence            999999999999999999999999999999999999999999999999999999999999996

>PLN00150 potassium ion transporter family protein; Provisional	Back alignment and domain information

>PLN00148 potassium transporter; Provisional	Back alignment and domain information

>PLN00149 potassium transporter; Provisional	Back alignment and domain information

>TIGR00794 kup potassium uptake protein	Back alignment and domain information

>PRK10745 trkD potassium transport protein Kup; Provisional	Back alignment and domain information

>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members	Back alignment and domain information

>TIGR00911 2A0308 L-type amino acid transporter	Back alignment and domain information

>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR00909 2A0306 amino acid transporter	Back alignment and domain information

>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A	Back alignment and domain information

>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter	Back alignment and domain information

>TIGR00907 2A0304 amino acid permease (GABA permease)	Back alignment and domain information

>PRK10435 cadB lysine/cadaverine antiporter; Provisional	Back alignment and domain information

>PRK10655 potE putrescine transporter; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		756
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 64.9 bits (157), Expect = 7e-11
 Identities = 102/740 (13%), Positives = 197/740 (26%), Gaps = 249/740 (33%)

Query: 34  LDLESGAVSGYHRRSSKAMKWSVILQLAFQSI--GIVYGDIGTSPLYVFSSTFPNGINHA 91
           +D E+G    Y  +         IL +   +        D+   P  + S          
Sbjct: 7   MDFETGEHQ-YQYKD--------ILSVFEDAFVDNFDCKDVQDMPKSILSKE------EI 51

Query: 92  DDVLGVLSLILYTLTLIPLIK-------YVFIVLHANDNGDGGTFALYS-LICRYANVGL 143
           D ++     +  TL L   +          F+      N        Y  L+        
Sbjct: 52  DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN--------YKFLMSPIKTEQR 103

Query: 144 VPSQQAE------DSNVSNFQLELPGN-KRSRMASSLKSKLENSRVAKFFLFFATLLGTS 196
            PS          D   ++ Q+    N  R +    L+  L   R AK       + G  
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV----LIDG-- 157

Query: 197 MLIGDG--VLTPCISVLSAVGGIKEATSAMTEDRVVWISAA----------ILVCLFL-- 242
           +L G G   +   + V  +     +    M + ++ W++            +L  L    
Sbjct: 158 VL-GSGKTWVA--LDVCLS----YKVQCKM-DFKIFWLNLKNCNSPETVLEMLQKLLYQI 209

Query: 243 ------------------------FQRLGTDKVGYTFAPILL--VWFAFIAGIGIYNIIH 276
                                    +RL   K  Y    ++L  V               
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP-YENCLLVLLNVQ-------------- 254

Query: 277 YDPTVIKALNP--------RY--IVDYFRNNQQAAWISLGGIILCTTGAEA--LFADVGH 324
            +     A N         R+  + D F +      ISL    +  T  E   L      
Sbjct: 255 -NAKAWNAFNLSCKILLTTRFKQVTD-FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 325 FTVLSIRISTCGVVYP---ALILAYTGQASFLRKHPDLVSNTFFKSVPGPVYWPMFVVAV 381
                +         P   ++I      A  +R                   W       
Sbjct: 313 CRPQDLPREVLT-TNPRRLSII------AESIRDGLATWD-----------NWKHVNCDK 354

Query: 382 LAAIIASQALISGTFSIIQQSLALGCFPHVKIVHTSSEYEGQVYVPEVNYLLMLACIGVT 441
           L              +II+ SL          V   +EY              L+ +   
Sbjct: 355 LT-------------TIIESSLN---------VLEPAEYR--------KMFDRLS-V--- 380

Query: 442 MGFRTTVKIGNAYGIAVVFVMTLTSSYLVLIMIMIWKSNILYVISYVLIIGSVELIYLSS 501
             F  +  I               +  L     +IW   I   +  V+     +L   S 
Sbjct: 381 --FPPSAHI--------------PTILLS----LIWFDVIKSDVMVVV----NKLHKYSL 416

Query: 502 VLYKFDQGGY-LPLIFAAVLMTIMYVWN------NVYRRKYFYEVEHKLSPRRINDIAAN 554
           V  +  +    +P I+  + + +   +       + Y     ++ +  + P         
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ----- 471

Query: 555 TNICRIPGLALFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPISKVPADERFIFR 614
                      FYS +         H+++N+     + +F          V  D RF+ +
Sbjct: 472 ----------YFYSHIG--------HHLKNIEHPERMTLF--------RMVFLDFRFLEQ 505

Query: 615 RVEPKELNMYRCVGRYGYMDVRDQEEPFERILVEN---LKQFIRDDYKFSPQSQESAHDS 671
           ++                ++   Q + ++  + +N    ++ +     F P+ +E+   S
Sbjct: 506 KIRHDSTA---WNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICS 562

Query: 672 DEDTIHGVQKEALERDIEAV 691
               +  ++  AL  + EA+
Sbjct: 563 KYTDL--LRI-ALMAEDEAI 579

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		756
4djk_A		511	Probable glutamate/gamma-aminobutyrate antiporter;	96.79
3gia_A		444	Uncharacterized protein MJ0609; membrane protein,	96.72
3l1l_A		445	Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC	96.28

>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A	Back alignment and structure

Probab=96.79  E-value=0.029  Score=61.06  Aligned_cols=100  Identities=18%  Similarity=0.140  Sum_probs=55.1

Q ss_pred             eehhHHHHHHHHHHHhhhcccccccchhhH----HHHHHHHHHHhHhHhhcccCccee----eecChHHHHHHHhhcchh
Q 004397          229 VVWISAAILVCLFLFQRLGTDKVGYTFAPI----LLVWFAFIAGIGIYNIIHYDPTVI----KALNPRYIVDYFRNNQQA  300 (756)
Q Consensus       229 Vv~Is~~ILv~LF~iQr~GT~kVg~~FgPI----m~vWF~~l~~iGiynI~~~~p~Vl----~AlnP~ya~~ff~~~g~~  300 (756)
                      ...+++++++++..+.-+|....+++..-.    +++-++.+.++|++.+...+|.-+    ..+.|.+       .+..
T Consensus       130 ~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  202 (511)
T 4djk_A          130 KTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDF-------SKVG  202 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCT-------TSTT
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCc-------ccch
Confidence            556788888888999999998777654322    122344455667766554333211    1222211       1224


Q ss_pred             HHHHhhhhhhhhcccccccccCCCC--cccceeeeeh
Q 004397          301 AWISLGGIILCTTGAEALFADVGHF--TVLSIRISTC  335 (756)
Q Consensus       301 ~~~~LG~VvLciTGaEALyADlGHF--g~~~Iq~aw~  335 (756)
                      .|..+..++.+.+|-|+.-.=-+-.  .+|.+..|-.
T Consensus       203 ~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai~  239 (511)
T 4djk_A          203 TLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAML  239 (511)
T ss_dssp             TTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHHH
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHHHH
Confidence            5666788899999999864333333  2455554433

PyMOL of 4djk

>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C	Back alignment and structure

>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00