Citrus Sinensis ID: 004509

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------75

MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLSLPSFSGLKSTSSSTLRTPTSRRRLSTSQASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

cccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccccEEEccccHHHHHHHHHHHHccccccHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccHHccccHHHHHHHHHcccccEEEEcccccccccccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccEEEEccccccccccccHHHcccccEEEEcccccccccEEEEEcccHHHHHHHHHHHHHHccccEEEEccccHHHHHHHcHHHHHcccccccccEEEEEccccccccccccccccEEEEccccccccHHHHHHHccccHHHHHHHHHHHc

ccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccEEEEHccHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEccHHHHHHHHHHHHHHccccccHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcEccEccccccEEEEEcHHHHHcHHHHHHHHHHHHHccccEEEEEEEccEEccEEHHHcccccHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHccccccHHHHHHHHHHHccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccHHHHccccccccccEcHHHHHHHHHHHHHHHcccEEEEEcccHHHHccccccccEcccccccccEccccccHHHHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHHHHHccccEEEEEcccHHHcccccccccccHHHHHHcccccEEEccccHHHHHHHHHHHHHcccccEEEEEccccEcccccccHHHHHcccEEEEEccccccccEEEEEcHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHccHHHHHHHcccccccEEEEccccccccHHHHccccEEEccccccccccHHHHHHHccccHHHHHHHHcccc

MASSSSFTLSQALLTrgtshhgftqssehhrlalstlslpsfsglkstssstlrtptsrrrlstsqASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVekansghpglpmgcapmghilydevmrynpknpywfnrdRFVLSAGHGCMLQYALLHLagydsvqeddlknfrqwgsktpghpenfetpgievttgplgqGMANAVGLALAEKHLAArynkpdneivdhYTYVIlgdgcqmegIANEASSLAGHLGLGKLIafyddnhisidgdteiafTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAkavtdkptlirvtttigfgspnkansysvhgsalgakevdatrknlgwpyepfhvpedvkkHWSRHVAEGATLEAEWNAKFAEYEKKypeeaaefksissgqlpagwekalptytpespaeaTRNLSQTCLNALAKTlpgllggsadlaSSNMTLLKMFGdfqkdtpeernvrfgvrehgmgAICNgialhspglipycatfFVFTDYMRAAIRISALCEAGVIYVMthdsiglgedgpthqpiehlasframpnilmlrpadgnetaGAYKVAVANRKRPSILALSRqklphlagtsidgvekgayiisdnssgnkpdvilIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIeagstfgwekivgskgkaigidrfgasapagkiykeFGITAEAVITAAKEVC

MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLSlpsfsglkstssstlrtptsrrrlstsqaslPIRAAAVETLETstdaalveksVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSktpghpenfetpgIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKeakavtdkptliRVTTtigfgspnkaNSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEfksissgqlpagWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFgdfqkdtpeERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSilalsrqklphlagtsidgveKGAYIisdnssgnkpDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVsieagstfgwekivgSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLslpsfsglkstssstlrtptsrrrlstsQASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNakfaeyekkypeeaaefkSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSeleiaakaaeelRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

******************************************************************************L**STDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQW***************IEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYE******************************************QTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQ******RNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISD******PDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITA*****

*****************************************************************************************KSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

*********SQALLTRG*************RLALSTLSLPSF************************ASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

********************************************************************LPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		748	2.2.26 [Sep-21-2011]
F4IW47		741	Transketolase-2, chloropl	yes	no	0.985	0.994	0.825	0.0
Q8RWV0		741	Transketolase-1, chloropl	no	no	0.982	0.991	0.820	0.0
Q43848		741	Transketolase, chloroplas	N/A	no	0.982	0.991	0.824	0.0
Q7SIC9		675	Transketolase, chloroplas	N/A	no	0.897	0.994	0.866	0.0
O20250		741	Transketolase, chloroplas	N/A	no	0.947	0.956	0.831	0.0
Q42677		676	Transketolase 7 OS=Crater	N/A	no	0.885	0.979	0.774	0.0
Q42675		679	Transketolase 10 OS=Crate	N/A	no	0.885	0.974	0.778	0.0
Q42676		519	Transketolase, chloroplas	N/A	no	0.692	0.998	0.872	0.0
Q8YRU9		670	Transketolase OS=Nostoc s	yes	no	0.882	0.985	0.653	0.0
Q9KAD7		666	Transketolase OS=Bacillus	yes	no	0.870	0.977	0.546	0.0

>sp\|F4IW47\|TKTC2_ARATH Transketolase-2, chloroplastic OS=Arabidopsis thaliana GN=TKL-2 PE=1 SV=1	Back alignment and function desciption

 Score = 1288 bits (3332), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/750 (82%), Positives = 674/750 (89%), Gaps = 13/750 (1%)

Query: 1   MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLSLPSFSGLKSTSSSTLRTPTSRR 60
           MAS+SS  LSQALLTR  SH+G    SE+       +S+P+FS LKSTS  T  T +SRR
Sbjct: 1   MASTSSLALSQALLTRAISHNG----SEN------CVSIPAFSALKSTSPRTSGTISSRR 50

Query: 61  R-LSTSQASLP--IRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGC 117
           R  ST   SL   +RAAAVE + TS+D++LV+KSVNTIRFLA+DAVEKA SGHPGLPMGC
Sbjct: 51  RNASTISHSLRPLVRAAAVEAIVTSSDSSLVDKSVNTIRFLAIDAVEKAKSGHPGLPMGC 110

Query: 118 APMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQ 177
           APM HILYDEVM+YNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV+E+DLK+FRQ
Sbjct: 111 APMSHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVREEDLKSFRQ 170

Query: 178 WGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVI 237
           WGSKTPGHPENFETPG+E TTGPLGQG+ANAVGLALAEKHLAAR+NKPDNEIVDHYTY I
Sbjct: 171 WGSKTPGHPENFETPGVEATTGPLGQGIANAVGLALAEKHLAARFNKPDNEIVDHYTYSI 230

Query: 238 LGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHV 297
           LGDGCQMEGI+NE  SLAGH GLGKLIAFYDDNHISIDGDT+IAFTE+VDKRFE LGWHV
Sbjct: 231 LGDGCQMEGISNEVCSLAGHWGLGKLIAFYDDNHISIDGDTDIAFTESVDKRFEALGWHV 290

Query: 298 IWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVD 357
           IWVKNGN GYD+IRAAI+EAKAVTDKPTLI+VTTTIG+GSPNKANSYSVHG+ALG KEV+
Sbjct: 291 IWVKNGNNGYDEIRAAIREAKAVTDKPTLIKVTTTIGYGSPNKANSYSVHGAALGEKEVE 350

Query: 358 ATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEFKSISS 417
           ATR NLGWPYEPFHVPEDVK HWSRH  EGA LEA+WNAKFA YEKKYPEEAAE KSI S
Sbjct: 351 ATRNNLGWPYEPFHVPEDVKSHWSRHTPEGAALEADWNAKFAAYEKKYPEEAAELKSIIS 410

Query: 418 GQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFG 477
           G+LP GWEKALPTYTP+SP +ATRNLSQ CLNALAK +PG LGGSADLASSNMT+LK FG
Sbjct: 411 GELPVGWEKALPTYTPDSPGDATRNLSQQCLNALAKAVPGFLGGSADLASSNMTMLKAFG 470

Query: 478 DFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCE 537
           +FQK TPEERN+RFGVREHGMGAICNGIALHSPG IPYCATFFVFTDYMRAA+RISAL E
Sbjct: 471 NFQKATPEERNLRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAAMRISALSE 530

Query: 538 AGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKR 597
           AGVIYVMTHDSIGLGEDGPTHQPIEHL+SFRAMPNI+M RPADGNETAGAYK+AV  RK 
Sbjct: 531 AGVIYVMTHDSIGLGEDGPTHQPIEHLSSFRAMPNIMMFRPADGNETAGAYKIAVTKRKT 590

Query: 598 PSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEIAAKAAEELR 657
           PS+LALSRQKLP L GTSI+ VEKG Y ISDNS+GNKPDVILIGTGSELEIAA+AAE+LR
Sbjct: 591 PSVLALSRQKLPQLPGTSIESVEKGGYTISDNSTGNKPDVILIGTGSELEIAAQAAEKLR 650

Query: 658 KGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGI 717
           + GK+VRVVSFV WELFDEQSDAYKESVLP+ VSARVSIEAGSTFGW KIVG KGK+IGI
Sbjct: 651 EQGKSVRVVSFVCWELFDEQSDAYKESVLPSDVSARVSIEAGSTFGWGKIVGGKGKSIGI 710

Query: 718 DRFGASAPAGKIYKEFGITAEAVITAAKEV 747
           D FGASAPAGK+YKEFGIT EA++ AAK +
Sbjct: 711 DTFGASAPAGKLYKEFGITIEAMVEAAKSL 740

Catalyzes the reversible transfer of a two-carbon ketol group from fructose-6-phosphate or sedoheptulose-7-phosphate to glyceraldehyde-3-phosphate to yield xylulose-5-phosphate and erythrose-4-phosphate or ribose-5-phosphate, respectively (By similarity). Could act as a stress sensor involved in adaptation process.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 2EC: .EC: 1EC: .EC: 1

>sp\|Q8RWV0\|TKTC1_ARATH Transketolase-1, chloroplastic OS=Arabidopsis thaliana GN=TKL-1 PE=1 SV=1	Back alignment and function description

>sp\|Q43848\|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1	Back alignment and function description

>sp\|Q7SIC9\|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1	Back alignment and function description

>sp\|O20250\|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1	Back alignment and function description

>sp\|Q42677\|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1	Back alignment and function description

>sp\|Q42675\|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1	Back alignment and function description

>sp\|Q42676\|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1	Back alignment and function description

>sp\|Q8YRU9\|TKT_NOSS1 Transketolase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=tkt PE=1 SV=1	Back alignment and function description

>sp\|Q9KAD7\|TKT_BACHD Transketolase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=tkt PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		748
255541252		752	transketolase, putative [Ricinus communi	0.989	0.984	0.872	0.0
449498919		745	PREDICTED: transketolase, chloroplastic-	0.994	0.998	0.867	0.0
449454520		745	PREDICTED: transketolase, chloroplastic-	0.994	0.998	0.866	0.0
118487947		744	unknown [Populus trichocarpa]	0.993	0.998	0.872	0.0
224063766		744	predicted protein [Populus trichocarpa]	0.993	0.998	0.871	0.0
118481093		744	unknown [Populus trichocarpa]	0.993	0.998	0.867	0.0
356576867		740	PREDICTED: transketolase, chloroplastic-	0.987	0.998	0.860	0.0
449432267		742	PREDICTED: transketolase, chloroplastic-	0.990	0.998	0.844	0.0
356536526		742	PREDICTED: transketolase, chloroplastic-	0.990	0.998	0.859	0.0
30689983		741	Transketolase [Arabidopsis thaliana] gi\|	0.985	0.994	0.825	0.0

>gi\|255541252\|ref\|XP_002511690.1\| transketolase, putative [Ricinus communis] gi\|223548870\|gb\|EEF50359.1\| transketolase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1367 bits (3538), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 663/760 (87%), Positives = 699/760 (91%), Gaps = 20/760 (2%)

Query: 1   MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLSLPSFSGLKSTSSS--------- 51
           MAS+SS TLSQALL R  SHH  TQSS+  RL+LST SLP+FSGLKSTSSS         
Sbjct: 1   MASTSSLTLSQALLARAISHHVSTQSSD--RLSLSTPSLPAFSGLKSTSSSIPRATSSRR 58

Query: 52  ---TLRTPTSRRRLSTSQASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANS 108
                  PT+RR L T     P RAAAVETL+ +TD +LVEKSVNTIRFLA+DAVEKANS
Sbjct: 59  SRRNSSIPTARR-LQT-----PTRAAAVETLDVTTDTSLVEKSVNTIRFLAIDAVEKANS 112

Query: 109 GHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQ 168
           GHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV+
Sbjct: 113 GHPGLPMGCAPMGHILYDEIMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVK 172

Query: 169 EDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNE 228
           E+DLK+FRQWGSKTPGHPENFETPG+EVTTGPLGQG+ANAVGLALAEKHLAAR+NKPDNE
Sbjct: 173 EEDLKSFRQWGSKTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDNE 232

Query: 229 IVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDK 288
           IVDHYTY ILGDGCQMEGIANEA SLAGH GLGKLIAFYDDNHISIDGDTEIAFTE+VDK
Sbjct: 233 IVDHYTYAILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTESVDK 292

Query: 289 RFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHG 348
           RFE LGWHVIWVKNGNTGYD+IRAAIKEAKAVTDKPT+I+VTTTIG+GSPNKANSYSVHG
Sbjct: 293 RFEALGWHVIWVKNGNTGYDEIRAAIKEAKAVTDKPTMIKVTTTIGYGSPNKANSYSVHG 352

Query: 349 SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEE 408
           SALGAKEVDATRKNLGWP+EPFHVPEDVK HWSRH+  GA  EAEWNAKFAEYEKKY EE
Sbjct: 353 SALGAKEVDATRKNLGWPFEPFHVPEDVKNHWSRHIPGGAAFEAEWNAKFAEYEKKYKEE 412

Query: 409 AAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASS 468
           AAE KSI  G+LPAGWEKALPTYTPESPA+ATRNLSQ  LNALAK LPGLLGGSADLASS
Sbjct: 413 AAELKSIIKGELPAGWEKALPTYTPESPADATRNLSQANLNALAKVLPGLLGGSADLASS 472

Query: 469 NMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRA 528
           NMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRA
Sbjct: 473 NMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRA 532

Query: 529 AIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAY 588
           A+RISAL EAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILM RPADGNETAGAY
Sbjct: 533 AMRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMFRPADGNETAGAY 592

Query: 589 KVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEI 648
           ++AV NRKRPS+LALSRQKLP L GTSI+GVEKG Y ISDNSSGNKPDVILIGTGSELEI
Sbjct: 593 RIAVLNRKRPSVLALSRQKLPQLPGTSIEGVEKGGYTISDNSSGNKPDVILIGTGSELEI 652

Query: 649 AAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIV 708
           AAKAAEELR+ GKAVRVVSFVSWELFDEQSDAYKESVLPAAV+ARVSIEAGSTFGW+KIV
Sbjct: 653 AAKAAEELRREGKAVRVVSFVSWELFDEQSDAYKESVLPAAVTARVSIEAGSTFGWQKIV 712

Query: 709 GSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC 748
           G KGKAIGIDRFGASAPAGKIYKE+GITAEAVI AAKE+C
Sbjct: 713 GGKGKAIGIDRFGASAPAGKIYKEYGITAEAVIAAAKELC 752

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449498919\|ref\|XP_004160671.1\| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449454520\|ref\|XP_004145002.1\| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus] gi\|449474170\|ref\|XP_004154093.1\| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|118487947\|gb\|ABK95795.1\| unknown [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224063766\|ref\|XP_002301278.1\| predicted protein [Populus trichocarpa] gi\|222843004\|gb\|EEE80551.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|118481093\|gb\|ABK92500.1\| unknown [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356576867\|ref\|XP_003556551.1\| PREDICTED: transketolase, chloroplastic-like [Glycine max]	Back alignment and taxonomy information

>gi\|449432267\|ref\|XP_004133921.1\| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus] gi\|449480047\|ref\|XP_004155784.1\| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus] gi\|351735634\|gb\|AEQ59483.1\| chloroplast transketolase [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356536526\|ref\|XP_003536788.1\| PREDICTED: transketolase, chloroplastic-like [Glycine max]	Back alignment and taxonomy information

>gi\|30689983\|ref\|NP_566041.2\| Transketolase [Arabidopsis thaliana] gi\|330255441\|gb\|AEC10535.1\| Transketolase [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		748
UNIPROTKB\|Q43848		741	Q43848 "Transketolase, chlorop	0.989	0.998	0.787	5.50000003364e-317
TAIR\|locus:2050837		741	AT2G45290 [Arabidopsis thalian	0.989	0.998	0.769	5.49999999906e-315
TAIR\|locus:2101871		741	AT3G60750 [Arabidopsis thalian	0.985	0.994	0.774	1.09999999981e-314
UNIPROTKB\|O20250		741	O20250 "Transketolase, chlorop	0.911	0.920	0.818	7.7e-309
TIGR_CMR\|BA_3744		666	BA_3744 "transketolase" [Bacil	0.878	0.986	0.523	1.9e-179
TIGR_CMR\|DET_0644		666	DET_0644 "transketolase" [Deha	0.854	0.959	0.516	2.1e-173
TIGR_CMR\|DET_0678		666	DET_0678 "transketolase" [Deha	0.854	0.959	0.516	2.1e-173
UNIPROTKB\|G4MRY4		687	MGG_02471 "Transketolase" [Mag	0.863	0.940	0.511	1e-171
ASPGD\|ASPL0000053784		684	AN0688 [Emericella nidulans (t	0.858	0.938	0.515	4.4e-171
UNIPROTKB\|Q9KLW7		664	tkt2 "Transketolase 2" [Vibrio	0.867	0.977	0.508	4.2e-166

UNIPROTKB\|Q43848 Q43848 "Transketolase, chloroplastic" [Solanum tuberosum (taxid:4113)]	Back alignment and assigned GO terms

 Score = 3040 (1075.2 bits), Expect = 5.5e-317, P = 5.5e-317
 Identities = 588/747 (78%), Positives = 624/747 (83%)

Query:     1 MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLXXXXXXXXXXXXXXXXXXXXXXX 60
             MASSSS TLSQ + +     HG + SS    L+ ST                        
Sbjct:     1 MASSSSLTLSQVIFSPSLPRHG-SSSSSSPSLSFSTFSGLKSTPFTSSHRRILPSTTVTK 59

Query:    61 XXXXXQASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPM 120
                  +AS     AAVETLE  TDAA+VEKSVNTIRFLA+DAVEKANSGHPGLPMGCAPM
Sbjct:    60 QQFSVRAS-----AAVETLE-KTDAAIVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPM 113

Query:   121 GHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGS 180
             GHILYDEVM+YNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLK+FRQWGS
Sbjct:   114 GHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKSFRQWGS 173

Query:   181 KTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGD 240
             + PGHPENFETPG+EVTTGPLGQG+ANAVGLA+AEKHLAAR+NKPD EIVDHYTYVILGD
Sbjct:   174 RIPGHPENFETPGVEVTTGPLGQGIANAVGLAVAEKHLAARFNKPDAEIVDHYTYVILGD 233

Query:   241 GCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWV 300
             GCQMEGI+NE  SLAGH GLGKLIAFYDDNHISIDGDTEIAFTE+V  RFE LGWHVIWV
Sbjct:   234 GCQMEGISNEVCSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTEDVSARFESLGWHVIWV 293

Query:   301 KNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATR 360
             KNGNTGYD+IRAAIKEAKAV DKPT+I+VTTTIGFGSPNKANSYSVHGS LGAKEV+ATR
Sbjct:   294 KNGNTGYDEIRAAIKEAKAVKDKPTMIKVTTTIGFGSPNKANSYSVHGSGLGAKEVEATR 353

Query:   361 KNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQL 420
              NLGWPYEPFHVPEDVK HWSRH  EGA LE EWN                  SI +G+L
Sbjct:   354 NNLGWPYEPFHVPEDVKSHWSRHTPEGAALETEWNAKFAEYEKKYAEEAADLKSIITGEL 413

Query:   421 PAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQ 480
             PAGWEKALPTYTPESPA+ATRNLSQ  LNALAK LPG LGGSADLASSNMTLLKMFGDFQ
Sbjct:   414 PAGWEKALPTYTPESPADATRNLSQQNLNALAKVLPGFLGGSADLASSNMTLLKMFGDFQ 473

Query:   481 KDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGV 540
             K+TPEERN+RFGVREHGMGAICNGIALHS GLIPYCATFFVFTDYMR A+RISAL EAGV
Sbjct:   474 KNTPEERNLRFGVREHGMGAICNGIALHSLGLIPYCATFFVFTDYMRGAMRISALSEAGV 533

Query:   541 IYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSI 600
             IYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILM RPADGNETAGAYKVAV  RK PSI
Sbjct:   534 IYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMFRPADGNETAGAYKVAVLKRKTPSI 593

Query:   601 LALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXXRKGG 660
             LALSRQKLP LAGTSI+G  KG YI+SDNSSGNKPDVILIGTGS            +K G
Sbjct:   594 LALSRQKLPQLAGTSIEGAAKGGYIVSDNSSGNKPDVILIGTGSELEIAVKAAEELKKEG 653

Query:   661 KAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRF 720
             K VRVVSFV WEL+DEQS  YKESVLP++V+ARVSIEAGSTFGW+K VG KGKAIGID F
Sbjct:   654 KTVRVVSFVCWELYDEQSAEYKESVLPSSVTARVSIEAGSTFGWQKFVGDKGKAIGIDGF 713

Query:   721 GASAPAGKIYKEFGITAEAVITAAKEV 747
             GASAPA KIYKEFGITAEAV+ AAK+V
Sbjct:   714 GASAPADKIYKEFGITAEAVVAAAKQV 740

GO:0004802 "transketolase activity" evidence=ISS

GO:0009535 "chloroplast thylakoid membrane" evidence=ISS

TAIR\|locus:2050837 AT2G45290 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2101871 AT3G60750 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|O20250 O20250 "Transketolase, chloroplastic" [Spinacia oleracea (taxid:3562)]	Back alignment and assigned GO terms

TIGR_CMR\|BA_3744 BA_3744 "transketolase" [Bacillus anthracis str. Ames (taxid:198094)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0644 DET_0644 "transketolase" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0678 DET_0678 "transketolase" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

UNIPROTKB\|G4MRY4 MGG_02471 "Transketolase" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000053784 AN0688 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9KLW7 tkt2 "Transketolase 2" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7MDD4	TKT2_VIBVY	2, ., 2, ., 1, ., 1	0.5310	0.8663	0.9773	yes	no
Q7SIC9	TKTC_MAIZE	2, ., 2, ., 1, ., 1	0.8660	0.8970	0.9940	N/A	no
Q42675	TKTA_CRAPL	2, ., 2, ., 1, ., 1	0.7782	0.8850	0.9749	N/A	no
Q42676	TKTC_CRAPL	2, ., 2, ., 1, ., 1	0.8725	0.6925	0.9980	N/A	no
Q42677	TKT7_CRAPL	2, ., 2, ., 1, ., 1	0.7740	0.8850	0.9792	N/A	no
Q7MHK7	TKT1_VIBVY	2, ., 2, ., 1, ., 1	0.5219	0.8663	0.9759	yes	no
Q12630	TKT1_KLULA	2, ., 2, ., 1, ., 1	0.5172	0.8636	0.9513	yes	no
P99161	TKT_STAAN	2, ., 2, ., 1, ., 1	0.4977	0.8609	0.9728	yes	no
P27302	TKT1_ECOLI	2, ., 2, ., 1, ., 1	0.5037	0.8663	0.9773	N/A	no
Q87LK8	TKT1_VIBPA	2, ., 2, ., 1, ., 1	0.5249	0.8663	0.9759	yes	no
O94039	TKT1_CANAX	2, ., 2, ., 1, ., 1	0.5067	0.8729	0.9645	N/A	no
F4IW47	TKTC2_ARATH	2, ., 2, ., 1, ., 1	0.8253	0.9852	0.9946	yes	no
P57195	TKT_BUCAI	2, ., 2, ., 1, ., 1	0.4741	0.8622	0.9699	yes	no
P34736	TKT_PICST	2, ., 2, ., 1, ., 1	0.5247	0.8689	0.9601	yes	no
P66963	TKT_STAAW	2, ., 2, ., 1, ., 1	0.4977	0.8609	0.9728	yes	no
P66962	TKT_STAAM	2, ., 2, ., 1, ., 1	0.4977	0.8609	0.9728	yes	no
Q87GY4	TKT2_VIBPA	2, ., 2, ., 1, ., 1	0.5295	0.8663	0.9773	yes	no
Q5XAK5	TKT_STRP6	2, ., 2, ., 1, ., 1	0.5056	0.9024	0.9259	N/A	no
P57927	TKT1_PASMU	2, ., 2, ., 1, ., 1	0.5098	0.8703	0.9745	yes	no
Q5HG77	TKT_STAAC	2, ., 2, ., 1, ., 1	0.4977	0.8609	0.9728	yes	no
Q8D6H8	TKT2_VIBVU	2, ., 2, ., 1, ., 1	0.5264	0.8663	0.9773	yes	no
P22976	TKT_STRPN	2, ., 2, ., 1, ., 1	0.5204	0.8703	0.9893	yes	no
P21726	TKTP_CUPNH	2, ., 2, ., 1, ., 1	0.5233	0.8636	0.9641	yes	no
Q6G9L6	TKT_STAAS	2, ., 2, ., 1, ., 1	0.4977	0.8609	0.9728	yes	no
Q5DZP0	TKT2_VIBF1	2, ., 2, ., 1, ., 1	0.5158	0.8663	0.9773	yes	no
P21725	TKTC_CUPNH	2, ., 2, ., 1, ., 1	0.5226	0.8649	0.9656	yes	no
Q43848	TKTC_SOLTU	2, ., 2, ., 1, ., 1	0.8244	0.9826	0.9919	N/A	no
Q8RWV0	TKTC1_ARATH	2, ., 2, ., 1, ., 1	0.8208	0.9826	0.9919	no	no
Q9KAD7	TKT_BACHD	2, ., 2, ., 1, ., 1	0.5468	0.8703	0.9774	yes	no
P33570	TKT2_ECOLI	2, ., 2, ., 1, ., 1	0.5226	0.8676	0.9730	N/A	no
Q8KA26	TKT_BUCAP	2, ., 2, ., 1, ., 1	0.4803	0.8622	0.9699	yes	no
Q9URM2	TKT_SCHPO	2, ., 2, ., 1, ., 1	0.4759	0.8636	0.9430	yes	no
O20250	TKTC_SPIOL	2, ., 2, ., 1, ., 1	0.8319	0.9478	0.9568	N/A	no
Q8YRU9	TKT_NOSS1	2, ., 2, ., 1, ., 1	0.6536	0.8823	0.9850	yes	no
Q5HPJ9	TKT_STAEQ	2, ., 2, ., 1, ., 1	0.4984	0.8676	0.9803	yes	no
P45694	TKT_BACSU	2, ., 2, ., 1, ., 1	0.5308	0.8756	0.9820	yes	no
Q8CPC7	TKT_STAES	2, ., 2, ., 1, ., 1	0.4984	0.8676	0.9803	yes	no
Q9KLW7	TKT2_VIBCH	2, ., 2, ., 1, ., 1	0.5355	0.8676	0.9774	yes	no
O67642	TKT_AQUAE	2, ., 2, ., 1, ., 1	0.4894	0.8676	0.9419	yes	no
Q6GH64	TKT_STAAR	2, ., 2, ., 1, ., 1	0.4961	0.8609	0.9728	yes	no
P23254	TKT1_YEAST	2, ., 2, ., 1, ., 1	0.5203	0.8649	0.9514	yes	no
Q8NZX4	TKT_STRP8	2, ., 2, ., 1, ., 1	0.5014	0.9050	0.9286	N/A	no
P57958	TKT2_PASMU	2, ., 2, ., 1, ., 1	0.5128	0.8703	0.9745	yes	no
P43757	TKT_HAEIN	2, ., 2, ., 1, ., 1	0.5302	0.8676	0.9759	yes	no
Q89AY2	TKT_BUCBP	2, ., 2, ., 1, ., 1	0.4865	0.8729	0.9804	yes	no
Q8DCA2	TKT1_VIBVU	2, ., 2, ., 1, ., 1	0.5204	0.8663	0.9759	yes	no
Q9KUP2	TKT1_VIBCH	2, ., 2, ., 1, ., 1	0.5355	0.8676	0.9759	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.2.1.1	0.994
3rd Layer	2.2.1	0.998

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00021349	SubName- Full=Putative uncharacterized protein; (745 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.127.161.1	hypothetical protein (339 aa)	•		•		•	•	0.980
	estExt_Genewise1_v1.C_1290095	ribulose-phosphate 3-epimerase (EC-5.1.3.1) (286 aa)	•	•		•	•	•	0.971
	estExt_fgenesh4_pg.C_LG_I2289	SubName- Full=Putative uncharacterized protein; (226 aa)	•			•	•	•	0.970
	gw1.VIII.2574.1	glucose-6-phosphate isomerase (EC-5.3.1.9) (569 aa)	•		•		•	•	0.951
	grail3.0008017101	hypothetical protein (441 aa)	•	•			•	•	0.933
	gw1.II.3030.1	glucose-6-phosphate isomerase (EC-5.3.1.9) (542 aa)					•	•	0.929
	gw1.29.190.1	ribose-phosphate diphosphokinase (EC-2.7.6.1) (340 aa)					•	•	0.927
	estExt_Genewise1_v1.C_LG_IV0988	hypothetical protein (256 aa)					•	•	0.923
	estExt_fgenesh4_pg.C_LG_I1744	triose-phosphate isomerase (EC-5.3.1.1) (255 aa)					•	•	0.922
	grail3.0049021504	RecName- Full=Triosephosphate isomerase; EC=5.3.1.1; (254 aa)					•	•	0.922

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		748
PLN02790		654	PLN02790, PLN02790, transketolase	0.0
COG0021		663	COG0021, TktA, Transketolase [Carbohydrate transpo	0.0
PTZ00089		661	PTZ00089, PTZ00089, transketolase; Provisional	0.0
TIGR00232		653	TIGR00232, tktlase_bact, transketolase, bacterial	0.0
PRK05899		586	PRK05899, PRK05899, transketolase; Reviewed	0.0
PRK12753		663	PRK12753, PRK12753, transketolase; Reviewed	0.0
PRK12754		663	PRK12754, PRK12754, transketolase; Reviewed	0.0
pfam00456		333	pfam00456, Transketolase_N, Transketolase, thiamin	0.0
cd02012		255	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) fami	1e-140
cd07033		156	cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) bin	3e-61
pfam02779		172	pfam02779, Transket_pyr, Transketolase, pyrimidine	6e-58
COG3959		243	COG3959, COG3959, Transketolase, N-terminal subuni	3e-57
smart00861		136	smart00861, Transket_pyr, Transketolase, pyrimidin	7e-37
COG3958		312	COG3958, COG3958, Transketolase, C-terminal subuni	4e-30
cd00568		168	cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP)	2e-09
pfam02780		124	pfam02780, Transketolase_C, Transketolase, C-termi	3e-09
PRK05444		580	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate	6e-09
COG1154		627	COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [	9e-09
TIGR00204		617	TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate syn	1e-07
cd02007		195	cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) fam	1e-07
cd02017		386	cd02017, TPP_E1_EcPDC_like, Thiamine pyrophosphate	1e-07
COG2609		887	COG2609, AceE, Pyruvate dehydrogenase complex, deh	2e-06
PRK12571		641	PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate	5e-06
COG3957		793	COG3957, COG3957, Phosphoketolase [Carbohydrate tr	2e-05
PRK12315		581	PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate	2e-05
cd02000		293	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosph	1e-04
PLN02234		641	PLN02234, PLN02234, 1-deoxy-D-xylulose-5-phosphate	1e-04
COG2609		887	COG2609, AceE, Pyruvate dehydrogenase complex, deh	0.002
PLN02582		677	PLN02582, PLN02582, 1-deoxy-D-xylulose-5-phosphate	0.002

>gnl\|CDD\|215424 PLN02790, PLN02790, transketolase	Back alignment and domain information

 Score = 1411 bits (3654), Expect = 0.0
 Identities = 569/654 (87%), Positives = 613/654 (93%)

Query: 95  IRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCML 154
           IRFLA+DAV KANSGHPGLPMGCAPMGH+LYDEVM+YNPKNPYWFNRDRFVLSAGHGCML
Sbjct: 1   IRFLAIDAVNKANSGHPGLPMGCAPMGHVLYDEVMKYNPKNPYWFNRDRFVLSAGHGCML 60

Query: 155 QYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALA 214
           QYALLHLAGYDSVQ +DLK FRQWGS+TPGHPENFETPGIEVTTGPLGQG+ANAVGLALA
Sbjct: 61  QYALLHLAGYDSVQMEDLKQFRQWGSRTPGHPENFETPGIEVTTGPLGQGIANAVGLALA 120

Query: 215 EKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISI 274
           EKHLAAR+NKPD++IVDHYTY ILGDGCQMEGI+NEA+SLAGH GLGKLI  YDDNHISI
Sbjct: 121 EKHLAARFNKPDHKIVDHYTYCILGDGCQMEGISNEAASLAGHWGLGKLIVLYDDNHISI 180

Query: 275 DGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIG 334
           DGDTEIAFTE+VDKR+E LGWH IWVKNGNT YD+IRAAIKEAKAVTDKPTLI+VTTTIG
Sbjct: 181 DGDTEIAFTEDVDKRYEALGWHTIWVKNGNTDYDEIRAAIKEAKAVTDKPTLIKVTTTIG 240

Query: 335 FGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEW 394
           +GSPNKANSYSVHG+ALG KEVDATRKNLGWPYEPFHVPEDVK HWS+H  EGA LEAEW
Sbjct: 241 YGSPNKANSYSVHGAALGEKEVDATRKNLGWPYEPFHVPEDVKSHWSKHTKEGAALEAEW 300

Query: 395 NAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKT 454
           NAKFAEY+KKYPEEAAE KS+ SG+LP+GWEKALPT+TPE PA+ATRNLSQ CLNALAK 
Sbjct: 301 NAKFAEYKKKYPEEAAELKSLISGELPSGWEKALPTFTPEDPADATRNLSQKCLNALAKV 360

Query: 455 LPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIP 514
           LPGL+GGSADLASSNMTLLK FGDFQKDTPEERNVRFGVREHGMGAICNGIALHS GLIP
Sbjct: 361 LPGLIGGSADLASSNMTLLKDFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSSGLIP 420

Query: 515 YCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNIL 574
           YCATFFVFTDYMRAA+R+SAL EAGVIYVMTHDSIGLGEDGPTHQPIEHLAS RAMPNIL
Sbjct: 421 YCATFFVFTDYMRAAMRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASLRAMPNIL 480

Query: 575 MLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNK 634
           MLRPADGNETAGAYKVAV NRKRP++LALSRQK+P+L GTSI+GVEKG Y+ISDNSSGNK
Sbjct: 481 MLRPADGNETAGAYKVAVTNRKRPTVLALSRQKVPNLPGTSIEGVEKGGYVISDNSSGNK 540

Query: 635 PDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARV 694
           PD+ILIGTGSELEIAAKAA+ELRK GK VRVVS V WELF+EQSD YKESVLP++V+ARV
Sbjct: 541 PDLILIGTGSELEIAAKAAKELRKEGKKVRVVSMVCWELFEEQSDEYKESVLPSSVTARV 600

Query: 695 SIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC 748
           S+EAGSTFGWEK VGSKGK IG+DRFGASAPAG +YKEFG T E V+ AAK + 
Sbjct: 601 SVEAGSTFGWEKYVGSKGKVIGVDRFGASAPAGILYKEFGFTVENVVAAAKSLL 654

Length = 654

>gnl\|CDD\|223100 COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|173383 PTZ00089, PTZ00089, transketolase; Provisional	Back alignment and domain information

>gnl\|CDD\|232887 TIGR00232, tktlase_bact, transketolase, bacterial and yeast	Back alignment and domain information

>gnl\|CDD\|235639 PRK05899, PRK05899, transketolase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183723 PRK12753, PRK12753, transketolase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183724 PRK12754, PRK12754, transketolase; Reviewed	Back alignment and domain information

>gnl\|CDD\|144157 pfam00456, Transketolase_N, Transketolase, thiamine diphosphate binding domain	Back alignment and domain information

>gnl\|CDD\|238970 cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	Back alignment and domain information

>gnl\|CDD\|132916 cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	Back alignment and domain information

>gnl\|CDD\|217226 pfam02779, Transket_pyr, Transketolase, pyrimidine binding domain	Back alignment and domain information

>gnl\|CDD\|226468 COG3959, COG3959, Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|214865 smart00861, Transket_pyr, Transketolase, pyrimidine binding domain	Back alignment and domain information

>gnl\|CDD\|226467 COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|238318 cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor	Back alignment and domain information

>gnl\|CDD\|217227 pfam02780, Transketolase_C, Transketolase, C-terminal domain	Back alignment and domain information

>gnl\|CDD\|235470 PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|224076 COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|129308 TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>gnl\|CDD\|238965 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis	Back alignment and domain information

>gnl\|CDD\|238975 cd02017, TPP_E1_EcPDC_like, Thiamine pyrophosphate (TPP) family, E1 of E	Back alignment and domain information

>gnl\|CDD\|225329 COG2609, AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|183601 PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|226466 COG3957, COG3957, Phosphoketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|237053 PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|238958 cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	Back alignment and domain information

>gnl\|CDD\|177878 PLN02234, PLN02234, 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>gnl\|CDD\|225329 COG2609, AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|178194 PLN02582, PLN02582, 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		748
COG0021		663	TktA Transketolase [Carbohydrate transport and met	100.0
PRK12754		663	transketolase; Reviewed	100.0
PRK12753		663	transketolase; Reviewed	100.0
PLN02790		654	transketolase	100.0
TIGR00232		653	tktlase_bact transketolase, bacterial and yeast. T	100.0
PTZ00089		661	transketolase; Provisional	100.0
KOG0523		632	consensus Transketolase [Carbohydrate transport an	100.0
PRK05899		624	transketolase; Reviewed	100.0
PLN02582		677	1-deoxy-D-xylulose-5-phosphate synthase	100.0
COG1154		627	Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m	100.0
PRK13012		896	2-oxoacid dehydrogenase subunit E1; Provisional	100.0
TIGR00204		617	dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s	100.0
PRK05444		580	1-deoxy-D-xylulose-5-phosphate synthase; Provision	100.0
TIGR03186		889	AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S	100.0
PRK12571		641	1-deoxy-D-xylulose-5-phosphate synthase; Provision	100.0
PLN02234		641	1-deoxy-D-xylulose-5-phosphate synthase	100.0
PLN02225		701	1-deoxy-D-xylulose-5-phosphate synthase	100.0
PRK12315		581	1-deoxy-D-xylulose-5-phosphate synthase; Provision	100.0
PRK09405		891	aceE pyruvate dehydrogenase subunit E1; Reviewed	100.0
TIGR00759		885	aceE pyruvate dehydrogenase E1 component, homodime	100.0
PF00456		332	Transketolase_N: Transketolase, thiamine diphospha	100.0
PRK05261		785	putative phosphoketolase; Provisional	100.0
COG3958		312	Transketolase, C-terminal subunit [Carbohydrate tr	100.0
COG3959		243	Transketolase, N-terminal subunit [Carbohydrate tr	100.0
COG2609		887	AceE Pyruvate dehydrogenase complex, dehydrogenase	100.0
cd02017		386	TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam	100.0
cd02012		255	TPP_TK Thiamine pyrophosphate (TPP) family, Transk	100.0
CHL00144		327	odpB pyruvate dehydrogenase E1 component beta subu	100.0
PRK11892		464	pyruvate dehydrogenase subunit beta; Provisional	100.0
PLN02683		356	pyruvate dehydrogenase E1 component subunit beta	100.0
PRK09212		327	pyruvate dehydrogenase subunit beta; Validated	100.0
PTZ00182		355	3-methyl-2-oxobutanate dehydrogenase; Provisional	100.0
COG0022		324	AcoB Pyruvate/2-oxoglutarate dehydrogenase complex	100.0
PRK09404		924	sucA 2-oxoglutarate dehydrogenase E1 component; Re	100.0
cd02007		195	TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s	100.0
PF13292		270	DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn	100.0
TIGR00239		929	2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon	100.0
KOG0524		359	consensus Pyruvate dehydrogenase E1, beta subunit	100.0
cd07033		156	TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai	100.0
PF02779		178	Transket_pyr: Transketolase, pyrimidine binding do	100.0
cd07036		167	TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding	99.98
COG3957		793	Phosphoketolase [Carbohydrate transport and metabo	99.98
smart00861		168	Transket_pyr Transketolase, pyrimidine binding dom	99.97
KOG0525		362	consensus Branched chain alpha-keto acid dehydroge	99.97
cd02011		227	TPP_PK Thiamine pyrophosphate (TPP) family, Phosph	99.95
COG1071		358	AcoA Pyruvate/2-oxoglutarate dehydrogenase complex	99.94
CHL00149		341	odpA pyruvate dehydrogenase E1 component alpha sub	99.94
PF00676		300	E1_dh: Dehydrogenase E1 component; InterPro: IPR00	99.93
cd02000		293	TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP)	99.93
PLN02374		433	pyruvate dehydrogenase (acetyl-transferring)	99.93
PLN02269		362	Pyruvate dehydrogenase E1 component subunit alpha	99.92
TIGR03182		315	PDH_E1_alph_y pyruvate dehydrogenase E1 component,	99.92
TIGR03181		341	PDH_E1_alph_x pyruvate dehydrogenase E1 component,	99.91
KOG0225		394	consensus Pyruvate dehydrogenase E1, alpha subunit	99.81
cd02016		265	TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami	99.8
PF09364		379	XFP_N: XFP N-terminal domain; InterPro: IPR018970	99.77
cd00568		168	TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa	99.72
KOG1182		432	consensus Branched chain alpha-keto acid dehydroge	99.7
cd02004		172	TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam	99.68
cd02008		178	TPP_IOR_alpha Thiamine pyrophosphate (TPP) family,	99.67
cd02003		205	TPP_IolD Thiamine pyrophosphate (TPP) family, IolD	99.64
cd03371		188	TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp	99.64
PRK06163		202	hypothetical protein; Provisional	99.62
cd02001		157	TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil	99.61
cd02015		186	TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet	99.61
cd02013		196	TPP_Xsc_like Thiamine pyrophosphate (TPP) family,	99.61
cd02006		202	TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s	99.6
PRK12270		1228	kgd alpha-ketoglutarate decarboxylase; Reviewed	99.6
PF02780		124	Transketolase_C: Transketolase, C-terminal domain;	99.59
cd02002		178	TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC	99.59
cd02010		177	TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto	99.58
cd02005		183	TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family,	99.58
TIGR03846		181	sulfopy_beta sulfopyruvate decarboxylase, beta sub	99.56
cd02014		178	TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv	99.55
PF02775		153	TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter	99.55
TIGR03297		361	Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi	99.54
cd03372		179	TPP_ComE Thiamine pyrophosphate (TPP) family, ComE	99.54
cd02009		175	TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa	99.54
cd03375		193	TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o	99.47
COG0028		550	IlvB Thiamine pyrophosphate-requiring enzymes [ace	99.44
PRK12474		518	hypothetical protein; Provisional	99.44
TIGR02418		539	acolac_catab acetolactate synthase, catabolic. Ace	99.43
PRK06154		565	hypothetical protein; Provisional	99.42
PRK07586		514	hypothetical protein; Validated	99.42
PRK08266		542	hypothetical protein; Provisional	99.42
TIGR01504		588	glyox_carbo_lig glyoxylate carboligase. Glyoxylate	99.42
PRK09124		574	pyruvate dehydrogenase; Provisional	99.41
PRK06965		587	acetolactate synthase 3 catalytic subunit; Validat	99.41
cd03376		235	TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam	99.41
PRK07524		535	hypothetical protein; Provisional	99.41
TIGR03393		539	indolpyr_decarb indolepyruvate decarboxylase, Erwi	99.41
PRK09107		595	acetolactate synthase 3 catalytic subunit; Validat	99.4
PRK07064		544	hypothetical protein; Provisional	99.4
PRK08979		572	acetolactate synthase 3 catalytic subunit; Validat	99.39
PRK06048		561	acetolactate synthase 3 catalytic subunit; Reviewe	99.39
PRK06546		578	pyruvate dehydrogenase; Provisional	99.39
PRK08978		548	acetolactate synthase 2 catalytic subunit; Reviewe	99.39
PRK05858		542	hypothetical protein; Provisional	99.39
PRK08611		576	pyruvate oxidase; Provisional	99.39
PRK06112		578	acetolactate synthase catalytic subunit; Validated	99.39
PRK07092		530	benzoylformate decarboxylase; Reviewed	99.39
PRK06456		572	acetolactate synthase catalytic subunit; Reviewed	99.38
PRK06466		574	acetolactate synthase 3 catalytic subunit; Validat	99.38
PRK07979		574	acetolactate synthase 3 catalytic subunit; Validat	99.38
PLN02573		578	pyruvate decarboxylase	99.38
PRK08322		547	acetolactate synthase; Reviewed	99.38
PLN02470		585	acetolactate synthase	99.38
PRK08527		563	acetolactate synthase 3 catalytic subunit; Validat	99.38
PRK06457		549	pyruvate dehydrogenase; Provisional	99.37
PRK08199		557	thiamine pyrophosphate protein; Validated	99.37
TIGR02720		575	pyruv_oxi_spxB pyruvate oxidase. Members of this f	99.37
PRK11269		591	glyoxylate carboligase; Provisional	99.37
PRK08617		552	acetolactate synthase; Reviewed	99.37
TIGR03457		579	sulphoacet_xsc sulfoacetaldehyde acetyltransferase	99.37
PRK07418		616	acetolactate synthase 3 catalytic subunit; Reviewe	99.37
PRK07710		571	acetolactate synthase catalytic subunit; Reviewed	99.37
PRK08273		597	thiamine pyrophosphate protein; Provisional	99.36
CHL00099		585	ilvB acetohydroxyacid synthase large subunit	99.36
PRK06882		574	acetolactate synthase 3 catalytic subunit; Validat	99.35
PRK06725		570	acetolactate synthase 3 catalytic subunit; Validat	99.35
PRK08155		564	acetolactate synthase catalytic subunit; Validated	99.34
TIGR00118		558	acolac_lg acetolactate synthase, large subunit, bi	99.34
PRK06276		586	acetolactate synthase catalytic subunit; Reviewed	99.34
PRK09259		569	putative oxalyl-CoA decarboxylase; Validated	99.34
TIGR03254		554	oxalate_oxc oxalyl-CoA decarboxylase. In a number	99.34
PRK07282		566	acetolactate synthase catalytic subunit; Reviewed	99.33
PRK07525		588	sulfoacetaldehyde acetyltransferase; Validated	99.32
TIGR03394		535	indol_phenyl_DC indolepyruvate/phenylpyruvate deca	99.32
TIGR03336		595	IOR_alpha indolepyruvate ferredoxin oxidoreductase	99.32
cd02018		237	TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru	99.32
PRK07789		612	acetolactate synthase 1 catalytic subunit; Validat	99.32
PRK07449		568	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1	99.31
PRK08327		569	acetolactate synthase catalytic subunit; Validated	99.3
PRK09628		277	oorB 2-oxoglutarate-acceptor oxidoreductase subuni	99.29
PRK07119		352	2-ketoisovalerate ferredoxin reductase; Validated	99.26
PRK05778		301	2-oxoglutarate ferredoxin oxidoreductase subunit b	99.24
PRK11869		280	2-oxoacid ferredoxin oxidoreductase subunit beta;	99.23
PRK11866		279	2-oxoacid ferredoxin oxidoreductase subunit beta;	99.22
COG3961		557	Pyruvate decarboxylase and related thiamine pyroph	99.18
PRK11867		286	2-oxoglutarate ferredoxin oxidoreductase subunit b	99.18
cd06586		154	TPP_enzyme_PYR Pyrimidine (PYR) binding domain of	99.18
TIGR02177		287	PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta	99.16
PRK08659		376	2-oxoglutarate ferredoxin oxidoreductase subunit a	99.13
TIGR03336		595	IOR_alpha indolepyruvate ferredoxin oxidoreductase	99.12
KOG0451		913	consensus Predicted 2-oxoglutarate dehydrogenase,	99.1
PRK11864		300	2-ketoisovalerate ferredoxin oxidoreductase subuni	99.06
PLN02980		1655	2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi	98.99
PRK09622		407	porA pyruvate flavodoxin oxidoreductase subunit al	98.99
PRK09627		375	oorA 2-oxoglutarate-acceptor oxidoreductase subuni	98.98
COG3962		617	Acetolactate synthase [Amino acid transport and me	98.85
KOG4166		675	consensus Thiamine pyrophosphate-requiring enzyme	98.84
KOG1184		561	consensus Thiamine pyrophosphate-requiring enzyme	98.8
KOG1185		571	consensus Thiamine pyrophosphate-requiring enzyme	98.79
PRK08366		390	vorA 2-ketoisovalerate ferredoxin oxidoreductase s	98.64
TIGR03710		562	OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha s	98.61
PF03894		179	XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate	98.58
PRK08367		394	porA pyruvate ferredoxin oxidoreductase subunit al	98.56
PRK11865		299	pyruvate ferredoxin oxidoreductase subunit beta; P	98.55
KOG0450		1017	consensus 2-oxoglutarate dehydrogenase, E1 subunit	98.35
COG0567		906	SucA 2-oxoglutarate dehydrogenase complex, dehydro	98.35
COG3960		592	Glyoxylate carboligase [General function predictio	98.14
TIGR02176		1165	pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid	98.0
COG4231		640	Indolepyruvate ferredoxin oxidoreductase, alpha an	97.59
COG1013		294	PorB Pyruvate:ferredoxin oxidoreductase and relate	97.52
COG4231		640	Indolepyruvate ferredoxin oxidoreductase, alpha an	97.47
COG0674		365	PorA Pyruvate:ferredoxin oxidoreductase and relate	97.44
COG1165		566	MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-car	97.17
TIGR03297		361	Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi	97.08
PF01855		230	POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta	96.76
cd07035		155	TPP_PYR_POX_like Pyrimidine (PYR) binding domain o	96.67
cd07034		160	TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi	96.42
PF02776		172	TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter	96.27
cd03377		365	TPP_PFOR_PNO Thiamine pyrophosphate (TPP family),	96.17
PRK09193		1165	indolepyruvate ferredoxin oxidoreductase; Validate	95.78
PRK13030		1159	2-oxoacid ferredoxin oxidoreductase; Provisional	95.77
PRK13030		1159	2-oxoacid ferredoxin oxidoreductase; Provisional	95.61
TIGR03845		157	sulfopyru_alph sulfopyruvate decarboxylase, alpha	95.34
PRK13029		1186	2-oxoacid ferredoxin oxidoreductase; Provisional	95.02
cd07037		162	TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-	94.89
cd07033		156	TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai	94.6
cd07039		164	TPP_PYR_POX Pyrimidine (PYR) binding domain of POX	94.47
PRK09193		1165	indolepyruvate ferredoxin oxidoreductase; Validate	94.33
cd01460		266	vWA_midasin VWA_Midasin: Midasin is a member of th	93.68
PRK07092		530	benzoylformate decarboxylase; Reviewed	93.49
cd07036		167	TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding	93.22
TIGR02176		1165	pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid	93.02
PRK13029		1186	2-oxoacid ferredoxin oxidoreductase; Provisional	92.5
cd02018		237	TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru	92.21
TIGR02418		539	acolac_catab acetolactate synthase, catabolic. Ace	92.2
PRK05858		542	hypothetical protein; Provisional	92.15
PRK08199		557	thiamine pyrophosphate protein; Validated	91.78
PF09363		203	XFP_C: XFP C-terminal domain; InterPro: IPR018969	91.76
PRK06466		574	acetolactate synthase 3 catalytic subunit; Validat	91.55
PRK07586		514	hypothetical protein; Validated	91.48
PRK08155		564	acetolactate synthase catalytic subunit; Validated	91.27
PRK07064		544	hypothetical protein; Provisional	91.23
PRK07524		535	hypothetical protein; Provisional	91.22
PRK08322		547	acetolactate synthase; Reviewed	91.2
PRK06112		578	acetolactate synthase catalytic subunit; Validated	91.18
cd07038		162	TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding dom	90.84
PRK08978		548	acetolactate synthase 2 catalytic subunit; Reviewe	90.75
PF02779		178	Transket_pyr: Transketolase, pyrimidine binding do	90.73
PRK08617		552	acetolactate synthase; Reviewed	90.62
PRK11269		591	glyoxylate carboligase; Provisional	90.6
cd06586		154	TPP_enzyme_PYR Pyrimidine (PYR) binding domain of	90.56
PRK07710		571	acetolactate synthase catalytic subunit; Reviewed	90.54
TIGR00118		558	acolac_lg acetolactate synthase, large subunit, bi	90.51
PRK06456		572	acetolactate synthase catalytic subunit; Reviewed	90.48
TIGR01504		588	glyox_carbo_lig glyoxylate carboligase. Glyoxylate	90.45
cd02001		157	TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil	90.35
PRK08266		542	hypothetical protein; Provisional	90.3
cd03376		235	TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam	90.26
cd02004		172	TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam	90.08
PRK07979		574	acetolactate synthase 3 catalytic subunit; Validat	90.02
PRK07525		588	sulfoacetaldehyde acetyltransferase; Validated	89.74
PRK06276		586	acetolactate synthase catalytic subunit; Reviewed	89.73
PRK06457		549	pyruvate dehydrogenase; Provisional	89.68
PRK09107		595	acetolactate synthase 3 catalytic subunit; Validat	89.38
PRK08611		576	pyruvate oxidase; Provisional	89.33
PRK09124		574	pyruvate dehydrogenase; Provisional	89.27
cd02010		177	TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto	89.19
cd02014		178	TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv	89.18
PRK07449		568	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1	89.12
PRK07282		566	acetolactate synthase catalytic subunit; Reviewed	88.97
PRK06965		587	acetolactate synthase 3 catalytic subunit; Validat	88.82
PRK07789		612	acetolactate synthase 1 catalytic subunit; Validat	88.66
TIGR03457		579	sulphoacet_xsc sulfoacetaldehyde acetyltransferase	88.43
PRK11864		300	2-ketoisovalerate ferredoxin oxidoreductase subuni	88.39
TIGR00173		432	menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex	88.11
PRK11866		279	2-oxoacid ferredoxin oxidoreductase subunit beta;	88.01
PRK08527		563	acetolactate synthase 3 catalytic subunit; Validat	88.01
PRK06882		574	acetolactate synthase 3 catalytic subunit; Validat	87.98
TIGR03254		554	oxalate_oxc oxalyl-CoA decarboxylase. In a number	87.98
cd02009		175	TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa	87.82
TIGR02720		575	pyruv_oxi_spxB pyruvate oxidase. Members of this f	87.81
PLN02683		356	pyruvate dehydrogenase E1 component subunit beta	87.77
TIGR02177		287	PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta	87.7
PLN02470		585	acetolactate synthase	87.6
PRK06048		561	acetolactate synthase 3 catalytic subunit; Reviewe	87.38
PRK09259		569	putative oxalyl-CoA decarboxylase; Validated	87.21
PRK06725		570	acetolactate synthase 3 catalytic subunit; Validat	86.97
TIGR03845		157	sulfopyru_alph sulfopyruvate decarboxylase, alpha	86.68
PRK05899		624	transketolase; Reviewed	86.59
PRK06546		578	pyruvate dehydrogenase; Provisional	86.49
PRK08979		572	acetolactate synthase 3 catalytic subunit; Validat	86.38
PRK11865		299	pyruvate ferredoxin oxidoreductase subunit beta; P	86.28
PRK12474		518	hypothetical protein; Provisional	86.17
PRK08327		569	acetolactate synthase catalytic subunit; Validated	86.16
PF02776		172	TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter	86.08
PRK07418		616	acetolactate synthase 3 catalytic subunit; Reviewe	85.71
CHL00099		585	ilvB acetohydroxyacid synthase large subunit	85.67
TIGR00204		617	dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s	85.53
TIGR00232		653	tktlase_bact transketolase, bacterial and yeast. T	85.5
PRK12571		641	1-deoxy-D-xylulose-5-phosphate synthase; Provision	84.72
cd07035		155	TPP_PYR_POX_like Pyrimidine (PYR) binding domain o	84.67
smart00861		168	Transket_pyr Transketolase, pyrimidine binding dom	84.45
PRK11892		464	pyruvate dehydrogenase subunit beta; Provisional	84.44
PLN02225		701	1-deoxy-D-xylulose-5-phosphate synthase	83.61
PF02775		153	TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter	83.59
PRK09212		327	pyruvate dehydrogenase subunit beta; Validated	83.43
PRK05444		580	1-deoxy-D-xylulose-5-phosphate synthase; Provision	83.23
cd02003		205	TPP_IolD Thiamine pyrophosphate (TPP) family, IolD	83.14
PRK08273		597	thiamine pyrophosphate protein; Provisional	82.98
COG3958		312	Transketolase, C-terminal subunit [Carbohydrate tr	82.87
cd00568		168	TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa	82.34
PRK08659		376	2-oxoglutarate ferredoxin oxidoreductase subunit a	81.72
cd02013		196	TPP_Xsc_like Thiamine pyrophosphate (TPP) family,	81.7
PRK12315		581	1-deoxy-D-xylulose-5-phosphate synthase; Provision	81.52
PLN02582		677	1-deoxy-D-xylulose-5-phosphate synthase	81.24
PRK11867		286	2-oxoglutarate ferredoxin oxidoreductase subunit b	81.17
cd02012		255	TPP_TK Thiamine pyrophosphate (TPP) family, Transk	80.86
PLN02573		578	pyruvate decarboxylase	80.83
cd03375		193	TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o	80.8
cd07034		160	TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi	80.76
cd02015		186	TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet	80.64
PLN02980		1655	2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi	80.33

>COG0021 TktA Transketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=2.3e-143  Score=1186.91  Aligned_cols=660  Identities=59%  Similarity=0.962  Sum_probs=631.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhhchhcCCCCCCCCCCCeEEEeCCCccHHHHHHHHHcCC
Q 004509           85 AALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGY  164 (748)
Q Consensus        85 ~~~l~~la~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~I~s~GH~~~~~Ya~~~l~G~  164 (748)
                      .++.+++++.||.++++++.+|++||||.+||++||..+||..+|++||+||+|+||||||||.||+++++|++++|+||
T Consensus         3 ~~~~~~~~naiR~Ls~davqkAnSGHPG~pmG~A~ia~~L~~~~l~~nP~nP~W~nRDRFVLSaGHgSmllYsllhl~Gy   82 (663)
T COG0021           3 MKIDKLLANAIRFLSMDAVQKANSGHPGAPMGAADIAYVLWTRFLKHNPDNPKWINRDRFVLSAGHGSMLLYSLLHLTGY   82 (663)
T ss_pred             chHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCccEEecCCchhHHHHHHHHHccC
Confidence            35678899999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCHHHHhhhhhcCCCCCCCCCCCCCCccccccchhhHhHHHHHHHHHHHHHhhhhcCCCCCCcCCcEEEEEEcchhcc
Q 004509          165 DSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQM  244 (748)
Q Consensus       165 ~~~~~~~l~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~~~~~~~~~~~~~~~~~~~v~~iiGDG~~~  244 (748)
                      . ++.|||++|||++|++||||++..+|||+.+||+||||++.|||||||+++++++||+|++++.|++|||++||||+|
T Consensus        83 ~-ls~edLk~FRQ~~SkTpGHPE~~~t~GVe~TTGPLGQGianAVGmAlAe~~La~~fn~~g~~ivdh~tYvl~GDGclm  161 (663)
T COG0021          83 D-LSLEDLKNFRQLGSKTPGHPEYGHTPGVEATTGPLGQGLANAVGMALAEKHLAALFNRPGFDIVDHYTYVLVGDGCLM  161 (663)
T ss_pred             C-CCHHHHHhhccCCCCCCCCCCcCCCCCeEeccCccchhHHHHHHHHHHHHHHHhhhCCCCCccccceEEEEecCchHh
Confidence            5 899999999999999999999989999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHcCCCcEEEEEECCCCcccccccccccccHHHHHhhCCcEEEEEccCCCCHHHHHHHHHHHHhcCCCC
Q 004509          245 EGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKP  324 (748)
Q Consensus       245 eG~~~Eal~~A~~~~L~~li~Ivd~N~~~i~~~~~~~~~~~~~~~~~a~G~~~~~v~dG~~D~~~l~~al~~a~~~~~~P  324 (748)
                      ||+++||+.+|++++|++||+|+|+|+++|++.+...+.+|+.+||++|||+++.++||| |+++|.+|+++|+...+||
T Consensus       162 EGvs~EA~slAG~l~L~kLIvlyD~N~IsiDG~~~~~f~ed~~~RfeAyGW~vi~~~DG~-D~e~I~~Ai~~Ak~~~dkP  240 (663)
T COG0021         162 EGVSHEAASLAGHLKLGKLIVLYDSNDISIDGDTSLSFTEDVAKRFEAYGWNVIRVIDGH-DLEAIDKAIEEAKASTDKP  240 (663)
T ss_pred             cccHHHHHHHHhhcCCCcEEEEEeCCCceeccCcccccchhHHHHHHhcCCeEEEecCCC-CHHHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999999999999999999999999999999999777999 9999999999999877899


Q ss_pred             EEEEEEeeeccCCCCCCCCccccCCcCchhhHHHHHHhcCCCCCCCCCchhHHHHHHHHHhhhhhhHHHHHHHHHHHHhh
Q 004509          325 TLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKK  404 (748)
Q Consensus       325 ~vI~~~T~kg~G~~~~~~~~~~H~~~~~~~e~~~~~~~~~~~~~~~~v~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  404 (748)
                      ++|+|+|++|+|.++++++.++||.||.++++++++++++|+.++|.||++++..|+...+++...+++|++.|.+|.++
T Consensus       241 tlI~~kTiIG~Gsp~kegt~~~HGapLg~~ev~~~k~~lgw~~~~F~vp~ev~~~~~~~~~~g~~~~~~W~~~~~~y~~~  320 (663)
T COG0021         241 TLIIVKTIIGKGSPNKEGTHKVHGAPLGEEEVAAAKKALGWEPEPFEVPEEVYAAFRAVEERGAKAEAAWNELFAAYKKK  320 (663)
T ss_pred             eEEEEEeeeecCCCCcCCCccccCCCCCHHHHHHHHHHhCCCCCceecCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhh
Confidence            99999999999999998899999999999999999999999888899999999999965668889999999999999999


Q ss_pred             CHHHHHHHHHHhcCCCCCcccccCCCCCCCCcchhHHHHHHHHHHHHHHhCCCEEEEecCCCCCccccccccccccccCC
Q 004509          405 YPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTP  484 (748)
Q Consensus       405 ~p~~~~~~~~~l~~~~p~~~~~~~p~~~~~~~~~~~r~a~~~~L~~l~~~~p~vv~~saDl~~s~~~~~k~~~~f~~~~~  484 (748)
                      +|+++++|++++++++|..|...+|.+.......++|++++++|+.+++..|+++.+||||++|+++.+++..+|..+.|
T Consensus       321 ~Pe~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~~ATR~as~~~L~~l~~~~p~l~GGSADLa~Sn~T~~~~~~~~~~~~~  400 (663)
T COG0021         321 YPELAAEFERRLNGELPANWAAFLPKFEANGKSIATRKASGKALNALAKKLPELIGGSADLAPSNLTKISGSGDFSPENY  400 (663)
T ss_pred             ChHHHHHHHHHhcccCchhHHHhhhhhcccccccchHHHHHHHHHHHHhhCccccccCcccccCccccccccCCCCCCCC
Confidence            99999999999999999999888998876545689999999999999999999999999999999998888788876689


Q ss_pred             CCCccccccchHHHHHHHHHHHhcCCCCccEEEeehhHHHHHHHHHHHhhccCCCeEEEEecCCCccCCCCCCCCChhhh
Q 004509          485 EERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHL  564 (748)
Q Consensus       485 p~R~id~GIaE~~~vg~AaGlA~~G~~~~Piv~~f~~F~~r~~dqIr~~a~~~~pVi~v~t~~g~~~g~dG~THq~~edi  564 (748)
                      ++|+|.+||+|++|.++++|||++|. ++||..||..|.+|++++||++|+|++||++|.|||++++|+||||||++|++
T Consensus       401 ~gr~i~~GVREf~M~AimNGialhGg-~~pyggTFlvFsdY~r~AiRlaALm~l~~~~V~THDSIgvGEDGPTHqPiEqL  479 (663)
T COG0021         401 AGRYIHFGVREFAMAAIMNGIALHGG-FIPYGGTFLVFSDYARPAVRLAALMGLPVIYVFTHDSIGVGEDGPTHQPVEQL  479 (663)
T ss_pred             CCCeeEEeeHHHHHHHHHHhHHHhcC-ceeecceehhhHhhhhHHHHHHHhcCCCeEEEEecCceecCCCCCCCCcHHHH
Confidence            99999999999999999999999996 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCcEEEeeCCHHHHHHHHHHHHHcCCCcEEEEEcCCCCCCCCCCCccccccceeEEecCCCCCCCCEEEEEeCh
Q 004509          565 ASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGS  644 (748)
Q Consensus       565 a~lr~iPnl~V~~Psd~~e~~~~l~~a~~~~~~P~~irl~r~~~~~~~~~~~~~~~~G~~~v~~~~~~~g~dvtlva~G~  644 (748)
                      +.||+|||+.|++|||++|++.+++.|+.+.++|++|+++|+++|.++.++.+.+..|+|++.+.+ +..+|++|||+|+
T Consensus       480 a~LRaiPN~~V~RPaD~~Et~~aw~~Al~~~~gPt~LiltRQnlp~l~~t~~~~~~kGaYvl~~~~-~~~pd~iliAtGS  558 (663)
T COG0021         480 ASLRAIPNLSVIRPADANETAAAWKYALERKDGPTALILTRQNLPVLERTDLEGVAKGAYVLKDSG-GEDPDVILIATGS  558 (663)
T ss_pred             HHhhccCCceeEecCChHHHHHHHHHHHhcCCCCeEEEEecCCCCccCCCccccccCccEEEeecC-CCCCCEEEEeccc
Confidence            999999999999999999999999999987799999999999999998877778999999998852 1148999999999


Q ss_pred             hHHHHHHHHHHHHhCCCcEEEEecCChhhHHHHHHHHhhhhccCCCceEEEEccccccCcchhhcCCccEEeeCcCCCCC
Q 004509          645 ELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASA  724 (748)
Q Consensus       645 ~v~~al~Aa~~L~~~Gi~v~VId~~~l~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~v~~~~~~ig~d~f~~~G  724 (748)
                      +|++|++|++.|+++|+.++||+|+|+++||+|..+|+++|++.+...+|.+|.+...||.+|++.....||++.|+.||
T Consensus       559 EV~lAv~Aa~~L~~~~~~vrVVS~P~~~~fe~Q~~~Y~~~vL~~~v~~rvaiEa~~~~~W~ky~g~~g~~ig~~~FG~Sa  638 (663)
T COG0021         559 EVELAVEAAKELEAEGIKVRVVSMPSFELFEKQDEEYRESVLPGAVTARVAIEAGSALGWYKYVGLDGAVIGMDSFGASA  638 (663)
T ss_pred             HHHHHHHHHHHHHhcCCceEEEeccchHHHHcCCHHHHHhhccCCccceEEEEeccccchhhhcCCCCcEEeeccCcCCC
Confidence            99999999999998889999999999999999999999999998876569999999999999998778899999999999


Q ss_pred             CHHHHHHHhCCCHHHHHHHHHHhC
Q 004509          725 PAGKIYKEFGITAEAVITAAKEVC  748 (748)
Q Consensus       725 ~~~~l~~~~gl~~e~I~~~i~~ll  748 (748)
                      +.++|+++||+|+|.|++++++++
T Consensus       639 p~~~l~~~fGft~e~vv~~~~~~l  662 (663)
T COG0021         639 PGDELFKEFGFTVENVVAKAKSLL  662 (663)
T ss_pred             CHHHHHHHhCCCHHHHHHHHHHhh
Confidence            999999999999999999999875

>PRK12754 transketolase; Reviewed	Back alignment and domain information

>PRK12753 transketolase; Reviewed	Back alignment and domain information

>PLN02790 transketolase	Back alignment and domain information

>TIGR00232 tktlase_bact transketolase, bacterial and yeast	Back alignment and domain information

>PTZ00089 transketolase; Provisional	Back alignment and domain information

>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK05899 transketolase; Reviewed	Back alignment and domain information

>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]	Back alignment and domain information

>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional	Back alignment and domain information

>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase	Back alignment and domain information

>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed	Back alignment and domain information

>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type	Back alignment and domain information

>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2	Back alignment and domain information

>PRK05261 putative phosphoketolase; Provisional	Back alignment and domain information

>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG2609 AceE Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]	Back alignment and domain information

>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E	Back alignment and domain information

>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	Back alignment and domain information

>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated	Back alignment and domain information

>PRK11892 pyruvate dehydrogenase subunit beta; Provisional	Back alignment and domain information

>PLN02683 pyruvate dehydrogenase E1 component subunit beta	Back alignment and domain information

>PRK09212 pyruvate dehydrogenase subunit beta; Validated	Back alignment and domain information

>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional	Back alignment and domain information

>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	Back alignment and domain information

>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed	Back alignment and domain information

>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis	Back alignment and domain information

>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B	Back alignment and domain information

>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component	Back alignment and domain information

>KOG0524 consensus Pyruvate dehydrogenase E1, beta subunit [Energy production and conversion]	Back alignment and domain information

>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	Back alignment and domain information

>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2	Back alignment and domain information

>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins	Back alignment and domain information

>COG3957 Phosphoketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>smart00861 Transket_pyr Transketolase, pyrimidine binding domain	Back alignment and domain information

>KOG0525 consensus Branched chain alpha-keto acid dehydrogenase E1, beta subunit [Energy production and conversion]	Back alignment and domain information

>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O	Back alignment and domain information

>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	Back alignment and domain information

>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed	Back alignment and domain information

>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex	Back alignment and domain information

>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	Back alignment and domain information

>PLN02374 pyruvate dehydrogenase (acetyl-transferring)	Back alignment and domain information

>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha	Back alignment and domain information

>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>KOG0225 consensus Pyruvate dehydrogenase E1, alpha subunit [Energy production and conversion]	Back alignment and domain information

>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC)	Back alignment and domain information

>PF09364 XFP_N: XFP N-terminal domain; InterPro: IPR018970 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria	Back alignment and domain information

>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor	Back alignment and domain information

>KOG1182 consensus Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Energy production and conversion]	Back alignment and domain information

>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL)	Back alignment and domain information

>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit	Back alignment and domain information

>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv	Back alignment and domain information

>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins	Back alignment and domain information

>PRK06163 hypothetical protein; Provisional	Back alignment and domain information

>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase)	Back alignment and domain information

>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS	Back alignment and domain information

>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc)	Back alignment and domain information

>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl)	Back alignment and domain information

>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>PF02780 Transketolase_C: Transketolase, C-terminal domain; InterPro: IPR005476 Transketolase 2	Back alignment and domain information

>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC)	Back alignment and domain information

>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation	Back alignment and domain information

>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC)	Back alignment and domain information

>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit	Back alignment and domain information

>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions	Back alignment and domain information

>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase	Back alignment and domain information

>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE)	Back alignment and domain information

>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD)	Back alignment and domain information

>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	Back alignment and domain information

>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]	Back alignment and domain information

>PRK12474 hypothetical protein; Provisional	Back alignment and domain information

>TIGR02418 acolac_catab acetolactate synthase, catabolic	Back alignment and domain information

>PRK06154 hypothetical protein; Provisional	Back alignment and domain information

>PRK07586 hypothetical protein; Validated	Back alignment and domain information

>PRK08266 hypothetical protein; Provisional	Back alignment and domain information

>TIGR01504 glyox_carbo_lig glyoxylate carboligase	Back alignment and domain information

>PRK09124 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK06965 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	Back alignment and domain information

>PRK07524 hypothetical protein; Provisional	Back alignment and domain information

>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family	Back alignment and domain information

>PRK09107 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07064 hypothetical protein; Provisional	Back alignment and domain information

>PRK08979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK06546 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed	Back alignment and domain information

>PRK05858 hypothetical protein; Provisional	Back alignment and domain information

>PRK08611 pyruvate oxidase; Provisional	Back alignment and domain information

>PRK06112 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK07092 benzoylformate decarboxylase; Reviewed	Back alignment and domain information

>PRK06456 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK06466 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PLN02573 pyruvate decarboxylase	Back alignment and domain information

>PRK08322 acetolactate synthase; Reviewed	Back alignment and domain information

>PLN02470 acetolactate synthase	Back alignment and domain information

>PRK08527 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06457 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK08199 thiamine pyrophosphate protein; Validated	Back alignment and domain information

>TIGR02720 pyruv_oxi_spxB pyruvate oxidase	Back alignment and domain information

>PRK11269 glyoxylate carboligase; Provisional	Back alignment and domain information

>PRK08617 acetolactate synthase; Reviewed	Back alignment and domain information

>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase	Back alignment and domain information

>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK07710 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK08273 thiamine pyrophosphate protein; Provisional	Back alignment and domain information

>CHL00099 ilvB acetohydroxyacid synthase large subunit	Back alignment and domain information

>PRK06882 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06725 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK08155 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type	Back alignment and domain information

>PRK06276 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK09259 putative oxalyl-CoA decarboxylase; Validated	Back alignment and domain information

>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase	Back alignment and domain information

>PRK07282 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK07525 sulfoacetaldehyde acetyltransferase; Validated	Back alignment and domain information

>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family	Back alignment and domain information

>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit	Back alignment and domain information

>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways	Back alignment and domain information

>PRK07789 acetolactate synthase 1 catalytic subunit; Validated	Back alignment and domain information

>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	Back alignment and domain information

>PRK08327 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed	Back alignment and domain information

>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated	Back alignment and domain information

>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated	Back alignment and domain information

>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only]	Back alignment and domain information

>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed	Back alignment and domain information

>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes	Back alignment and domain information

>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family	Back alignment and domain information

>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated	Back alignment and domain information

>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit	Back alignment and domain information

>KOG0451 consensus Predicted 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding	Back alignment and domain information

>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>PRK09627 oorA 2-oxoglutarate-acceptor oxidoreductase subunit OorA; Reviewed	Back alignment and domain information

>COG3962 Acetolactate synthase [Amino acid transport and metabolism]	Back alignment and domain information

>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]	Back alignment and domain information

>KOG1184 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]	Back alignment and domain information

>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]	Back alignment and domain information

>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>TIGR03710 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha subunit	Back alignment and domain information

>PF03894 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; InterPro: IPR005593 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria	Back alignment and domain information

>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>KOG0450 consensus 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]	Back alignment and domain information

>COG3960 Glyoxylate carboligase [General function prediction only]	Back alignment and domain information

>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric	Back alignment and domain information

>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion]	Back alignment and domain information

>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion]	Back alignment and domain information

>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion]	Back alignment and domain information

>COG0674 PorA Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion]	Back alignment and domain information

>COG1165 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	Back alignment and domain information

>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase	Back alignment and domain information

>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains	Back alignment and domain information

>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins	Back alignment and domain information

>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins	Back alignment and domain information

>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes	Back alignment and domain information

>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated	Back alignment and domain information

>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit	Back alignment and domain information

>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins	Back alignment and domain information

>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	Back alignment and domain information

>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX	Back alignment and domain information

>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated	Back alignment and domain information

>cd01460 vWA_midasin VWA_Midasin: Midasin is a member of the AAA ATPase family	Back alignment and domain information

>PRK07092 benzoylformate decarboxylase; Reviewed	Back alignment and domain information

>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins	Back alignment and domain information

>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric	Back alignment and domain information

>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways	Back alignment and domain information

>TIGR02418 acolac_catab acetolactate synthase, catabolic	Back alignment and domain information

>PRK05858 hypothetical protein; Provisional	Back alignment and domain information

>PRK08199 thiamine pyrophosphate protein; Validated	Back alignment and domain information

>PF09363 XFP_C: XFP C-terminal domain; InterPro: IPR018969 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria	Back alignment and domain information

>PRK06466 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07586 hypothetical protein; Validated	Back alignment and domain information

>PRK08155 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK07064 hypothetical protein; Provisional	Back alignment and domain information

>PRK07524 hypothetical protein; Provisional	Back alignment and domain information

>PRK08322 acetolactate synthase; Reviewed	Back alignment and domain information

>PRK06112 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins	Back alignment and domain information

>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed	Back alignment and domain information

>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2	Back alignment and domain information

>PRK08617 acetolactate synthase; Reviewed	Back alignment and domain information

>PRK11269 glyoxylate carboligase; Provisional	Back alignment and domain information

>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes	Back alignment and domain information

>PRK07710 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type	Back alignment and domain information

>PRK06456 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>TIGR01504 glyox_carbo_lig glyoxylate carboligase	Back alignment and domain information

>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase)	Back alignment and domain information

>PRK08266 hypothetical protein; Provisional	Back alignment and domain information

>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	Back alignment and domain information

>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL)	Back alignment and domain information

>PRK07979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07525 sulfoacetaldehyde acetyltransferase; Validated	Back alignment and domain information

>PRK06276 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK06457 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK09107 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK08611 pyruvate oxidase; Provisional	Back alignment and domain information

>PRK09124 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation	Back alignment and domain information

>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions	Back alignment and domain information

>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	Back alignment and domain information

>PRK07282 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK06965 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07789 acetolactate synthase 1 catalytic subunit; Validated	Back alignment and domain information

>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase	Back alignment and domain information

>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase	Back alignment and domain information

>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK08527 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06882 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase	Back alignment and domain information

>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD)	Back alignment and domain information

>TIGR02720 pyruv_oxi_spxB pyruvate oxidase	Back alignment and domain information

>PLN02683 pyruvate dehydrogenase E1 component subunit beta	Back alignment and domain information

>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family	Back alignment and domain information

>PLN02470 acetolactate synthase	Back alignment and domain information

>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK09259 putative oxalyl-CoA decarboxylase; Validated	Back alignment and domain information

>PRK06725 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit	Back alignment and domain information

>PRK05899 transketolase; Reviewed	Back alignment and domain information

>PRK06546 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK08979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK12474 hypothetical protein; Provisional	Back alignment and domain information

>PRK08327 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>CHL00099 ilvB acetohydroxyacid synthase large subunit	Back alignment and domain information

>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>TIGR00232 tktlase_bact transketolase, bacterial and yeast	Back alignment and domain information

>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins	Back alignment and domain information

>smart00861 Transket_pyr Transketolase, pyrimidine binding domain	Back alignment and domain information

>PRK11892 pyruvate dehydrogenase subunit beta; Provisional	Back alignment and domain information

>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>PRK09212 pyruvate dehydrogenase subunit beta; Validated	Back alignment and domain information

>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv	Back alignment and domain information

>PRK08273 thiamine pyrophosphate protein; Provisional	Back alignment and domain information

>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor	Back alignment and domain information

>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated	Back alignment and domain information

>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc)	Back alignment and domain information

>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed	Back alignment and domain information

>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	Back alignment and domain information

>PLN02573 pyruvate decarboxylase	Back alignment and domain information

>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	Back alignment and domain information

>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins	Back alignment and domain information

>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS	Back alignment and domain information

>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding	Back alignment and domain information

Homologous Structure Templates