Citrus Sinensis ID: 004782

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-
MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMETLLTLE
cccccccccccHHHHHHHHHHHcHHcccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcccccccccccccccccccccccccccccccccccccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccHHcccccccccccccHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
ccccccccccHHHHHHHHHHHHcHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHccccccHEEEEcccccccccccccccccccccccEEcccccHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHHccccccccccccccccEEEEEcccccccccccccHHHHcccccccccccccccccccHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHcccccccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
mdifdglpispekAYLREELARIEVswvaprfdslphVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMhemddevpTTVAVAYTtnnsqplsrrtrlkgdnqfgvhgladgshsstfdghdedgsleahdetsldglsigwlanstpdEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAqtgttglhfmkgqlrsyqlpkqkrqngislsgtllavspvsalmapMGKAQAAAKELLDSILDSVVRIFENHVVVGELLesrssrhdintpksmiadanwnpdseasvtggySIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLaskapskekrdgsedgltfafrftdatisipnqgADLIrqgwsrrgtnvlqegygtaavlpEQGIYLAASIYRPVLQFTDKVASMlpqkysqlgNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAisspaafrprahtaatyvpsiekgrpVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMETLLTLE
mdifdglpispEKAYLREELARIEVSwvaprfdslPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKrrlgtrnkqlhqlwYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYttnnsqplsrrtrLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVgellesrssrhdintpksmiadanwnpdSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARlaskapskekrdgsedGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAIsspaafrprAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMETLLTLE
MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNdiieevvdevvHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMETLLTLE
************KAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAY****************************************************GLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINS****IG****TGTTGLHFMKGQL*************ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELL***************************SVTGGYSIGFSMTVLQSECQQLICEILRAT*******************************LTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMETLL***
*******************LARIEVSWVAPRFDSLPHVV******************NDIIEEVVDEVVHAYHTGFNKAIQNYSQIL**********************************WYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSS*********************************************************************************************SDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQ**********************************************LLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRS****************W******SVTGGYSIGFSMTVLQSECQQLICEILR***************************************************************************VLPEQGIYLAASIYRPVLQFTDKVAS************GLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHT********EKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMETLLTL*
MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATP****************************DGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMETLLTLE
**IFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHE*********************S*****KGDN**********************************************DEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSR********TGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSE*SVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLAS************DGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMETLLTLE
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MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLxxxxxxxxxxxxxxxxxxxxxxxxxxxxLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMETLLTLE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query731 2.2.26 [Sep-21-2011]
Q93YU5 1053 Probable exocyst complex yes no 0.993 0.689 0.751 0.0
O35382 975 Exocyst complex component yes no 0.224 0.168 0.321 2e-17
Q62824 975 Exocyst complex component yes no 0.224 0.168 0.321 2e-17
Q96A65 974 Exocyst complex component yes no 0.290 0.217 0.297 2e-17
Q9HE88 1111 Probable exocyst complex N/A no 0.235 0.154 0.290 2e-15
Q54P76 1182 Exocyst complex component yes no 0.281 0.174 0.253 3e-14
Q9VNH6 985 Exocyst complex component yes no 0.221 0.164 0.280 2e-10
P32855 1065 Exocyst complex component yes no 0.266 0.183 0.228 2e-06
Q9XWS2 893 Exocyst complex component yes no 0.191 0.156 0.212 0.0004
>sp|Q93YU5|EXOC4_ARATH Probable exocyst complex component 4 OS=Arabidopsis thaliana GN=SEC8 PE=1 SV=1 Back     alignment and function desciption
 Score = 1096 bits (2835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/749 (75%), Positives = 637/749 (85%), Gaps = 23/749 (3%)

Query: 1   MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDI 60
           M IF+GLP+  +K YLREELARI+ SW A RFDSLPHVVHILTSKDRE ++ ILK+Q+D+
Sbjct: 1   MGIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDV 60

Query: 61  IEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQ 120
           +EEVVDEVVHAYH GFNKAIQNYSQILRLFSES E I +LK DLAEAK+ LG RNKQLHQ
Sbjct: 61  VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGARNKQLHQ 120

Query: 121 LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVG 180
           LWYRSVTLRHIISLLDQIEGIAKVP+RIEKLIA KQ+YAA+Q++ QS+LMLEREGLQTVG
Sbjct: 121 LWYRSVTLRHIISLLDQIEGIAKVPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVG 180

Query: 181 ALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNN 240
           ALQDVRSELTKLRG LF+K+L+DLHAHLYNRGEYSS   S++E DDEVPTT AVA +  +
Sbjct: 181 ALQDVRSELTKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMS 240

Query: 241 SQPLSRRTR-LKGDNQFGVHGLADGSH-------SSTFDGHDEDGSLEAHDETSLDGLSI 292
           SQPLSRRTR LKGD+QFGV GL +GS+       SS+FDGHDE+ S+E HDE++ D    
Sbjct: 241 SQPLSRRTRTLKGDSQFGVRGLTNGSYRTASNDESSSFDGHDEEDSVE-HDESTADTARN 299

Query: 293 G------------WLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIIC 340
           G            WL++STPDEF+EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIIC
Sbjct: 300 GTDSKLLSHQLPPWLSDSTPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIIC 359

Query: 341 QRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNG 400
           Q+LRPTIHEII SKIKAH +  N S+SA  Q  ++   GLH +KGQ  +Y+L K+K QNG
Sbjct: 360 QKLRPTIHEIIISKIKAHLETTNLSKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNG 419

Query: 401 ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHD 460
           IS SGT LAVSPVS LMAP GKAQAAAKELLDSILD++V+IFENHVV+GELLE ++S+HD
Sbjct: 420 ISNSGTHLAVSPVSPLMAPGGKAQAAAKELLDSILDTIVKIFENHVVIGELLEMKASQHD 479

Query: 461 INTPKSMIADANWNPDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAV 519
           INTP+S+  D NWN +SEAS  TGGY+I F +TVLQSECQQLICEILRATPEAASADAA 
Sbjct: 480 INTPRSLPTDVNWNTESEASQATGGYTISFPLTVLQSECQQLICEILRATPEAASADAAA 539

Query: 520 QTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYG 579
           QTA+LA KAP K+KRD  EDGLTF FRFTDAT+SI NQGADLIRQGW +R  N   EGYG
Sbjct: 540 QTAKLAKKAPKKDKRDAPEDGLTFTFRFTDATVSISNQGADLIRQGWGKRAPNASLEGYG 599

Query: 580 TAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMF 639
           +AAVLPEQGIYLAASIYRPVLQFTDK+ SMLP+K+SQL NDGLL F ENFVKDHLLPTMF
Sbjct: 600 SAAVLPEQGIYLAASIYRPVLQFTDKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTMF 659

Query: 640 VDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPK 699
           VDYRKGVQQAISS AAFRPRAHT  TY  ++EKGRP+LQGLLAID LAKEVLGWAQAMPK
Sbjct: 660 VDYRKGVQQAISSAAAFRPRAHT-TTYTATVEKGRPILQGLLAIDLLAKEVLGWAQAMPK 718

Query: 700 FAADLVKYVQTFLERTYERCRTSYMETLL 728
           FA DLVKYVQTFLERT+ERCRTSYME +L
Sbjct: 719 FATDLVKYVQTFLERTFERCRTSYMEAVL 747
Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|O35382|EXOC4_MOUSE Exocyst complex component 4 OS=Mus musculus GN=Exoc4 PE=1 SV=2 Back     alignment and function description
>sp|Q62824|EXOC4_RAT Exocyst complex component 4 OS=Rattus norvegicus GN=Exoc4 PE=1 SV=1 Back     alignment and function description
>sp|Q96A65|EXOC4_HUMAN Exocyst complex component 4 OS=Homo sapiens GN=EXOC4 PE=1 SV=1 Back     alignment and function description
>sp|Q9HE88|SEC8_NEUCR Probable exocyst complex component sec8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sec-8 PE=3 SV=1 Back     alignment and function description
>sp|Q54P76|EXOC4_DICDI Exocyst complex component 4 OS=Dictyostelium discoideum GN=exoc4 PE=3 SV=1 Back     alignment and function description
>sp|Q9VNH6|EXOC4_DROME Exocyst complex component 4 OS=Drosophila melanogaster GN=sec8 PE=1 SV=3 Back     alignment and function description
>sp|P32855|SEC8_YEAST Exocyst complex component SEC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC8 PE=1 SV=1 Back     alignment and function description
>sp|Q9XWS2|EXOC4_CAEEL Exocyst complex component 4 OS=Caenorhabditis elegans GN=sec-8 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query731
225448968 1076 PREDICTED: probable exocyst complex comp 0.995 0.676 0.807 0.0
296085980 1084 unnamed protein product [Vitis vinifera] 0.991 0.668 0.809 0.0
356533947 1066 PREDICTED: probable exocyst complex comp 0.987 0.677 0.795 0.0
356574621 1065 PREDICTED: probable exocyst complex comp 0.986 0.676 0.787 0.0
224113089 1084 predicted protein [Populus trichocarpa] 0.972 0.655 0.765 0.0
449490429 1073 PREDICTED: probable exocyst complex comp 0.991 0.675 0.748 0.0
449444630 1073 PREDICTED: probable exocyst complex comp 0.991 0.675 0.748 0.0
297833818 1053 hypothetical protein ARALYDRAFT_897214 [ 0.993 0.689 0.748 0.0
18398855 1053 exocyst complex component 4 [Arabidopsis 0.993 0.689 0.751 0.0
224097788 1087 predicted protein [Populus trichocarpa] 0.979 0.658 0.733 0.0
>gi|225448968|ref|XP_002269663.1| PREDICTED: probable exocyst complex component 4-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1267 bits (3279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/758 (80%), Positives = 671/758 (88%), Gaps = 30/758 (3%)

Query: 1   MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDI 60
           M  FDGLPISPEK+YLRE+L+RI+ SW A RFDSLPHVVHILTSKDREGE Q LK+Q+DI
Sbjct: 1   MGTFDGLPISPEKSYLREDLSRIDESWAAARFDSLPHVVHILTSKDREGEAQFLKEQSDI 60

Query: 61  IEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQ 120
           IEEVVDEVVHAYH+GFNKAIQNYSQILRLFSESA SI  LKVDLA+AK+ LG RNKQLHQ
Sbjct: 61  IEEVVDEVVHAYHSGFNKAIQNYSQILRLFSESAASISVLKVDLADAKKLLGARNKQLHQ 120

Query: 121 LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVG 180
           LWYRSVTLRHII+LLDQ+EGIAKVPARIEKLIA KQ+YAAVQLHAQS LMLEREGLQTVG
Sbjct: 121 LWYRSVTLRHIIALLDQVEGIAKVPARIEKLIAEKQFYAAVQLHAQSTLMLEREGLQTVG 180

Query: 181 ALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNN 240
           ALQDVRSELTKLRG++FYK+LEDLHAHLYN+GEYSSA  S+HE DDEVPTT AVA++ N+
Sbjct: 181 ALQDVRSELTKLRGIIFYKILEDLHAHLYNKGEYSSAASSIHERDDEVPTTTAVAFSMNS 240

Query: 241 SQPLSRRTRL-KGDNQFGVHGLADGSH------SSTFDGHDEDGSLEAHDETSLDGLSI- 292
           SQPLSRRTRL KGDNQFGV GL DG         S+FDGHDE+G+LE HDE +LDG +  
Sbjct: 241 SQPLSRRTRLLKGDNQFGVLGLGDGYRPGSIDGGSSFDGHDEEGALELHDEATLDGYNAI 300

Query: 293 ---------------------GWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGK 331
                                 WL+ +TPDEF+E+++KSDAPLHVKYLQTMVECLC+LGK
Sbjct: 301 TKVNGGDGSQKDIKIVSHQIPPWLSYATPDEFLESMKKSDAPLHVKYLQTMVECLCMLGK 360

Query: 332 VAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQ 391
           VAAAGA+ICQRLRPTIHEIITSKIKAHA+L+NS+RS I +AA T TTGLH++KGQL SYQ
Sbjct: 361 VAAAGAMICQRLRPTIHEIITSKIKAHAELVNSTRSGICRAAHTATTGLHYLKGQLESYQ 420

Query: 392 LPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGEL 451
            PKQKRQNGISL+GTLLAVSPVS +MAP G AQ AAKELLDSILD VVRIFENHVVVGEL
Sbjct: 421 SPKQKRQNGISLAGTLLAVSPVSPVMAPAGTAQTAAKELLDSILDIVVRIFENHVVVGEL 480

Query: 452 LESRSSRHDINTPKSMIADANWNPDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATP 510
           LES+ ++ D+NTPKS+  + NWN DSEAS VTGGYSIGFS+TVLQSECQQLICEILRATP
Sbjct: 481 LESKGTQVDMNTPKSVTVEVNWNHDSEASQVTGGYSIGFSLTVLQSECQQLICEILRATP 540

Query: 511 EAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRG 570
           EAASADA VQTARLASKAPSKEKRD SEDGLTFAFRFTDATIS+PNQG DLIRQGW+RRG
Sbjct: 541 EAASADATVQTARLASKAPSKEKRDRSEDGLTFAFRFTDATISVPNQGVDLIRQGWTRRG 600

Query: 571 TNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFV 630
            NVLQEGYG+AA+LPEQGIYLAASIYRPV+QFTDK+ASMLP+KYSQLGNDGLLAFVENFV
Sbjct: 601 PNVLQEGYGSAAILPEQGIYLAASIYRPVIQFTDKIASMLPKKYSQLGNDGLLAFVENFV 660

Query: 631 KDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEV 690
           KDH LPTMFVDYRKGVQQAISSPAAFRPR+H A+TY P +EKGRPVLQGLLAIDFLAKEV
Sbjct: 661 KDHFLPTMFVDYRKGVQQAISSPAAFRPRSHAASTYSPLVEKGRPVLQGLLAIDFLAKEV 720

Query: 691 LGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMETLL 728
           LGWAQAMPKFA DLVKYVQTFLERTYERCRTSYME +L
Sbjct: 721 LGWAQAMPKFAGDLVKYVQTFLERTYERCRTSYMEAVL 758

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296085980|emb|CBI31421.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356533947|ref|XP_003535519.1| PREDICTED: probable exocyst complex component 4-like [Glycine max] Back     alignment and taxonomy information
>gi|356574621|ref|XP_003555444.1| PREDICTED: probable exocyst complex component 4-like [Glycine max] Back     alignment and taxonomy information
>gi|224113089|ref|XP_002316388.1| predicted protein [Populus trichocarpa] gi|222865428|gb|EEF02559.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449490429|ref|XP_004158603.1| PREDICTED: probable exocyst complex component 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449444630|ref|XP_004140077.1| PREDICTED: probable exocyst complex component 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297833818|ref|XP_002884791.1| hypothetical protein ARALYDRAFT_897214 [Arabidopsis lyrata subsp. lyrata] gi|297330631|gb|EFH61050.1| hypothetical protein ARALYDRAFT_897214 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18398855|ref|NP_566372.1| exocyst complex component 4 [Arabidopsis thaliana] gi|24418673|sp|Q93YU5.1|EXOC4_ARATH RecName: Full=Probable exocyst complex component 4; AltName: Full=Exocyst complex component Sec8; Short=AtSEC8 gi|16604637|gb|AAL24111.1| unknown protein [Arabidopsis thaliana] gi|26452109|dbj|BAC43144.1| unknown protein [Arabidopsis thaliana] gi|332641377|gb|AEE74898.1| exocyst complex component 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224097788|ref|XP_002311074.1| predicted protein [Populus trichocarpa] gi|222850894|gb|EEE88441.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query731
TAIR|locus:2076249 1053 SEC8 "subunit of exocyst compl 0.642 0.446 0.734 4e-296
UNIPROTKB|Q96A65 974 EXOC4 "Exocyst complex compone 0.290 0.217 0.288 3.6e-18
RGD|621791 975 Exoc4 "exocyst complex compone 0.224 0.168 0.309 6.4e-18
UNIPROTKB|Q62824 975 Exoc4 "Exocyst complex compone 0.224 0.168 0.309 6.4e-18
UNIPROTKB|F1PMM8 975 EXOC4 "Uncharacterized protein 0.352 0.264 0.264 2.1e-17
MGI|MGI:1096376 975 Exoc4 "exocyst complex compone 0.224 0.168 0.309 6.8e-17
UNIPROTKB|A6QLD1 975 EXOC4 "EXOC4 protein" [Bos tau 0.351 0.263 0.271 8.5e-17
ZFIN|ZDB-GENE-041210-112 968 exoc4 "exocyst complex compone 0.224 0.169 0.309 3.3e-16
UNIPROTKB|E1BUN2 976 EXOC4 "Uncharacterized protein 0.351 0.263 0.269 7.6e-16
UNIPROTKB|D4A9S7404 Exoc4 "Exocyst complex compone 0.224 0.405 0.309 8.4e-15
TAIR|locus:2076249 SEC8 "subunit of exocyst complex 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1802 (639.4 bits), Expect = 4.0e-296, Sum P(2) = 4.0e-296
 Identities = 356/485 (73%), Positives = 403/485 (83%)

Query:   257 GVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIG------------WLANSTPDEFV 304
             G +  A    SS+FDGHDE+ S+E HDE++ D    G            WL++STPDEF+
Sbjct:   265 GSYRTASNDESSSFDGHDEEDSVE-HDESTADTARNGTDSKLLSHQLPPWLSDSTPDEFI 323

Query:   305 EAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINS 364
             EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIICQ+LRPTIHEII SKIKAH +  N 
Sbjct:   324 EAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIICQKLRPTIHEIIISKIKAHLETTNL 383

Query:   365 SRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQ 424
             S+SA  Q  ++   GLH +KGQ  +Y+L K+K QNGIS SGT LAVSPVS LMAP GKAQ
Sbjct:   384 SKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNGISNSGTHLAVSPVSPLMAPGGKAQ 443

Query:   425 AAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEAS-VTG 483
             AAAKELLDSILD++V+IFENHVV+GELLE ++S+HDINTP+S+  D NWN +SEAS  TG
Sbjct:   444 AAAKELLDSILDTIVKIFENHVVIGELLEMKASQHDINTPRSLPTDVNWNTESEASQATG 503

Query:   484 GYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTF 543
             GY+I F +TVLQSECQQLICEILRATPEAASADAA QTA+LA KAP K+KRD  EDGLTF
Sbjct:   504 GYTISFPLTVLQSECQQLICEILRATPEAASADAAAQTAKLAKKAPKKDKRDAPEDGLTF 563

Query:   544 AFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFT 603
              FRFTDAT+SI NQGADLIRQGW +R  N   EGYG+AAVLPEQGIYLAASIYRPVLQFT
Sbjct:   564 TFRFTDATVSISNQGADLIRQGWGKRAPNASLEGYGSAAVLPEQGIYLAASIYRPVLQFT 623

Query:   604 DKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTA 663
             DK+ SMLP+K+SQL NDGLL F ENFVKDHLLPTMFVDYRKGVQQAISS AAFRPRAHT 
Sbjct:   624 DKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTMFVDYRKGVQQAISSAAAFRPRAHTT 683

Query:   664 ATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSY 723
              TY  ++EKGRP+LQGLLAID LAKEVLGWAQAMPKFA DLVKYVQTFLERT+ERCRTSY
Sbjct:   684 -TYTATVEKGRPILQGLLAIDLLAKEVLGWAQAMPKFATDLVKYVQTFLERTFERCRTSY 742

Query:   724 METLL 728
             ME +L
Sbjct:   743 MEAVL 747
GO:0000145 "exocyst" evidence=IEA;IDA
GO:0005634 "nucleus" evidence=ISM
GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA
GO:0015031 "protein transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0009846 "pollen germination" evidence=IGI
GO:0009860 "pollen tube growth" evidence=IGI
GO:0005829 "cytosol" evidence=IDA
GO:0048354 "mucilage biosynthetic process involved in seed coat development" evidence=IMP
GO:0009506 "plasmodesma" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
UNIPROTKB|Q96A65 EXOC4 "Exocyst complex component 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|621791 Exoc4 "exocyst complex component 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q62824 Exoc4 "Exocyst complex component 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PMM8 EXOC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1096376 Exoc4 "exocyst complex component 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A6QLD1 EXOC4 "EXOC4 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041210-112 exoc4 "exocyst complex component 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BUN2 EXOC4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|D4A9S7 Exoc4 "Exocyst complex component 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93YU5EXOC4_ARATHNo assigned EC number0.75160.99310.6894yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00018142001
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (776 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query731
pfam04048142 pfam04048, Sec8_exocyst, Sec8 exocyst complex comp 2e-43
>gnl|CDD|202865 pfam04048, Sec8_exocyst, Sec8 exocyst complex component specific domain Back     alignment and domain information 
 Score =  152 bits (387), Expect = 2e-43
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 5/142 (3%)

Query: 15  YLREELARIEVSWVAPRFDSLPHVVHILTSKDREG-----EVQILKDQNDIIEEVVDEVV 69
            L+E L  I+  W     D    V   L   D             +     IE+ + EVV
Sbjct: 1   KLKEVLNTIKYEWPQVLSDDANPVELALQLLDDTSVGLAHRYPEFEQLKKRIEQALQEVV 60

Query: 70  HAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLR 129
           + +H GFN +I +Y +IL   + S E I++LK  L EAK+ LGTR  +L +L  RS   +
Sbjct: 61  NEHHQGFNSSIGSYHKILSSITSSQERIRQLKESLEEAKKLLGTRKPELKELNQRSQKYK 120

Query: 130 HIISLLDQIEGIAKVPARIEKL 151
            +I LLD IE + KVP ++E+L
Sbjct: 121 EMIELLDAIEELRKVPDKLEQL 142

Length = 142

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 731
KOG3691 982 consensus Exocyst complex subunit Sec8 [Intracellu 100.0
PF04048142 Sec8_exocyst: Sec8 exocyst complex component speci 100.0
PF10475291 DUF2450: Protein of unknown function N-terminal do 99.51
KOG2115951 consensus Vacuolar sorting protein VPS45 [Intracel 99.18
PF06248593 Zw10: Centromere/kinetochore Zw10; InterPro: IPR00 97.99
PF15469182 Sec5: Exocyst complex component Sec5 97.92
PF04100383 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007 97.74
PF04124338 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 97.71
KOG2176800 consensus Exocyst complex, subunit SEC15 [Intracel 97.3
PF10392132 COG5: Golgi transport complex subunit 5; InterPro: 96.84
PF06148133 COG2: COG (conserved oligomeric Golgi) complex com 96.77
KOG2069581 consensus Golgi transport complex subunit [Intrace 96.39
KOG2180793 consensus Late Golgi protein sorting complex, subu 96.27
KOG2346636 consensus Uncharacterized conserved protein [Funct 95.96
PF0870087 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te 94.07
KOG2307705 consensus Low density lipoprotein receptor [Intrac 92.3
PF10191766 COG7: Golgi complex component 7 (COG7); InterPro: 91.05
KOG0412773 consensus Golgi transport complex COD1 protein [In 86.82
PF04437 494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 83.81
PF09763701 Sec3_C: Exocyst complex component Sec3; InterPro: 83.7
>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=2.8e-76  Score=664.78  Aligned_cols=591  Identities=19%  Similarity=0.221  Sum_probs=451.3

Q ss_pred             CCCCchHHHHHHHHHhHhhcCCCCCCchHHHHHhhcc--CchhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhHhhHH
Q 004782            8 PISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTS--KDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQ   85 (731)
Q Consensus         8 p~~~~~~~l~~~l~~I~~ew~~~~f~~~~~~l~~L~s--~~~e~~~~~l~~~~~~l~~~L~~vV~~h~q~Fn~sI~sy~~   85 (731)
                      |+.-++....+...+|...|.           .+.+.  ++||.++++||+.++..+.+|+++|++|+|+|+++|.+|++
T Consensus        18 ~~n~~~d~sn~~G~lInvi~n-----------L~~Se~~e~re~ek~~Led~Yk~~~a~Lq~lv~~H~q~~t~~i~sy~~   86 (982)
T KOG3691|consen   18 YVNYGTDMSNELGLLINVIRN-----------LVGSEDTEPRETEKERLEDSYKEFGAALQELVHTHKQDFTTGISSYGE   86 (982)
T ss_pred             cccccCCcccccchhhhHHHh-----------hccCCcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344455556667778887777           44432  38999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHhHHHHHHHHHHHHHHHHhcHHHHHHHHhccCHHHHHHHHH
Q 004782           86 ILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHA  165 (731)
Q Consensus        86 i~~~i~~Sq~~i~~lK~~L~~~k~~L~~~~~~L~~L~~~s~~~~~~l~iL~~Ie~l~~vP~kie~lis~k~yl~A~~lL~  165 (731)
                      |++.|+.||++|.+||++|.+||++|+|+|++|++||.++.+||+||++|++||++++||++||.+|++|+|++|.++|.
T Consensus        87 i~s~It~~rerI~~vK~~L~~~k~ll~~~rdeLqklw~~~~q~K~Vi~vL~eieEl~qvPqkie~~i~keqY~~Asdll~  166 (982)
T KOG3691|consen   87 ISSGITNCRERIHNVKNNLEACKELLNTRRDELQKLWAENSQYKKVIEVLKEIEELRQVPQKIETLIAKEQYLQASDLLT  166 (982)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcccCCCCCCccHHHHHHHHHhHHHHHHHHHHHHHHhHhcCCCcchhhhcccccCCCCccccccccccCCCCCcc
Q 004782          166 QSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLS  245 (731)
Q Consensus       166 ~s~~~l~~~~L~~I~AL~dlR~~L~~q~~~L~d~LieEL~~~lY~Ks~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (731)
                      +++.+++++ |.+|.+|+|||++|+.+++.|+++|+||||+++|+|+..... .+..+ .+.++.               
T Consensus       167 ~~~~~lng~-L~~VEgLs~l~~ele~~~~~L~~~L~eELv~ily~ks~~~~l-~~~~~-~~~~~s---------------  228 (982)
T KOG3691|consen  167 RAWELLNGP-LDGVEGLSDLRSELEGLLSHLEDILIEELVSILYLKSVAYPL-VSYCR-TNPLSS---------------  228 (982)
T ss_pred             HHHHHhcCc-chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhH-Hhhhc-CCchhh---------------
Confidence            999999996 999999999999999999999999999999999999753111 11111 111111               


Q ss_pred             ccccccCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccccccccc-----cC----CCch--HHHHHhhcC-CCc
Q 004782          246 RRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWL-----AN----STPD--EFVEAIRKS-DAP  313 (731)
Q Consensus       246 ~~t~~~~~n~~~~~~l~~~s~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l-----~~----~~~~--~~~e~~~~~-~~~  313 (731)
                       +  +.                      +.+++.++.++..+++.+.+.+     .+    .+.+  ...+++.-. |++
T Consensus       229 -~--l~----------------------~~~~~~in~t~l~~sr~~~ea~~~k~~~g~~sv~~~~~~~~~~~l~~~~pe~  283 (982)
T KOG3691|consen  229 -R--LN----------------------DFLYNNINTTTLGTSRQLLEALCHKSDAGSGSVRDIRIVLEKEDLLLSLPEA  283 (982)
T ss_pred             -H--HH----------------------HHhhcccCccccCccHHHHHHHHHHhhcCCcchhhHHHHHhhccccccchhh
Confidence             0  00                      0011111111111111110000     00    0000  001111122 555


Q ss_pred             hhHHHHHHHHHHHHhhCChHHHHHHHHhhhhHHHHHHHHHhHHHHHHhhhccccccccccccCccccccccccccccccc
Q 004782          314 LHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLP  393 (731)
Q Consensus       314 ~s~~yi~~lve~L~~LgkL~~Al~~i~qRl~~EL~~iV~~ti~e~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~  393 (731)
                      .+-.|+.++++.++++.|+|.++++|..|+.+|+++||.+++..++..                       |.    +..
T Consensus       284 ~sslf~~il~k~~~~~~k~p~~~n~i~~~~~~el~niv~kSt~~i~~~-----------------------g~----~~~  336 (982)
T KOG3691|consen  284 NSSLFRRILEKFTTVDSKSPAIVNKISERINVELVNIVSKSTYDISLS-----------------------GE----TDR  336 (982)
T ss_pred             HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhhccchhhhcc-----------------------cc----chh
Confidence            677788999999999999999999999999999999998754444221                       10    000


Q ss_pred             ccccccCccccccccccCccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccccCCCC
Q 004782          394 KQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANW  473 (731)
Q Consensus       394 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~l~eLl~~lF~k~~~V~~~H~vv~e~~~~~~~~~~~~~~~~~~~~~~~  473 (731)
                      +    +..                  .+....+|.++||.||.||.++++.|.++++....    .+.=.|.+..     
T Consensus       337 e----~at------------------~~tn~f~L~ell~~if~kf~a~aq~Ha~~~~~s~~----~~vv~P~~sq-----  385 (982)
T KOG3691|consen  337 E----HAT------------------FDTNHFMLLELLEEIFTKFEAAAQKHASSLHKSLQ----NDVVSPKVSQ-----  385 (982)
T ss_pred             h----hhh------------------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccccCCcccC-----
Confidence            1    100                  01112379999999999999999999999884331    1221222111     


Q ss_pred             CCCCCccccCCCChHHhHHHHHHHHHHHHHHHhhcCCcchhh-hHHHH----------HHHhhccCCCCCCCCCCCCCcc
Q 004782          474 NPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASA-DAAVQ----------TARLASKAPSKEKRDGSEDGLT  542 (731)
Q Consensus       474 ~~~s~~s~~~~y~~~~vW~~iQ~El~~LL~dYL~~~~~~~~~-~~~~~----------~~~~as~~p~k~k~~~~~~~~~  542 (731)
                              ...|++.++|..+|+||+.||.+||+..+..... +++.+          .+.++...     ..+++ ..+
T Consensus       386 --------~d~f~~~~~W~k~qs~ielllsE~i~~nn~~~~~~e~s~~~sp~s~~r~~~~~f~~e~-----~~~~~-s~~  451 (982)
T KOG3691|consen  386 --------KDTFDFTDFWQKAQSEIELLLSEYIDNNNNSVKGTEMSINNSPASNERKKLFDFTNEI-----AVEPN-SNL  451 (982)
T ss_pred             --------CCcccHHHHHHHHHHHHHHHHHHHhccCCCccccccccccCCCCCcchhHHHHhhccc-----cCCCC-ccc
Confidence                    1269999999999999999999999887764443 22211          11111111     12222 368


Q ss_pred             eeeecCCCccccCcccccccccccccCCCCccccCccccccccCCCccchhhhhHHHHHHHHHHHhhCCCCCcccccchH
Q 004782          543 FAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGL  622 (731)
Q Consensus       543 F~F~~s~~~~s~~~~~~~~~~~~~~~s~~~~~~e~~~~~~vl~~p~ifn~~~I~~p~l~Fi~~i~~ilp~~~~~~~~~~l  622 (731)
                      |.|+++.++..+..+...++...+..++--...+.+.-.+.+|+||+|||++||+|++.|++.++.+++++.  ..+|.+
T Consensus       452 f~~~~~~~a~~k~~~l~~qrs~~~~~~~el~~g~s~e~~e~ic~Psvfni~vI~~pll~fie~te~~l~~~p--~q~c~l  529 (982)
T KOG3691|consen  452 FYHRINELANEKAPELILQRSNASVSTIELFSGSSKEIVELICKPSVFNIKVILPPLLRFIEETESILKNPP--IQPCSL  529 (982)
T ss_pred             chhHHHHHhhhccchhhhhhhhhhhccchhccCcchhhhcccCCcccceeeehhhHHHHHHHHHHHHcCCCC--CCCchH
Confidence            999999888877766433333332211111111222334669999999999999999999999999998875  568999


Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHHhcCCCccccccCCccccccccccCccccchHHHHHHHHHHHHHHHHhchHHHH
Q 004782          623 LAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAA  702 (731)
Q Consensus       623 ~~Fl~~Fv~~~FLp~l~~~~~~~~~~~~~~~dAfk~~~~~~~~~~~~l~~~rPil~~~~~v~~~i~el~~~l~t~P~y~~  702 (731)
                      ++|+++||+++||||+...+...|+.++++.||||...+|+.  .+.++..+|++|.++.+..-+-++...+++++.|.+
T Consensus       530 ~~Fm~~yi~~sFl~qv~~~m~~~ie~~~k~~~a~~l~~s~~~--i~i~k~~~~l~q~~~~ve~~L~~v~n~~~~l~~~~~  607 (982)
T KOG3691|consen  530 RNFMDEYIKGSFLPQVYKEMSSHIEGIMKDVDAFRLHRSWKI--IPIFKCHLPLLQSFHIVEDYLPIVANLAVDLYELSD  607 (982)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhHhhcccCcceeeecCHhh--hhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999988  778889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhh
Q 004782          703 DLVKYVQTFLERTYERCRTSYMETLL  728 (731)
Q Consensus       703 e~~~lv~t~L~~y~e~C~~~y~~~v~  728 (731)
                      .|+.++|..+..|++.|+++|++.|+
T Consensus       608 ~~l~m~~~~~~~Y~~~c~~a~~g~~~  633 (982)
T KOG3691|consen  608 YLLNMVCNHLSDYLDICRAALRGIVQ  633 (982)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            99999999999999999999999987

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known Back     alignment and domain information
>KOG2115 consensus Vacuolar sorting protein VPS45 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells Back     alignment and domain information
>PF15469 Sec5: Exocyst complex component Sec5 Back     alignment and domain information
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] Back     alignment and domain information
>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 [] Back     alignment and domain information
>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking Back     alignment and domain information
>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex Back     alignment and domain information
>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2346 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi Back     alignment and domain information
>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis [] Back     alignment and domain information
>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information
>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query731
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 62.9 bits (152), Expect = 3e-10
 Identities = 102/703 (14%), Positives = 212/703 (30%), Gaps = 183/703 (26%)

Query: 70  HAYHTGFNKAIQNYS--QILRLFSESAESIKELKV-DLAEAKRRLGTRNKQLHQLWYRSV 126
           H +H  F      Y    IL +F ++   +      D+ +  + + ++ +  H +  +  
Sbjct: 3   HHHHMDFETGEHQYQYKDILSVFEDAF--VDNFDCKDVQDMPKSILSKEEIDHIIMSKDA 60

Query: 127 ---TLRHIISLLDQIEGIAKVPARIEKLIAGKQY---YAAVQLHAQSALMLEREGLQTVG 180
              TLR   +LL + E + +    +E+++    Y    + ++   +   M+ R  ++   
Sbjct: 61  VSGTLRLFWTLLSKQEEMVQ--KFVEEVLR-INYKFLMSPIKTEQRQPSMMTRMYIEQRD 117

Query: 181 ALQDVRSELTKLRGVLFYKVLEDLHAHLYN--RGEYSSAVLSMHEMDDEVPTTVAVAYTT 238
            L +      K   V   +    L   L      +     + +  +     T VA+    
Sbjct: 118 RLYNDNQVFAK-YNVSRLQPYLKLRQALLELRPAKN----VLIDGVLGSGKTWVALD--- 169

Query: 239 NNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANS 298
                +    +++    F +  L            +   ++    +  L  +   W + S
Sbjct: 170 -----VCLSYKVQCKMDFKIFWL-------NLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 299 TPDEFVEAIRKSDAPLHVKYL---QTMVECLCIL-----GKVAAAGAIICQRLRPTIHEI 350
                ++ +R       ++ L   +    CL +L      K   A  + C+ L      +
Sbjct: 218 DHSSNIK-LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL------L 270

Query: 351 ITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSY------QLPKQKRQNGISLS 404
            T   +    L  ++ + I     + T     +K  L  Y       LP++       L+
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE------VLT 324

Query: 405 GTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRH----- 459
                +S ++  +       A          D +  I E+ +    +LE    R      
Sbjct: 325 TNPRRLSIIAESIRDG---LATWDNWKHVNCDKLTTIIESSL---NVLEPAEYRKMFDRL 378

Query: 460 -----DINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAAS 514
                  + P  +++   W    +                 S+   ++ ++ + +     
Sbjct: 379 SVFPPSAHIPTILLS-LIWFDVIK-----------------SDVMVVVNKLHKYS----- 415

Query: 515 ADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVL 574
                    L  K P +                   TISIP+   +L  +          
Sbjct: 416 ---------LVEKQPKES------------------TISIPSIYLELKVK---------- 438

Query: 575 QEGYGTAAVLPEQGIYLAASI---YRPVLQFTDKVASMLPQK----YSQLGNDGLLAFVE 627
                      E    L  SI   Y     F D    + P      YS +G+   L  +E
Sbjct: 439 ----------LENEYALHRSIVDHYNIPKTF-DSDDLIPPYLDQYFYSHIGHH--LKNIE 485

Query: 628 NFVKDHLLPTMFVDYR------KGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLL 681
           +  +  L   +F+D+R      +    A ++  +          Y P I    P  + L+
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545

Query: 682 A--IDFLAKEVLGWAQAMPKFAADLVKY-----VQTFLERTYE 717
              +DFL           PK   +L+       ++  L    E
Sbjct: 546 NAILDFL-----------PKIEENLICSKYTDLLRIALMAEDE 577
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query731
2d2s_A235 Exocyst complex component EXO84; tethering complex 94.77
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2 Back     alignment and structure
Probab=94.77  E-value=0.067  Score=54.55  Aligned_cols=69  Identities=13%  Similarity=0.117  Sum_probs=58.4

Q ss_pred             HHHHHHHhcHHHHHHHHhccCHHHHHHHHHHHHHHHcccCC----CCCCccHHHHHHHHHhHHHHHHHHHHHH
Q 004782          136 DQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGL----QTVGALQDVRSELTKLRGVLFYKVLEDL  204 (731)
Q Consensus       136 ~~Ie~l~~vP~kie~lis~k~yl~A~~lL~~s~~~l~~~~L----~~I~AL~dlR~~L~~q~~~L~d~LieEL  204 (731)
                      +.+.++...|+.|+-+|++++|.+|++++.++-..+.+-.-    .+..++..++..+.+++..|.+.|++||
T Consensus        13 ~~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l   85 (235)
T 2d2s_A           13 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSI   85 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56778889999999999999999999999999999965221    1245577799999999999999999988

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query731
d2d2sa1229 Exocyst complex component EXO84 {Baker's yeast (Sa 91.98
>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.98  E-value=0.18  Score=48.50  Aligned_cols=69  Identities=13%  Similarity=0.111  Sum_probs=50.9

Q ss_pred             HHHHHHHhcHHHHHHHHhccCHHHHHHHHHHHHHHHccc----CCCCCCccHHHHHHHHHhHHHHHHHHHHHH
Q 004782          136 DQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLERE----GLQTVGALQDVRSELTKLRGVLFYKVLEDL  204 (731)
Q Consensus       136 ~~Ie~l~~vP~kie~lis~k~yl~A~~lL~~s~~~l~~~----~L~~I~AL~dlR~~L~~q~~~L~d~LieEL  204 (731)
                      ..|++|...||.++.+|++++|.+|++++..+-+.+.+-    ....+..+..++..+.+.+..|.+.|..+|
T Consensus         7 ~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l   79 (229)
T d2d2sa1           7 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSI   79 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhHhcccHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            468899999999999999999999999998877776542    122233445577777777777766666555