Citrus Sinensis ID: 004451
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 753 | 2.2.26 [Sep-21-2011] | |||||||
| Q8L831 | 772 | Nudix hydrolase 3 OS=Arab | yes | no | 0.994 | 0.970 | 0.739 | 0.0 | |
| Q97LV8 | 206 | Uncharacterized Nudix hyd | yes | no | 0.200 | 0.733 | 0.333 | 1e-13 | |
| Q8Y9Z9 | 169 | Uncharacterized Nudix hyd | yes | no | 0.179 | 0.798 | 0.320 | 1e-12 | |
| Q92ES1 | 169 | Uncharacterized Nudix hyd | yes | no | 0.164 | 0.733 | 0.328 | 2e-11 | |
| Q6D3F5 | 179 | Isopentenyl-diphosphate D | yes | no | 0.148 | 0.625 | 0.319 | 2e-08 | |
| A8GDW2 | 179 | Isopentenyl-diphosphate D | yes | no | 0.130 | 0.547 | 0.378 | 9e-08 | |
| O42641 | 251 | Isopentenyl-diphosphate D | N/A | no | 0.188 | 0.565 | 0.291 | 3e-07 | |
| Q9HUW9 | 169 | Uncharacterized Nudix hyd | yes | no | 0.144 | 0.644 | 0.314 | 1e-06 | |
| Q7X5H2 | 182 | Isopentenyl-diphosphate D | N/A | no | 0.119 | 0.494 | 0.322 | 2e-06 | |
| Q42553 | 284 | Isopentenyl-diphosphate D | no | no | 0.166 | 0.440 | 0.312 | 3e-06 |
| >sp|Q8L831|NUDT3_ARATH Nudix hydrolase 3 OS=Arabidopsis thaliana GN=NUDT3 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1174 bits (3038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/751 (73%), Positives = 648/751 (86%), Gaps = 2/751 (0%)
Query: 2 SEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQ 61
EVHR GDYHR V+ WIF E+TQ+LLLQ R+D KDSWPG WDISSAGHISAGD+SL+SAQ
Sbjct: 23 GEVHRDGDYHRAVHVWIFVETTQQLLLQLRSDDKDSWPGQWDISSAGHISAGDTSLLSAQ 82
Query: 62 RELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQT 121
REL+EELG+ LPKDAFE +F FLQ+ V NDGKFINNEF DVYLVT L+PIPLEAFTLQ+
Sbjct: 83 RELEEELGVKLPKDAFEKIFVFLQECVTNDGKFINNEFNDVYLVTILHPIPLEAFTLQKE 142
Query: 122 EVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQLR 181
EVSAVKY+ YEEY+N L+K+DP++VPYDVNG YG+LF+II QR + NT RSL+LQKQL+
Sbjct: 143 EVSAVKYVPYEEYRNFLSKEDPAYVPYDVNGEYGKLFDIIRQRCQVNTEARSLSLQKQLQ 202
Query: 182 RYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASEL 241
RY+ V+L A+L LS+AD++AL L++KAA +MD+IFY QVW SNP LRDWLK+HA+AS+L
Sbjct: 203 RYSPVTLEAKLTELSEADQKALGLIVKAAKIMDDIFYEQVWNSNPALRDWLKDHANASKL 262
Query: 242 DKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPP 301
DKLKW Y+ INKSPWSSLDENEAFL+TADSAVKLLP ATK + GWKGLEY+A+FP+ KPP
Sbjct: 263 DKLKWDYFTINKSPWSSLDENEAFLSTADSAVKLLPGATKAIAGWKGLEYRAAFPVTKPP 322
Query: 302 GANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSV 361
GANFYPPDMDKMEF LW + LTE+Q+ AT FF+VIKRRSE NLD+S H+ +T
Sbjct: 323 GANFYPPDMDKMEFTLWLNGLTEEQKHAATGFFSVIKRRSEANLDAS--DHLASSTKKLP 380
Query: 362 GSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIA 421
S DLYS+PYSE Y +L +ASE L KAGD+ SSPSLK+LLHSKA+AFLSN YY+SDIA
Sbjct: 381 DSNSDLYSIPYSEIYRPFLKKASEFLQKAGDLVSSPSLKKLLHSKAEAFLSNEYYESDIA 440
Query: 422 WIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPM 481
W++LDS+LD+TIGPYETYED IFGYKATFE FIGIRDDKATA +KLFGDNL++LE NLP+
Sbjct: 441 WMDLDSKLDITIGPYETYEDEIFGYKATFETFIGIRDDKATADLKLFGDNLKLLEDNLPL 500
Query: 482 DNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAK 541
++ YKS DV AAPIRVIQLIYNSGDVKGPQTVA+NLPNDE+IVKDRGTSMVMLKNV EAK
Sbjct: 501 ESVYKSTDVSAAPIRVIQLIYNSGDVKGPQTVAYNLPNDEKIVKDRGTSMVMLKNVQEAK 560
Query: 542 FKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQE 601
F++IL+PIA++ I KEQ+ LVDFDSFFTH ICHECCHGIGPH+ITLP G+ STVR ELQE
Sbjct: 561 FEHILKPIAEITISKEQRGLVDFDSFFTHTICHECCHGIGPHTITLPGGQTSTVRKELQE 620
Query: 602 LHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQA 661
+HSAMEEAKADIVGLWALKFLI + LL KS+V+SMYVSFLAGCFRS+RFGL E+HGKGQA
Sbjct: 621 VHSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYVSFLAGCFRSIRFGLTEAHGKGQA 680
Query: 662 LQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTM 721
LQFN+L+EK AF+ H D TFSVDF K+EGAVESLS EILTIQ +GDK AA+LLL KYCT+
Sbjct: 681 LQFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEILTIQGKGDKNAATLLLNKYCTI 740
Query: 722 TQPLKVALQKLENVQVPVDIAPTFTAVNKLL 752
T PLK AL+ LE V+VPVDI+PTF L+
Sbjct: 741 TGPLKTALENLERVKVPVDISPTFPLAEALM 771
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Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: - |
| >sp|Q97LV8|Y446_CLOAB Uncharacterized Nudix hydrolase CA_C0446 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=CA_C0446 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q8Y9Z9|Y368_LISMO Uncharacterized Nudix hydrolase lmo0368 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmo0368 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q92ES1|Y387_LISIN Uncharacterized Nudix hydrolase lin0387 OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lin0387 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6D3F5|IDI_ERWCT Isopentenyl-diphosphate Delta-isomerase OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=idi PE=3 SV=1 | Back alignment and function description |
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| >sp|A8GDW2|IDI_SERP5 Isopentenyl-diphosphate Delta-isomerase OS=Serratia proteamaculans (strain 568) GN=idi PE=3 SV=1 | Back alignment and function description |
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| >sp|O42641|IDI1_PHARH Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9HUW9|Y4841_PSEAE Uncharacterized Nudix hydrolase PA4841 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA4841 PE=3 SV=2 | Back alignment and function description |
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| >sp|Q7X5H2|IDI_CITFR Isopentenyl-diphosphate Delta-isomerase OS=Citrobacter freundii GN=idi PE=3 SV=1 | Back alignment and function description |
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| >sp|Q42553|IDI2_ARATH Isopentenyl-diphosphate Delta-isomerase II, chloroplastic OS=Arabidopsis thaliana GN=IPP2 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 753 | ||||||
| 224108599 | 752 | predicted protein [Populus trichocarpa] | 0.993 | 0.994 | 0.811 | 0.0 | |
| 225443237 | 782 | PREDICTED: nudix hydrolase 3-like [Vitis | 0.997 | 0.960 | 0.794 | 0.0 | |
| 298204759 | 765 | unnamed protein product [Vitis vinifera] | 0.970 | 0.955 | 0.781 | 0.0 | |
| 356549922 | 768 | PREDICTED: nudix hydrolase 3-like [Glyci | 0.988 | 0.968 | 0.767 | 0.0 | |
| 449436201 | 786 | PREDICTED: nudix hydrolase 3-like [Cucum | 0.996 | 0.954 | 0.761 | 0.0 | |
| 18412472 | 772 | nudix hydrolase 3 [Arabidopsis thaliana] | 0.994 | 0.970 | 0.739 | 0.0 | |
| 297839837 | 792 | hypothetical protein ARALYDRAFT_477144 [ | 0.996 | 0.946 | 0.740 | 0.0 | |
| 449436199 | 783 | PREDICTED: nudix hydrolase 3-like [Cucum | 0.994 | 0.956 | 0.735 | 0.0 | |
| 449436639 | 768 | PREDICTED: nudix hydrolase 3-like [Cucum | 0.993 | 0.973 | 0.716 | 0.0 | |
| 326495548 | 776 | predicted protein [Hordeum vulgare subsp | 0.992 | 0.962 | 0.708 | 0.0 |
| >gi|224108599|ref|XP_002333368.1| predicted protein [Populus trichocarpa] gi|222836350|gb|EEE74757.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1284 bits (3322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/749 (81%), Positives = 684/749 (91%), Gaps = 1/749 (0%)
Query: 3 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 62
EVHR GDYHR V+ WI++ESTQELLLQRRAD KDSWPG WDISSAGHISAGDSSL+SAQR
Sbjct: 5 EVHRDGDYHRAVHVWIYSESTQELLLQRRADCKDSWPGQWDISSAGHISAGDSSLVSAQR 64
Query: 63 ELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 122
ELQEELGI+LPKDAFE +F +LQ+ VINDGKFINNEF DVYLVTT++PIPLEAFTLQ+TE
Sbjct: 65 ELQEELGISLPKDAFELIFIYLQECVINDGKFINNEFNDVYLVTTVDPIPLEAFTLQETE 124
Query: 123 VSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQLRR 182
VSAVKYI++EEY++LL K+DP +VPYDV+ YGQLF II +RY ENT+ RSL+LQKQL R
Sbjct: 125 VSAVKYISFEEYRSLLVKEDPDYVPYDVDEQYGQLFEIIRKRYTENTVARSLSLQKQLCR 184
Query: 183 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELD 242
YA VSL+AEL GLS+ D++ L L+IKAA +MDEIFYLQVWYSNP LRDWLKEHA ASELD
Sbjct: 185 YASVSLDAELTGLSNTDRKTLGLLIKAAKLMDEIFYLQVWYSNPALRDWLKEHASASELD 244
Query: 243 KLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPG 302
KLKWMYY INKSPWS LDENEAFLTT DSA+KLLP+ATKPV+GWKGLEYKA+FP+ KPPG
Sbjct: 245 KLKWMYYSINKSPWSCLDENEAFLTTTDSAIKLLPEATKPVSGWKGLEYKAAFPMLKPPG 304
Query: 303 ANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVG 362
ANFYPPDMDK EF+LW SLTEK+Q DA FFTVIKR SEF+LDSS H V TNH +
Sbjct: 305 ANFYPPDMDKKEFKLWNDSLTEKEQNDAMGFFTVIKRHSEFSLDSSSPNHAVHGTNH-LM 363
Query: 363 SIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAW 422
+ +DLYSVPYS+EYNS+L +A+ELLH+AGD+A SPSLKRLLHSKADAFLSN+YY+SDIAW
Sbjct: 364 TAHDLYSVPYSKEYNSFLRKAAELLHEAGDLAGSPSLKRLLHSKADAFLSNDYYESDIAW 423
Query: 423 IELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMD 482
+ELDS+LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQ+KLFGDNLQ LEQNLPMD
Sbjct: 424 MELDSKLDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQLKLFGDNLQFLEQNLPMD 483
Query: 483 NAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKF 542
+AYKSK+V AAPIRVI+L+YN+GDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKF
Sbjct: 484 SAYKSKNVNAAPIRVIRLLYNAGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKF 543
Query: 543 KNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQEL 602
K+IL+PIADVCI KEQ+ LVDF+SFFTH ICHECCHGIGPH+ITLPDG++STVR ELQEL
Sbjct: 544 KHILQPIADVCISKEQKGLVDFESFFTHTICHECCHGIGPHTITLPDGQKSTVRKELQEL 603
Query: 603 HSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQAL 662
HSA+EEAKADIVGLWALKFLI +DLLP+S+VKSMYVSFLAGCFRSVRFGLEE+HGKGQAL
Sbjct: 604 HSALEEAKADIVGLWALKFLINQDLLPRSMVKSMYVSFLAGCFRSVRFGLEEAHGKGQAL 663
Query: 663 QFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMT 722
QFNW++EKEAFILH D+TFSVDF KVE AVESLS EILTIQA+GDKEAA LLLQKYC MT
Sbjct: 664 QFNWMYEKEAFILHPDETFSVDFAKVEEAVESLSREILTIQAKGDKEAADLLLQKYCKMT 723
Query: 723 QPLKVALQKLENVQVPVDIAPTFTAVNKL 751
+PLK AL+KLE+VQVPVDI P F+ VN++
Sbjct: 724 RPLKHALEKLESVQVPVDIYPIFSTVNEI 752
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225443237|ref|XP_002271902.1| PREDICTED: nudix hydrolase 3-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|298204759|emb|CBI25257.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356549922|ref|XP_003543339.1| PREDICTED: nudix hydrolase 3-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449436201|ref|XP_004135882.1| PREDICTED: nudix hydrolase 3-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|18412472|ref|NP_565218.1| nudix hydrolase 3 [Arabidopsis thaliana] gi|68565909|sp|Q8L831.1|NUDT3_ARATH RecName: Full=Nudix hydrolase 3; Short=AtNUDT3 gi|21539559|gb|AAM53332.1| unknown protein [Arabidopsis thaliana] gi|23197868|gb|AAN15461.1| unknown protein [Arabidopsis thaliana] gi|332198166|gb|AEE36287.1| nudix hydrolase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297839837|ref|XP_002887800.1| hypothetical protein ARALYDRAFT_477144 [Arabidopsis lyrata subsp. lyrata] gi|297333641|gb|EFH64059.1| hypothetical protein ARALYDRAFT_477144 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|449436199|ref|XP_004135881.1| PREDICTED: nudix hydrolase 3-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449436639|ref|XP_004136100.1| PREDICTED: nudix hydrolase 3-like [Cucumis sativus] gi|449509177|ref|XP_004163517.1| PREDICTED: nudix hydrolase 3-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|326495548|dbj|BAJ85870.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 753 | ||||||
| TAIR|locus:2019848 | 772 | NUDT3 "nudix hydrolase homolog | 0.993 | 0.968 | 0.74 | 3.8e-307 | |
| UNIPROTKB|Q486U4 | 576 | CPS_1178 "Putative uncharacter | 0.494 | 0.645 | 0.373 | 1.2e-73 | |
| TIGR_CMR|CPS_1178 | 576 | CPS_1178 "lipoprotein, putativ | 0.494 | 0.645 | 0.373 | 1.2e-73 | |
| DICTYBASE|DDB_G0269784 | 201 | DDB_G0269784 "Uncharacterized | 0.228 | 0.855 | 0.366 | 5.9e-26 | |
| TIGR_CMR|BA_1964 | 202 | BA_1964 "mutT/nudix family pro | 0.185 | 0.693 | 0.302 | 1.8e-11 | |
| TIGR_CMR|CBU_0607 | 503 | CBU_0607 "diphosphomevalonate | 0.180 | 0.270 | 0.32 | 1e-07 | |
| ASPGD|ASPL0000061206 | 268 | AN0579 [Emericella nidulans (t | 0.185 | 0.522 | 0.300 | 1.4e-06 | |
| TIGR_CMR|SPO_0131 | 180 | SPO_0131 "isopentyl-diphosphat | 0.183 | 0.766 | 0.267 | 3.1e-06 | |
| POMBASE|SPBC106.15 | 229 | idi1 "isopentenyl-diphosphate | 0.185 | 0.611 | 0.300 | 4.9e-06 | |
| TAIR|locus:2171382 | 291 | IPP1 "isopentenyl diphosphate | 0.179 | 0.463 | 0.311 | 6.7e-06 |
| TAIR|locus:2019848 NUDT3 "nudix hydrolase homolog 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2947 (1042.5 bits), Expect = 3.8e-307, P = 3.8e-307
Identities = 555/750 (74%), Positives = 648/750 (86%)
Query: 3 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 62
EVHR GDYHR V+ WIF E+TQ+LLLQ R+D KDSWPG WDISSAGHISAGD+SL+SAQR
Sbjct: 24 EVHRDGDYHRAVHVWIFVETTQQLLLQLRSDDKDSWPGQWDISSAGHISAGDTSLLSAQR 83
Query: 63 ELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 122
EL+EELG+ LPKDAFE +F FLQ+ V NDGKFINNEF DVYLVT L+PIPLEAFTLQ+ E
Sbjct: 84 ELEEELGVKLPKDAFEKIFVFLQECVTNDGKFINNEFNDVYLVTILHPIPLEAFTLQKEE 143
Query: 123 VSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQLRR 182
VSAVKY+ YEEY+N L+K+DP++VPYDVNG YG+LF+II QR + NT RSL+LQKQL+R
Sbjct: 144 VSAVKYVPYEEYRNFLSKEDPAYVPYDVNGEYGKLFDIIRQRCQVNTEARSLSLQKQLQR 203
Query: 183 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELD 242
Y+ V+L A+L LS+AD++AL L++KAA +MD+IFY QVW SNP LRDWLK+HA+AS+LD
Sbjct: 204 YSPVTLEAKLTELSEADQKALGLIVKAAKIMDDIFYEQVWNSNPALRDWLKDHANASKLD 263
Query: 243 KLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPG 302
KLKW Y+ INKSPWSSLDENEAFL+TADSAVKLLP ATK + GWKGLEY+A+FP+ KPPG
Sbjct: 264 KLKWDYFTINKSPWSSLDENEAFLSTADSAVKLLPGATKAIAGWKGLEYRAAFPVTKPPG 323
Query: 303 ANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVG 362
ANFYPPDMDKMEF LW + LTE+Q+ AT FF+VIKRRSE NLD+S H+ +T
Sbjct: 324 ANFYPPDMDKMEFTLWLNGLTEEQKHAATGFFSVIKRRSEANLDAS--DHLASSTKKLPD 381
Query: 363 SIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAW 422
S DLYS+PYSE Y +L +ASE L KAGD+ SSPSLK+LLHSKA+AFLSN YY+SDIAW
Sbjct: 382 SNSDLYSIPYSEIYRPFLKKASEFLQKAGDLVSSPSLKKLLHSKAEAFLSNEYYESDIAW 441
Query: 423 IELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMD 482
++LDS+LD+TIGPYETYED IFGYKATFE FIGIRDDKATA +KLFGDNL++LE NLP++
Sbjct: 442 MDLDSKLDITIGPYETYEDEIFGYKATFETFIGIRDDKATADLKLFGDNLKLLEDNLPLE 501
Query: 483 NAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKF 542
+ YKS DV AAPIRVIQLIYNSGDVKGPQTVA+NLPNDE+IVKDRGTSMVMLKNV EAKF
Sbjct: 502 SVYKSTDVSAAPIRVIQLIYNSGDVKGPQTVAYNLPNDEKIVKDRGTSMVMLKNVQEAKF 561
Query: 543 KNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQEL 602
++IL+PIA++ I KEQ+ LVDFDSFFTH ICHECCHGIGPH+ITLP G+ STVR ELQE+
Sbjct: 562 EHILKPIAEITISKEQRGLVDFDSFFTHTICHECCHGIGPHTITLPGGQTSTVRKELQEV 621
Query: 603 HSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQAL 662
HSAMEEAKADIVGLWALKFLI + LL KS+V+SMYVSFLAGCFRS+RFGL E+HGKGQAL
Sbjct: 622 HSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYVSFLAGCFRSIRFGLTEAHGKGQAL 681
Query: 663 QFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMT 722
QFN+L+EK AF+ H D TFSVDF K+EGAVESLS EILTIQ +GDK AA+LLL KYCT+T
Sbjct: 682 QFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEILTIQGKGDKNAATLLLNKYCTIT 741
Query: 723 QPLKVALQKLENVQVPVDIAPTFTAVNKLL 752
PLK AL+ LE V+VPVDI+PTF L+
Sbjct: 742 GPLKTALENLERVKVPVDISPTFPLAEALM 771
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| UNIPROTKB|Q486U4 CPS_1178 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
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| TIGR_CMR|CPS_1178 CPS_1178 "lipoprotein, putative" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0269784 DDB_G0269784 "Uncharacterized Nudix hydrolase yfcD" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|BA_1964 BA_1964 "mutT/nudix family protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CBU_0607 CBU_0607 "diphosphomevalonate decarboxylase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000061206 AN0579 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|SPO_0131 SPO_0131 "isopentyl-diphosphate delta-isomerase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPBC106.15 idi1 "isopentenyl-diphosphate delta-isomerase Idi1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171382 IPP1 "isopentenyl diphosphate isomerase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8L831 | NUDT3_ARATH | 3, ., 6, ., 1, ., - | 0.7390 | 0.9946 | 0.9702 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.6.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.487.9.1 | nudix hydrolase homolog 3/hydrolase (EC-5.3.3.2) (752 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 753 | |||
| PLN02791 | 770 | PLN02791, PLN02791, Nudix hydrolase homolog | 0.0 | |
| cd04692 | 144 | cd04692, Nudix_Hydrolase_33, Members of the Nudix | 7e-55 | |
| cd04693 | 127 | cd04693, Nudix_Hydrolase_34, Members of the Nudix | 2e-23 | |
| cd02885 | 165 | cd02885, IPP_Isomerase, Isopentenyl diphosphate (I | 9e-17 | |
| COG1443 | 185 | COG1443, Idi, Isopentenyldiphosphate isomerase [Li | 3e-15 | |
| TIGR02150 | 158 | TIGR02150, IPP_isom_1, isopentenyl-diphosphate del | 1e-14 | |
| cd04697 | 126 | cd04697, Nudix_Hydrolase_38, Members of the Nudix | 4e-13 | |
| pfam00293 | 133 | pfam00293, NUDIX, NUDIX domain | 7e-12 | |
| cd02883 | 123 | cd02883, Nudix_Hydrolase, Nudix hydrolase is a sup | 5e-10 | |
| cd04682 | 122 | cd04682, Nudix_Hydrolase_23, Members of the Nudix | 1e-08 | |
| PLN02552 | 247 | PLN02552, PLN02552, isopentenyl-diphosphate delta- | 2e-08 | |
| PRK03759 | 184 | PRK03759, PRK03759, isopentenyl-diphosphate delta- | 2e-08 | |
| PRK15393 | 180 | PRK15393, PRK15393, NUDIX hydrolase YfcD; Provisio | 3e-08 | |
| cd03676 | 180 | cd03676, Nudix_hydrolase_3, Members of the Nudix h | 1e-06 | |
| cd04691 | 117 | cd04691, Nudix_Hydrolase_32, Members of the Nudix | 5e-06 | |
| cd04690 | 118 | cd04690, Nudix_Hydrolase_31, Members of the Nudix | 1e-05 | |
| cd04694 | 143 | cd04694, Nudix_Hydrolase_35, Members of the Nudix | 1e-05 | |
| COG0494 | 161 | COG0494, MutT, NTP pyrophosphohydrolases including | 1e-05 | |
| cd04683 | 120 | cd04683, Nudix_Hydrolase_24, Members of the Nudix | 4e-05 | |
| cd04664 | 129 | cd04664, Nudix_Hydrolase_7, Members of the Nudix h | 6e-05 | |
| cd04670 | 127 | cd04670, Nudix_Hydrolase_12, Members of the Nudix | 1e-04 | |
| PRK09438 | 148 | PRK09438, nudB, dihydroneopterin triphosphate pyro | 1e-04 | |
| cd04677 | 132 | cd04677, Nudix_Hydrolase_18, Members of the Nudix | 4e-04 | |
| cd04681 | 130 | cd04681, Nudix_Hydrolase_22, Members of the Nudix | 5e-04 | |
| pfam03571 | 550 | pfam03571, Peptidase_M49, Peptidase family M49 | 8e-04 | |
| cd03426 | 157 | cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse) | 0.001 | |
| PRK08999 | 312 | PRK08999, PRK08999, hypothetical protein; Provisio | 0.001 | |
| cd04699 | 129 | cd04699, Nudix_Hydrolase_39, Members of the Nudix | 0.002 |
| >gnl|CDD|215425 PLN02791, PLN02791, Nudix hydrolase homolog | Back alignment and domain information |
|---|
Score = 1438 bits (3725), Expect = 0.0
Identities = 586/751 (78%), Positives = 661/751 (88%), Gaps = 4/751 (0%)
Query: 2 SEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQ 61
EVHR GDYHR V+ WI++ESTQELLLQRRAD KDSWPG WDISSAGHISAGD+SL+SAQ
Sbjct: 23 GEVHRDGDYHRAVHVWIYSESTQELLLQRRADCKDSWPGQWDISSAGHISAGDTSLLSAQ 82
Query: 62 RELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQT 121
REL+EELGI LPKDAFE +F FLQ+ VINDGKFINNE+ DVYLVTTL+PIPLEAFTLQ++
Sbjct: 83 RELEEELGIILPKDAFELLFVFLQECVINDGKFINNEYNDVYLVTTLDPIPLEAFTLQES 142
Query: 122 EVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQLR 181
EVSAVKY++ EEYK+ LAK+DP++VPYDVNG YGQLF+II +RYK NT RSLTLQKQL
Sbjct: 143 EVSAVKYMSIEEYKSALAKEDPAYVPYDVNGEYGQLFSIIEKRYKVNTEARSLTLQKQLN 202
Query: 182 RYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASEL 241
RYA V+L AEL GLS+ D++AL +IKAA ++D+IFY QVW SNP LRDWLK HA+ASEL
Sbjct: 203 RYAPVNLEAELTGLSEGDRKALSYIIKAAKILDDIFYEQVWNSNPALRDWLKAHAEASEL 262
Query: 242 DKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPP 301
DKLKW YY INKSPWS LDENEAFLTTADSAVKLLP ATK V+GWKGLEY+A+FP+ KPP
Sbjct: 263 DKLKWAYYSINKSPWSCLDENEAFLTTADSAVKLLPGATKSVSGWKGLEYRAAFPVEKPP 322
Query: 302 GANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSV 361
GANFYPPDMDKMEFELWKS LTEK+QEDAT FFTVIKR SE +LD+S T
Sbjct: 323 GANFYPPDMDKMEFELWKSGLTEKEQEDATGFFTVIKRHSELSLDASDQLDGSTQT---- 378
Query: 362 GSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIA 421
+ +DL+SVPYSEEY +L +A+ELLHKAGD A SPSLKRLL SKA+AFLSN+YY+SDIA
Sbjct: 379 DTSHDLFSVPYSEEYKPFLKKAAELLHKAGDCADSPSLKRLLKSKAEAFLSNDYYESDIA 438
Query: 422 WIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPM 481
W+ELDS+LDVTIGPYETYED +FGYKATFEAFIGIRDDKATAQ+KLFGDNLQ LE NLP+
Sbjct: 439 WMELDSKLDVTIGPYETYEDGLFGYKATFEAFIGIRDDKATAQLKLFGDNLQTLEDNLPL 498
Query: 482 DNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAK 541
D+ YKS +V AAPIRVIQL+YNSGDVKGPQTVAFNLPNDERIVK+RGTSMVMLKNVSEAK
Sbjct: 499 DDVYKSTNVSAAPIRVIQLLYNSGDVKGPQTVAFNLPNDERIVKERGTSMVMLKNVSEAK 558
Query: 542 FKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQE 601
FK+IL+PIA+VCI +EQ+ VDF+SFFTH ICHECCHGIGPH+ITLPDG++STVRLELQE
Sbjct: 559 FKHILKPIAEVCISEEQKGYVDFESFFTHTICHECCHGIGPHTITLPDGQKSTVRLELQE 618
Query: 602 LHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQA 661
+HSA+EEAKADIVGLWAL FLI + LL KSL KSMYVSFLAGCFRS+RFGLEE+HGKGQA
Sbjct: 619 VHSALEEAKADIVGLWALHFLIDKGLLSKSLEKSMYVSFLAGCFRSIRFGLEEAHGKGQA 678
Query: 662 LQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTM 721
LQFNWL+EK AF+LHSD TFSVDF KVE AVESLS EILTIQA+GDK AA LLQKY T+
Sbjct: 679 LQFNWLYEKGAFVLHSDGTFSVDFAKVEDAVESLSREILTIQAKGDKAAAISLLQKYATL 738
Query: 722 TQPLKVALQKLENVQVPVDIAPTFTAVNKLL 752
T PL+VAL+KLE+VQVPVDI PTF KLL
Sbjct: 739 TPPLRVALEKLEDVQVPVDIVPTFPTAEKLL 769
|
Length = 770 |
| >gnl|CDD|240048 cd04692, Nudix_Hydrolase_33, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|240049 cd04693, Nudix_Hydrolase_34, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|239218 cd02885, IPP_Isomerase, Isopentenyl diphosphate (IPP) isomerase, a member of the Nudix hydrolase superfamily, is a key enzyme in the isoprenoid biosynthetic pathway | Back alignment and domain information |
|---|
| >gnl|CDD|224360 COG1443, Idi, Isopentenyldiphosphate isomerase [Lipid metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|233749 TIGR02150, IPP_isom_1, isopentenyl-diphosphate delta-isomerase, type 1 | Back alignment and domain information |
|---|
| >gnl|CDD|240053 cd04697, Nudix_Hydrolase_38, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|215841 pfam00293, NUDIX, NUDIX domain | Back alignment and domain information |
|---|
| >gnl|CDD|239217 cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|240038 cd04682, Nudix_Hydrolase_23, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|215303 PLN02552, PLN02552, isopentenyl-diphosphate delta-isomerase | Back alignment and domain information |
|---|
| >gnl|CDD|235156 PRK03759, PRK03759, isopentenyl-diphosphate delta-isomerase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185291 PRK15393, PRK15393, NUDIX hydrolase YfcD; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239648 cd03676, Nudix_hydrolase_3, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|240047 cd04691, Nudix_Hydrolase_32, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|240046 cd04690, Nudix_Hydrolase_31, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|240050 cd04694, Nudix_Hydrolase_35, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|223568 COG0494, MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes [DNA replication, recombination, and repair / General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|240039 cd04683, Nudix_Hydrolase_24, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|240022 cd04664, Nudix_Hydrolase_7, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|240027 cd04670, Nudix_Hydrolase_12, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|236516 PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240033 cd04677, Nudix_Hydrolase_18, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|240037 cd04681, Nudix_Hydrolase_22, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >gnl|CDD|217619 pfam03571, Peptidase_M49, Peptidase family M49 | Back alignment and domain information |
|---|
| >gnl|CDD|239518 cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes | Back alignment and domain information |
|---|
| >gnl|CDD|236361 PRK08999, PRK08999, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240054 cd04699, Nudix_Hydrolase_39, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 753 | |||
| PLN02791 | 770 | Nudix hydrolase homolog | 100.0 | |
| PF03571 | 549 | Peptidase_M49: Peptidase family M49; InterPro: IPR | 100.0 | |
| KOG3675 | 417 | consensus Dipeptidyl peptidase III [General functi | 100.0 | |
| TIGR02150 | 158 | IPP_isom_1 isopentenyl-diphosphate delta-isomerase | 99.85 | |
| cd02885 | 165 | IPP_Isomerase Isopentenyl diphosphate (IPP) isomer | 99.84 | |
| PLN02552 | 247 | isopentenyl-diphosphate delta-isomerase | 99.84 | |
| cd04692 | 144 | Nudix_Hydrolase_33 Members of the Nudix hydrolase | 99.83 | |
| cd03676 | 180 | Nudix_hydrolase_3 Members of the Nudix hydrolase s | 99.83 | |
| PRK03759 | 184 | isopentenyl-diphosphate delta-isomerase; Provision | 99.81 | |
| COG1443 | 185 | Idi Isopentenyldiphosphate isomerase [Lipid metabo | 99.77 | |
| cd04697 | 126 | Nudix_Hydrolase_38 Members of the Nudix hydrolase | 99.74 | |
| cd04693 | 127 | Nudix_Hydrolase_34 Members of the Nudix hydrolase | 99.74 | |
| PRK15393 | 180 | NUDIX hydrolase YfcD; Provisional | 99.72 | |
| PRK15434 | 159 | GDP-mannose mannosyl hydrolase NudD; Provisional | 99.69 | |
| cd03430 | 144 | GDPMH GDP-mannose glycosyl hydrolase (AKA GDP-mann | 99.68 | |
| cd04679 | 125 | Nudix_Hydrolase_20 Members of the Nudix hydrolase | 99.66 | |
| KOG0142 | 225 | consensus Isopentenyl pyrophosphate:dimethylallyl | 99.66 | |
| cd04683 | 120 | Nudix_Hydrolase_24 Members of the Nudix hydrolase | 99.64 | |
| PRK15472 | 141 | nucleoside triphosphatase NudI; Provisional | 99.64 | |
| cd04682 | 122 | Nudix_Hydrolase_23 Members of the Nudix hydrolase | 99.64 | |
| cd04678 | 129 | Nudix_Hydrolase_19 Members of the Nudix hydrolase | 99.63 | |
| cd04684 | 128 | Nudix_Hydrolase_25 Contains a crystal structure of | 99.62 | |
| PF00293 | 134 | NUDIX: NUDIX domain; InterPro: IPR000086 The gener | 99.62 | |
| cd03671 | 147 | Ap4A_hydrolase_plant_like Diadenosine tetraphospha | 99.61 | |
| cd04673 | 122 | Nudix_Hydrolase_15 Members of the Nudix hydrolase | 99.61 | |
| cd04691 | 117 | Nudix_Hydrolase_32 Members of the Nudix hydrolase | 99.61 | |
| cd04681 | 130 | Nudix_Hydrolase_22 Members of the Nudix hydrolase | 99.6 | |
| cd04694 | 143 | Nudix_Hydrolase_35 Members of the Nudix hydrolase | 99.6 | |
| cd04696 | 125 | Nudix_Hydrolase_37 Members of the Nudix hydrolase | 99.6 | |
| cd04700 | 142 | DR1025_like DR1025 from Deinococcus radiodurans, a | 99.59 | |
| PLN02325 | 144 | nudix hydrolase | 99.59 | |
| cd03424 | 137 | ADPRase_NUDT5 ADP-ribose pyrophosphatase (ADPRase) | 99.59 | |
| cd03426 | 157 | CoAse Coenzyme A pyrophosphatase (CoAse), a member | 99.59 | |
| PRK09438 | 148 | nudB dihydroneopterin triphosphate pyrophosphatase | 99.58 | |
| cd04687 | 128 | Nudix_Hydrolase_28 Members of the Nudix hydrolase | 99.58 | |
| cd04664 | 129 | Nudix_Hydrolase_7 Members of the Nudix hydrolase s | 99.58 | |
| cd03674 | 138 | Nudix_Hydrolase_1 Members of the Nudix hydrolase s | 99.57 | |
| COG1051 | 145 | ADP-ribose pyrophosphatase [Nucleotide transport a | 99.57 | |
| cd03673 | 131 | Ap6A_hydrolase Diadenosine hexaphosphate (Ap6A) hy | 99.56 | |
| cd04689 | 125 | Nudix_Hydrolase_30 Members of the Nudix hydrolase | 99.54 | |
| cd04699 | 129 | Nudix_Hydrolase_39 Members of the Nudix hydrolase | 99.54 | |
| cd04677 | 132 | Nudix_Hydrolase_18 Members of the Nudix hydrolase | 99.54 | |
| cd03675 | 134 | Nudix_Hydrolase_2 Contains a crystal structure of | 99.54 | |
| cd04680 | 120 | Nudix_Hydrolase_21 Members of the Nudix hydrolase | 99.54 | |
| PRK00714 | 156 | RNA pyrophosphohydrolase; Reviewed | 99.54 | |
| cd03427 | 137 | MTH1 MutT homolog-1 (MTH1) is a member of the Nudi | 99.52 | |
| cd04671 | 123 | Nudix_Hydrolase_13 Members of the Nudix hydrolase | 99.52 | |
| cd04688 | 126 | Nudix_Hydrolase_29 Members of the Nudix hydrolase | 99.51 | |
| cd04690 | 118 | Nudix_Hydrolase_31 Members of the Nudix hydrolase | 99.51 | |
| cd03429 | 131 | NADH_pyrophosphatase NADH pyrophosphatase, a membe | 99.5 | |
| cd04670 | 127 | Nudix_Hydrolase_12 Members of the Nudix hydrolase | 99.5 | |
| cd04666 | 122 | Nudix_Hydrolase_9 Members of the Nudix hydrolase s | 99.49 | |
| cd04672 | 123 | Nudix_Hydrolase_14 Members of the Nudix hydrolase | 99.49 | |
| cd04695 | 131 | Nudix_Hydrolase_36 Members of the Nudix hydrolase | 99.48 | |
| cd03428 | 130 | Ap4A_hydrolase_human_like Diadenosine tetraphospha | 99.48 | |
| cd04685 | 133 | Nudix_Hydrolase_26 Members of the Nudix hydrolase | 99.47 | |
| cd04511 | 130 | Nudix_Hydrolase_4 Members of the Nudix hydrolase s | 99.47 | |
| PRK05379 | 340 | bifunctional nicotinamide mononucleotide adenylylt | 99.46 | |
| cd04676 | 129 | Nudix_Hydrolase_17 Members of the Nudix hydrolase | 99.46 | |
| cd04669 | 121 | Nudix_Hydrolase_11 Members of the Nudix hydrolase | 99.46 | |
| cd03672 | 145 | Dcp2p mRNA decapping enzyme 2 (Dcp2p), the catalyt | 99.44 | |
| cd04667 | 112 | Nudix_Hydrolase_10 Members of the Nudix hydrolase | 99.43 | |
| PLN02839 | 372 | nudix hydrolase | 99.43 | |
| cd04686 | 131 | Nudix_Hydrolase_27 Members of the Nudix hydrolase | 99.42 | |
| PRK10546 | 135 | pyrimidine (deoxy)nucleoside triphosphate pyrophos | 99.42 | |
| PRK00241 | 256 | nudC NADH pyrophosphatase; Reviewed | 99.41 | |
| cd03425 | 124 | MutT_pyrophosphohydrolase The MutT pyrophosphohydr | 99.4 | |
| cd02883 | 123 | Nudix_Hydrolase Nudix hydrolase is a superfamily o | 99.39 | |
| PRK10776 | 129 | nucleoside triphosphate pyrophosphohydrolase; Prov | 99.38 | |
| cd04661 | 132 | MRP_L46 Mitochondrial ribosomal protein L46 (MRP L | 99.36 | |
| TIGR00586 | 128 | mutt mutator mutT protein. All proteins in this fa | 99.33 | |
| PRK11762 | 185 | nudE adenosine nucleotide hydrolase NudE; Provisio | 99.32 | |
| TIGR00052 | 185 | nudix-type nucleoside diphosphatase, YffH/AdpP fam | 99.32 | |
| PRK10707 | 190 | putative NUDIX hydrolase; Provisional | 99.31 | |
| cd04662 | 126 | Nudix_Hydrolase_5 Members of the Nudix hydrolase s | 99.28 | |
| cd03670 | 186 | ADPRase_NUDT9 ADP-ribose pyrophosphatase (ADPRase) | 99.23 | |
| TIGR02705 | 156 | nudix_YtkD nucleoside triphosphatase YtkD. The fun | 99.2 | |
| PRK10729 | 202 | nudF ADP-ribose pyrophosphatase NudF; Provisional | 99.19 | |
| cd04665 | 118 | Nudix_Hydrolase_8 Members of the Nudix hydrolase s | 99.17 | |
| PLN02709 | 222 | nudix hydrolase | 99.16 | |
| PRK15009 | 191 | GDP-mannose pyrophosphatase NudK; Provisional | 99.14 | |
| cd04674 | 118 | Nudix_Hydrolase_16 Members of the Nudix hydrolase | 99.13 | |
| PRK08999 | 312 | hypothetical protein; Provisional | 99.12 | |
| COG2816 | 279 | NPY1 NTP pyrophosphohydrolases containing a Zn-fin | 99.03 | |
| KOG4313 | 306 | consensus Thiamine pyrophosphokinase [Nucleotide t | 98.82 | |
| cd04663 | 126 | Nudix_Hydrolase_6 Members of the Nudix hydrolase s | 98.79 | |
| COG0494 | 161 | MutT NTP pyrophosphohydrolases including oxidative | 98.77 | |
| PLN03143 | 291 | nudix hydrolase; Provisional | 98.72 | |
| KOG3084 | 345 | consensus NADH pyrophosphatase I of the Nudix fami | 98.68 | |
| KOG2839 | 145 | consensus Diadenosine and diphosphoinositol polyph | 98.65 | |
| KOG3069 | 246 | consensus Peroxisomal NUDIX hydrolase [Replication | 98.58 | |
| cd03431 | 118 | DNA_Glycosylase_C DNA glycosylase (MutY in bacteri | 98.44 | |
| KOG0648 | 295 | consensus Predicted NUDIX hydrolase FGF-2 and rela | 98.41 | |
| KOG3041 | 225 | consensus Nucleoside diphosphate-sugar hydrolase o | 98.26 | |
| COG4119 | 161 | Predicted NTP pyrophosphohydrolase [DNA replicatio | 97.79 | |
| PF14815 | 114 | NUDIX_4: NUDIX domain; PDB: 1VRL_A 1RRQ_A 3G0Q_A 3 | 97.45 | |
| COG4112 | 203 | Predicted phosphoesterase (MutT family) [General f | 96.28 | |
| KOG4195 | 275 | consensus Transient receptor potential-related cha | 95.26 | |
| COG4227 | 316 | Antirestriction protein [DNA replication, recombin | 92.71 | |
| KOG4432 | 405 | consensus Uncharacterized NUDIX family hydrolase [ | 92.18 | |
| KOG4432 | 405 | consensus Uncharacterized NUDIX family hydrolase [ | 91.48 | |
| PF13869 | 188 | NUDIX_2: Nucleotide hydrolase; PDB: 3MDG_B 2J8Q_B | 91.21 | |
| PRK10880 | 350 | adenine DNA glycosylase; Provisional | 89.88 | |
| COG4111 | 322 | Uncharacterized conserved protein [General functio | 88.27 | |
| PF14443 | 126 | DBC1: DBC1 | 85.24 | |
| KOG2937 | 348 | consensus Decapping enzyme complex, predicted pyro | 84.92 | |
| KOG3675 | 417 | consensus Dipeptidyl peptidase III [General functi | 82.91 |
| >PLN02791 Nudix hydrolase homolog | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-167 Score=1441.41 Aligned_cols=747 Identities=78% Similarity=1.234 Sum_probs=693.9
Q ss_pred ccccccCCceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEE
Q 004451 2 SEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVF 81 (753)
Q Consensus 2 ~~vh~~g~~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~ 81 (753)
+++|..|.+|++|+|+|++.++++||||||+..|..+||+|+++||||++.||++.+||+||++||+||.+....+..++
T Consensus 23 ~evH~~Gl~HrAvhVwIfn~~~gelLLQkRS~~K~~~PG~WDiS~gGHv~aGEs~~eAA~REL~EELGI~l~~~~l~~l~ 102 (770)
T PLN02791 23 GEVHRDGDYHRAVHVWIYSESTQELLLQRRADCKDSWPGQWDISSAGHISAGDTSLLSAQRELEEELGIILPKDAFELLF 102 (770)
T ss_pred HhhccCCCceEEEEEEEEECCCCeEEEEEecCCCCCCCCcccCcCCCCCCCCCCHHHHHHHHHHHHhCCCCChhheeeee
Confidence 57999999999999999994368999999999999999999998899999999999999999999999997666677777
Q ss_pred EEEeeeecCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcCCCCcccCCCCCchhHHHHHH
Q 004451 82 TFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 161 (753)
Q Consensus 82 ~~~~~~~~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~~~~~~pw~~~~~~~~~f~~i 161 (753)
.+.+.....++.+.+++++++|.+....+.+..++.++++|+++++|++++|+.+++...+..|+||...+.+..+|++|
T Consensus 103 ~~~~~~~~~~g~~~e~E~~~VYlv~~~~~~p~~~~~lq~eEV~~v~wvsl~El~~~l~~~~~~fvP~~~~~~~~~~f~~i 182 (770)
T PLN02791 103 VFLQECVINDGKFINNEYNDVYLVTTLDPIPLEAFTLQESEVSAVKYMSIEEYKSALAKEDPAYVPYDVNGEYGQLFSII 182 (770)
T ss_pred eEEEEeeccCCCcceeeEEEEEEEEECCCCCcccCCCChhhhheeEEEcHHHHHHHHhcCCCceeeccccchHHHHHHHH
Confidence 77554443445567889999999876556665677889999999999999999999998889999998888999999999
Q ss_pred HHHhhhhhhhhhHHHHHHHhhhhccccchhhcCCCHHHHHHHHHHHHHhhhccceeeeccCCCCHHHHHHHHhhhcccch
Q 004451 162 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASEL 241 (753)
Q Consensus 162 ~~~~~~~~~~~~lell~r~~~~~pv~~~~~f~~Lt~~Ek~yl~~l~~Aa~~g~~I~~~Q~s~e~~~i~~~l~~~~~~~~~ 241 (753)
.+.|......|+.++++++.+|.|+.++.+++.||+.|++++.+|.+||..+++|+|+|++..++.+++.|......+..
T Consensus 183 ~~~~~~~~~~r~~~l~~~l~~~~~~~l~~d~~~l~~~~~~~l~~l~~aa~~~d~~f~~q~~~~~~~~~~~l~~~~~~~~~ 262 (770)
T PLN02791 183 EKRYKVNTEARSLTLQKQLNRYAPVNLEAELTGLSEGDRKALSYIIKAAKILDDIFYEQVWNSNPALRDWLKAHAEASEL 262 (770)
T ss_pred HHHHhcccHHHHHHHHHHhhCcceeEeeeccccCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHhhhcccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877655566
Q ss_pred hHHHHHHhhccCCCCCCCCCCHHHHHHHHhhcccCCCCCCCccccccccccccCCCCCCCCCccCCCCCCHHHHHHHHhh
Q 004451 242 DKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSS 321 (753)
Q Consensus 242 ~~~~~~~~~~n~g~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~gs~yYp~~it~~e~~~~~~~ 321 (753)
.+++|.+|.+|+|||++++.+++|+++.+++++++|.+.+.+..|.+...++-|+..+|+|+||||.|||++||++|.+.
T Consensus 263 ~~~~~~~~~in~gpW~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ga~~YP~d~~~~ef~~~~~~ 342 (770)
T PLN02791 263 DKLKWAYYSINKSPWSCLDENEAFLTTADSAVKLLPGATKSVSGWKGLEYRAAFPVEKPPGANFYPPDMDKMEFELWKSG 342 (770)
T ss_pred chHHHHHHHHhcCcccccCCCCCCcCCcchhhhcccccccccccccccchhccccCCCCCCCCcCCCCCCHHHHHHHHhh
Confidence 67778999999999999999999999999999999988899999988877888887799999999999999999999999
Q ss_pred hchhhhhcccccceeEeecCCCcccCCCcCCcccCCCCccccCCcEEEEeeccccHHHHHHHHHHHHHHhhccCChHHHH
Q 004451 322 LTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 401 (753)
Q Consensus 322 ~~~~~~~~~~~~~t~~~k~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~y~g~y~~~l~~v~~~L~~A~~~a~n~~q~~ 401 (753)
+++.+++.+.++||+|+|+.+..+.++...+ ..+... ..|+|++|||+++|+++|++|+.+|++|++||+|++|++
T Consensus 343 ~~~~~~~~~~~~~t~i~r~~~~~~~~~~~~~---~~~~~~-~~~~L~~vpys~~Y~~~l~~i~~~L~~A~~~a~n~~q~~ 418 (770)
T PLN02791 343 LTEKEQEDATGFFTVIKRHSELSLDASDQLD---GSTQTD-TSHDLFSVPYSEEYKPFLKKAAELLHKAGDCADSPSLKR 418 (770)
T ss_pred CChhhHHhhcCCeEEEEeccccccccccccc---cccccC-CCCCEEEecccHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 9888899999999999998754444432211 111111 358899999999999999999999999999999999999
Q ss_pred HHHHHHHHcccCccchhcHhhhccCCeeeeeecccccccccccCccccceeeEEeeCHHHHHHHHHHhhcHHHHHHhCCC
Q 004451 402 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPM 481 (753)
Q Consensus 402 ~L~~~~~~f~tg~~~~s~~~Wv~d~~~ve~~iGfiE~Y~Dp~~g~ra~~E~~V~i~d~~~s~~~~~l~~~a~~~~~~lPw 481 (753)
||.+||++|+|++|++||++||+++|+||++|||||||+||+||+||+|||||+|+|+++|+||++|+++||+||++|||
T Consensus 419 ~L~~~a~~F~t~~~~~s~~~Wvk~~~~ve~~iGfiEtY~Dpl~G~ka~fE~fV~i~d~e~t~k~~~~~~~a~~~e~~LP~ 498 (770)
T PLN02791 419 LLKSKAEAFLSNDYYESDIAWMELDSKLDVTIGPYETYEDGLFGYKATFEAFIGIRDDKATAQLKLFGDNLQTLEDNLPL 498 (770)
T ss_pred HHHHHHHHhhccchHHHHHHHHhcCCceeEeeCCceeccCcccCcceeeEEEEEEeCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCcceeeeeeccCCCCCCcceeecCCCchHHHhhccceeEEecchhhhhhccccccccccccCHhhHhh
Q 004451 482 DNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQEL 561 (753)
Q Consensus 482 ~~~~ek~~~~~pd~~~~~vl~~~g~~~~~~~~giNlPN~~~ir~~~G~Knv~l~Nv~~a~~~~~~~~~~~~~i~~~~~~~ 561 (753)
+++|||++|..|||+||||++||||+.|++|||||||||||||+++|||||||+|||+|++++...|++++|++++|+++
T Consensus 499 ~~~~~k~~~~~~~~~~i~v~~~aGd~~~~~pigiNLPN~d~Ir~~~G~K~V~L~Nv~~A~~~~~~~~i~e~~i~~~~~~~ 578 (770)
T PLN02791 499 DDVYKSTNVSAAPIRVIQLLYNSGDVKGPQTVAFNLPNDERIVKERGTSMVMLKNVSEAKFKHILKPIAEVCISEEQKGY 578 (770)
T ss_pred ChhhcccccCCCCCceeehhhhccccCCCCCceeECCCcHHHHhhcCceEeeecchhhhhccccccchhhhcCCHHHHHh
Confidence 99999999999999999999999999888999999999999999999999999999999998887899999999999999
Q ss_pred hcccccchhhhhhhcccCcCCCCcccCCcccccccchhhcccchHHhHHHHHHHHHHHHHHHhCCCCCchhhhHHHHHHH
Q 004451 562 VDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 641 (753)
Q Consensus 562 ~~~~~~~~~v~lHElgHgsGk~~~~~~~g~~~t~~~~f~~~~s~~EEcRAe~vglyl~~~ll~~g~~~~~~~~~~y~~~l 641 (753)
+++++|++||+||||||||||+++++++|++.||..+||+++|||||||||+||||++.+|+++|++++.+.+++|++||
T Consensus 579 ~~~~af~~~v~lHElgHGsG~~~~~~~~g~~~t~~~~l~~~~s~lEE~RAD~vgLy~l~~l~~~g~l~~~~~~~~Y~~~l 658 (770)
T PLN02791 579 VDFESFFTHTICHECCHGIGPHTITLPDGQKSTVRLELQEVHSALEEAKADIVGLWALHFLIDKGLLSKSLEKSMYVSFL 658 (770)
T ss_pred hccccHHHHHHHHHhhccccccceecCCCCcCcHHHHHHHhcchHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHH
Confidence 99999999999999999999998888787778999999999999999999999999999999999998888899999999
Q ss_pred HHHHhhhccCccchhHhHHHHHHHHHhhcCCeEEccCCcEEEeHhhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhcCC
Q 004451 642 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTM 721 (753)
Q Consensus 642 ~~~~~~l~f~~~qaH~~ar~~i~~~~~~~g~~~~~~~g~~~vD~~ki~~av~~ll~~l~~~ks~gD~~a~~~~~e~~~~v 721 (753)
+|++|+||||.+|||||||++|+|||+++|+|+.++||+|++|++||+.||++||++||+|||+||+++|++||++|++|
T Consensus 659 ~~~~~~vR~GleqAH~~ar~~i~~~~le~G~~~~~~dg~~~vD~~Ki~~av~~ll~~l~~iks~GD~~aa~~l~e~y~~v 738 (770)
T PLN02791 659 AGCFRSIRFGLEEAHGKGQALQFNWLYEKGAFVLHSDGTFSVDFAKVEDAVESLSREILTIQAKGDKAAAISLLQKYATL 738 (770)
T ss_pred HHHHHHhhccccCHHHHHHHHHHHHHHHcCCEEEcCCceEEEcHHHHHHHHHHHHHHHHeeecccCHHHHHHHHHHhccC
Confidence 99999999999999999999999999999998876789999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhhccCCCCccccccccccccc
Q 004451 722 TQPLKVALQKLENVQVPVDIAPTFTAVNKLL 752 (753)
Q Consensus 722 ~~~~~~~l~r~~~~~~p~~i~~~f~~~~~~~ 752 (753)
+++|+.+|++++..+|||||+|+|+|++.+|
T Consensus 739 ~~~~~~~l~~~~~~~~pvdi~~~~~~~~~~~ 769 (770)
T PLN02791 739 TPPLRVALEKLEDVQVPVDIVPTFPTAEKLL 769 (770)
T ss_pred CHHHHHHHHHhhhCCCCCCccccccchhhhc
Confidence 9999999999999999999999999998776
|
|
| >PF03571 Peptidase_M49: Peptidase family M49; InterPro: IPR005317 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >KOG3675 consensus Dipeptidyl peptidase III [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02150 IPP_isom_1 isopentenyl-diphosphate delta-isomerase, type 1 | Back alignment and domain information |
|---|
| >cd02885 IPP_Isomerase Isopentenyl diphosphate (IPP) isomerase, a member of the Nudix hydrolase superfamily, is a key enzyme in the isoprenoid biosynthetic pathway | Back alignment and domain information |
|---|
| >PLN02552 isopentenyl-diphosphate delta-isomerase | Back alignment and domain information |
|---|
| >cd04692 Nudix_Hydrolase_33 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd03676 Nudix_hydrolase_3 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >PRK03759 isopentenyl-diphosphate delta-isomerase; Provisional | Back alignment and domain information |
|---|
| >COG1443 Idi Isopentenyldiphosphate isomerase [Lipid metabolism] | Back alignment and domain information |
|---|
| >cd04697 Nudix_Hydrolase_38 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04693 Nudix_Hydrolase_34 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >PRK15393 NUDIX hydrolase YfcD; Provisional | Back alignment and domain information |
|---|
| >PRK15434 GDP-mannose mannosyl hydrolase NudD; Provisional | Back alignment and domain information |
|---|
| >cd03430 GDPMH GDP-mannose glycosyl hydrolase (AKA GDP-mannose mannosyl hydrolase (GDPMH)) is a member of the Nudix hydrolase superfamily | Back alignment and domain information |
|---|
| >cd04679 Nudix_Hydrolase_20 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >KOG0142 consensus Isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
| >cd04683 Nudix_Hydrolase_24 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >PRK15472 nucleoside triphosphatase NudI; Provisional | Back alignment and domain information |
|---|
| >cd04682 Nudix_Hydrolase_23 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04678 Nudix_Hydrolase_19 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04684 Nudix_Hydrolase_25 Contains a crystal structure of the Nudix hydrolase from Enterococcus faecalis, which has an unknown function | Back alignment and domain information |
|---|
| >PF00293 NUDIX: NUDIX domain; InterPro: IPR000086 The generic name 'NUDIX hydrolases' (NUcleoside DIphosphate linked to some other moiety X) has been coined for this domain family [] | Back alignment and domain information |
|---|
| >cd03671 Ap4A_hydrolase_plant_like Diadenosine tetraphosphate (Ap4A) hydrolase is a member of the Nudix hydrolase superfamily | Back alignment and domain information |
|---|
| >cd04673 Nudix_Hydrolase_15 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04691 Nudix_Hydrolase_32 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04681 Nudix_Hydrolase_22 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04694 Nudix_Hydrolase_35 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04696 Nudix_Hydrolase_37 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04700 DR1025_like DR1025 from Deinococcus radiodurans, a member of the Nudix hydrolase superfamily, show nucleoside triphosphatase and dinucleoside polyphosphate pyrophosphatase activities | Back alignment and domain information |
|---|
| >PLN02325 nudix hydrolase | Back alignment and domain information |
|---|
| >cd03424 ADPRase_NUDT5 ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate | Back alignment and domain information |
|---|
| >cd03426 CoAse Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes | Back alignment and domain information |
|---|
| >PRK09438 nudB dihydroneopterin triphosphate pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >cd04687 Nudix_Hydrolase_28 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04664 Nudix_Hydrolase_7 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd03674 Nudix_Hydrolase_1 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >COG1051 ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >cd03673 Ap6A_hydrolase Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily | Back alignment and domain information |
|---|
| >cd04689 Nudix_Hydrolase_30 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04699 Nudix_Hydrolase_39 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04677 Nudix_Hydrolase_18 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd03675 Nudix_Hydrolase_2 Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function | Back alignment and domain information |
|---|
| >cd04680 Nudix_Hydrolase_21 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >PRK00714 RNA pyrophosphohydrolase; Reviewed | Back alignment and domain information |
|---|
| >cd03427 MTH1 MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily | Back alignment and domain information |
|---|
| >cd04671 Nudix_Hydrolase_13 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04688 Nudix_Hydrolase_29 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04690 Nudix_Hydrolase_31 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd03429 NADH_pyrophosphatase NADH pyrophosphatase, a member of the Nudix hydrolase superfamily, catalyzes the cleavage of NADH into reduced nicotinamide mononucleotide (NMNH) and AMP | Back alignment and domain information |
|---|
| >cd04670 Nudix_Hydrolase_12 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04666 Nudix_Hydrolase_9 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04672 Nudix_Hydrolase_14 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04695 Nudix_Hydrolase_36 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd03428 Ap4A_hydrolase_human_like Diadenosine tetraphosphate (Ap4A) hydrolase is a member of the Nudix hydrolase superfamily | Back alignment and domain information |
|---|
| >cd04685 Nudix_Hydrolase_26 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04511 Nudix_Hydrolase_4 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >cd04676 Nudix_Hydrolase_17 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd04669 Nudix_Hydrolase_11 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd03672 Dcp2p mRNA decapping enzyme 2 (Dcp2p), the catalytic subunit, and Dcp1p are the two components of the decapping enzyme complex | Back alignment and domain information |
|---|
| >cd04667 Nudix_Hydrolase_10 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >PLN02839 nudix hydrolase | Back alignment and domain information |
|---|
| >cd04686 Nudix_Hydrolase_27 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >PRK10546 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK00241 nudC NADH pyrophosphatase; Reviewed | Back alignment and domain information |
|---|
| >cd03425 MutT_pyrophosphohydrolase The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi) | Back alignment and domain information |
|---|
| >cd02883 Nudix_Hydrolase Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >PRK10776 nucleoside triphosphate pyrophosphohydrolase; Provisional | Back alignment and domain information |
|---|
| >cd04661 MRP_L46 Mitochondrial ribosomal protein L46 (MRP L46) is a component of the large subunit (39S) of the mammalian mitochondrial ribosome and a member of the Nudix hydrolase superfamily | Back alignment and domain information |
|---|
| >TIGR00586 mutt mutator mutT protein | Back alignment and domain information |
|---|
| >PRK11762 nudE adenosine nucleotide hydrolase NudE; Provisional | Back alignment and domain information |
|---|
| >TIGR00052 nudix-type nucleoside diphosphatase, YffH/AdpP family | Back alignment and domain information |
|---|
| >PRK10707 putative NUDIX hydrolase; Provisional | Back alignment and domain information |
|---|
| >cd04662 Nudix_Hydrolase_5 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >cd03670 ADPRase_NUDT9 ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose to AMP and ribose-5-P | Back alignment and domain information |
|---|
| >TIGR02705 nudix_YtkD nucleoside triphosphatase YtkD | Back alignment and domain information |
|---|
| >PRK10729 nudF ADP-ribose pyrophosphatase NudF; Provisional | Back alignment and domain information |
|---|
| >cd04665 Nudix_Hydrolase_8 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >PLN02709 nudix hydrolase | Back alignment and domain information |
|---|
| >PRK15009 GDP-mannose pyrophosphatase NudK; Provisional | Back alignment and domain information |
|---|
| >cd04674 Nudix_Hydrolase_16 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >PRK08999 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG2816 NPY1 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG4313 consensus Thiamine pyrophosphokinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >cd04663 Nudix_Hydrolase_6 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X | Back alignment and domain information |
|---|
| >COG0494 MutT NTP pyrophosphohydrolases including oxidative damage repair enzymes [DNA replication, recombination, and repair / General function prediction only] | Back alignment and domain information |
|---|
| >PLN03143 nudix hydrolase; Provisional | Back alignment and domain information |
|---|
| >KOG3084 consensus NADH pyrophosphatase I of the Nudix family of hydrolases [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG2839 consensus Diadenosine and diphosphoinositol polyphosphate phosphohydrolase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3069 consensus Peroxisomal NUDIX hydrolase [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >cd03431 DNA_Glycosylase_C DNA glycosylase (MutY in bacteria and hMYH in humans) is responsible for repairing misread A*oxoG residues to C*G by removing the inappropriately paired adenine base from the DNA backbone | Back alignment and domain information |
|---|
| >KOG0648 consensus Predicted NUDIX hydrolase FGF-2 and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3041 consensus Nucleoside diphosphate-sugar hydrolase of the MutT (NUDIX) family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG4119 Predicted NTP pyrophosphohydrolase [DNA replication, recombination, and repair / General function prediction only] | Back alignment and domain information |
|---|
| >PF14815 NUDIX_4: NUDIX domain; PDB: 1VRL_A 1RRQ_A 3G0Q_A 3FSQ_A 1RRS_A 3FSP_A | Back alignment and domain information |
|---|
| >COG4112 Predicted phosphoesterase (MutT family) [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4195 consensus Transient receptor potential-related channel 7 [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG4227 Antirestriction protein [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG4432 consensus Uncharacterized NUDIX family hydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4432 consensus Uncharacterized NUDIX family hydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >PF13869 NUDIX_2: Nucleotide hydrolase; PDB: 3MDG_B 2J8Q_B 3Q2S_A 3P5T_D 3BAP_A 2CL3_A 3P6Y_A 3Q2T_B 3BHO_A 3N9U_A | Back alignment and domain information |
|---|
| >PRK10880 adenine DNA glycosylase; Provisional | Back alignment and domain information |
|---|
| >COG4111 Uncharacterized conserved protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF14443 DBC1: DBC1 | Back alignment and domain information |
|---|
| >KOG2937 consensus Decapping enzyme complex, predicted pyrophosphatase DCP2 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG3675 consensus Dipeptidyl peptidase III [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 753 | ||||
| 1hx3_A | 190 | Crystal Structure Of E.Coli Isopentenyl Diphosphate | 3e-06 | ||
| 1q54_A | 183 | Structure And Mechanism Of Action Of Isopentenylpyr | 3e-06 | ||
| 1r67_A | 190 | Y104a Mutant Of E.coli Ipp Isomerase Length = 190 | 6e-06 | ||
| 1x84_A | 189 | Ipp Isomerase (Wt) Reacted With (S)-Bromohydrine Of | 7e-06 | ||
| 1nfs_A | 183 | Structure And Mechanism Of Action Of Isopentenylpyr | 7e-06 | ||
| 1hzt_A | 190 | Crystal Structure Of Metal-Free Isopentenyl Diphosp | 7e-06 | ||
| 1i9a_A | 182 | Structural Studies Of Cholesterol Biosynthesis: Mev | 7e-06 | ||
| 1x83_A | 189 | Y104f Ipp Isomerase Reacted With (S)-Bromohydrine O | 1e-05 | ||
| 2g73_A | 183 | Y104f Mutant Type 1 Ipp Isomerase Complex With Eipp | 1e-05 | ||
| 3hyq_A | 184 | Crystal Structure Of Isopentenyl-Diphosphate Delta- | 2e-05 | ||
| 2icj_A | 233 | The Crystal Structure Of Human Isopentenyl Diphopha | 6e-04 | ||
| 2dho_A | 235 | Crystal Structure Of Human Ipp Isomerase I In Space | 6e-04 | ||
| 2i6k_A | 235 | Crystal Structure Of Human Type I Ipp Isomerase Com | 7e-04 |
| >pdb|1HX3|A Chain A, Crystal Structure Of E.Coli Isopentenyl Diphosphate:dimethylallyl Diphosphate Isomerase Length = 190 | Back alignment and structure |
|
| >pdb|1Q54|A Chain A, Structure And Mechanism Of Action Of Isopentenylpyrophosphate-Dimethylallylpyrophosphate Isomerase: Complex With The Bromohydrine Of Ipp Length = 183 | Back alignment and structure |
| >pdb|1R67|A Chain A, Y104a Mutant Of E.coli Ipp Isomerase Length = 190 | Back alignment and structure |
| >pdb|1X84|A Chain A, Ipp Isomerase (Wt) Reacted With (S)-Bromohydrine Of Ipp Length = 189 | Back alignment and structure |
| >pdb|1NFS|A Chain A, Structure And Mechanism Of Action Of Isopentenylpyrophosphate-dimethylallylpyrophosphate Isomerase: Complex With Nipp Length = 183 | Back alignment and structure |
| >pdb|1HZT|A Chain A, Crystal Structure Of Metal-Free Isopentenyl Diphosphate:dimethylallyl Diphosphate Isomerase Length = 190 | Back alignment and structure |
| >pdb|1I9A|A Chain A, Structural Studies Of Cholesterol Biosynthesis: Mevalonate 5-Diphosphate Decarboxylase And Isopentenyl Diphosphate Isomerase Length = 182 | Back alignment and structure |
| >pdb|1X83|A Chain A, Y104f Ipp Isomerase Reacted With (S)-Bromohydrine Of Ipp Length = 189 | Back alignment and structure |
| >pdb|2G73|A Chain A, Y104f Mutant Type 1 Ipp Isomerase Complex With Eipp Length = 183 | Back alignment and structure |
| >pdb|3HYQ|A Chain A, Crystal Structure Of Isopentenyl-Diphosphate Delta-Isomerase From Salmonella Entericase Length = 184 | Back alignment and structure |
| >pdb|2ICJ|A Chain A, The Crystal Structure Of Human Isopentenyl Diphophate Isomerase Length = 233 | Back alignment and structure |
| >pdb|2DHO|A Chain A, Crystal Structure Of Human Ipp Isomerase I In Space Group P212121 Length = 235 | Back alignment and structure |
| >pdb|2I6K|A Chain A, Crystal Structure Of Human Type I Ipp Isomerase Complexed With A Substrate Analog Length = 235 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3fvy_A Dipeptidyl-peptidase 3; SGC, DPP3, alternative splicing, aminopeptidase, cytoplasm, hydrolase, metal-binding, metalloprotease, phosphoprotein; 1.90A {Homo sapiens} PDB: 3t6b_A 3t6j_A Length = 728 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 4e-71
Identities = 99/646 (15%), Positives = 200/646 (30%), Gaps = 111/646 (17%)
Query: 193 AGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLR------------DWLKEHADASE 240
LS ++ + +AA LQ P + D L +HA A
Sbjct: 26 RLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIYALLSRLFRAQDPDQLHQHALAEG 85
Query: 241 LDKLKWMYYLI-------NKSPWSSLDEN--------EAFLTTADSAVKLLPDATKPVNG 285
L + ++ +L+ N + S + E + +
Sbjct: 86 LTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPKEKLERVILGSEAAQQHPEEVRGL 145
Query: 286 WKGLE--YKASFPLPKPPG------ANFYPPD------------MDKMEFELWKSSLTEK 325
W+ + P + G ++ + +D + + L ++
Sbjct: 146 WQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMEDAKLAQDFLDSQNLSAYNTRLFKE 205
Query: 326 QQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSV-GSIYDLYSVPYSEEYNSYLTRAS 384
+ ++ V + S S ++ GS + + Y+ L +
Sbjct: 206 VDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFRGSPFQVTRGDYAPI----LQKVV 261
Query: 385 ELLHKAGDMASSPSLKRLLHSKADAFLS---NNYYDSDIAWI-ELDSELDVTIGPYETYE 440
E L KA A++ ++L ++F + WI + ++ IG E+Y
Sbjct: 262 EQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFWIQDKGPIVESYIGFIESYR 321
Query: 441 DAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQL 500
D FG + FE F+ + + +A+ + + + L + LP ++ + + +
Sbjct: 322 DP-FGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWPPTFEKDKFLTPDFTSLDV 380
Query: 501 IYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIR-KEQQ 559
+ +G N+PN + + + G V L NV + + + K+
Sbjct: 381 LTFAGSG---IPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQREKLTFLEEDDKDLY 437
Query: 560 ELVDFDSFFTHNICHECC-HGIGPHSITLPDGRQ-----------------------STV 595
L SF HE HG G + G T
Sbjct: 438 ILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPETGEQIQSWYRSGETW 497
Query: 596 RLELQELHSAMEEAKADIVGLWAL---KFLIGRDLLPKSLVKSMYVSFLAGCFRSVR--- 649
+ + S+ EE +A+ VGL+ + L +YV++L +
Sbjct: 498 DSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAGLLALE 557
Query: 650 ------FGLEESHGKGQALQFNWLFEKEAFIL----------HSDDTFSVDFDKVEG--- 690
F ++H + + + L E ++ D +D K+
Sbjct: 558 FYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSKIRSVGK 617
Query: 691 -AVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENV 735
A+E + +++ GD L + Y T+T L +
Sbjct: 618 PALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDT 663
|
| >3csk_A Probable dipeptidyl-peptidase 3; Zn-hydrolase, aminodipeptidase, hexxgh-motif, aminopeptidase hydrolase, metal-binding, metalloprotease; 1.95A {Saccharomyces cerevisiae} Length = 711 | Back alignment and structure |
|---|
| >1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A Length = 171 | Back alignment and structure |
|---|
| >2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2 Length = 180 | Back alignment and structure |
|---|
| >1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A* Length = 190 | Back alignment and structure |
|---|
| >2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A* Length = 235 | Back alignment and structure |
|---|
| >3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170} Length = 300 | Back alignment and structure |
|---|
| >2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens} Length = 246 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124} Length = 197 | Back alignment and structure |
|---|
| >3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes} Length = 149 | Back alignment and structure |
|---|
| >3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A Length = 165 | Back alignment and structure |
|---|
| >2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae} Length = 146 | Back alignment and structure |
|---|
| >2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B* Length = 271 | Back alignment and structure |
|---|
| >3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens} Length = 199 | Back alignment and structure |
|---|
| >3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei} Length = 153 | Back alignment and structure |
|---|
| >2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1 Length = 155 | Back alignment and structure |
|---|
| >2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1 Length = 148 | Back alignment and structure |
|---|
| >1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A* Length = 160 | Back alignment and structure |
|---|
| >3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans} Length = 188 | Back alignment and structure |
|---|
| >1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A* Length = 159 | Back alignment and structure |
|---|
| >3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124} Length = 159 | Back alignment and structure |
|---|
| >4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei} Length = 157 | Back alignment and structure |
|---|
| >3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A Length = 153 | Back alignment and structure |
|---|
| >3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367} Length = 161 | Back alignment and structure |
|---|
| >2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1 Length = 153 | Back alignment and structure |
|---|
| >2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A Length = 150 | Back alignment and structure |
|---|
| >1xsa_A BIS(5'-nucleosyl)-tetraphosphatase; nudix enzyme, human AP4A hydrolase, alpha-beta; NMR {Homo sapiens} SCOP: d.113.1.1 PDB: 1xsb_A 1xsc_A* Length = 153 | Back alignment and structure |
|---|
| >3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A Length = 176 | Back alignment and structure |
|---|
| >1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A Length = 156 | Back alignment and structure |
|---|
| >2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6 Length = 273 | Back alignment and structure |
|---|
| >3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718} Length = 189 | Back alignment and structure |
|---|
| >2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans} Length = 145 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 753 | |||
| 3fvy_A | 728 | Dipeptidyl-peptidase 3; SGC, DPP3, alternative spl | 100.0 | |
| 3csk_A | 711 | Probable dipeptidyl-peptidase 3; Zn-hydrolase, ami | 100.0 | |
| 3dup_A | 300 | MUTT/nudix family protein; nudix superfamily hydro | 99.83 | |
| 2dho_A | 235 | Isopentenyl-diphosphate delta-isomerase 1; alpha/b | 99.83 | |
| 2pny_A | 246 | Isopentenyl-diphosphate delta-isomerase 2; caroten | 99.83 | |
| 2fb1_A | 226 | Conserved hypothetical protein; structural genomic | 99.78 | |
| 1hzt_A | 190 | Isopentenyl diphosphate delta-isomerase; dimethyla | 99.78 | |
| 3gz5_A | 240 | MUTT/nudix family protein; DNA binding protein, nu | 99.78 | |
| 2fml_A | 273 | MUTT/nudix family protein; structural genomics, PS | 99.77 | |
| 2fkb_A | 180 | Putative nudix hydrolase YFCD; putative protein, M | 99.69 | |
| 1q27_A | 171 | Putative nudix hydrolase DR0079; radiation resista | 99.69 | |
| 3i7u_A | 134 | AP4A hydrolase; nudix protein, diadenosine polypho | 99.68 | |
| 1sjy_A | 159 | MUTT/nudix family protein; nudix fold, alpha-beta- | 99.66 | |
| 3grn_A | 153 | MUTT related protein; structural genomics, hydrola | 99.64 | |
| 3eds_A | 153 | MUTT/nudix family protein; MUT/nudix protein, prot | 99.62 | |
| 1rya_A | 160 | GDP-mannose mannosyl hydrolase; GDP-glucose, nudix | 99.62 | |
| 3oga_A | 165 | Nucleoside triphosphatase NUDI; salmonella enteric | 99.62 | |
| 1ktg_A | 138 | Diadenosine tetraphosphate hydrolase; nudix, AMP, | 99.62 | |
| 3r03_A | 144 | Nudix hydrolase; structural genomics, PSI2, protei | 99.61 | |
| 3i9x_A | 187 | MUTT/nudix family protein; structural genomics, hy | 99.61 | |
| 2o1c_A | 150 | DATP pyrophosphohydrolase; nudix NTP hydrolase NTP | 99.6 | |
| 3u53_A | 155 | BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; | 99.6 | |
| 2pbt_A | 134 | AP4A hydrolase; nudix protein, diadenosine polypho | 99.59 | |
| 3gwy_A | 140 | Putative CTP pyrophosphohydrolase; structural geno | 99.58 | |
| 3shd_A | 153 | Phosphatase NUDJ; nudix fold, nudix motif, hydrola | 99.58 | |
| 4dyw_A | 157 | MUTT/nudix family protein; structural genomics, ni | 99.58 | |
| 3hhj_A | 158 | Mutator MUTT protein; niaid, ssgcid, decode, UW, S | 99.57 | |
| 1vcd_A | 126 | NDX1; nudix protein, diadenosine polyphosphate, AP | 99.57 | |
| 3fcm_A | 197 | Hydrolase, nudix family; protein structure initiat | 99.57 | |
| 3gg6_A | 156 | Nudix motif 18, nucleoside diphosphate-linked moie | 99.57 | |
| 1f3y_A | 165 | Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase | 99.56 | |
| 3exq_A | 161 | Nudix family hydrolase; protein structure initiati | 99.56 | |
| 2b0v_A | 153 | Nudix hydrolase; structural genomics, PSI, protein | 99.55 | |
| 3son_A | 149 | Hypothetical nudix hydrolase; structural genomics, | 99.55 | |
| 3ees_A | 153 | Probable pyrophosphohydrolase; nudix, RNA pyrophos | 99.55 | |
| 2rrk_A | 140 | ORF135, CTP pyrophosphohydrolase; NMR {Escherichia | 99.54 | |
| 2yyh_A | 139 | MUTT domain, 8-OXO-DGTPase domain; nudix family pr | 99.53 | |
| 3f6a_A | 159 | Hydrolase, nudix family; protein structure initiat | 99.53 | |
| 2w4e_A | 145 | MUTT/nudix family protein; ADP-ribose pyrophosphat | 99.52 | |
| 2azw_A | 148 | MUTT/nudix family protein; MUTT/nudix ,enterococcu | 99.52 | |
| 1v8y_A | 170 | ADP-ribose pyrophosphatase; nudix motif, loop-heli | 99.51 | |
| 1nqz_A | 194 | COA pyrophosphatase (MUTT/nudix family protein); D | 99.51 | |
| 2kdv_A | 164 | RNA pyrophosphohydrolase; nudix family, magnesium, | 99.51 | |
| 3q93_A | 176 | 7,8-dihydro-8-oxoguanine triphosphatase; structura | 99.51 | |
| 2pqv_A | 154 | MUTT/nudix family protein; structu genomics, PSI-2 | 99.5 | |
| 2fvv_A | 194 | Diphosphoinositol polyphosphate phosphohydrolase 1 | 99.5 | |
| 2b06_A | 155 | MUTT/nudix family protein; structural genomics, P | 99.5 | |
| 3h95_A | 199 | Nucleoside diphosphate-linked moiety X motif 6; NU | 99.5 | |
| 3id9_A | 171 | MUTT/nudix family protein; hydrolase, protein stru | 99.5 | |
| 2yvp_A | 182 | NDX2, MUTT/nudix family protein; nudix protein, AD | 99.48 | |
| 3q1p_A | 205 | Phosphohydrolase (MUTT/nudix family protein); asym | 99.47 | |
| 3q91_A | 218 | Uridine diphosphate glucose pyrophosphatase; struc | 99.45 | |
| 3e57_A | 211 | Uncharacterized protein TM1382; structural genomic | 99.45 | |
| 1g0s_A | 209 | Hypothetical 23.7 kDa protein in ICC-TOLC intergen | 99.44 | |
| 3o6z_A | 191 | GDP-mannose pyrophosphatase NUDK; nudix, hydrolase | 99.44 | |
| 1vk6_A | 269 | NADH pyrophosphatase; 1790429, structural genomics | 99.44 | |
| 3o8s_A | 206 | Nudix hydrolase, ADP-ribose pyrophosphatase; struc | 99.44 | |
| 3fk9_A | 188 | Mutator MUTT protein; structural genomics, hydrola | 99.44 | |
| 3cng_A | 189 | Nudix hydrolase; structural genomics, APC7497, PSI | 99.43 | |
| 1vhz_A | 198 | ADP compounds hydrolase NUDE; structural genomics; | 99.43 | |
| 2qjt_B | 352 | Nicotinamide-nucleotide adenylyltransferase; two i | 99.42 | |
| 1mut_A | 129 | MUTT, nucleoside triphosphate pyrophosphohydrolase | 99.42 | |
| 1mk1_A | 207 | ADPR pyrophosphatase; nudix hydrolase, adprase, ad | 99.42 | |
| 2jvb_A | 146 | Protein PSU1, mRNA-decapping enzyme subunit 2; DCP | 99.41 | |
| 2qjo_A | 341 | Bifunctional NMN adenylyltransferase/nudix hydrol; | 99.4 | |
| 1k2e_A | 156 | Nudix homolog; nudix/MUTT-like fold, mixed alpha/b | 99.38 | |
| 3f13_A | 163 | Putative nudix hydrolase family member; structural | 99.37 | |
| 1x51_A | 155 | A/G-specific adenine DNA glycosylase; nudix domain | 99.33 | |
| 2a6t_A | 271 | SPAC19A8.12; alpha/beta/alpha, RNA binding protein | 99.32 | |
| 2dsc_A | 212 | ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP | 99.27 | |
| 3fjy_A | 364 | Probable MUTT1 protein; dimer, protein structure i | 99.2 | |
| 1u20_A | 212 | U8 snoRNA-binding protein X29; modified nudix hydr | 99.17 | |
| 1q33_A | 292 | Pyrophosphatase, ADP-ribose pyrophosphatase; nudix | 99.16 | |
| 3qsj_A | 232 | Nudix hydrolase; structural genomics, PSI-biology, | 99.14 | |
| 3fsp_A | 369 | A/G-specific adenine glycosylase; protein-DNA comp | 99.09 | |
| 2xsq_A | 217 | U8 snoRNA-decapping enzyme; hydrolase, mRNA decapp | 98.87 | |
| 3rh7_A | 321 | Hypothetical oxidoreductase; FMN-binding split bar | 98.49 | |
| 3kvh_A | 214 | Protein syndesmos; NUDT16-like, NUDT16L1, nudix, R | 98.44 | |
| 3bho_A | 208 | Cleavage and polyadenylation specificity factor su | 98.14 |
| >3fvy_A Dipeptidyl-peptidase 3; SGC, DPP3, alternative splicing, aminopeptidase, cytoplasm, hydrolase, metal-binding, metalloprotease, phosphoprotein; 1.90A {Homo sapiens} PDB: 3t6b_A 3t6j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-138 Score=1190.23 Aligned_cols=553 Identities=18% Similarity=0.224 Sum_probs=471.5
Q ss_pred hhccccchhhcCCCHHHHHHHHHHHHHhhhccceeeeccCCCCHHHHHHHHhhhcc---cchhHH--------------H
Q 004451 183 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADA---SELDKL--------------K 245 (753)
Q Consensus 183 ~~pv~~~~~f~~Lt~~Ek~yl~~l~~Aa~~g~~I~~~Q~s~e~~~i~~~l~~~~~~---~~~~~~--------------~ 245 (753)
...+.|+..|+.||++||+|+||||||||+|++|+++|+||||+.||++|+.+|.. ++|+.+ .
T Consensus 16 i~~L~~~~~F~~Lt~keK~Yah~ls~Aa~~G~~I~l~Q~s~es~~I~~ll~~i~~~~~~~~~~~~~~~~~~~~~e~~~fl 95 (728)
T 3fvy_A 16 VSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIYALLSRLFRAQDPDQLHQHALAEGLTEEEYQAFL 95 (728)
T ss_dssp EEECCCHHHHHTSCHHHHHHHHHHHHHHHHHHTHHHHTTCSSHHHHHHHHHHHHHHSCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eEEEehHHhHhhCCHHHHHHHHHHHHHHHcCCCEEEEeCCcccHHHHHHHHHHHHhCCchhHHHHHHhcCCCHHHHHHHH
Confidence 34577899999999999999999999999999999999999999999999999941 144432 1
Q ss_pred --HHHhhccCCC---CCC----CCCCHHHHHHHHhhcccCCCCCCCccccccccccccCCCC-------CC-CC-CccCC
Q 004451 246 --WMYYLINKSP---WSS----LDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLP-------KP-PG-ANFYP 307 (753)
Q Consensus 246 --~~~~~~n~g~---~~~----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-------~~-~g-s~yYp 307 (753)
...|+.|.|| |++ |++++++|.++++++++.....+.+..+|+.+++.||++. .| .| |||||
T Consensus 96 ~Y~~~f~~n~Gny~~fGd~KfiP~~s~~~f~~l~~~s~~~~~~~~~~~~l~~~~~~~if~~~~~~~~lg~~~~g~s~YY~ 175 (728)
T 3fvy_A 96 VYAAGVYSNMGNYKSFGDTKFVPNLPKEKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFS 175 (728)
T ss_dssp HHHHHHHHHTSSBCTTTCBBCCCSSCHHHHHHHHHHSHHHHHSHHHHHHHHHHHHHHHHCCCGGGSBBCSGGGCBCSSBC
T ss_pred HHHHHHHhccCCccCCCCCCcCCCCCHHHHHHHHHhCchhhccchhHHHHHHHhhHHhccCCcccccCCCCCCCccCCCC
Confidence 1123334454 444 9999999999997664322112245678889999999942 33 24 99999
Q ss_pred CCCCHHHHHHHHhhhchhhhhcccccceeEeecC--CCc-----ccCCCcCCcccCC---CC---ccccCCcEEEEeecc
Q 004451 308 PDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS--EFN-----LDSSLSGHIVDAT---NH---SVGSIYDLYSVPYSE 374 (753)
Q Consensus 308 ~~it~~e~~~~~~~~~~~~~~~~~~~~t~~~k~~--~~~-----~~~~~~~~~~~~~---~~---~~~~~g~~~~~~y~g 374 (753)
++||++|+++++++| +++++.++||||+|.. ++. ++||+.+...... .. ....+|..+.+.| |
T Consensus 176 ~~iT~~eie~v~~~~---~~~~i~~~NTRl~K~~~~~g~~~~~i~~AS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 251 (728)
T 3fvy_A 176 GNCTMEDAKLAQDFL---DSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFRGSPFQVTR-G 251 (728)
T ss_dssp TTCCHHHHHHHHHHH---HHTTCCSTTEEEEEEECTTCCEEEEEEEECSSCCC----CTTGGGCSEEEETTEEEEEEE-E
T ss_pred CCCCHHHHHHHHHHH---HhCCCchhcceEEEEecCCCcceEEEEEEeecccCCccccccccccccccccCceeeecC-C
Confidence 999999999999999 6788999999999983 331 5677653221100 00 1113477788888 9
Q ss_pred ccHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHcccCc---cchhcHhhhcc-CCeeeeeecccccccccccCccccc
Q 004451 375 EYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATF 450 (753)
Q Consensus 375 ~y~~~l~~v~~~L~~A~~~a~n~~q~~~L~~~~~~f~tg~---~~~s~~~Wv~d-~~~ve~~iGfiE~Y~Dp~~g~ra~~ 450 (753)
||+++|++||.+|++|++||+|++|++||.+||+||+||| |++||++||+| +|+||++||||||||||+ |+||||
T Consensus 252 dy~~~l~ki~~~L~kA~~~A~N~~qk~~L~~yi~~F~TGdl~~~k~s~~~WvkD~~p~VE~~iGFIEtYrDP~-G~Rae~ 330 (728)
T 3fvy_A 252 DYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFWIQDKGPIVESYIGFIESYRDPF-GSRGEF 330 (728)
T ss_dssp ETHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSCSCSEEEEEEEEECSSSTT-SCSCEE
T ss_pred chHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCceeeeecCceecCCCC-CCceeE
Confidence 9999999999999999999999999999999999999996 58899999999 999999999999999996 999999
Q ss_pred eeeEEeeCHHHHHHHHHHhhcHHHHHHhCCCCcccccCCCCCCCcceeeeeeccCCCCCCcceeecCCCchHHHhhccce
Q 004451 451 EAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTS 530 (753)
Q Consensus 451 E~~V~i~d~~~s~~~~~l~~~a~~~~~~lPw~~~~ek~~~~~pd~~~~~vl~~~g~~~~~~~~giNlPN~~~ir~~~G~K 530 (753)
||||+|+|+++|+||++|+++||+|+++|||+++|||++|.+||||||+||+||||+ +|||||||||||||+++|||
T Consensus 331 EgfVai~d~e~T~kl~~lv~~a~~~~~~LPw~~~feKd~f~~pdftsl~vl~~aGsg---~p~GINLPNyd~IR~~~GfK 407 (728)
T 3fvy_A 331 EGFVAVVNKAMSAKFERLVASAEQLLKELPWPPTFEKDKFLTPDFTSLDVLTFAGSG---IPAGINIPNYDDLRQTEGFK 407 (728)
T ss_dssp EEEEEECCHHHHHHHHHHHHTHHHHHHTSSSCGGGSCSSCCCCCCCEEEEEEEESSC---CCSEEEECCCHHHHHHTCCE
T ss_pred EEEEEEeCHHHHHHHHHHHHHHHHHHHhCCCCchhccCccCCCCceEEEeHhhcCCC---CccceeCCChHHHHHhcCee
Confidence 999999999999999999999999999999999999999999999999999999998 59999999999999999999
Q ss_pred eEEecchhhhhhccccccccccccCHhhHhhhccc---ccchhhhhhhc-ccCcCCCCcccCC---------------c-
Q 004451 531 MVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFD---SFFTHNICHEC-CHGIGPHSITLPD---------------G- 590 (753)
Q Consensus 531 nv~l~Nv~~a~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~v~lHEl-gHgsGk~~~~~~~---------------g- 590 (753)
||+|+|||+|++.....++ .||+++|++++.+| +|++||+|||| ||||||++...++ |
T Consensus 408 nVsLgNvl~A~~~~~~~~i--~fi~~~~~~l~~k~~~~af~~~v~lHElLGHGsGkll~~~~~G~~NFD~~~~~~p~tg~ 485 (728)
T 3fvy_A 408 NVSLGNVLAVAYATQREKL--TFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPETGE 485 (728)
T ss_dssp EEEEHHHHTTSSCCSGGGC--TTBCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCBBCTTSCBSSCTTTCBCTTTSS
T ss_pred EEEeeeehhhhhcccccCC--CccCHHHHHHHHHhccchHhHHHHHHHhccCcCCcccccCCCCccccccccCCCCCCCC
Confidence 9999999999864322222 59999999999876 99999999999 9999997652211 1
Q ss_pred -------ccccccchhhcccchHHhHHHHHHHHHHH--HHHHh-CCCCCchhhhHHHHHHHHH---HHhhhccC------
Q 004451 591 -------RQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIG-RDLLPKSLVKSMYVSFLAG---CFRSVRFG------ 651 (753)
Q Consensus 591 -------~~~t~~~~f~~~~s~~EEcRAe~vglyl~--~~ll~-~g~~~~~~~~~~y~~~l~~---~~~~l~f~------ 651 (753)
+|+||+++||+++||+||||||||||||| ++|++ ||+.+.++++++|++||+| ++++|+|+
T Consensus 486 ~i~swY~pgeT~~s~fg~~ast~EEcRAdlvgLYl~~~~~lleifG~~~~~a~d~~Y~~~L~~~~~Gl~~l~f~~p~~~~ 565 (728)
T 3fvy_A 486 QIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAGLLALEFYTPEAFN 565 (728)
T ss_dssp BCCCCBCTTCCHHHHSTTTHHHHHHHHHHHHHHHHTTCHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHGGGGEEGGGTE
T ss_pred cceeeccCCCcHHHHHhcccchHHHHHHHHHHHHHcCCHHHHHHcCCCccchhhhHHHHHHHHHHHhhheeeeecCCCCc
Confidence 58999999999999999999999999999 77999 6998667899999999986 55788883
Q ss_pred ccchhHhHHHHHHHHHhhcCC-eE---Ec--cC----CcEEEeHhhHH----HHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 004451 652 LEESHGKGQALQFNWLFEKEA-FI---LH--SD----DTFSVDFDKVE----GAVESLSTEILTIQARGDKEAASLLLQK 717 (753)
Q Consensus 652 ~~qaH~~ar~~i~~~~~~~g~-~~---~~--~~----g~~~vD~~ki~----~av~~ll~~l~~~ks~gD~~a~~~~~e~ 717 (753)
|+||||||||+|+|||+++|. ++ .+ ++ ++++|||+||+ +||++||++||+||||||+++|++||++
T Consensus 566 w~qAH~qar~~il~~lle~G~~~v~~~~~~~~~g~~~~~i~vD~sKi~~~g~~avg~lL~~l~~~KstgD~~aa~~l~e~ 645 (728)
T 3fvy_A 566 WRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEG 645 (728)
T ss_dssp ESCHHHHHHHHHHHHHHHTCTTSEEEEEEECTTSSEEEEEEECGGGTTTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHcCCCeEEEEEecccCCCCcEEEEeeHHHHhhhhHHHHHHHHHHHHeeeecCCHHHHHHHHHh
Confidence 999999999999999999996 43 22 13 35789999994 6999999999999999999999999999
Q ss_pred hcCCCHH-------HH-HHHHhhhccCCCCccccccccccccc
Q 004451 718 YCTMTQP-------LK-VALQKLENVQVPVDIAPTFTAVNKLL 752 (753)
Q Consensus 718 ~~~v~~~-------~~-~~l~r~~~~~~p~~i~~~f~~~~~~~ 752 (753)
|++|+++ |+ +||+|++ | |++|||+||+|
T Consensus 646 y~~v~~~~~~~~~~~r~iVl~rk~----P---rk~FVQ~nt~l 681 (728)
T 3fvy_A 646 YATVTDAPPECFLTLRDTVLLRKE----S---RKLIVQPNTRL 681 (728)
T ss_dssp HTCCCCCTTTCHHHHHHHHHHTCC----C---CCEEECCEEEE
T ss_pred ccccCcccchhHHHHHHHHHhccC----C---CceeecCcEEE
Confidence 9998864 77 7999887 8 89999999987
|
| >3csk_A Probable dipeptidyl-peptidase 3; Zn-hydrolase, aminodipeptidase, hexxgh-motif, aminopeptidase hydrolase, metal-binding, metalloprotease; 1.95A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170} | Back alignment and structure |
|---|
| >2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A* | Back alignment and structure |
|---|
| >2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens} | Back alignment and structure |
|---|
| >2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6 | Back alignment and structure |
|---|
| >1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A* | Back alignment and structure |
|---|
| >3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A* | Back alignment and structure |
|---|
| >2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6 | Back alignment and structure |
|---|
| >2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2 | Back alignment and structure |
|---|
| >1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A | Back alignment and structure |
|---|
| >3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A* | Back alignment and structure |
|---|
| >1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A* | Back alignment and structure |
|---|
| >3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A* | Back alignment and structure |
|---|
| >3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A | Back alignment and structure |
|---|
| >1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A* | Back alignment and structure |
|---|
| >3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0 | Back alignment and structure |
|---|
| >3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua} | Back alignment and structure |
|---|
| >2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A | Back alignment and structure |
|---|
| >3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A* | Back alignment and structure |
|---|
| >3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0 | Back alignment and structure |
|---|
| >3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A | Back alignment and structure |
|---|
| >4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
| >3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae} | Back alignment and structure |
|---|
| >1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A* | Back alignment and structure |
|---|
| >3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124} | Back alignment and structure |
|---|
| >3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A* | Back alignment and structure |
|---|
| >3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367} | Back alignment and structure |
|---|
| >2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1 | Back alignment and structure |
|---|
| >3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes} | Back alignment and structure |
|---|
| >3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A* | Back alignment and structure |
|---|
| >2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli} | Back alignment and structure |
|---|
| >2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124} | Back alignment and structure |
|---|
| >2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1 | Back alignment and structure |
|---|
| >1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A | Back alignment and structure |
|---|
| >1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A | Back alignment and structure |
|---|
| >2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A | Back alignment and structure |
|---|
| >3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A | Back alignment and structure |
|---|
| >2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A* | Back alignment and structure |
|---|
| >2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1 | Back alignment and structure |
|---|
| >3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str} | Back alignment and structure |
|---|
| >2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A* | Back alignment and structure |
|---|
| >3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A | Back alignment and structure |
|---|
| >3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A | Back alignment and structure |
|---|
| >3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A | Back alignment and structure |
|---|
| >1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A | Back alignment and structure |
|---|
| >3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis} | Back alignment and structure |
|---|
| >3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans} | Back alignment and structure |
|---|
| >3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718} | Back alignment and structure |
|---|
| >1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A* | Back alignment and structure |
|---|
| >2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B | Back alignment and structure |
|---|
| >1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A* | Back alignment and structure |
|---|
| >1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A* | Back alignment and structure |
|---|
| >2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP} | Back alignment and structure |
|---|
| >1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A | Back alignment and structure |
|---|
| >3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum} | Back alignment and structure |
|---|
| >1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3 | Back alignment and structure |
|---|
| >2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B* | Back alignment and structure |
|---|
| >2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A* | Back alignment and structure |
|---|
| >3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID} | Back alignment and structure |
|---|
| >1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A* | Back alignment and structure |
|---|
| >1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A* | Back alignment and structure |
|---|
| >3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A* | Back alignment and structure |
|---|
| >2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A | Back alignment and structure |
|---|
| >3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 753 | ||||
| d1hzta_ | 153 | d.113.1.2 (A:) Isopentenyl diphosphate isomerase { | 1e-17 | |
| d2fkba1 | 161 | d.113.1.2 (A:8-168) Hypothetical protein YfcD {Esc | 4e-15 | |
| d2o5fa1 | 162 | d.113.1.2 (A:7-168) Hypothetical protein DR0079 {D | 6e-15 | |
| d1sjya_ | 158 | d.113.1.1 (A:) Hypothetical protein DR1025 {Deinoc | 6e-09 | |
| d1u20a1 | 196 | d.113.1.1 (A:14-209) U8 snorna-binding protein x29 | 2e-08 | |
| d2a6ta2 | 151 | d.113.1.7 (A:95-245) mRNA decapping enzyme Dcp2p c | 5e-08 | |
| d2azwa1 | 147 | d.113.1.1 (A:2-148) Hypothetical protein EF1141 {E | 6e-07 | |
| d1ryaa_ | 160 | d.113.1.5 (A:) GDP-mannose mannosyl hydrolase NudD | 2e-06 | |
| d2b06a1 | 155 | d.113.1.1 (A:1-155) Hypothetical protein SP1235 (s | 8e-06 | |
| d2fvva1 | 135 | d.113.1.1 (A:8-142) Diphosphoinositol polyphosphat | 1e-05 | |
| d1xsba_ | 153 | d.113.1.1 (A:) Diadenosine tetraphosphate hydrolas | 2e-05 | |
| d1irya_ | 156 | d.113.1.1 (A:) 7,8-dihydro-8-oxoguanine triphospha | 3e-04 | |
| d1k2ea_ | 152 | d.113.1.1 (A:) Hypothetical protein PAE3301 {Archa | 5e-04 | |
| d2b0va1 | 146 | d.113.1.1 (A:4-149) Hypothetical protein NE0184 {N | 6e-04 | |
| d1nqza_ | 187 | d.113.1.1 (A:) Coenzyme A pyrophosphatase {Deinoco | 0.002 | |
| d2fmla2 | 202 | d.113.1.6 (A:3-204) Hypothetical protein EF2700, N | 0.002 | |
| d1vcda1 | 126 | d.113.1.1 (A:1-126) AP6A hydrolase Ndx1 {Thermus t | 0.003 |
| >d1hzta_ d.113.1.2 (A:) Isopentenyl diphosphate isomerase {Escherichia coli [TaxId: 562]} Length = 153 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nudix superfamily: Nudix family: IPP isomerase-like domain: Isopentenyl diphosphate isomerase species: Escherichia coli [TaxId: 562]
Score = 78.4 bits (192), Expect = 1e-17
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 8/138 (5%)
Query: 11 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI 70
H ++W+F + +LL+ RRA K +WPG+W S GH G+S+ + R + ELG+
Sbjct: 2 HLAFSSWLF-NAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGV 60
Query: 71 NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIA 130
E ++ + + + NE V+ T + + + EV ++
Sbjct: 61 --EITPPESIYPDFRYRATDPSGIVENEVCPVFAARTTSAL-----QINDDEVMDYQWCD 113
Query: 131 YEEYKNLLAKDDPSFVPY 148
+ + + +F P+
Sbjct: 114 LADVLHGIDATPWAFSPW 131
|
| >d2fkba1 d.113.1.2 (A:8-168) Hypothetical protein YfcD {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
| >d2o5fa1 d.113.1.2 (A:7-168) Hypothetical protein DR0079 {Deinococcus radiodurans str. R1 (Deinococcus radiodurans R1) [TaxId: 243230]} Length = 162 | Back information, alignment and structure |
|---|
| >d1sjya_ d.113.1.1 (A:) Hypothetical protein DR1025 {Deinococcus radiodurans [TaxId: 1299]} Length = 158 | Back information, alignment and structure |
|---|
| >d1u20a1 d.113.1.1 (A:14-209) U8 snorna-binding protein x29 {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 196 | Back information, alignment and structure |
|---|
| >d2a6ta2 d.113.1.7 (A:95-245) mRNA decapping enzyme Dcp2p catalytic domain {Schizosaccharomyces pombe [TaxId: 4896]} Length = 151 | Back information, alignment and structure |
|---|
| >d2azwa1 d.113.1.1 (A:2-148) Hypothetical protein EF1141 {Enterococcus faecalis [TaxId: 1351]} Length = 147 | Back information, alignment and structure |
|---|
| >d1ryaa_ d.113.1.5 (A:) GDP-mannose mannosyl hydrolase NudD {Escherichia coli [TaxId: 562]} Length = 160 | Back information, alignment and structure |
|---|
| >d2b06a1 d.113.1.1 (A:1-155) Hypothetical protein SP1235 (spr1115) {Streptococcus pneumoniae [TaxId: 1313]} Length = 155 | Back information, alignment and structure |
|---|
| >d2fvva1 d.113.1.1 (A:8-142) Diphosphoinositol polyphosphate phosphohydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 135 | Back information, alignment and structure |
|---|
| >d1xsba_ d.113.1.1 (A:) Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Length = 153 | Back information, alignment and structure |
|---|
| >d1irya_ d.113.1.1 (A:) 7,8-dihydro-8-oxoguanine triphosphatase Hmth1 {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
| >d1k2ea_ d.113.1.1 (A:) Hypothetical protein PAE3301 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 152 | Back information, alignment and structure |
|---|
| >d2b0va1 d.113.1.1 (A:4-149) Hypothetical protein NE0184 {Nitrosomonas europaea [TaxId: 915]} Length = 146 | Back information, alignment and structure |
|---|
| >d1nqza_ d.113.1.1 (A:) Coenzyme A pyrophosphatase {Deinococcus radiodurans [TaxId: 1299]} Length = 187 | Back information, alignment and structure |
|---|
| >d2fmla2 d.113.1.6 (A:3-204) Hypothetical protein EF2700, N-terminal domain {Enterococcus faecalis [TaxId: 1351]} Length = 202 | Back information, alignment and structure |
|---|
| >d1vcda1 d.113.1.1 (A:1-126) AP6A hydrolase Ndx1 {Thermus thermophilus [TaxId: 274]} Length = 126 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 753 | |||
| d1hzta_ | 153 | Isopentenyl diphosphate isomerase {Escherichia col | 99.87 | |
| d2o5fa1 | 162 | Hypothetical protein DR0079 {Deinococcus radiodura | 99.83 | |
| d2fkba1 | 161 | Hypothetical protein YfcD {Escherichia coli [TaxId | 99.83 | |
| d2fb1a2 | 147 | Hypothetical protein BT0354, N-terminal domain {Ba | 99.78 | |
| d1ryaa_ | 160 | GDP-mannose mannosyl hydrolase NudD {Escherichia c | 99.72 | |
| d2fmla2 | 202 | Hypothetical protein EF2700, N-terminal domain {En | 99.71 | |
| d1sjya_ | 158 | Hypothetical protein DR1025 {Deinococcus radiodura | 99.67 | |
| d2b0va1 | 146 | Hypothetical protein NE0184 {Nitrosomonas europaea | 99.66 | |
| d1vcda1 | 126 | AP6A hydrolase Ndx1 {Thermus thermophilus [TaxId: | 99.65 | |
| d1jkna_ | 165 | Diadenosine tetraphosphate hydrolase (Ap4A hydrola | 99.65 | |
| d1vk6a2 | 131 | NADH pyrophosphatase {Escherichia coli [TaxId: 562 | 99.63 | |
| d2b06a1 | 155 | Hypothetical protein SP1235 (spr1115) {Streptococc | 99.63 | |
| d1ktga_ | 137 | Diadenosine tetraphosphate hydrolase (Ap4A hydrola | 99.57 | |
| d1puna_ | 129 | Nucleoside triphosphate pyrophosphorylase (MutT) { | 99.57 | |
| d1irya_ | 156 | 7,8-dihydro-8-oxoguanine triphosphatase Hmth1 {Hum | 99.56 | |
| d2a6ta2 | 151 | mRNA decapping enzyme Dcp2p catalytic domain {Schi | 99.54 | |
| d2fvva1 | 135 | Diphosphoinositol polyphosphate phosphohydrolase { | 99.54 | |
| d2azwa1 | 147 | Hypothetical protein EF1141 {Enterococcus faecalis | 99.52 | |
| d1nqza_ | 187 | Coenzyme A pyrophosphatase {Deinococcus radioduran | 99.48 | |
| d1v8ya_ | 158 | ADP-ribose pyrophosphatase {Thermus thermophilus [ | 99.48 | |
| d1xsba_ | 153 | Diadenosine tetraphosphate hydrolase (Ap4A hydrola | 99.47 | |
| d1k2ea_ | 152 | Hypothetical protein PAE3301 {Archaeon Pyrobaculum | 99.4 | |
| d1mqea_ | 202 | ADP-ribose pyrophosphatase {Mycobacterium tubercul | 99.29 | |
| d1vhza_ | 186 | ADP compounds hydrolase NudE {Escherichia coli [Ta | 99.27 | |
| d1rrqa2 | 127 | Adenine glycosylase MutY, C-terminal domain {Bacil | 99.24 | |
| d1g0sa_ | 209 | ADP-ribose pyrophosphatase {Escherichia coli [TaxI | 99.24 | |
| d1q33a_ | 292 | NUDT9 (mitochondrial ADP-ribose pyrophosphatase) { | 99.09 | |
| d1viua_ | 189 | ADP-ribose pyrophosphatase homologue YffH {Escheri | 99.08 | |
| d1u20a1 | 196 | U8 snorna-binding protein x29 {African clawed frog | 99.0 | |
| d1x51a1 | 142 | A/G-specific adenine DNA glycosylase {Human (Homo | 98.87 | |
| d2ovxa1 | 159 | Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: | 81.21 |
| >d1hzta_ d.113.1.2 (A:) Isopentenyl diphosphate isomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nudix superfamily: Nudix family: IPP isomerase-like domain: Isopentenyl diphosphate isomerase species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=3.3e-22 Score=191.00 Aligned_cols=130 Identities=26% Similarity=0.506 Sum_probs=103.6
Q ss_pred ceEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeecccccCCCCCCHHHHHHHHHHHHHCCccCCCceEEEE-EEEeeee
Q 004451 10 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVF-TFLQQNV 88 (753)
Q Consensus 10 ~h~aV~v~V~~~~~g~VLL~kRs~~k~~~pG~W~lP~GG~Ve~gEs~~~AA~REl~EEtGl~v~~~~L~~l~-~~~~~~~ 88 (753)
+|++|+|+|+| ++|+|||+||+..|..+||.|++++||++++|||+.+||+||+.||||+++... ..+. .+.|...
T Consensus 1 lHra~~v~i~n-~~g~vLl~kRs~~k~~~pg~w~~~pgG~ve~gEt~~eaa~RE~~EE~Gi~~~~~--~~~~~~~~y~~~ 77 (153)
T d1hzta_ 1 LHLAFSSWLFN-AKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPP--ESIYPDFRYRAT 77 (153)
T ss_dssp CEECEEEEEEC-TTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCC--EEEETTCEEEEE
T ss_pred CceEEEEEEEE-CCCEEEEEEeCCCCCCCCCceecccCceeecCCcHHHHHHHHHHHHcCceeecc--cceecccccccc
Confidence 59999999999 789999999998888999999995599999999999999999999999996543 2222 2333333
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCCcCccCCccceeeEEEeCHHHHHhHHhcCCCCcccC
Q 004451 89 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 148 (753)
Q Consensus 89 ~~~g~~~~~~i~~vy~a~~~~~~~~~~~~~~~~Ev~e~~Wvs~~El~~l~~~~~~~~~pw 148 (753)
.+++ ...+.+.++|.+..+. .+.++++|+++++|++++||.+.+..+|..|+||
T Consensus 78 ~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~Ev~~~~W~~~~el~~~i~~~p~~~tpW 131 (153)
T d1hzta_ 78 DPSG-IVENEVCPVFAARTTS-----ALQINDDEVMDYQWCDLADVLHGIDATPWAFSPW 131 (153)
T ss_dssp CTTS-CEEEEECCEEEEEBCS-----CCCCCTTTEEEEEEECHHHHHHHHHHCGGGBCHH
T ss_pred cccc-ccceeEEEEEEEeeCC-----CccCChhheeEEEEeeHHHHHHHHHcCCcccCHH
Confidence 3332 2345566677665433 2467778999999999999999999999999999
|
| >d2o5fa1 d.113.1.2 (A:7-168) Hypothetical protein DR0079 {Deinococcus radiodurans str. R1 (Deinococcus radiodurans R1) [TaxId: 243230]} | Back information, alignment and structure |
|---|
| >d2fkba1 d.113.1.2 (A:8-168) Hypothetical protein YfcD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fb1a2 d.113.1.6 (A:3-149) Hypothetical protein BT0354, N-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1ryaa_ d.113.1.5 (A:) GDP-mannose mannosyl hydrolase NudD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fmla2 d.113.1.6 (A:3-204) Hypothetical protein EF2700, N-terminal domain {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1sjya_ d.113.1.1 (A:) Hypothetical protein DR1025 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d2b0va1 d.113.1.1 (A:4-149) Hypothetical protein NE0184 {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
| >d1vcda1 d.113.1.1 (A:1-126) AP6A hydrolase Ndx1 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1jkna_ d.113.1.1 (A:) Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) {Narrow-leaved blue lupine (Lupinus angustifolius) [TaxId: 3871]} | Back information, alignment and structure |
|---|
| >d1vk6a2 d.113.1.4 (A:126-256) NADH pyrophosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2b06a1 d.113.1.1 (A:1-155) Hypothetical protein SP1235 (spr1115) {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1ktga_ d.113.1.1 (A:) Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1puna_ d.113.1.1 (A:) Nucleoside triphosphate pyrophosphorylase (MutT) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1irya_ d.113.1.1 (A:) 7,8-dihydro-8-oxoguanine triphosphatase Hmth1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2a6ta2 d.113.1.7 (A:95-245) mRNA decapping enzyme Dcp2p catalytic domain {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d2fvva1 d.113.1.1 (A:8-142) Diphosphoinositol polyphosphate phosphohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2azwa1 d.113.1.1 (A:2-148) Hypothetical protein EF1141 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1nqza_ d.113.1.1 (A:) Coenzyme A pyrophosphatase {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1v8ya_ d.113.1.1 (A:) ADP-ribose pyrophosphatase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1xsba_ d.113.1.1 (A:) Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1k2ea_ d.113.1.1 (A:) Hypothetical protein PAE3301 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1mqea_ d.113.1.1 (A:) ADP-ribose pyrophosphatase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1vhza_ d.113.1.1 (A:) ADP compounds hydrolase NudE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1rrqa2 d.113.1.3 (A:234-360) Adenine glycosylase MutY, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1g0sa_ d.113.1.1 (A:) ADP-ribose pyrophosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1q33a_ d.113.1.1 (A:) NUDT9 (mitochondrial ADP-ribose pyrophosphatase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1viua_ d.113.1.1 (A:) ADP-ribose pyrophosphatase homologue YffH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1u20a1 d.113.1.1 (A:14-209) U8 snorna-binding protein x29 {African clawed frog (Xenopus laevis) [TaxId: 8355]} | Back information, alignment and structure |
|---|
| >d1x51a1 d.113.1.3 (A:8-149) A/G-specific adenine DNA glycosylase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ovxa1 d.92.1.11 (A:110-443) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|