Citrus Sinensis ID: 004593

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740---
MMSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDAQLSTMVAEQIEQAQTGLESLALSQNTINQLRENFISIERYCQECQTLIENHNQIKLLSNARNNLNTTLKDVEGMMSISVEAAEARDSLGDDKELVNTYERLTALDGKRRFALAAAASHIDEVGRLREYFEDVDQTWETFEKTLWTHISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGDGVMATIANPRRSAKKSTTAMASSKNLTQQKLKVQGKHYKDKCYEKIRKTVEGRFNKLLTELVFEDLKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNAYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAEPASEIGLEPLCAIINNNLRCYDLAMELSTSTIESLPPNYAEQEALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFVEACLEETIVLFIDHLLSQKNYIKEITIERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKEIVQECKEIYENSLINGNPPKPGFVFPRVKCLSASKGYDYLWRKLT
cccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHcc
ccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccHHHEEEEEEHHHHHHHHHHHHHHHHHHcccHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcHEEEEEEcccHHHHHHHHccHHHHcccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccEEEcEEEEEEcccccccHHHHcc
MMSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDAQLSTMVAEQIEQAQTGLESLALSQNTINQLRENFISIERYCQECQTLIENHNQIKLLSNARNNLNTTLKDVEGMMSISVEAAEArdslgddkeLVNTYERLTALDGKRRFALAAAASHIDEVGRLREYFEDVDQTWETFEKTLWTHISNFyklskespQTLVRALRVVEMQEILDQQLAEEAAEaegdgvmatianprrsakkstTAMASSKNLTQQKLKVQGKHYKDKCYEKIRKTVEGRFNKLLTELVFEDLKAALEETRTiggelgdiydyvapcfpprYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDnliglgvdeSLAQVCsesgamdpLMNAYVERMQATTKKWYLNILdadkvqppkrtedgklytpAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQrlaepaseiglePLCAIINNNLRCYDLAMELStstieslppnyaEQEALFHLISVIFDDPEVQQLFLKLYSKewsdgqvteyilptfsdYFADVKMFVEERSFRRFVEACLEETIVLFIDHLLSQKNYIKEITIERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVlehqpdcppEVVERLVALREAIPRKDAKEIVQECKEIYEnslingnppkpgfvfprvkclsaskgyDYLWRKLT
mmsedlgvEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDAQLSTMVAEQIEQAQTGLESLALSQNTINQLRENFISIERYCQECQTLIENHNQIKLLSNARNNLNTTLKDVEGMMSISVEAAeardslgddkelVNTYERLTALDGKRRFALAAAASHIDEVGRLREYFEDVDQTWETFEKTLWTHISNfyklskespQTLVRALRVVEMQEILDQQLAEEAAEAEGDGVMATIANPRRSAKKsttamassknltqqklkvqgkhykdkcYEKIRKTVEGRFNKLLTELVFEDLKAALEETrtiggelgdiYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNAYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAEPASEIGLEPLCAIINNNLRCYDLAMELSTSTIESLPPNYAEQEALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFVEACLEETIVLFidhllsqkNYIKEITIERMREDEEAIIEAFreyvsvnkveSKVRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREaiprkdakeIVQECKEIYEnslingnppkpGFVFPRVKclsaskgydylwrklt
MMSEDLGveakeaavrevakLLTLPDQLQFIGDMKADYIARQQANDAQLSTMVAEQIEQAQTGLESLALSQNTINQLRENFISIERYCQECQTLIENHNQIKLLSNARNNLNTTLKDVEGMMSISVEAAEARDSLGDDKELVNTYERLTALDGKRRFALAAAASHIDEVGRLREYFEDVDQTWETFEKTLWTHISNFYKLSKESPQTLVRALRVVEMQEILDQQLaeeaaeaeGDGVMATIANPRRsakksttamasskNLTQQKLKVQGKHYKDKCYEKIRKTVEGRFNKLLTELVFEDLKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNAYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAEPASEIGLEPLCAIINNNLRCYDLAMELSTSTIESLPPNYAEQEALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFVEACLEETIVLFIDHLLSQKNYIKEITIERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKEIVQECKEIYENSLINGNPPKPGFVFPRVKCLSASKGYDYLWRKLT
**************VREVAKLLTLPDQLQFIGDMKADYIARQQ*******************GLESLALSQNTINQLRENFISIERYCQECQTLIENHNQIKLLSNARNNLNTTLKDV*********************ELVNTYERLTALDGKRRFALAAAASHIDEVGRLREYFEDVDQTWETFEKTLWTHISNFYKLSKESPQTLVRALRVVEMQEIL************************************************GKHYKDKCYEKIRKTVEGRFNKLLTELVFEDLKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLA******************RMQATTKKWYLNILDADKV********GKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAEPASEIGLEPLCAIINNNLRCYDLAMELSTSTIESLPPNYAEQEALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFVEACLEETIVLFIDHLLSQKNYIKEITIERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKEIVQECKEIYENSLINGNPPKPGFVFPRVKCLSASKGYDYLWR***
*************AVREVAKLLTLPDQLQFIGD****************STMVAE*IEQ*QTGLESLALSQNTINQLRENFISIERYCQECQT*IENHNQIKLLSNARNNLNTTLKDVEGMMSISVEAAEARDSLGDDKELVNTYERLTALDGKRRF****************EYFEDVDQTWETFEKTLWTHISNFYKLSKESPQTLVRALRVVEMQEILDQQ*********************RSAKKSTTAMASSKNLTQQKLKVQGKHYKDKCYEKIRKTVEGRFNKLLTELVFEDLKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLG*************AMDPLMNAYVERMQATTKKWYLNILDADKV**P*RTEDGKLYTPAAVDLFRILGEQV********DVMLYRISLAIIQVMIDFQAAERQRLAEPASEIGLEPLCAIINNNLRCYD*****************AEQEALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFVEACLEETIVLFIDHLLSQ*********ERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKE**************************RVK**S**KGYDYLWRKLT
*********AKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDAQLSTMVAEQIEQAQTGLESLALSQNTINQLRENFISIERYCQECQTLIENHNQIKLLSNARNNLNTTLKDVEGMMSISVEAAEARDSLGDDKELVNTYERLTALDGKRRFALAAAASHIDEVGRLREYFEDVDQTWETFEKTLWTHISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGDGVMATIANP***************NLTQQKLKVQGKHYKDKCYEKIRKTVEGRFNKLLTELVFEDLKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNAYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAEPASEIGLEPLCAIINNNLRCYDLAMELSTSTIESLPPNYAEQEALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFVEACLEETIVLFIDHLLSQKNYIKEITIERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKEIVQECKEIYENSLINGNPPKPGFVFPRVKCLSASKGYDYLWRKLT
*MSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDAQLSTMVAEQIEQAQTGLESLALSQNTINQLRENFISIERYCQECQTLIENHNQIKLLSNARNNLNTTLKDVEGMMSISVEAAEARDSLGDDKELVNTYERLTALDGKRRFALAAAASHIDEVGRLREYFEDVDQTWETFEKTLWTHISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEG*****************T*AMASS**LTQQKLKVQGKHYKDKCYEKIRKTVEGRFNKLLTELVFEDLKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNAYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAEPASEIGLEPLCAIINNNLRCYDLAMELSTSTIESLPPNYAEQEALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFVEACLEETIVLFIDHLLSQKNYIKEITIERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKEIVQECKEIYENSLINGNPPKPGFVFPRVKCLSASKGYDYLWR*LT
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MMSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDAQLSTMVAEQIEQAQTGLESLALSQNTINQLRENFISIERYCQECQTLIENHNQIKLLSNARNNLNTTLKDVEGMMSISVEAAEARDSLGDDKELVNTYERLTALDGKRRFALAAAASHIDEVGRLREYFEDVDQTWETFEKTLWTHISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGDGVMATIANPRRSAKKSTTAMASSKNLTQQKLKVQGKHYKDKCYEKIRKTVEGRFNKLLTELVFEDLKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNAYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAEPASEIGLEPLCAIINNNLRCYDLAMELSTSTIESLPPNYAEQEALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFVEACLEETIVLFIDHLLSQKNYIKEITIERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKEIVQECKEIYENSLINGNPPKPGFVFPRVKCLSASKGYDYLWRKLT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query743 2.2.26 [Sep-21-2011]
Q54BP6783 Exocyst complex component yes no 0.948 0.900 0.236 1e-51
Q19262796 Exocyst complex component yes no 0.865 0.807 0.213 3e-18
Q0V8C2745 Exocyst complex component yes no 0.717 0.715 0.206 8e-14
Q62825755 Exocyst complex component yes no 0.713 0.701 0.212 9e-14
Q9V8K2738 Exocyst complex component yes no 0.718 0.723 0.204 3e-13
Q6KAR6755 Exocyst complex component yes no 0.716 0.704 0.208 7e-13
O60645756 Exocyst complex component yes no 0.716 0.703 0.207 7e-13
A2AV37780 Exocyst complex component yes no 0.900 0.857 0.202 1e-12
P32844805 Exocyst complex component yes no 0.573 0.529 0.210 2e-12
O74846752 Exocyst complex component yes no 0.873 0.863 0.207 3e-10
>sp|Q54BP6|EXOC3_DICDI Exocyst complex component 3 OS=Dictyostelium discoideum GN=exoc3 PE=3 SV=1 Back     alignment and function desciption
 Score =  205 bits (522), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 183/774 (23%), Positives = 354/774 (45%), Gaps = 69/774 (8%)

Query: 8   VEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDAQLSTMVAEQIEQAQTGLESL 67
           + A+ AA++++ +  +  D L  + + K   I +++  +AQ+   V  ++E+++ GLE+L
Sbjct: 15  LSAQSAAIKKIEQNFSNIDSLASVTNHKISLIQQKKTIEAQIKNEVHSELEKSKKGLETL 74

Query: 68  ALSQNTINQLRENFISIERYCQECQTLIENHNQIKLLSNARNNLNTTLKDVEGMMSISVE 127
             S N IN++ E+F      C E   LI ++  IK ++  R NL   LK+V+ +++I  +
Sbjct: 75  YKSYNRINRMDESFSDTVELCSETSNLIGHYQLIKKVNTVRVNLINILKEVDRLLTIPEK 134

Query: 128 AAEARDSLGDDKELVNTYERLTALDGKRRFALAAAASHIDEVGRLREYFEDVDQTWETFE 187
           AAE    L DD  L+  + +L  L+   + AL    S+ +E+  ++E F  V +    FE
Sbjct: 135 AAEIEQLLSDDLNLLEIHSKLRELERLHQKALKQFESNFEELEAIKEMFSSVPELSHRFE 194

Query: 188 KTLWTHISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAE---AEGDGV------- 237
             +W  +SN   +++  P  LV+  +++E +++ +Q+  E+ ++      +G+       
Sbjct: 195 NKIWNIVSNSIDIAQIKPAVLVKVAQIIEREKLHEQKQKEKKSQNSLISSEGIHDDDDDD 254

Query: 238 MATIANPRRSAKKSTTAMASSKNLTQQKLKVQG---------KHYKDKCYEKIRKTVEGR 288
             T  N   S K+      +S +       +            +Y D+  E + +++ G+
Sbjct: 255 DDTEVNLNNSNKQQNNENENSSSNNNNNYDINNEDEGYDRNRSNYGDRFLEVLIQSISGK 314

Query: 289 FNKLLTELVFEDLKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQML 348
           F  +       DL   L++   +  EL  + D V  C+PP Y++F   V+ Y  +F  + 
Sbjct: 315 FEPMFLN-SHNDLVQTLKDVNKMVDELFIVMDIVQECYPPSYDLFNFYVDQYHTKFYSLF 373

Query: 349 RLLSDR--------------ANELTNIEILKVTGWVVE-YQDNLIGLGVDESLAQVCSES 393
              S+                  + +  IL +  WVV+ Y  +L  LG+ +    +    
Sbjct: 374 GSFSNLMESSHVNNNYQVVVTKNIPSAHILMLVEWVVKNYSRDLSRLGIQDISPPLL--- 430

Query: 394 GAMDPLMNAYVERMQATTKKWYLNILDADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQI 453
            ++DPL+  Y   ++   ++W  NI++ D    P+   DG+  + A + LF  +  Q+ I
Sbjct: 431 DSLDPLIKIYKMHIKQLMREWCDNIINNDNQNKPEVV-DGQYCSLAPIQLFESVASQLDI 489

Query: 454 VRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAEPASEIGLEPLCAIINNNLRCYDLAME 513
                   ++  +   ++  ++ FQ      L E   EI LE + A +NNN +CYD    
Sbjct: 490 AAATKCQKLVVGVMEEVVSALMYFQVQSITLLQERNHEIKLENVIAYVNNNSKCYD---- 545

Query: 514 LSTSTIESLPPNYAEQEALFHL--------------------ISVIFDDPEVQQLFLKLY 553
             T TI     N  + E + +L                     SVIF D  + +   K Y
Sbjct: 546 -HTQTIVDKVSNILDSEHMGYLDFDPVLEGFLNVSKVATQAISSVIFRD--LDECIHKFY 602

Query: 554 SKEWSDGQVTEYILPTFSDYFA-DVKMFVEERSFRRFVEACLEETIVLFIDHLLSQKNYI 612
           + EW    + + I+ TF DY   D++ ++ E   +R     L+  I   +  L+  KN  
Sbjct: 603 TVEWYQEDLMQPIINTFEDYVTNDIQKYILENYLKRLALLLLDTLIEQLLAQLIGGKNKF 662

Query: 613 KEITIERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVLEH 672
            E T + +  D + +++ F++Y+ ++ V +KV++L D +++ ++ S+D   + + +V+  
Sbjct: 663 NENTYKILSNDCDKLLDFFKKYLRLSVVTAKVQILEDFKQMITS-SIDMVPVYFRSVINF 721

Query: 673 QPDCPPEVVERLVALREAIPRKDAKEIVQECKEIYENSLINGNPPKPGFVFPRV 726
             D    VVE ++  R  I + +  E++ + K I E    +   P  G +F R+
Sbjct: 722 HKDINERVVELVLYQRTDISKSEITEVLGQIKTIVETVHTDPTNPPTG-IFSRM 774
Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Dictyostelium discoideum (taxid: 44689)
>sp|Q19262|EXOC3_CAEEL Exocyst complex component 3 OS=Caenorhabditis elegans GN=sec-6 PE=3 SV=2 Back     alignment and function description
>sp|Q0V8C2|EXOC3_BOVIN Exocyst complex component 3 OS=Bos taurus GN=EXOC3 PE=2 SV=1 Back     alignment and function description
>sp|Q62825|EXOC3_RAT Exocyst complex component 3 OS=Rattus norvegicus GN=Exoc3 PE=1 SV=1 Back     alignment and function description
>sp|Q9V8K2|EXOC3_DROME Exocyst complex component 3 OS=Drosophila melanogaster GN=sec6 PE=2 SV=2 Back     alignment and function description
>sp|Q6KAR6|EXOC3_MOUSE Exocyst complex component 3 OS=Mus musculus GN=Exoc3 PE=1 SV=2 Back     alignment and function description
>sp|O60645|EXOC3_HUMAN Exocyst complex component 3 OS=Homo sapiens GN=EXOC3 PE=1 SV=2 Back     alignment and function description
>sp|A2AV37|EX3L1_DANRE Exocyst complex component 3-like protein OS=Danio rerio GN=exoc3l1 PE=2 SV=1 Back     alignment and function description
>sp|P32844|SEC6_YEAST Exocyst complex component SEC6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC6 PE=1 SV=2 Back     alignment and function description
>sp|O74846|SEC6_SCHPO Exocyst complex component sec6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec6 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query743
225429246756 PREDICTED: exocyst complex component 3 [ 0.997 0.980 0.825 0.0
357469701755 Exocyst complex subunit SEC6 [Medicago t 0.995 0.980 0.811 0.0
356506130756 PREDICTED: exocyst complex component 3-l 0.997 0.980 0.819 0.0
255572385756 exocyst complex component sec6, putative 0.990 0.973 0.835 0.0
224146468758 predicted protein [Populus trichocarpa] 0.997 0.977 0.822 0.0
359486028756 PREDICTED: exocyst complex component 3-l 0.997 0.980 0.820 0.0
356496372756 PREDICTED: exocyst complex component 3-l 0.997 0.980 0.812 0.0
449446355756 PREDICTED: exocyst complex component 3-l 0.997 0.980 0.831 0.0
224135427749 predicted protein [Populus trichocarpa] 0.985 0.977 0.801 0.0
18409922752 protein SEC6 [Arabidopsis thaliana] gi|1 0.991 0.980 0.800 0.0
>gi|225429246|ref|XP_002264732.1| PREDICTED: exocyst complex component 3 [Vitis vinifera] gi|296088092|emb|CBI35451.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1287 bits (3330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/758 (82%), Positives = 691/758 (91%), Gaps = 17/758 (2%)

Query: 1   MMSEDLGVEAKEAAVREVAKLLTLPDQLQFIGDMKADYIARQQANDAQLSTMVAEQIEQA 60
           M+ EDLG+EAKEAAVREVAKLL LP+ LQ I  +KADYI RQQANDAQLSTMVAEQ+EQA
Sbjct: 1   MIVEDLGIEAKEAAVREVAKLLPLPELLQSISSIKADYITRQQANDAQLSTMVAEQVEQA 60

Query: 61  QTGLESLALSQNTINQLRENFISIERYCQECQTLIENHNQIKLLSNARNNLNTTLKDVEG 120
           Q GLES++ SQ TINQLRENF+SIER CQECQ LIENH+QIKLLSN RNNLNTTLKDVEG
Sbjct: 61  QAGLESISSSQKTINQLRENFLSIERLCQECQNLIENHDQIKLLSNVRNNLNTTLKDVEG 120

Query: 121 MMSISVEAAEARDSLGDDKELVNTYERLTALDGKRRFALAAAASHIDEVGRLREYFEDVD 180
           MMSISVEA+EARDSL DDKEL+NTYERLTALDGKRRFALAAAASH +EVGRLREYFEDVD
Sbjct: 121 MMSISVEASEARDSLSDDKELINTYERLTALDGKRRFALAAAASHKEEVGRLREYFEDVD 180

Query: 181 QTWETFEKTLWTHISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGDGVMAT 240
           +TWETFEKTLW HISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEG G MA+
Sbjct: 181 RTWETFEKTLWGHISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGGGTMAS 240

Query: 241 IANPRRSAKKSTTAMASSKNLTQQKLKVQGKHYKDKCYEKIRKTVEGRFNKLLTELVFED 300
           IANPRR+AKKSTTA ASS+NLTQQKLK+QGK YKDKCYE+IRKTVE RFNKLLTELVFED
Sbjct: 241 IANPRRTAKKSTTATASSRNLTQQKLKIQGKDYKDKCYEQIRKTVEQRFNKLLTELVFED 300

Query: 301 LKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTN 360
           LKAALEE R IG ELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRAN+LTN
Sbjct: 301 LKAALEEARMIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANQLTN 360

Query: 361 IEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNAYVERMQATTKKWYLNILD 420
           IEILKVTGWVVEYQDNLIGLGVD+SLAQVCSESGAMDPLMN+YVERMQATTKKWYLNIL+
Sbjct: 361 IEILKVTGWVVEYQDNLIGLGVDDSLAQVCSESGAMDPLMNSYVERMQATTKKWYLNILE 420

Query: 421 ADKVQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAA 480
           ADKVQPPK+TEDGKLYTPAAVDLFRILGEQVQIVR+NSTDVMLYRI+LA+IQVMIDFQAA
Sbjct: 421 ADKVQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRENSTDVMLYRIALAVIQVMIDFQAA 480

Query: 481 ERQRLAEPASEIGLEPLCAIINNNLRCYDLAMELSTSTIESLPPNYAEQ----------- 529
           E++RL EPASEIGLE LCA+INNNLRCYDLA+ELS+ST+E+LP NYAEQ           
Sbjct: 481 EKRRLEEPASEIGLESLCAMINNNLRCYDLALELSSSTLEALPQNYAEQVNFEDTCKGFL 540

Query: 530 ----EALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERS 585
               EA+   +SVIF+DP VQ+L +KLY KEW +GQVTEY++ TF DYF DVKM++EERS
Sbjct: 541 EVAKEAVHQTVSVIFEDPGVQELLVKLYQKEWCEGQVTEYLVATFGDYFMDVKMYIEERS 600

Query: 586 FRRFVEACLEETIVLFIDHLLSQKNYIKEITIERMREDEEAIIEAFREYVSVNKVESKVR 645
           FRRFVEACLEET+V+++DHLL+Q+NYIKE TIERMR DEE I++ FREY+SV+KVE++VR
Sbjct: 601 FRRFVEACLEETVVVYVDHLLTQRNYIKEETIERMRLDEEVILDFFREYISVSKVENRVR 660

Query: 646 VLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKEIVQECKE 705
           +L+D+RELASA S+D F LIYTN+LEHQPDCP EVVE+LV LRE IPRKDAKE+VQECKE
Sbjct: 661 ILSDLRELASAESLDTFTLIYTNILEHQPDCPSEVVEKLVGLREGIPRKDAKEVVQECKE 720

Query: 706 IYENSLINGNPPKPGFVFPRVKCLSASKGYDYLWRKLT 743
           IYENSL+ GNPPK GFVFP+VKCL+ASKG   LWRKLT
Sbjct: 721 IYENSLVGGNPPKAGFVFPKVKCLTASKG--SLWRKLT 756

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357469701|ref|XP_003605135.1| Exocyst complex subunit SEC6 [Medicago truncatula] gi|355506190|gb|AES87332.1| Exocyst complex subunit SEC6 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356506130|ref|XP_003521840.1| PREDICTED: exocyst complex component 3-like [Glycine max] Back     alignment and taxonomy information
>gi|255572385|ref|XP_002527131.1| exocyst complex component sec6, putative [Ricinus communis] gi|223533554|gb|EEF35294.1| exocyst complex component sec6, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224146468|ref|XP_002326016.1| predicted protein [Populus trichocarpa] gi|222862891|gb|EEF00398.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359486028|ref|XP_002268285.2| PREDICTED: exocyst complex component 3-like [Vitis vinifera] gi|298204486|emb|CBI23761.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356496372|ref|XP_003517042.1| PREDICTED: exocyst complex component 3-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|449446355|ref|XP_004140937.1| PREDICTED: exocyst complex component 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224135427|ref|XP_002327215.1| predicted protein [Populus trichocarpa] gi|222835585|gb|EEE74020.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18409922|ref|NP_565026.1| protein SEC6 [Arabidopsis thaliana] gi|15028129|gb|AAK76688.1| unknown protein [Arabidopsis thaliana] gi|22136818|gb|AAM91753.1| unknown protein [Arabidopsis thaliana] gi|332197115|gb|AEE35236.1| protein SEC6 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query743
DICTYBASE|DDB_G0293520783 exoc3 "exocyst complex subunit 0.600 0.569 0.242 1.1e-55
ASPGD|ASPL0000042482759 AN1988 [Emericella nidulans (t 0.627 0.613 0.233 7.4e-22
UNIPROTKB|G4N9X0755 MGG_03235 "Uncharacterized pro 0.621 0.611 0.247 1.2e-20
WB|WBGene00017284796 sec-6 [Caenorhabditis elegans 0.566 0.528 0.209 6e-18
UNIPROTKB|F1NHD9745 EXOC3 "Uncharacterized protein 0.271 0.271 0.199 1.3e-16
ZFIN|ZDB-GENE-030131-5947748 exoc3 "exocyst complex compone 0.274 0.272 0.186 2.7e-16
FB|FBgn0034367738 sec6 "sec6" [Drosophila melano 0.270 0.272 0.225 1.1e-15
UNIPROTKB|Q0V8C2745 EXOC3 "Exocyst complex compone 0.274 0.273 0.181 1.9e-14
RGD|621790755 Exoc3 "exocyst complex compone 0.271 0.267 0.189 4e-13
MGI|MGI:2443972755 Exoc3 "exocyst complex compone 0.271 0.267 0.189 5.1e-13
DICTYBASE|DDB_G0293520 exoc3 "exocyst complex subunit 3" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
 Score = 387 (141.3 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
 Identities = 118/486 (24%), Positives = 228/486 (46%)

Query:   272 HYKDKCYEKIRKTVEGRFNKLLTELVFEDLKAALEETRTIGGELGDIYDYVAPCFPPRYE 331
             +Y D+  E + +++ G+F  +       DL   L++   +  EL  + D V  C+PP Y+
Sbjct:   298 NYGDRFLEVLIQSISGKFEPMFLNS-HNDLVQTLKDVNKMVDELFIVMDIVQECYPPSYD 356

Query:   332 IFQLMVNLYTERFIQML----RLL-SDRANE-----LT-NI---EILKVTGWVVE-YQDN 376
             +F   V+ Y  +F  +      L+ S   N      +T NI    IL +  WVV+ Y  +
Sbjct:   357 LFNFYVDQYHTKFYSLFGSFSNLMESSHVNNNYQVVVTKNIPSAHILMLVEWVVKNYSRD 416

Query:   377 LIGLGVDESLAQVCSESGAMDPLMNAYVERMQATTKKWYLNILDADKVQPPKRTEDGKLY 436
             L  LG+ + ++    +S  +DPL+  Y   ++   ++W  NI++ D    P+   DG+  
Sbjct:   417 LSRLGIQD-ISPPLLDS--LDPLIKIYKMHIKQLMREWCDNIINNDNQNKPE-VVDGQYC 472

Query:   437 TPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAEPASEIGLEP 496
             + A + LF  +  Q+ I        ++  +   ++  ++ FQ      L E   EI LE 
Sbjct:   473 SLAPIQLFESVASQLDIAAATKCQKLVVGVMEEVVSALMYFQVQSITLLQERNHEIKLEN 532

Query:   497 LCAIINNNLRCYD---LAMELSTSTIESLPPNYAEQEALFH------------LISVIFD 541
             + A +NNN +CYD     ++  ++ ++S    Y + + +              + SVIF 
Sbjct:   533 VIAYVNNNSKCYDHTQTIVDKVSNILDSEHMGYLDFDPVLEGFLNVSKVATQAISSVIFR 592

Query:   542 DPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFA-DVKMFVEERSFRRFVEACLEETIVL 600
             D  + +   K Y+ EW    + + I+ TF DY   D++ ++ E   +R     L+  I  
Sbjct:   593 D--LDECIHKFYTVEWYQEDLMQPIINTFEDYVTNDIQKYILENYLKRLALLLLDTLIEQ 650

Query:   601 FIDHLLSQKNYIKEITIERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVD 660
              +  L+  KN   E T + +  D + +++ F++Y+ ++ V +KV++L D +++ ++ S+D
Sbjct:   651 LLAQLIGGKNKFNENTYKILSNDCDKLLDFFKKYLRLSVVTAKVQILEDFKQMITS-SID 709

Query:   661 AFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKEIVQECKEIYENSLINGNPPKPG 720
                + + +V+    D    VVE ++  R  I + +  E++ + K I E    +   P  G
Sbjct:   710 MVPVYFRSVINFHKDINERVVELVLYQRTDISKSEITEVLGQIKTIVETVHTDPTNPPTG 769

Query:   721 FVFPRV 726
              +F R+
Sbjct:   770 -IFSRM 774
GO:0006887 "exocytosis" evidence=IEA
GO:0000145 "exocyst" evidence=IEA
GO:0015031 "protein transport" evidence=IEA
GO:0006810 "transport" evidence=IEA
ASPGD|ASPL0000042482 AN1988 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4N9X0 MGG_03235 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
WB|WBGene00017284 sec-6 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1NHD9 EXOC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5947 exoc3 "exocyst complex component 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0034367 sec6 "sec6" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q0V8C2 EXOC3 "Exocyst complex component 3" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|621790 Exoc3 "exocyst complex component 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2443972 Exoc3 "exocyst complex component 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query743
pfam06046557 pfam06046, Sec6, Exocyst complex component Sec6 1e-116
COG5173742 COG5173, SEC6, Exocyst complex subunit SEC6 [Intra 2e-29
>gnl|CDD|218871 pfam06046, Sec6, Exocyst complex component Sec6 Back     alignment and domain information 
 Score =  360 bits (925), Expect = e-116
 Identities = 147/587 (25%), Positives = 258/587 (43%), Gaps = 66/587 (11%)

Query: 176 FEDVDQTWETFEKTLWTHISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGD 235
           F  +D   E F+K LW  I N  +L +E P+ LVRALR+VE +E  D++        + +
Sbjct: 1   FSKLDGLIEKFDKLLWEIIRNLIELVREGPELLVRALRIVEREEKEDEKAEALQEATKDE 60

Query: 236 GVMATIANPRRSAKKSTTAMASSKNLTQQKLKVQGKHYKDKCYEKIRKTVEGRFNKLLTE 295
                     R                        + YKDK  + + ++VE RF +    
Sbjct: 61  NNDDAGRFRGRP-----------------------RGYKDKFLDALEESVEERFEECRER 97

Query: 296 LV-FEDLKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDR 354
            +   DL   LE  R +  +L  + D +AP FPP Y IF+  VN+Y       L+ L+D 
Sbjct: 98  FLGDPDLVQVLENLRWVFEDLIVVKDLLAPLFPPHYNIFKTYVNIYHNALHDFLQELAD- 156

Query: 355 ANELTNIEILKVTGWVVEYQDNLIGLGVD---ESLAQVCSESGAMDPLMNAYVERMQATT 411
             EL   +IL +  W   Y   +  LG+      L  +  +    + L + Y+  +    
Sbjct: 157 -PELEAEDILAILSWDNTYYSFMGKLGLAPDKSDLEPLLLDEL-KEELEDDYLSLIVNKV 214

Query: 412 KKWYLNILDADKV-----QPPKRTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRI 466
           ++W  N+L+ +K      QPP   EDG  +TP  VD+F+++ EQ+ +  ++    +L  +
Sbjct: 215 REWMDNLLETEKKEFVAEQPPDIDEDGYYHTPLPVDVFQMIEEQLDVAAESLQAKILVGV 274

Query: 467 SLAIIQVMIDFQAAERQRLAEPAS-----EIGLEPLCAIINNNLRCYDLAMELSTSTIES 521
              + + +   Q A  + L E           +E L A+ N+ L+C D A  L    +  
Sbjct: 275 LEELSKFLRSRQDAWIELLEEELRKYMSVPGLVEYLIALANDQLKCADYASSLLQKYLPK 334

Query: 522 LPPNYAEQ-----------------EALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTE 564
           +   Y E+                 E +  L+ +IF+D  +Q    KL++K+W  G++ E
Sbjct: 335 VSSKYEERITEEFEELLDGFVDLSKECISLLLELIFND--LQPALSKLFTKKWYTGELME 392

Query: 565 YILPTFSDYFADVKMFVEERSFRRFVEACLEETIVLFIDHLLSQK-----NYIKEITIER 619
            I+ T  DY  D + ++    F+  +E  L+E +V ++  L +++        ++   E+
Sbjct: 393 QIVETIEDYLNDYQEYLHPPLFQELLEELLDELVVEYLRALRNKRLVFKGAEERKQFAEK 452

Query: 620 MREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPE 679
           M+ D E + + F++      + SK RVL  + +L      DA  L    +L   PD   +
Sbjct: 453 MKRDAEQLYDFFQKLGDAAYLLSKFRVLEKLLDLLKLEDPDALILEVETLLSSYPDISED 512

Query: 680 VVERLVALREAIPRKDAKEIVQECKEIYENSLINGNPPKPGFVFPRV 726
            VE ++  R  + +   K ++   +EI ++   +  PP+   +F RV
Sbjct: 513 HVEAVLKARGDLDKSMVKALLSRLREIVKSYERDVEPPRT--IFSRV 557

Sec6 is a component of the multiprotein exocyst complex. Sec6 interacts with Sec8, Sec10 and Exo70.These exocyst proteins localise to regions of active exocytosis-at the growing ends of interphase cells and in the medial region of cells undergoing cytokinesis-in an F-actin-dependent and exocytosis- independent manner. Length = 557
>gnl|CDD|227500 COG5173, SEC6, Exocyst complex subunit SEC6 [Intracellular trafficking and secretion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 743
PF06046566 Sec6: Exocyst complex component Sec6; InterPro: IP 100.0
KOG2286667 consensus Exocyst complex subunit SEC6 [Intracellu 100.0
COG5173742 SEC6 Exocyst complex subunit SEC6 [Intracellular t 100.0
KOG2180793 consensus Late Golgi protein sorting complex, subu 100.0
PF04100383 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007 99.96
KOG0412773 consensus Golgi transport complex COD1 protein [In 99.74
PF10191766 COG7: Golgi complex component 7 (COG7); InterPro: 99.02
PF07393710 Sec10: Exocyst complex component Sec10; InterPro: 98.73
KOG2176800 consensus Exocyst complex, subunit SEC15 [Intracel 98.32
PF04437494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 97.88
PF05664677 DUF810: Protein of unknown function (DUF810); Inte 97.72
PF06419618 COG6: Conserved oligomeric complex COG6; InterPro: 97.45
PF10475291 DUF2450: Protein of unknown function N-terminal do 96.6
PF04048142 Sec8_exocyst: Sec8 exocyst complex component speci 95.93
PF06248593 Zw10: Centromere/kinetochore Zw10; InterPro: IPR00 95.73
PF10474234 DUF2451: Protein of unknown function C-terminus (D 95.3
PF04091311 Sec15: Exocyst complex subunit Sec15-like ; InterP 94.69
PF08318331 COG4: COG4 transport protein; InterPro: IPR013167 93.93
PF01843105 DIL: DIL domain; InterPro: IPR018444 Dilute encode 93.73
smart00762324 Cog4 COG4 transport protein. This region is found 92.03
PF15469182 Sec5: Exocyst complex component Sec5 91.93
KOG2286 667 consensus Exocyst complex subunit SEC6 [Intracellu 91.49
PF10392132 COG5: Golgi transport complex subunit 5; InterPro: 91.04
KOG1011 1283 consensus Neurotransmitter release regulator, UNC- 88.84
KOG3691 982 consensus Exocyst complex subunit Sec8 [Intracellu 86.3
PF0870087 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te 84.98
KOG3958371 consensus Putative dynamitin [Cytoskeleton] 84.35
PF10112199 Halogen_Hydrol: 5-bromo-4-chloroindolyl phosphate 82.91
PF09763701 Sec3_C: Exocyst complex component Sec3; InterPro: 81.18
PF07889126 DUF1664: Protein of unknown function (DUF1664); In 80.09
>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex Back     alignment and domain information 
Probab=100.00  E-value=6.8e-90  Score=796.53  Aligned_cols=526  Identities=29%  Similarity=0.477  Sum_probs=267.0

Q ss_pred             hhcHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHhhhHhhHHHHHHHHHhhcccccccccCccchhhhhhhhh
Q 004593          176 FEDVDQTWETFEKTLWTHISNFYKLSKESPQTLVRALRVVEMQEILDQQLAEEAAEAEGDGVMATIANPRRSAKKSTTAM  255 (743)
Q Consensus       176 f~~v~~l~~~f~~~i~~~~~~~l~l~~~~p~~lv~a~rIIe~EE~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (743)
                      |++|+.+++.|+++||.++++++++++.+|++||+|+||||+||++|+++...                    ++..++.
T Consensus         1 F~~v~~l~~~~~~~l~~i~~~~l~~~~~~~~~lv~~~~Iie~EE~~D~~~~~~--------------------~~~~~~~   60 (566)
T PF06046_consen    1 FEDVDELSDEFEKQLWSIVRNSLELVRSDPELLVRAVRIIEREERADERAAAR--------------------QEAQSFQ   60 (566)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhHHHHHH--------------------hhhhccc
Confidence            89999999999999999999999999999999999999999999999998742                    1122224


Q ss_pred             hhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHhhhhHHHHHhcccccCCccchHHH
Q 004593          256 ASSKNLTQQKLKVQGKHYKDKCYEKIRKTVEGRFNKLLTELVF-EDLKAALEETRTIGGELGDIYDYVAPCFPPRYEIFQ  334 (743)
Q Consensus       256 ~~~~~~~~~~~~~~pk~~k~~~~~~l~~sv~~r~~~~~~~~~~-~d~~~~L~~~~~i~~dL~~v~~~~~~cfPp~~~I~~  334 (743)
                      +++|.++...++++||+||++|+++|+.+|++||+.+...+.+ ..+...|+.++|+++||..|++.++|||||+|+||+
T Consensus        61 ~~~f~~~~~~~~~rpr~~r~~~~~~l~~sv~~~~~~~~~~~~~~~~l~~~l~~l~~~~~DL~~v~~~~~~cfPp~~~I~~  140 (566)
T PF06046_consen   61 AARFRSINQGPPGRPRNWRQKFFEALRESVEERFEQAEEREENKSWLARHLEALRWVLEDLQVVKDDVVPCFPPEYDIFN  140 (566)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHHHhCcccCCCCChHHH
Confidence            5667777778899999999999999999999999966554433 234456888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHchhHHhHHhHhcCCCC-cccccccCCCCchhHHHHHHHHHHHHHHHH
Q 004593          335 LMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVD-ESLAQVCSESGAMDPLMNAYVERMQATTKK  413 (743)
Q Consensus       335 ~y~~~YH~~l~~~L~~l~~~~~~l~~~~ll~ll~Wv~~Y~~~m~~l~i~-~~~l~~ll~~~~~~~L~~~Y~~~~~~~l~e  413 (743)
                      +|+.+||++++++|+++.  .+++++++++.||+|+..|++.|+..++. .+.++|+|+++..+.|+++|++.++.+|++
T Consensus       141 ~y~~~YH~~l~~~l~~l~--~~~l~~~~ll~ll~W~~~Y~~~m~~~~l~~~~~l~plL~~~~~~~L~~~Yl~~~~~~~~e  218 (566)
T PF06046_consen  141 TYVSMYHNALSDHLQELI--SPDLEANDLLSLLSWVNTYPSIMGHPDLAIKEQLGPLLPDEKLEELEDDYLSRIQKKMKE  218 (566)
T ss_dssp             -----------------------------------------------------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHc--cCCCCHHHHhhheechhhChHhhcCCcccchhhccCCCChhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997  67999999999999977799988866555 677899999999999999999999999999


Q ss_pred             HHHHHHhhcc-----cCCCCCCCCCcccccchhHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 004593          414 WYLNILDADK-----VQPPKRTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAEP  488 (743)
Q Consensus       414 w~~~~l~~e~-----~~~Pe~d~dg~~~t~~~vdlfqmi~q~l~~a~~~~~~~~~~~v~~~~~~~l~~f~~~y~~~l~~~  488 (743)
                      |+.|+++.|.     +.+|+.|.+|+|+|++|+||||||+||+++|.....+.++..++..+...+..|+..+.+.++++
T Consensus       219 W~~n~l~~E~~~w~~~~~Pe~~~dg~y~t~~~~difqmi~qql~va~~~l~~~v~~~v~~~~~~~l~~~~~~~~~~~~~~  298 (566)
T PF06046_consen  219 WMDNILEQEVKDWSEEKEPEEDEDGYYHTPLPVDIFQMINQQLDVASESLQGKVLQRVLEELANFLKSYQDAWQEFKEEH  298 (566)
T ss_dssp             HHHHHHHHHHHHHHC-S--EE-TTS-EE-HHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCCcCCCCCeecCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999996     67999999999999999999999999999997666554443444444444444444444443322


Q ss_pred             C-----------CCCCcchhhheecccHhhHHHHHHHHHHhhccCCcchHHH-----------------HHHHHHHHHHh
Q 004593          489 A-----------SEIGLEPLCAIINNNLRCYDLAMELSTSTIESLPPNYAEQ-----------------EALFHLISVIF  540 (743)
Q Consensus       489 ~-----------~~~~~~~liA~~N~~~~~~e~~~~l~~~~~~~v~~~~~~~-----------------~~~~~l~~~if  540 (743)
                      .           .+++.+|+||++|||.+|+++++++...+.+.+++.|...                 .|+..|++.||
T Consensus       299 ~~~~~~~~~~~~~~~~~eyliA~~N~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~if  378 (566)
T PF06046_consen  299 FKDRSSVKPKENPPGYLEYLIAVANNCLRCRDYVESLEQKFEEKVSQKYMERISSDLEELMDGFDDLAKECCQYLLEEIF  378 (566)
T ss_dssp             HHHHHHHHHCC--S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhcccccccccchHHHHHHHhccHHHHHHHHHHHHHhcccccchHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1           2667899999999999999999999999988887555431                 79999999999


Q ss_pred             CChhhHHHHhhccccccCCchhhhhHHhhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcC-----chH
Q 004593          541 DDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFVEACLEETIVLFIDHLLSQKNYI-----KEI  615 (743)
Q Consensus       541 ~d~~l~p~~~~lft~~W~~~~~v~~I~~Tl~dy~~d~~~~L~~~~~~~l~~~l~~~~v~~Yi~~l~k~~~~~-----~~~  615 (743)
                      .|  ++|+|+++||++||++++|++||.|++||++||+.||+|++|+.|+.++++++|.+|+++|+++|..+     .+.
T Consensus       379 ~D--l~p~~~~Lft~~W~~~~~~~~I~~Ti~dY~~d~~~~l~~~~~~~l~~~~~~~~v~~Yl~~l~~kk~~~~~~~~~~~  456 (566)
T PF06046_consen  379 ND--LKPHFKKLFTKKWYSGEAVDTICATIEDYLQDFQHYLRPPYFQELIEELHDRVVKEYLRALMKKKIKFKNKEERKE  456 (566)
T ss_dssp             HC--THHHHCTTTSGGGCTS-HHHHHHHHHHHHHHHHCCCS-HHHHHHHHHHHHHHHHHHHHHGGGG---------CCCC
T ss_pred             HH--hHHHHHHhCcCcCcCcchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhcccHHHHHH
Confidence            98  99999999999999998899999999999999996699999999999999999999999999987533     478


Q ss_pred             HHHHHHHHHHHHHHHHhcccchhhhhhhhhhHHHHHHhhccCChhhHHHHHHHHhhhCCCCCHHHHHHHHHHhcCCChHh
Q 004593          616 TIERMREDEEAIIEAFREYVSVNKVESKVRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKD  695 (743)
Q Consensus       616 ~a~~i~~D~~~l~~~F~~~~s~~~v~~~~~~l~~l~~ll~~~d~~~i~~~~~~l~~~yPD~s~~~v~aiL~~R~Dl~r~~  695 (743)
                      +|++|++|++.+++||.++++.+.+.+.+.+|+.|+++++++|++++.+++.+|++.|||++.+||++||.+|||++|++
T Consensus       457 ~a~~i~~D~~~l~~~F~~~~~~~~~~~~~~~l~~l~~ll~~~d~~~i~l~~~~l~~~ypD~~~~~v~alL~~R~D~~r~~  536 (566)
T PF06046_consen  457 AAERIRRDAEQLKSFFSKLGSKSEVKSSFDVLEDLLELLRLEDPEMIKLEVSSLLQKYPDISEEHVEALLALRGDLSRSE  536 (566)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH-HS-CCCHHHHHHHHHCC-TT--SHHHHHHHCT-TT--HHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH
Confidence            99999999999999999999877788999999999999988999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCCcccccc
Q 004593          696 AKEIVQECKEIYENSLINGNPPKPGFVFPRV  726 (743)
Q Consensus       696 ~~~il~~~~~~~~~~~~~~~~~~~~~iFs~i  726 (743)
                      ++++++.+++...+...+++||.| ||||+|
T Consensus       537 ~~~il~~~~~~~~~~~~~~~~~~~-~ifs~i  566 (566)
T PF06046_consen  537 VKEILEILREIIKSYPANAEPPPP-TIFSRI  566 (566)
T ss_dssp             HHHHHHHHHHHHHHHHCCCH------GGGG-
T ss_pred             HHHHHHHHHHHhhccccccCCCCC-CCCCCC
Confidence            999999999998888654444555 599986

Sec6 interacts with Sec8, Sec10 and Exo70.These exocyst proteins localise to regions of active exocytosis-at the growing ends of interphase cells and in the medial region of cells undergoing cytokinesis-in an F-actin-dependent and exocytosis- independent manner [].; PDB: 2FJI_2.
>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5173 SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] Back     alignment and domain information
>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis [] Back     alignment and domain information
>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins [] Back     alignment and domain information
>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information
>PF05664 DUF810: Protein of unknown function (DUF810); InterPro: IPR008528 This family consists of several plant proteins of unknown function Back     alignment and domain information
>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation Back     alignment and domain information
>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known Back     alignment and domain information
>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells Back     alignment and domain information
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known Back     alignment and domain information
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF08318 COG4: COG4 transport protein; InterPro: IPR013167 This region is found in yeast oligomeric golgi complex component 4 which is involved in ER to Golgi and intra Golgi transport [] Back     alignment and domain information
>PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains Back     alignment and domain information
>smart00762 Cog4 COG4 transport protein Back     alignment and domain information
>PF15469 Sec5: Exocyst complex component Sec5 Back     alignment and domain information
>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking Back     alignment and domain information
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi Back     alignment and domain information
>KOG3958 consensus Putative dynamitin [Cytoskeleton] Back     alignment and domain information
>PF10112 Halogen_Hydrol: 5-bromo-4-chloroindolyl phosphate hydrolysis protein; InterPro: IPR018770 This entry consists of prokaryotic proteins that mediate the hydrolysis of 5-bromo-4-chloroindolyl phosphate bonds Back     alignment and domain information
>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8 Back     alignment and domain information
>PF07889 DUF1664: Protein of unknown function (DUF1664); InterPro: IPR012458 The members of this family are hypothetical plant proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query743
2fji_1399 Crystal Structure Of The C-Terminal Domain Of The E 5e-08
>pdb|2FJI|1 Chain 1, Crystal Structure Of The C-Terminal Domain Of The Exocyst Subunit Sec6p Length = 399 Back     alignment and structure 
Iteration: 1

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/367 (20%), Positives = 150/367 (40%), Gaps = 64/367 (17%)
Query: 397 DPLMNAYVERMQATTKKWYLNILDAD------KVQPPKRTEDGKLYTPAAVDLFRILGEQ 450
           + L   Y+  +     +W  N+  A+      +  PP    DG L+       F++  +Q
Sbjct: 10  ETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQ 69
Query: 451 VQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAE--------------------PAS 490
           V++    +   +L  +      ++   Q     +++E                    P  
Sbjct: 70  VEVAAGTNQAKILVGVVERFSDLLTKRQKNWISKISEEIKKQINYNHKYDIDPESITPED 129
Query: 491 EI--GL-EPLCAIINNNLRCYDLAMELS---------------TSTIESLPPNYAE--QE 530
           E   GL E L A+ N+ ++  D A+ +S               T+ +E     +AE  Q 
Sbjct: 130 ECPGGLVEYLIAVSNDQMKAADYAVAISSKYGKLVSKVYEKQITNHLEGTLDGFAEVAQC 189
Query: 531 ALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFV 590
           +   LI+++FDD  +++ + +++SK W  G   + I  T  +Y  D+K  +    F  F+
Sbjct: 190 SSLGLITLMFDD--LRKPYQEIFSKTWYMGSQAQQIADTLDEYLLDIKPQMNSVLFVNFI 247
Query: 591 EACLEETIVLFI-----DHLLSQKNYIKEITIERMREDEEAIIEAFREYVSVNKVESKVR 645
           +  + ETI+ F+     +H    KN      +E M+ D E   + F + +  N  ESK  
Sbjct: 248 DNVIGETIIKFLTALSFEHSFKNKN---NKFLEAMKRDFEIFYQLFVKVLDGN--ESKDT 302
Query: 646 VLTDMRELA------SANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKEI 699
           ++T    +       S   +D+   I+   LE   D   +++  ++  R+ +   + K+I
Sbjct: 303 LITQNFTVMEFFMDLSCEPIDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKKI 362
Query: 700 VQECKEI 706
           VQ+  E+
Sbjct: 363 VQQATEM 369

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query743
2fji_1399 Exocyst complex component SEC6; exocytosis, tandem 2e-54
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
3swh_A341 MUNC13-1, protein UNC-13 homolog A; alpha helical, 4e-04
>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 399 Back     alignment and structure
 Score =  191 bits (487), Expect = 2e-54
 Identities = 70/394 (17%), Positives = 151/394 (38%), Gaps = 61/394 (15%)

Query: 397 DPLMNAYVERMQATTKKWYLNILDADK------VQPPKRTEDGKLYTPAAVDLFRILGEQ 450
           + L   Y+  +     +W  N+  A+         PP    DG L+       F++  +Q
Sbjct: 10  ETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQ 69

Query: 451 VQIVRDNSTDVMLYRISLAIIQVMIDFQAAERQRLAE----------------------- 487
           V++    +   +L  +      ++   Q     +++E                       
Sbjct: 70  VEVAAGTNQAKILVGVVERFSDLLTKRQKNWISKISEEIKKQINYNHKYDIDPESITPED 129

Query: 488 PASEIGLEPLCAIINNNLRCYDLAMELSTSTIESLPPNYAEQ-----------------E 530
                 +E L A+ N+ ++  D A+ +S+   + +   Y +Q                  
Sbjct: 130 ECPGGLVEYLIAVSNDQMKAADYAVAISSKYGKLVSKVYEKQITNHLEGTLDGFAEVAQC 189

Query: 531 ALFHLISVIFDDPEVQQLFLKLYSKEWSDGQVTEYILPTFSDYFADVKMFVEERSFRRFV 590
           +   LI+++FDD  +++ + +++SK W  G   + I  T  +Y  D+K  +    F  F+
Sbjct: 190 SSLGLITLMFDD--LRKPYQEIFSKTWYMGSQAQQIADTLDEYLLDIKPQMNSVLFVNFI 247

Query: 591 EACLEETIVLFIDHLLSQKNYIKEI--TIERMREDEEAIIEAFREYVSVNK-----VESK 643
           +  + ETI+ F+  L  + ++  +    +E M+ D E   + F + +  N+     +   
Sbjct: 248 DNVIGETIIKFLTALSFEHSFKNKNNKFLEAMKRDFEIFYQLFVKVLDGNESKDTLITQN 307

Query: 644 VRVLTDMRELASANSVDAFALIYTNVLEHQPDCPPEVVERLVALREAIPRKDAKEIVQEC 703
             V+    +L+    +D+   I+   LE   D   +++  ++  R+ +   + K+IVQ+ 
Sbjct: 308 FTVMEFFMDLSCE-PIDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKKIVQQA 366

Query: 704 KEIYE----NSLINGNPPKPGFVFPRVKCLSASK 733
            E+      N   NG   +P     R       +
Sbjct: 367 TEMLHEYRRNMEANGVDREPTL-MRRFVLEFEKQ 399
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus} Length = 341 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00