Citrus Sinensis ID: 004989
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 720 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LJR3 | 845 | Protein SPA1-RELATED 3 OS | yes | no | 0.840 | 0.715 | 0.570 | 0.0 | |
| Q94BM7 | 794 | Protein SPA1-RELATED 4 OS | no | no | 0.773 | 0.701 | 0.539 | 1e-175 | |
| Q9SYX2 | 1029 | Protein SUPPRESSOR OF PHY | no | no | 0.698 | 0.488 | 0.341 | 5e-76 | |
| Q9T014 | 1036 | Protein SPA1-RELATED 2 OS | no | no | 0.425 | 0.295 | 0.342 | 3e-42 | |
| P93471 | 672 | E3 ubiquitin-protein liga | N/A | no | 0.384 | 0.412 | 0.323 | 2e-32 | |
| P43254 | 675 | E3 ubiquitin-protein liga | no | no | 0.4 | 0.426 | 0.296 | 4e-28 | |
| Q8NHY2 | 731 | E3 ubiquitin-protein liga | yes | no | 0.344 | 0.339 | 0.280 | 4e-21 | |
| Q9R1A8 | 733 | E3 ubiquitin-protein liga | yes | no | 0.344 | 0.338 | 0.274 | 5e-20 | |
| Q9Z1Z1 | 1108 | Eukaryotic translation in | no | no | 0.220 | 0.143 | 0.257 | 3e-13 | |
| Q9NZJ5 | 1116 | Eukaryotic translation in | no | no | 0.220 | 0.142 | 0.253 | 2e-11 |
| >sp|Q9LJR3|SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/680 (57%), Positives = 483/680 (71%), Gaps = 75/680 (11%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
MEGSS+S +SR N SGVSDRN L ER R S+ + + V G
Sbjct: 1 MEGSSNS------NSRGFNTSGVSDRNTEFLPVERLTTRSKPSSHVD-----EYVRSLFG 49
Query: 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134
++ G ++ IDPFV ++EWGDVSLRQWLDKP+RSVDV+ECLH+FRQIVEIV
Sbjct: 50 STSTHKSGE----DDSLGIDPFVRSLEWGDVSLRQWLDKPERSVDVFECLHVFRQIVEIV 105
Query: 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194
AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS E+G +Q K++ S
Sbjct: 106 NAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSLEDGPISQ----KEIGSS- 160
Query: 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254
RRE+ +S+A ++ Y +K+L+ ++
Sbjct: 161 -----------RREEA---------VSKAIAIEEKGVY------------NKLLERKIEK 188
Query: 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 314
+ EEK QPFPMK IL MET+WY SPEE G+ +CASD+YRLGVLLFELFCP + EEK
Sbjct: 189 LE-EEKTQPFPMKHILAMETSWYTSPEEDFGSSSTCASDVYRLGVLLFELFCPVPSREEK 247
Query: 315 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+RTMSSLRHRVLPPQ+LLK PKEASFCLWLLHPEP+ RP M +LLQSEF+ EPRD++EER
Sbjct: 248 SRTMSSLRHRVLPPQILLKCPKEASFCLWLLHPEPTCRPSMSDLLQSEFITEPRDNLEER 307
Query: 375 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 434
EAAIELR++I+E+E LLEFLLL+QQRKQESA +LQD VS + SDIE+V K+Q IL+K+G
Sbjct: 308 EAAIELRDRIEEQESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILKKRG- 366
Query: 435 LGSFAELANDD---LSGLNIPSLNIIDNDCSATMGSRKRFRPE-LQLHHLEECDDNLDDN 490
S ++ + DD SG + S + + SA + SRKR R L L + E D+
Sbjct: 367 -SSLSDFSKDDHQYTSGQPLMSFQ-ANEEPSAFLASRKRVRQGILALENGVEVDEE---- 420
Query: 491 QKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVK--PSGRPLVRHSQLSSDGRTS 548
++ +L +SSRLM+NFKKLES YFLTR R +K SG+ L RHS LSS+
Sbjct: 421 -------SQGSTLLESSRLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRG 473
Query: 549 KPLVNERSSINNLGSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNS 606
+V+E+SS++N + + + ++ R+ GWI+PFLEGLC+YLSFS+LRVKADL QGDLLNS
Sbjct: 474 SMIVSEKSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNS 533
Query: 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 666
SNLVC+L+FDR+GELFA AGVNKKIK+FEC++I+N+NRDIHYPVVE+A RSKLSS+CWNS
Sbjct: 534 SNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNS 593
Query: 667 YIKSQIASSNFEGVVQVGQV 686
YIKSQIASSNF+GVVQ+ V
Sbjct: 594 YIKSQIASSNFDGVVQIWDV 613
|
Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 615 bits (1587), Expect = e-175, Method: Compositional matrix adjust.
Identities = 366/678 (53%), Positives = 441/678 (65%), Gaps = 121/678 (17%)
Query: 15 MEGSSDSAWQDSDSSRALN-ISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTH 73
M+GSS+S SSR LN SGVS+ F G S H D V
Sbjct: 1 MKGSSES------SSRGLNNTSGVSE----------FCTDGSKS-----LSHIDYVRSLL 39
Query: 74 GDHLR-NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVE 132
G H N GGL D V A+E DVSLRQWLD P RSVD +EC H+FRQIVE
Sbjct: 40 GSHKEANLGGLDD--------DSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVE 91
Query: 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 192
IV AAHSQGIVVHNVRPSCFVMSSFN+VSFIESASCSDSGS +E T++ E
Sbjct: 92 IVNAAHSQGIVVHNVRPSCFVMSSFNNVSFIESASCSDSGS---DEDATTKSRE------ 142
Query: 193 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252
+ ++ +IL R
Sbjct: 143 ----------------------------------------------IGSSRQEEILSERR 156
Query: 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGE 312
+ +Q E KKQPFPMKQIL ME +WY S EE G+ +CASDIYRLGVLLFELFCP S+ E
Sbjct: 157 SKQQEEVKKQPFPMKQILAMEMSWYTSHEEDNGSLCNCASDIYRLGVLLFELFCPVSSRE 216
Query: 313 EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372
EK+RTMSSLRHRVLPPQ+LL +PKEASFCLWLLHPEPS RP M ELLQSEF+NEPR+++E
Sbjct: 217 EKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLE 276
Query: 373 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
EREAA+ELR++I+E+ELLLEFL L+QQRKQE+A KLQD +S + SDI++V K+Q +L++K
Sbjct: 277 EREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQK 336
Query: 433 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQK 492
G D + + SRKR R + EE +D+ +++
Sbjct: 337 G-------------------------RDVRSFLASRKRIRQGAETTAAEEENDDNSIDEE 371
Query: 493 HNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG---RPLVR-HSQLSSDGRTS 548
L E +L +SSRLM+N KKLES YF TR R +K + +PL R +S LS +GR+S
Sbjct: 372 SKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSS 431
Query: 549 KPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSN 608
E+SS++ SK+ ++ R+ GWI+PFLEGLCKYLSFSKLRVKADL QGDLLNSSN
Sbjct: 432 -----EKSSMSQ-PSKDPINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSN 485
Query: 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668
LVC++ FDRDGE FA AGVNKKIK+FEC++II + RDIHYPVVE+ASRSKLS ICWNSYI
Sbjct: 486 LVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYI 545
Query: 669 KSQIASSNFEGVVQVGQV 686
KSQ+ASSNFEGVVQV V
Sbjct: 546 KSQVASSNFEGVVQVWDV 563
|
Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SYX2|SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 286 bits (731), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 203/594 (34%), Positives = 313/594 (52%), Gaps = 91/594 (15%)
Query: 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 164
+SLR++L + L +FRQ+VE+V +AHS+ + + ++RPS F + + +I
Sbjct: 275 ISLREFLRSSYAKREKRHGLCLFRQLVELVDSAHSKRLFLLDLRPSLFTLVPSKKLRYIG 334
Query: 165 SASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224
+ +D SD E+ LN + ++ SS R ++ R+ DL L +P N L S
Sbjct: 335 NFGKNDLESDVDED-LNRRRPVVEESSSG------GRDSKKRKMDLHL-NSPGNQLQATS 386
Query: 225 C----MQSSSAYGTHVVLVEG-----MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 275
+ S ++V +Q+ + N ++V V K+ +E
Sbjct: 387 TGRPFKRKSPVIDLNMVDARNPDSCELQQQDYIKN-LSVSSVSRKQS-----MSTWLEEQ 440
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFP 335
WY PEE+ G + S+IY LGVLLFEL C +GE M+ LRHR+LPP L K+P
Sbjct: 441 WYTCPEEINGEDIGEKSNIYALGVLLFELLCHCESGEMHAAMMADLRHRILPPTFLSKYP 500
Query: 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLL 395
KEA FCLWLLHPEPS RP ++L+SE + E DS++ AA E+ ELLL FL
Sbjct: 501 KEAGFCLWLLHPEPSSRPSARDILKSELICE-DDSVKSTAAAEEI------SELLLHFLS 553
Query: 396 LVQ-QRKQESAKKLQDIVSFICSDIEEV----SKQQAILRKKGGLGSFAELANDDLSGLN 450
++ Q+K++++K LQDI + + DI+E S +++R G + + +
Sbjct: 554 SLEVQKKKKASKLLQDIQT-LEDDIKEAERRYSSNVSLVRSHGAIEKRVQSS-------- 604
Query: 451 IPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLM 510
+D C+ S F P T N + RLM
Sbjct: 605 -----PLDEHCTT---SSALFVP----------------------TANTD-------RLM 627
Query: 511 KNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN-ERSSINNLGSKEGYSE 569
N ++LE AYF R + + S ++ R+ K L + +R S N +++ ++
Sbjct: 628 SNIRQLEDAYFFMRSQ---------INLSSSAATARSDKTLKDRDRCSENQNENQDMSTK 678
Query: 570 GRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK 629
G+ S + F EGLCK+ +SK + GDLLNS+++VCSLSFD D E AAAG++K
Sbjct: 679 GKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISK 738
Query: 630 KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683
KIK+F+ +A +NE+ +HYP+VEM ++SKLS +CWNSYIK+ +AS++++GVVQ+
Sbjct: 739 KIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQI 792
|
Controls normal photoperiodic flowering and regulates circadian rhythms. Required for suppression of photomorphogenesis in dark-grown seedlings and for normal elongation growth of adult plants. Integral component of the COP1/SPA E3 ubiquitin-protein ligase complex. Involved in HY5, HFR1, LAF1 and CO degradation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: - EC: . EC: - |
| >sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 175/333 (52%), Gaps = 27/333 (8%)
Query: 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 164
+SLR+WL ++ V+ EC++IFRQIV+ V +HSQG+V+ ++RPS F + N V ++
Sbjct: 301 LSLREWLKSERQEVNKAECMYIFRQIVDHVDCSHSQGVVLCDLRPSSFKIFKENAVKYV- 359
Query: 165 SASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224
S S +S + +N + + L +PL R R D ++ P +
Sbjct: 360 ---VSGSQRESFDSNMNKETL--SQLENPL--------VRRRLGDTSSLSIPAKKQKSSG 406
Query: 225 -------CMQSSSAYGTHVVLVEG-MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276
Q + +G +QE ++ + V PF L E W
Sbjct: 407 PSSRQWPMFQRAGGVNIQTENNDGAIQEFHFRSSQPHCSTV---ACPFTSVSEQL-EEKW 462
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPK 336
YASPEEL G S +S+IY LG+LL+EL F + MS +RHR+LPP+ L + PK
Sbjct: 463 YASPEELRGDMRSASSNIYSLGILLYELLSQFQCERAREAAMSDIRHRILPPKFLSENPK 522
Query: 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLL 396
EA FCLWLLHPE S RP ++LQSE +N D E ++ + ++ E ELL FL L
Sbjct: 523 EAGFCLWLLHPESSCRPSTRDILQSEVVNGIPDLYAE-GLSLSIEQEDTESELLQHFLFL 581
Query: 397 VQQRKQESAKKLQDIVSFICSDIEEVSKQQAIL 429
Q+++Q+ A L + ++ + +DIEE+ K++ +
Sbjct: 582 SQEKRQKHAGNLMEEIASVEADIEEIVKRRCAI 614
|
Involved in suppression of photomorphogenesis in dark-grown seedlings. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 167/331 (50%), Gaps = 54/331 (16%)
Query: 371 MEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQA--- 427
ME+ EA + ++LL+FL ++++K + K++Q + FI DI V K +
Sbjct: 150 MEQEEAERNM-------QILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLY 202
Query: 428 -----------ILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQ 476
+L GG S + + SGL LN+ S + + + ++
Sbjct: 203 RARDRYSVKLRMLDDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSGSHTKKNDGKSQIS 262
Query: 477 LH-HLEECDDNL--DDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPV-KPSG 532
H H + D + D+Q N +G +L + R+ F L+ Y R + KP G
Sbjct: 263 SHGHGIQRRDPITGSDSQYINQSG---LALVRKKRVHTQFNDLQECYLQKRRQAADKPHG 319
Query: 533 RPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKL 592
+ ER + N S+EGYS G ++ F L + +S+L
Sbjct: 320 Q-------------------QERDT--NFISREGYSCG-----LDDFQSVLTTFTRYSRL 353
Query: 593 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 652
RV A++ GD+ +S+N+V S+ FDRD +LFA AGV+++IKVF+ A++NE D H PVVE
Sbjct: 354 RVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVE 413
Query: 653 MASRSKLSSICWNSYIKSQIASSNFEGVVQV 683
M +RSKLS + WN Y K+QIASS++EG+V V
Sbjct: 414 MTTRSKLSCLSWNKYAKNQIASSDYEGIVTV 444
|
E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Pisum sativum (taxid: 3888) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 170/331 (51%), Gaps = 43/331 (12%)
Query: 371 MEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQA-IL 429
+ ER+ +E E ++LL+FL ++++K + ++Q + +I DI V + + +
Sbjct: 148 LAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLY 207
Query: 430 RKKGGLGSFAELANDDLS------------GLNIPSLNIIDNDCSATMGSRK-RFRPELQ 476
R + + DD S G N SL+I + ++K + +
Sbjct: 208 RARDRYSVKLRMLGDDPSTRNAWPHEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGS 267
Query: 477 LHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYF-LTRCRPVKPSGRPL 535
H L +K L+G++ +SL +S+ M K++ + + L C L
Sbjct: 268 SHGLP---------KKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECY--------L 310
Query: 536 VRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK 595
+ QL+ + + N++S + +EGYS G + F L + +S+LRV
Sbjct: 311 QKRRQLADQPNSKQE--NDKSVVR----REGYSNG-----LADFQSVLTTFTRYSRLRVI 359
Query: 596 ADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655
A++ GD+ +S+N+V S+ FDRD ELFA AGV++ IKVF+ +++NE D+ P+VEM++
Sbjct: 360 AEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMST 419
Query: 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686
RSKLS + WN + K+ IASS++EG+V V V
Sbjct: 420 RSKLSCLSWNKHEKNHIASSDYEGIVTVWDV 450
|
E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors such as HY5, HYH and LAF1. Down-regulates MYB21, probably via ubiquitination process. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q8NHY2|RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 140/310 (45%), Gaps = 62/310 (20%)
Query: 373 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
+++ +E + ++L+EFL + ++ K+E +++Q +S + DI+ V +
Sbjct: 247 QKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS------ 300
Query: 433 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQK 492
G ++ ++ D +P S+ + S + +P
Sbjct: 301 ---GLYSPVSEDS----TVPQFEAPSPSHSSIIDSTEYSQPPGF-----SGSSQTKKQPW 348
Query: 493 HNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLV 552
+N T R RL +F+ LE YF TR S++S D RT+ L
Sbjct: 349 YNSTLASRRK-----RLTAHFEDLEQCYFSTR-------------MSRISDDSRTASQL- 389
Query: 553 NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DLLNSSNLVC 611
+ F E L K+ ++ +R A L+ DL N S++V
Sbjct: 390 ------------------------DEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVS 425
Query: 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 671
S+ FDRD + FA AGV KKIKV+E D +I + DIHYP EM SK+S I W+SY K+
Sbjct: 426 SIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNL 485
Query: 672 IASSNFEGVV 681
+ASS++EG V
Sbjct: 486 LASSDYEGTV 495
|
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1. Homo sapiens (taxid: 9606) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9R1A8|RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 62/310 (20%)
Query: 373 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
+++ +E + ++L+EFL + ++ K+E +++Q +S + DI+ V +
Sbjct: 249 QKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS------ 302
Query: 433 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQK 492
G ++ ++ D +P S+ + S + +P +K
Sbjct: 303 ---GLYSPVSEDS----TVPQFEAPSPSHSSIIDSTEYSQPP--------GFSGTSQTKK 347
Query: 493 HNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLV 552
+ S + RL +F+ LE YF TR S++S D RT+ L
Sbjct: 348 QPWYNSTLAS--RRKRLTAHFEDLEQCYFSTR-------------MSRISDDSRTASQL- 391
Query: 553 NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DLLNSSNLVC 611
+ F E L K+ ++ +R A L+ DL N S++V
Sbjct: 392 ------------------------DEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVS 427
Query: 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 671
S+ FDRD + FA AGV KKIKV+E +I + DIHYP EM SK+S I W+SY K+
Sbjct: 428 SIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNL 487
Query: 672 IASSNFEGVV 681
+ASS++EG V
Sbjct: 488 LASSDYEGTV 497
|
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1. Mus musculus (taxid: 10090) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9Z1Z1|E2AK3_RAT Eukaryotic translation initiation factor 2-alpha kinase 3 OS=Rattus norvegicus GN=Eif2ak3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 89/241 (36%), Gaps = 82/241 (34%)
Query: 123 CLHIFRQIVEIVYAAHSQGIVVHNVRPS--CFVMSSFNHVSFIESASCSDSGSDSHEEGL 180
CLHIF QI E V HS+G++ +++PS F M V
Sbjct: 906 CLHIFLQIAEAVQFLHSKGLMHRDLKPSNIFFTMDDVVKVG------------------- 946
Query: 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240
D LVTA D E + + AY TH V
Sbjct: 947 ----------------------------DFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 978
Query: 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300
T Y SPE++ G S DI+ LG++
Sbjct: 979 ---------------------------------TKLYMSPEQIHGNNYSHKVDIFSLGLI 1005
Query: 301 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
LFEL PFST E+ RT++ +R+ PP K+P+E +L P P RP+ ++++
Sbjct: 1006 LFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPQEHMMVQDMLSPSPMERPEATDIIE 1065
Query: 361 S 361
+
Sbjct: 1066 N 1066
|
Phosphorylates the alpha subunit of eukaryotic translation-initiation factor 2 (EIF2), leading to its inactivation and thus to a rapid reduction of translational initiation and repression of global protein synthesis. Serves as a critical effector of unfolded protein response (UPR)-induced G1 growth arrest due to the loss of cyclin-D1 (CCND1). Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9NZJ5|E2AK3_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 3 OS=Homo sapiens GN=EIF2AK3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 86/241 (35%), Gaps = 82/241 (34%)
Query: 123 CLHIFRQIVEIVYAAHSQGIVVHNVRPS--CFVMSSFNHVSFIESASCSDSGSDSHEEGL 180
CLHIF QI E V HS+G++ +++PS F M V
Sbjct: 914 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG------------------- 954
Query: 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240
D LVTA D E + + AY H V
Sbjct: 955 ----------------------------DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVG 986
Query: 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300
T Y SPE++ G S DI+ LG++
Sbjct: 987 ---------------------------------TKLYMSPEQIHGNSYSHKVDIFSLGLI 1013
Query: 301 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
LFEL PFST E+ RT++ +R+ PP K+P E +L P P RP+ +++
Sbjct: 1014 LFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 1073
Query: 361 S 361
+
Sbjct: 1074 N 1074
|
Phosphorylates the alpha subunit of eukaryotic translation-initiation factor 2 (EIF2), leading to its inactivation and thus to a rapid reduction of translational initiation and repression of global protein synthesis. Serves as a critical effector of unfolded protein response (UPR)-induced G1 growth arrest due to the loss of cyclin-D1 (CCND1). Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 720 | ||||||
| 255585740 | 889 | ubiquitin ligase protein cop1, putative | 0.912 | 0.739 | 0.689 | 0.0 | |
| 359493656 | 903 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.923 | 0.736 | 0.669 | 0.0 | |
| 356542282 | 892 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.913 | 0.737 | 0.661 | 0.0 | |
| 356546870 | 892 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.908 | 0.733 | 0.661 | 0.0 | |
| 224114936 | 851 | predicted protein [Populus trichocarpa] | 0.868 | 0.734 | 0.651 | 0.0 | |
| 357452949 | 875 | SPA1-like protein [Medicago truncatula] | 0.884 | 0.728 | 0.631 | 0.0 | |
| 224128308 | 857 | predicted protein [Populus trichocarpa] | 0.865 | 0.726 | 0.650 | 0.0 | |
| 357519507 | 814 | SPA1-like protein [Medicago truncatula] | 0.884 | 0.782 | 0.618 | 0.0 | |
| 449446929 | 850 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.833 | 0.705 | 0.670 | 0.0 | |
| 22331100 | 837 | ubiquitin-protein ligase RFWD2 [Arabidop | 0.840 | 0.722 | 0.570 | 0.0 |
| >gi|255585740|ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis] gi|223526576|gb|EEF28831.1| ubiquitin ligase protein cop1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/673 (68%), Positives = 546/673 (81%), Gaps = 16/673 (2%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
M+ S+SAWQ S++S ALN S SD NP G S D RK +D V L H
Sbjct: 1 MKDLSESAWQKSNNSGALNTSRASDWNP-----------GPLSRDSVFRKKTDRVVLAHH 49
Query: 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134
+ L+NQ GLSG ++E A+DPF AIEWGDVSLRQWLDKP+RSVD +ECLHIFRQIV IV
Sbjct: 50 N-LKNQVGLSGGYKDEVAVDPFARAIEWGDVSLRQWLDKPERSVDEFECLHIFRQIVGIV 108
Query: 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194
AHSQGIVVHNVRPSCFVM+SFNHVSFIESASCSDSGSDS E+GLN++ +E K+ SS L
Sbjct: 109 NLAHSQGIVVHNVRPSCFVMTSFNHVSFIESASCSDSGSDSLEDGLNSRTLEVKNPSSLL 168
Query: 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254
P D+ Q RTRLR ED Q + P N LSEASC+QSSS + THV + E +E K D +
Sbjct: 169 PNDIFQLRTRLRSEDFQPASTPINALSEASCIQSSSVHATHVPVGENTEEDKANDRTIIE 228
Query: 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 314
++ EE+KQPFPMKQILLMET+WY SPEE G+P SCASDIYRLGVLLFELFCPFS+ E+K
Sbjct: 229 QEEEERKQPFPMKQILLMETSWYTSPEEATGSPSSCASDIYRLGVLLFELFCPFSSREDK 288
Query: 315 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHPEPS RPKM ELLQSEFLNEPR+++EER
Sbjct: 289 SRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPKMCELLQSEFLNEPRENLEER 348
Query: 375 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 434
EAAI+L E+I+E++LLL+FLLL+QQRKQE+A KLQD VS +CSDIEEV K + L+KKG
Sbjct: 349 EAAIQLSERIEEQDLLLDFLLLIQQRKQEAADKLQDTVSLLCSDIEEVLKHRTFLKKKG- 407
Query: 435 LGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHN 494
GS E DD N+P +I+DND S+++GSRKRFRP +Q+ ++EE DDN DD Q +
Sbjct: 408 -GSCLERMKDDNLVSNLPPFSIVDNDDSSSLGSRKRFRPGIQIFNMEEFDDNRDDAQHSD 466
Query: 495 L-TGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN 553
+ T +++ L KSSRLMKNFKKLESAYFLTRCRP++ SG+P +R+S +SSDGR S +V+
Sbjct: 467 MVTESQDSLLLKSSRLMKNFKKLESAYFLTRCRPIRSSGKPFIRYSPISSDGRGST-VVS 525
Query: 554 ERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSL 613
ERSSINNL KE + E R+SGWI+PFLEGLCKYLSF+KL++KADL QGDLLNSSNLVCSL
Sbjct: 526 ERSSINNLAPKEQHVESRQSGWISPFLEGLCKYLSFNKLKIKADLKQGDLLNSSNLVCSL 585
Query: 614 SFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 673
SFDRDGE FA AGVNKKIK+FECDAIINENRDIHYPVVE+A+RSKLSS+CWNSYIKSQIA
Sbjct: 586 SFDRDGEFFATAGVNKKIKIFECDAIINENRDIHYPVVEIATRSKLSSVCWNSYIKSQIA 645
Query: 674 SSNFEGVVQVGQV 686
SSNFEGVVQV +
Sbjct: 646 SSNFEGVVQVWDI 658
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493656|ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/681 (66%), Positives = 531/681 (77%), Gaps = 16/681 (2%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVS-DRNPRLLRGERFGVRGDDSND---FELRKHSDGVE 70
MEGSS+S W++SD SR LN+S VS RNPR R G+ G S+D RK D V
Sbjct: 1 MEGSSESGWRNSDISRGLNVSIVSHGRNPRQRHANRIGLSGGASHDSGFISGRKERDHVL 60
Query: 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQI 130
+H + +NQ G+S VC+++ A+DPFV AIEWGDVSLR WLDKP+R VD ECLHIF QI
Sbjct: 61 SSHTKNHKNQVGISQVCDDDVALDPFVRAIEWGDVSLRHWLDKPERRVDALECLHIFTQI 120
Query: 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDL 190
EIV AAHSQG+VV+NVRPSCFVMSSFNHVSFIES SCSDSGSDS E+G N+ E L
Sbjct: 121 AEIVNAAHSQGVVVNNVRPSCFVMSSFNHVSFIESVSCSDSGSDSLEDGSNSHTEEDNGL 180
Query: 191 SSPLPLDMLQRRTRLRREDLQLVTAPTND----LSEASCMQSSSAYGTHVVLVEGMQEHK 246
SS LP D+ R++R ED PTN LSE SCMQSSS THV LVE +E+K
Sbjct: 181 SS-LPDDLHLRKSRSGNEDFLPTIMPTNASQIVLSETSCMQSSSVSATHVTLVEDREEYK 239
Query: 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306
D R +VEQ EEKKQ FPMK+ILLMETNWY SPEE++GA SCASDIY+LGVLLFELFC
Sbjct: 240 STDRR-SVEQSEEKKQTFPMKEILLMETNWYTSPEEISGAQTSCASDIYQLGVLLFELFC 298
Query: 307 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366
FS+ EEK+RTMS LRHRVLPPQLLLK+PKEASFCLWLLHPEPS RPK+ EL QSEFL E
Sbjct: 299 TFSSREEKSRTMSCLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPKISELFQSEFLTE 358
Query: 367 PRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQ 426
PRD MEEREAAIELRE+I+E+ELLLEFLLL+QQRKQ + KLQD +SF+ SDIEEV KQQ
Sbjct: 359 PRDKMEEREAAIELRERIEEQELLLEFLLLMQQRKQGAVDKLQDTISFLSSDIEEVGKQQ 418
Query: 427 AILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDN 486
A LRK+G GS+ EL DD S ++ +++ +N+ S ++ S KRFR +HH++E DD
Sbjct: 419 ATLRKRG--GSYQELVKDDQSTSDLSPMDVDENEDSTSVRSSKRFRQ--GVHHIKELDDT 474
Query: 487 LDDNQKHNLTG-NEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDG 545
L++ QK + N E + KSSRLMKNFKKLESAY LTR +P KPSG+P + S SS+G
Sbjct: 475 LNNGQKLGMNAENPEILISKSSRLMKNFKKLESAYLLTRRKPTKPSGKPSNKISPPSSNG 534
Query: 546 RTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLN 605
R S +V ERSS+NNL SK+ Y+E +SGWINPFL+GLCKYLSFSKL+VKADL QGDLLN
Sbjct: 535 RGS-IVVTERSSVNNLASKDQYNEHGQSGWINPFLDGLCKYLSFSKLKVKADLKQGDLLN 593
Query: 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 665
SSNLVCS+SFDRDGELFA AGVNKKIKVFEC++I+NE+RDIHYP+VEMA RSKLSSICWN
Sbjct: 594 SSNLVCSVSFDRDGELFATAGVNKKIKVFECNSILNEDRDIHYPLVEMACRSKLSSICWN 653
Query: 666 SYIKSQIASSNFEGVVQVGQV 686
SYIKSQIASSNFEGVVQV V
Sbjct: 654 SYIKSQIASSNFEGVVQVWDV 674
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542282|ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/674 (66%), Positives = 524/674 (77%), Gaps = 16/674 (2%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
MEGSS SA+ +S SSRALN SGVSDRN R+ +R G+ S D RK D V L G
Sbjct: 1 MEGSSGSAFHNSGSSRALNSSGVSDRNQRVHCPQRNPFSGEASQDSGFRKERDRVLLAQG 60
Query: 75 DHLRN-QGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 133
+N GG SG+CE+E +DPF A+EWGD+SLRQWLDKP+RSVD +ECLHIFRQIVEI
Sbjct: 61 GQPKNLGGGFSGLCEDEVEVDPFFCAVEWGDISLRQWLDKPERSVDAFECLHIFRQIVEI 120
Query: 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193
V AHSQG+VVHNVRPSCFVMSSFNH+SFIESASCSD+GSDS +G+N Q E K +S
Sbjct: 121 VSVAHSQGVVVHNVRPSCFVMSSFNHISFIESASCSDTGSDSLGDGMNNQGGEVKTPTSL 180
Query: 194 LPLDMLQRRTRLRRED-LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252
P DM Q+ L ED + + T+ T S++SCM SS+ Y L+E +E+K+ D R
Sbjct: 181 CPHDMHQQS--LGSEDFMPIKTSTTPARSDSSCMLSSAVYAARASLIEETEENKMKDRRK 238
Query: 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGE 312
+ E+VE KKQ FPMKQILLME +WY SPEE AG SCASD+YRLGVLLFELFCP S+ E
Sbjct: 239 D-EEVEGKKQSFPMKQILLMEMSWYTSPEEGAGESSSCASDVYRLGVLLFELFCPLSSRE 297
Query: 313 EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372
EK+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHP+P RP +GELLQSEFLNE RD E
Sbjct: 298 EKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPKSRPTLGELLQSEFLNEQRDDTE 357
Query: 373 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
EREAAIELR++I+++ELLLEFLLL+QQRKQE A+KLQ VSF+CSDIEEV+KQ ++
Sbjct: 358 EREAAIELRQRIEDQELLLEFLLLLQQRKQEVAEKLQHTVSFLCSDIEEVTKQHVRFKEI 417
Query: 433 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQK 492
G AEL +D+ S + PS+ +D++ SA +G+RKR R + + ++EECDD++ D+QK
Sbjct: 418 TG----AELGSDERSASSFPSMTFVDSEDSAFLGTRKRVRLGMDVKNIEECDDDVGDDQK 473
Query: 493 HNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLV 552
N + L KSSRLMKNFKKLESAYFLTRCRP SG+ VRH ++SDGR S +V
Sbjct: 474 SNGS-----FLSKSSRLMKNFKKLESAYFLTRCRPAYSSGKLAVRHPPVTSDGRGSV-VV 527
Query: 553 NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCS 612
ERS IN+L SKE EG S WINPFLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCS
Sbjct: 528 TERSCINDLKSKEQCREG-ASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCS 586
Query: 613 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 672
LSFDRDGE FA AGVNKKIKVFECD+IINE+RDIHYPVVEMASRSKLSSICWN+YIKSQI
Sbjct: 587 LSFDRDGEFFATAGVNKKIKVFECDSIINEDRDIHYPVVEMASRSKLSSICWNTYIKSQI 646
Query: 673 ASSNFEGVVQVGQV 686
ASSNFEGVVQ+ V
Sbjct: 647 ASSNFEGVVQLWDV 660
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356546870|ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/670 (66%), Positives = 520/670 (77%), Gaps = 16/670 (2%)
Query: 19 SDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLR 78
S SA+Q+S SSRALN SGVSDRN R+ +R G+ S D RK D L G +
Sbjct: 6 SGSAFQNSGSSRALNSSGVSDRNQRVHCPQRNPFLGEASQDSGFRKERDRFLLAQGGQPK 65
Query: 79 N-QGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137
N GG SG+CE+E +DPF A+EWGD+SLRQWLDKP+RSV +ECLHIFRQIVEIV A
Sbjct: 66 NLGGGFSGLCEDEVEVDPFFCAVEWGDISLRQWLDKPERSVGAFECLHIFRQIVEIVSVA 125
Query: 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197
HSQG+VVHNVRPSCFVMSSFNH+SFIESASCSD+GSDS EGLN Q E K +S P D
Sbjct: 126 HSQGVVVHNVRPSCFVMSSFNHISFIESASCSDTGSDSLGEGLNNQGGEVKTPTSLCPHD 185
Query: 198 MLQRRTRLRREDLQLV-TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQ 256
M Q+ + ED V T T S++SCM SS+ Y L+E +E+K+ D R + ++
Sbjct: 186 MPQQS--MGSEDFMPVKTLTTPAQSDSSCMLSSAVYAARASLIEETEENKMKDRRKD-DE 242
Query: 257 VEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTR 316
VE KKQ FPMKQILLME +WY SPEE AG SCASD+YRLGVLLFELFCP S+ EEK+R
Sbjct: 243 VEGKKQSFPMKQILLMEMSWYTSPEEGAGESSSCASDVYRLGVLLFELFCPLSSREEKSR 302
Query: 317 TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREA 376
TMSSLRHRVLPPQLLLK+PKEASFCLWLLHP+PSGRP +GELLQS+FLNE RD MEEREA
Sbjct: 303 TMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSGRPTLGELLQSDFLNEQRDDMEEREA 362
Query: 377 AIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLG 436
AIELR++ID++ELLLEFLLL+QQRKQE A+KLQ VSF+CSDIEEV+KQ ++ G
Sbjct: 363 AIELRQRIDDQELLLEFLLLLQQRKQEVAEKLQHTVSFLCSDIEEVTKQHVRFKEITG-- 420
Query: 437 SFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLT 496
AEL +D+ S + PS+ ++D++ SA +G+RKR R + + ++EEC D++ D+QK N +
Sbjct: 421 --AELGSDEHSASSFPSMTVVDSEGSAFLGTRKRVRLGMDVKNIEECVDDVGDDQKSNGS 478
Query: 497 GNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERS 556
L KSSRLMKNFKKLESAYFLTRCRP SG+ VRH ++SDGR S ++ ERS
Sbjct: 479 -----FLSKSSRLMKNFKKLESAYFLTRCRPAYSSGKLAVRHPPVTSDGRGSV-VMTERS 532
Query: 557 SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFD 616
IN+L SKE EG S WINPFLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCSLSFD
Sbjct: 533 CINDLKSKEQCREG-ASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFD 591
Query: 617 RDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 676
RDGE FA AGVNKKIKVFECD+IINE+RDIHYPVVEMASRSKLSSICWN+YIKSQIASSN
Sbjct: 592 RDGEFFATAGVNKKIKVFECDSIINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSN 651
Query: 677 FEGVVQVGQV 686
FEGVVQ+ V
Sbjct: 652 FEGVVQLWDV 661
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224114936|ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|222859962|gb|EEE97509.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/675 (65%), Positives = 521/675 (77%), Gaps = 50/675 (7%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
MEGSS+SAWQ SDS R N S VS+RN +R N ++ +D V L
Sbjct: 1 MEGSSESAWQKSDSHREFNTSVVSNRN----------LRSTSHNSGFRKERTDRVVLAR- 49
Query: 75 DHLRNQGG-LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 133
+L+NQ G LSGVCE+EAA+D F+ IEW DVSLR WLDKP+RSV+ +EC HIFRQ+VE+
Sbjct: 50 QNLKNQAGTLSGVCEDEAAVDRFMQTIEWNDVSLRHWLDKPQRSVNEFECSHIFRQVVEV 109
Query: 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193
V AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS ++GLN++ ME K+ SS
Sbjct: 110 VNVAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSLDDGLNSETMEVKNSSSS 169
Query: 194 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 253
LP DM Q+R +V LVE +EHK+ D R N
Sbjct: 170 LPHDMCQQR--------------------------------NVPLVEETEEHKVHDMR-N 196
Query: 254 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEE 313
VE EE+KQPFPMKQILLME+ WY SPEE AG+P SCASDIYRLGVLLFELFCPF++ E+
Sbjct: 197 VEHEEERKQPFPMKQILLMESCWYTSPEEDAGSPSSCASDIYRLGVLLFELFCPFTSSED 256
Query: 314 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373
K+RTMSSLRHRVLPPQLLLK+ KEASFCLWLLHPEPS RPK+GELLQS+FLNEP +++EE
Sbjct: 257 KSRTMSSLRHRVLPPQLLLKWSKEASFCLWLLHPEPSSRPKIGELLQSDFLNEPINNLEE 316
Query: 374 REAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKG 433
EAA +LRE+I+E+ELLLEFLLL+QQRKQ++A KLQD +S +CSDIEEV+K Q L+KKG
Sbjct: 317 LEAATQLRERIEEQELLLEFLLLIQQRKQDAADKLQDTISLLCSDIEEVTKHQVFLKKKG 376
Query: 434 GLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKH 493
+ E D NIP+LN++D D S+++GSRKRF P L++H++E+CDDNLD++Q
Sbjct: 377 --DTCKERGEGDHLTSNIPALNVVDIDDSSSLGSRKRFCPGLEIHNVEKCDDNLDESQNS 434
Query: 494 N-LTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRP-LVRHSQLSSDGRTSKPL 551
+ ++E LF+SSRLMKNFKKLESAYFLTRCRPV+P G+P R+ + SDGR S +
Sbjct: 435 DTFVESQESPLFRSSRLMKNFKKLESAYFLTRCRPVRPPGKPSFARNLPVISDGRISI-V 493
Query: 552 VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVC 611
ERSSIN++ K+ ++EGRRSGWI+PFLEGLCKYLSFSKL+VKADL QGDLLNSSNLVC
Sbjct: 494 ATERSSINSIAPKQQFTEGRRSGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVC 553
Query: 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 671
S+SFDRDGE FA AGVNKKIKVFECD IINE RDIHYPVVEM RSKLSSICWNSYIKSQ
Sbjct: 554 SISFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVCRSKLSSICWNSYIKSQ 613
Query: 672 IASSNFEGVVQVGQV 686
+ASSNFEGVVQV V
Sbjct: 614 LASSNFEGVVQVWDV 628
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357452949|ref|XP_003596751.1| SPA1-like protein [Medicago truncatula] gi|355485799|gb|AES67002.1| SPA1-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/668 (63%), Positives = 507/668 (75%), Gaps = 31/668 (4%)
Query: 24 QDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGL 83
++S+SSRALN SGVSDRN R G+ S D RK D + GD +N GG
Sbjct: 3 ENSESSRALNSSGVSDRNQR-----ENPFSGEGSQDSRFRKERDWIHGAQGDQNKNLGGF 57
Query: 84 SGVCENEAA-IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142
CE E DPF ++EWGD+SLRQWLDKP RSVD +ECLHIFRQIVEIV AAH QG+
Sbjct: 58 ---CEGEEVENDPFFSSVEWGDISLRQWLDKPDRSVDFFECLHIFRQIVEIVNAAHCQGV 114
Query: 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNT-QNMETKDLSSPLPLDMLQR 201
VVHNVRPSCFVMSSFNH+SFIESASCSD+ SDS +G+N Q +E K +S P D++ +
Sbjct: 115 VVHNVRPSCFVMSSFNHISFIESASCSDTSSDSLGDGVNNDQGVEVKTPTSHCPRDIMHQ 174
Query: 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKK 261
++ ED T+ S++SCM SS+ Y L+E +E+K+ D R + E+VE KK
Sbjct: 175 QS-FGSEDFMPAKISTDARSDSSCMLSSAVYAARASLIEETEENKMKDMRKD-EEVEGKK 232
Query: 262 QPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSL 321
Q FPMKQILLME +WY SPEE+AG P SCASD+YRLG+LLFELFCP S+ EEK+RTMSSL
Sbjct: 233 QSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFCPLSSREEKSRTMSSL 292
Query: 322 RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELR 381
RHRVLPPQLLLK+PKEASFCLWLLHP+PS RP +GELLQSEFLNE RD MEEREAAIELR
Sbjct: 293 RHRVLPPQLLLKWPKEASFCLWLLHPDPSSRPTLGELLQSEFLNEQRDDMEEREAAIELR 352
Query: 382 EQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAEL 441
++I++EELLLEFL L++QRKQE A+KLQ +SF+CSDIEEV+K+Q ++ G+ EL
Sbjct: 353 QKIEDEELLLEFLSLLKQRKQEVAEKLQHTISFLCSDIEEVTKKQTRFKEIAGV----EL 408
Query: 442 -ANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEE 500
+DD S PS+ +ID++ SA +G+RKR R + HL+ECDDN++ +QK N
Sbjct: 409 GGSDDRSASTFPSMTVIDSEDSACLGTRKRVRLGM---HLDECDDNMESDQK-----NHG 460
Query: 501 RSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINN 560
L K+SRLMKNFKKLESAYFLTRC+P SGRP VRHS +++ GR S +++ERS IN+
Sbjct: 461 SFLSKNSRLMKNFKKLESAYFLTRCKPTYSSGRPGVRHSTIANGGRGS-VVMSERSCINS 519
Query: 561 LGSKEGYSEGR--RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD 618
L K+ +GR S WINPFLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCSLSFDRD
Sbjct: 520 LALKD---QGRDSASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRD 576
Query: 619 GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 678
GE FA AGVNKKIK+FECD II +RDIHYPVVEMA RSKLSS+CWN+YIKSQIASSNFE
Sbjct: 577 GEFFATAGVNKKIKIFECDTIIKGDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASSNFE 636
Query: 679 GVVQVGQV 686
GVVQ+ V
Sbjct: 637 GVVQLWDV 644
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128308|ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/675 (65%), Positives = 511/675 (75%), Gaps = 52/675 (7%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
MEGSS+SAWQ S S R N S V++RN R S + RK +D V L
Sbjct: 1 MEGSSESAWQKSGSYRGFNTSVVTNRNLR-----------SASYNSGFRKETDRVVLAR- 48
Query: 75 DHLRNQGG-LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 133
+L+NQ G LSGVCE+EAA+D FV +EW DVSLR WL+KP+RSVD +ECLHIFRQIVEI
Sbjct: 49 QNLKNQAGTLSGVCEDEAAVDHFVQNMEWNDVSLRHWLNKPERSVDEFECLHIFRQIVEI 108
Query: 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193
V AHSQGIVVHNVRPSCFVMSSFNHVSFIESAS SDSGSDS ++GLN Q +E K+ SS
Sbjct: 109 VNVAHSQGIVVHNVRPSCFVMSSFNHVSFIESASYSDSGSDSLDDGLNRQTVEVKNASS- 167
Query: 194 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 253
DM Q+R ++ L E +E+K+L R N
Sbjct: 168 FSHDMCQQR--------------------------------NLPLGEETEENKVLGTR-N 194
Query: 254 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEE 313
VE EE+KQPFPMKQILLME++WY SPEE+AG+P SCASDIY+LGVLLFELF PF++ E+
Sbjct: 195 VEHEEERKQPFPMKQILLMESSWYTSPEEVAGSPSSCASDIYQLGVLLFELFSPFTSRED 254
Query: 314 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373
K+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHPEPS RPKMGELLQSEFLNEPRD +EE
Sbjct: 255 KSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPKMGELLQSEFLNEPRDYLEE 314
Query: 374 REAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKG 433
REAAI+LRE+I+E+ELLLEFLL +QQRKQ++A KLQ VS +CSDIEEV+K Q L+KKG
Sbjct: 315 REAAIQLRERIEEQELLLEFLLPMQQRKQDAANKLQGTVSLLCSDIEEVTKHQTFLKKKG 374
Query: 434 GLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKH 493
+ E D N+P LNI D D S+++GSRKRF LQ+ + E CDDNL++ +
Sbjct: 375 --STCKERGEGDHLASNLPPLNIYDIDDSSSLGSRKRFCSGLQILNTEGCDDNLNEGRNS 432
Query: 494 N-LTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGR-PLVRHSQLSSDGRTSKPL 551
+ ++E LF+SSRLMKNFKKLESAYFLTR RPV+P G+ P VR+S +S DGR S +
Sbjct: 433 DTFVESQESPLFRSSRLMKNFKKLESAYFLTRSRPVRPPGKPPFVRNSPVSGDGRGSI-V 491
Query: 552 VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVC 611
V ERSSIN+L K+ + +GR+SGWI+PFLEGLCKYLS+SKL+VKADL QGDLLNSSNLVC
Sbjct: 492 VTERSSINSLALKDRFIKGRQSGWISPFLEGLCKYLSYSKLKVKADLKQGDLLNSSNLVC 551
Query: 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 671
SLSFDRDGE FA AGVNKKIKVFECD IINE RDIHYPVVEM SRSKLSSICWN YI SQ
Sbjct: 552 SLSFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVSRSKLSSICWNRYITSQ 611
Query: 672 IASSNFEGVVQVGQV 686
IASSNFEGVVQV V
Sbjct: 612 IASSNFEGVVQVWDV 626
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357519507|ref|XP_003630042.1| SPA1-like protein [Medicago truncatula] gi|355524064|gb|AET04518.1| SPA1-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/671 (61%), Positives = 501/671 (74%), Gaps = 34/671 (5%)
Query: 24 QDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGL 83
++S+SSRALN SGVSDRN R G+ S D RK D + GD +N GG
Sbjct: 3 ENSESSRALNSSGVSDRNQR-----ENPFSGEGSQDSRFRKERDWIHGAQGDQNKNLGGF 57
Query: 84 SGVCENEAA-IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142
CE E DPF ++EWGD+SLRQWLDKP RSVD +ECLHIFRQIVEIV AAH QG+
Sbjct: 58 ---CEGEEVENDPFFSSVEWGDISLRQWLDKPDRSVDFFECLHIFRQIVEIVNAAHCQGV 114
Query: 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNT-QNMETKDLSSPLPLDMLQR 201
VVHNVRPSCFVMSSFNH+SFIESASCSD+ SDS +G+N Q +E K +S P D++ +
Sbjct: 115 VVHNVRPSCFVMSSFNHISFIESASCSDTSSDSLGDGVNNDQGVEVKTPTSHCPRDIMHQ 174
Query: 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKK 261
++ ED T+ S++SCM SS+ Y L+E +E+K+ D R + E+VE KK
Sbjct: 175 QS-FGSEDFMPAKISTDARSDSSCMLSSAVYAARASLIEETEENKMKDMRKD-EEVEGKK 232
Query: 262 QPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSL 321
Q FPMKQILLME +WY SPEE+AG P SCASD+YRLG+LLFELFCP S+ EEK+RTMSSL
Sbjct: 233 QSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFCPLSSREEKSRTMSSL 292
Query: 322 RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL---LQSEFLNEPRDSMEEREAAI 378
RHRVLPPQLLLK+PKEASFCLWLLHP+PS RP +G L + NE RD MEEREAAI
Sbjct: 293 RHRVLPPQLLLKWPKEASFCLWLLHPDPSSRPTLGSLQGVVAERVPNEQRDDMEEREAAI 352
Query: 379 ELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSF 438
ELR++I++EELLLEFL L++QRKQE A+KLQ +SF+CSDIEEV+K+Q ++ G+
Sbjct: 353 ELRQKIEDEELLLEFLSLLKQRKQEVAEKLQHTISFLCSDIEEVTKKQTRFKEIAGV--- 409
Query: 439 AELA-NDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTG 497
EL +DD S PS+ +ID++ SA +G+RKR R + HL+ECDDN++ +QK
Sbjct: 410 -ELGGSDDRSASTFPSMTVIDSEDSACLGTRKRVRLGM---HLDECDDNMESDQK----- 460
Query: 498 NEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSS 557
N L K+SRLMKNFKKLESAYFLTRC+P SGRP VRHS +++ GR S +++ERS
Sbjct: 461 NHGSFLSKNSRLMKNFKKLESAYFLTRCKPTYSSGRPGVRHSTIANGGRGS-VVMSERSC 519
Query: 558 INNLGSKEGYSEGR--RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSF 615
IN+L K+ +GR S WINPFLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCSLSF
Sbjct: 520 INSLALKD---QGRDSASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSF 576
Query: 616 DRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 675
DRDGE FA AGVNKKIK+FECD II +RDIHYPVVEMA RSKLSS+CWN+YIKSQIASS
Sbjct: 577 DRDGEFFATAGVNKKIKIFECDTIIKGDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASS 636
Query: 676 NFEGVVQVGQV 686
NFEGVVQ+ V
Sbjct: 637 NFEGVVQLWDV 647
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446929|ref|XP_004141223.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus] gi|449498653|ref|XP_004160596.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/613 (67%), Positives = 475/613 (77%), Gaps = 13/613 (2%)
Query: 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134
DHLRN +SGVCE + DP++ + +W D+SLRQWLDKP RSVD ECLHIFRQIVEIV
Sbjct: 20 DHLRNLDDISGVCEEDILADPYLRSHKWSDISLRQWLDKPGRSVDALECLHIFRQIVEIV 79
Query: 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194
AH+QGIVVHNVRPSCFVMSSFNHV+FIESASCSDSGSDS E+G+N+Q E K SSP
Sbjct: 80 NIAHAQGIVVHNVRPSCFVMSSFNHVTFIESASCSDSGSDSLEDGINSQMAEVKTSSSPF 139
Query: 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254
P + L E + V P N LSE SCMQSSS Y L EG + + D R ++
Sbjct: 140 P-------SSLGSEGFRSVMTPINALSETSCMQSSSIYAAQASLNEGFGKFRKKDRR-HI 191
Query: 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 314
E+ E+K Q FPMKQIL MET WY SPEE + +P S ASDIYRLGVLLFELFC FS+ EEK
Sbjct: 192 EETEDKVQSFPMKQILAMETTWYTSPEEASDSPSSSASDIYRLGVLLFELFCSFSSREEK 251
Query: 315 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
RTMSSLRHRVLP QLLLK+PKEASFCLWLLHPEP+ RPK+ ELLQS FLNEP+D +EER
Sbjct: 252 NRTMSSLRHRVLPTQLLLKWPKEASFCLWLLHPEPTNRPKLSELLQSVFLNEPKDDLEER 311
Query: 375 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 434
EAAI+LR++I+E+ELLLEFLLL+QQRKQE+A KLQD +SF+CSDIE+V + Q +K
Sbjct: 312 EAAIKLRKKIEEQELLLEFLLLMQQRKQEAAHKLQDTISFLCSDIEQVMRHQTNFKK--N 369
Query: 435 LGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHN 494
+GS +L D+ LN+PS+ + N SA +GSRKRFRP + H +E C DNLD K +
Sbjct: 370 IGSHTDLVKDNHLPLNLPSMPPVRNTDSAALGSRKRFRPGILTHDIEACGDNLDHCSKTS 429
Query: 495 L-TGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN 553
NE+ LFKSSRLMKNFKKLE AYFL R R KPS R V+HS +SSDGR S L
Sbjct: 430 SENDNEQGVLFKSSRLMKNFKKLELAYFLMRGRVNKPS-RQFVKHSSVSSDGRGSVVLT- 487
Query: 554 ERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSL 613
ERSS+NNL SKE ++ R+ GWI+PFLEGLCKYLSFSKL+VKADL QGDLLNSSNLVCSL
Sbjct: 488 ERSSVNNLASKESCNDNRQGGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSL 547
Query: 614 SFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 673
SFDRDGE FA AGVN+KIKVF D+I+NE+RDIHYPVVEMASRSKLSS+CWN YIKSQIA
Sbjct: 548 SFDRDGEFFATAGVNRKIKVFGYDSIVNEDRDIHYPVVEMASRSKLSSVCWNRYIKSQIA 607
Query: 674 SSNFEGVVQVGQV 686
SSNFEGVVQV V
Sbjct: 608 SSNFEGVVQVWDV 620
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22331100|ref|NP_683567.1| ubiquitin-protein ligase RFWD2 [Arabidopsis thaliana] gi|332642126|gb|AEE75647.1| ubiquitin-protein ligase RFWD2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/680 (57%), Positives = 483/680 (71%), Gaps = 75/680 (11%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
MEGSS+S +SR N SGVSDRN L ER R S+ + + V G
Sbjct: 1 MEGSSNS------NSRGFNTSGVSDRNTEFLPVERLTTRSKPSSHVD-----EYVRSLFG 49
Query: 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134
++ G ++ IDPFV ++EWGDVSLRQWLDKP+RSVDV+ECLH+FRQIVEIV
Sbjct: 50 STSTHKSGE----DDSLGIDPFVRSLEWGDVSLRQWLDKPERSVDVFECLHVFRQIVEIV 105
Query: 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194
AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS E+G +Q K++ S
Sbjct: 106 NAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSLEDGPISQ----KEIGSS- 160
Query: 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254
RRE+ +S+A ++ Y +K+L+ ++
Sbjct: 161 -----------RREEA---------VSKAIAIEEKGVY------------NKLLERKIEK 188
Query: 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 314
+ EEK QPFPMK IL MET+WY SPEE G+ +CASD+YRLGVLLFELFCP + EEK
Sbjct: 189 LE-EEKTQPFPMKHILAMETSWYTSPEEDFGSSSTCASDVYRLGVLLFELFCPVPSREEK 247
Query: 315 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+RTMSSLRHRVLPPQ+LLK PKEASFCLWLLHPEP+ RP M +LLQSEF+ EPRD++EER
Sbjct: 248 SRTMSSLRHRVLPPQILLKCPKEASFCLWLLHPEPTCRPSMSDLLQSEFITEPRDNLEER 307
Query: 375 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 434
EAAIELR++I+E+E LLEFLLL+QQRKQESA +LQD VS + SDIE+V K+Q IL+K+G
Sbjct: 308 EAAIELRDRIEEQESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILKKRG- 366
Query: 435 LGSFAELANDD---LSGLNIPSLNIIDNDCSATMGSRKRFRPE-LQLHHLEECDDNLDDN 490
S ++ + DD SG + S + + SA + SRKR R L L + E D+
Sbjct: 367 -SSLSDFSKDDHQYTSGQPLMSFQ-ANEEPSAFLASRKRVRQGILALENGVEVDEE---- 420
Query: 491 QKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVK--PSGRPLVRHSQLSSDGRTS 548
++ +L +SSRLM+NFKKLES YFLTR R +K SG+ L RHS LSS+
Sbjct: 421 -------SQGSTLLESSRLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRG 473
Query: 549 KPLVNERSSINNLGSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNS 606
+V+E+SS++N + + + ++ R+ GWI+PFLEGLC+YLSFS+LRVKADL QGDLLNS
Sbjct: 474 SMIVSEKSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNS 533
Query: 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 666
SNLVC+L+FDR+GELFA AGVNKKIK+FEC++I+N+NRDIHYPVVE+A RSKLSS+CWNS
Sbjct: 534 SNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNS 593
Query: 667 YIKSQIASSNFEGVVQVGQV 686
YIKSQIASSNF+GVVQ+ V
Sbjct: 594 YIKSQIASSNFDGVVQIWDV 613
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 720 | ||||||
| TAIR|locus:2037005 | 794 | SPA4 "SPA1-related 4" [Arabido | 0.297 | 0.269 | 0.578 | 1.3e-122 | |
| TAIR|locus:2136133 | 1036 | SPA2 "SPA1-related 2" [Arabido | 0.468 | 0.325 | 0.310 | 2e-62 | |
| TAIR|locus:2039139 | 1029 | SPA1 "SUPPRESSOR OF PHYA-105 1 | 0.416 | 0.291 | 0.333 | 3.4e-60 | |
| TAIR|locus:2059359 | 675 | COP1 "CONSTITUTIVE PHOTOMORPHO | 0.195 | 0.208 | 0.401 | 1.3e-18 | |
| DICTYBASE|DDB_G0288453 | 970 | DDB_G0288453 "E3 ubiquitin-pro | 0.176 | 0.130 | 0.424 | 2.1e-18 | |
| UNIPROTKB|H0Y339 | 566 | RFWD2 "E3 ubiquitin-protein li | 0.156 | 0.199 | 0.412 | 1.4e-14 | |
| RGD|1304773 | 433 | Rfwd2 "ring finger and WD repe | 0.156 | 0.260 | 0.403 | 2.4e-14 | |
| ZFIN|ZDB-GENE-070410-134 | 694 | rfwd2 "ring finger and WD repe | 0.156 | 0.162 | 0.421 | 5.4e-14 | |
| UNIPROTKB|Q8NHY2 | 731 | RFWD2 "E3 ubiquitin-protein li | 0.156 | 0.154 | 0.412 | 1.2e-13 | |
| UNIPROTKB|F1MHX1 | 735 | RFWD2 "Uncharacterized protein | 0.156 | 0.153 | 0.403 | 2.2e-13 |
| TAIR|locus:2037005 SPA4 "SPA1-related 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 617 (222.3 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 125/216 (57%), Positives = 154/216 (71%)
Query: 220 LSEASCMQSSSAYG--THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277
+ ASC S S T + ++ +IL R + +Q E KKQPFPMKQIL ME +WY
Sbjct: 122 IESASCSDSGSDEDATTKSREIGSSRQEEILSERRSKQQEEVKKQPFPMKQILAMEMSWY 181
Query: 278 ASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE 337
S EE G+ +CASDIYRLGVLLFELFCP S+ EEK+RTMSSLRHRVLPPQ+LL +PKE
Sbjct: 182 TSHEEDNGSLCNCASDIYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKE 241
Query: 338 ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIXXXXXXXXXXXXXXXXXXV 397
ASFCLWLLHPEPS RP M ELLQSEF+NEPR+++EEREAA+ +
Sbjct: 242 ASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLI 301
Query: 398 QQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKG 433
QQRKQE+A KLQD +S + SDI++V K+Q +L++KG
Sbjct: 302 QQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQKG 337
|
|
| TAIR|locus:2136133 SPA2 "SPA1-related 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 401 (146.2 bits), Expect = 2.0e-62, Sum P(2) = 2.0e-62
Identities = 111/357 (31%), Positives = 175/357 (49%)
Query: 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 164
+SLR+WL ++ V+ EC++IFRQIV+ V +HSQG+V+ ++RPS F + N V ++
Sbjct: 301 LSLREWLKSERQEVNKAECMYIFRQIVDHVDCSHSQGVVLCDLRPSSFKIFKENAVKYV- 359
Query: 165 XXXXXXXXXXXHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR-REDLQLVTAPTNDLSEA 223
+ +N + + L +PL L + L Q + P++ +
Sbjct: 360 ---VSGSQRESFDSNMNKETLS--QLENPLVRRRLGDTSSLSIPAKKQKSSGPSS--RQW 412
Query: 224 SCMQSSSAYGTHVVLVEG-MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 282
Q + +G +QE ++ + V PF L E WYASPEE
Sbjct: 413 PMFQRAGGVNIQTENNDGAIQEFHFRSSQPHCSTVA---CPFTSVSEQL-EEKWYASPEE 468
Query: 283 LAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCL 342
L G S +S+IY LG+LL+EL F + MS +RHR+LPP+ L + PKEA FCL
Sbjct: 469 LRGDMRSASSNIYSLGILLYELLSQFQCERAREAAMSDIRHRILPPKFLSENPKEAGFCL 528
Query: 343 WLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIXXXXXXXXXXXXXXXXXXVQQRKQ 402
WLLHPE S RP ++LQSE +N D E ++ Q+++Q
Sbjct: 529 WLLHPESSCRPSTRDILQSEVVNGIPDLYAEG-LSLSIEQEDTESELLQHFLFLSQEKRQ 587
Query: 403 ESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDN 459
+ A L + ++ + +DIEE+ K++ + G S E A+ ++P + +I N
Sbjct: 588 KHAGNLMEEIASVEADIEEIVKRRCAI----GPPSLEE-ASSSSPASSVPEMRLIRN 639
|
|
| TAIR|locus:2039139 SPA1 "SUPPRESSOR OF PHYA-105 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 369 (135.0 bits), Expect = 3.4e-60, Sum P(2) = 3.4e-60
Identities = 110/330 (33%), Positives = 164/330 (49%)
Query: 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 164
+SLR++L + L +FRQ+VE+V +AHS+ + + ++RPS F + + +I
Sbjct: 275 ISLREFLRSSYAKREKRHGLCLFRQLVELVDSAHSKRLFLLDLRPSLFTLVPSKKLRYIG 334
Query: 165 XXXXXXXXXXXHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224
E+ LN + ++ SS R ++ R+ DL L +P N L S
Sbjct: 335 NFGKNDLESDVDED-LNRRRPVVEESSSG------GRDSKKRKMDLHL-NSPGNQLQATS 386
Query: 225 C----MQSSSAYGTHVVLVEG-----MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 275
+ S ++V +Q+ + N ++V V K+ M L E
Sbjct: 387 TGRPFKRKSPVIDLNMVDARNPDSCELQQQDYIKN-LSVSSVSRKQS---MSTWL--EEQ 440
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFP 335
WY PEE+ G + S+IY LGVLLFEL C +GE M+ LRHR+LPP L K+P
Sbjct: 441 WYTCPEEINGEDIGEKSNIYALGVLLFELLCHCESGEMHAAMMADLRHRILPPTFLSKYP 500
Query: 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIXXXXXXXXXXXXXXXXX 395
KEA FCLWLLHPEPS RP ++L+SE + E DS++ AA
Sbjct: 501 KEAGFCLWLLHPEPSSRPSARDILKSELICED-DSVKSTAAA----EEISELLLHFLSSL 555
Query: 396 XVQQRKQESAKKLQDIVSFICSDIEEVSKQ 425
VQ++K+ S K LQDI + + DI+E ++
Sbjct: 556 EVQKKKKAS-KLLQDIQT-LEDDIKEAERR 583
|
|
| TAIR|locus:2059359 COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 257 (95.5 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 61/152 (40%), Positives = 89/152 (58%)
Query: 535 LVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV 594
L + QL+ D SK N++S + +EGYS G + F L + +S+LRV
Sbjct: 310 LQKRRQLA-DQPNSKQ-ENDKSVVR----REGYSNG-----LADFQSVLTTFTRYSRLRV 358
Query: 595 KADLNQGDXXXXXXXXXXXXFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 654
A++ GD FDRD ELFA AGV++ IKVF+ +++NE D+ P+VEM+
Sbjct: 359 IAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMS 418
Query: 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686
+RSKLS + WN + K+ IASS++EG+V V V
Sbjct: 419 TRSKLSCLSWNKHEKNHIASSDYEGIVTVWDV 450
|
|
| DICTYBASE|DDB_G0288453 DDB_G0288453 "E3 ubiquitin-protein ligase RFWD2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 260 (96.6 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 56/132 (42%), Positives = 79/132 (59%)
Query: 553 NERSSINNLGSK-EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDXXXXXXXXX 611
N S++NNL + E G+ G ++ F L K+ +++ +V A L GD
Sbjct: 615 NTNSNLNNLNNNIESLKVGK--GLLS-FSRNLLKFTKYNEFKVLATLKYGDLFNTSSIVS 671
Query: 612 XXXFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 671
FDRD E FA AGV KKIK+FE I +N ++H PV EM RSK+S + WN+YIKSQ
Sbjct: 672 SIEFDRDEEYFATAGVTKKIKIFEFSQI-RDNVEVHSPVKEMTCRSKISCLSWNTYIKSQ 730
Query: 672 IASSNFEGVVQV 683
IASS++EG++ +
Sbjct: 731 IASSDYEGIISL 742
|
|
| UNIPROTKB|H0Y339 RFWD2 "E3 ubiquitin-protein ligase RFWD2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 217 (81.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 47/114 (41%), Positives = 66/114 (57%)
Query: 569 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 627
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 217 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 276
Query: 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681
KKIKV+E D +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V
Sbjct: 277 TKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 330
|
|
| RGD|1304773 Rfwd2 "ring finger and WD repeat domain 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 210 (79.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 46/114 (40%), Positives = 65/114 (57%)
Query: 569 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 627
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 84 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 143
Query: 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681
KKIKV+E +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V
Sbjct: 144 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 197
|
|
| ZFIN|ZDB-GENE-070410-134 rfwd2 "ring finger and WD repeat domain 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 220 (82.5 bits), Expect = 5.4e-14, Sum P(3) = 5.4e-14
Identities = 48/114 (42%), Positives = 66/114 (57%)
Query: 569 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 627
+ R ++ F+E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 345 DSRTVNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 404
Query: 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681
KKIKVFE +I + DIHYPV EM SK+S I W+SY K+ +ASS++EG V
Sbjct: 405 TKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTV 458
|
|
| UNIPROTKB|Q8NHY2 RFWD2 "E3 ubiquitin-protein ligase RFWD2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 217 (81.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 47/114 (41%), Positives = 66/114 (57%)
Query: 569 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 627
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 382 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 441
Query: 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681
KKIKV+E D +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V
Sbjct: 442 TKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 495
|
|
| UNIPROTKB|F1MHX1 RFWD2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 210 (79.0 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 46/114 (40%), Positives = 65/114 (57%)
Query: 569 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 627
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 386 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 445
Query: 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681
KKIKV+E +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V
Sbjct: 446 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 499
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LJR3 | SPA3_ARATH | No assigned EC number | 0.5705 | 0.8402 | 0.7159 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XI3877 | hypothetical protein (851 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 720 | |||
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 0.0 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 9e-11 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 3e-09 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-09 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 6e-07 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-06 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-06 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-04 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 4e-04 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 0.002 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 0.002 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 0.003 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.003 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 687 bits (1773), Expect = 0.0
Identities = 364/681 (53%), Positives = 435/681 (63%), Gaps = 128/681 (18%)
Query: 15 MEGSSDSAWQDSDSSRAL-NISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTH 73
M+GSS+S +SR L N SGVS+ ++ + H D V
Sbjct: 1 MKGSSES------NSRGLNNTSGVSEFC---------------TDGSKSLSHIDYVRSLL 39
Query: 74 GDHLR-NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVE 132
G H N GL D V A+E DVSLRQWLD P RSVD +EC H+FRQIVE
Sbjct: 40 GSHKEGNLDGLD--------DDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVE 91
Query: 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 192
IV AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD E+ +++ S
Sbjct: 92 IVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD--EDATTKS----REIGS 145
Query: 193 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252
RRE+ IL R
Sbjct: 146 S------------RREE-------------------------------------ILSERR 156
Query: 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGE 312
+ E KKQPFPMKQIL ME +WY SPEE G+ +CASD+YRLGVLLFELFCP S+ E
Sbjct: 157 IEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE 216
Query: 313 EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372
EK+RTMSSLRHRVLPPQ+LL +PKEASFCLWLLHPEPS RP M ELLQSEF+NEPR+++E
Sbjct: 217 EKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLE 276
Query: 373 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
EREAA+ELR++I+E+ELLLEFL L+QQRKQE+A KLQD +S + SDI++V K+Q +L++K
Sbjct: 277 EREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQK 336
Query: 433 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRP-ELQLHHLEECDDNLDDNQ 491
G +D + + SRKR R L EE DDN
Sbjct: 337 G-------------------------SDVRSFLASRKRIRQGAETLAAEEENDDN----- 366
Query: 492 KHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG---RPLVRHSQLSS-DGRT 547
L E +L +SSRLM+N KKLES YF TR R +K + +PL R+ S +GR+
Sbjct: 367 SSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSENGRS 426
Query: 548 SKPLVNERSSINNLGSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLN 605
S E+SS++N + ++ R+ GWI+PFLEGLCKYLSFSKLRVKADL QGDLLN
Sbjct: 427 S-----EKSSMSNPAKPPDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLN 481
Query: 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 665
SSNLVC++ FDRDGE FA AGVNKKIK+FEC++II + RDIHYPVVE+ASRSKLS ICWN
Sbjct: 482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWN 541
Query: 666 SYIKSQIASSNFEGVVQVGQV 686
SYIKSQ+ASSNFEGVVQV V
Sbjct: 542 SYIKSQVASSNFEGVVQVWDV 562
|
Length = 793 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 62.5 bits (153), Expect = 9e-11
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLL 331
Y +PE L G A DI+ LGV+L+EL PF ++ + + P
Sbjct: 161 EYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPE 220
Query: 332 LKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
EA LL +P R E LQ F
Sbjct: 221 WDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 3e-09
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP---PQL 330
T Y +PE G P S SDI+ LG LL+E+ F+ E R+M LR++V P +
Sbjct: 164 TPHYMAPEVWKGRPYSYKSDIWSLGCLLYEM-ATFAPPFE-ARSMQDLRYKVQRGKYPPI 221
Query: 331 LLKFPKEAS-FCLWLLHPEPSGRPKMGELLQS 361
+ ++ F +L +P RP ++L S
Sbjct: 222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 4e-09
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 274 TNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 329
T WY +PE L G D++ LGV+L+EL PFS E L R+L P
Sbjct: 161 TPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFS--GENILDQLQLIRRILGPP 218
Query: 330 LLLKFPKE-------ASFCLWLLHPEPSGRPKMGELLQSEFL 364
L PK L+ +PS RP E+LQ +
Sbjct: 219 LEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 6e-07
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---PPQL 330
Y SPE P + SDI+ LG +L+EL PF + + L ++L P +
Sbjct: 169 YLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPF-----EGENLLELALKILKGQYPPI 223
Query: 331 LLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFL 364
++ E + LL +P RP + ++LQS F+
Sbjct: 224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 27/150 (18%)
Query: 219 DLSEASCMQSSSAYGTHVVLVE--GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276
DL+ +C+ SS T VV V GM + +LD+ E FP+K
Sbjct: 125 DLAARNCLVSS----TGVVKVSDFGMTRY-VLDD----EYTSSSGAKFPVK--------- 166
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC----PF-STGEEKTRTMSSLRHRVLPPQLL 331
++ PE + S SD++ GVL++E+F PF + M S R+ P+L
Sbjct: 167 WSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLA 226
Query: 332 LKFPKEASFCLWLLHPEPSGRPKMGELLQS 361
E + W H +P GRP ELL++
Sbjct: 227 SMTVYEVMYSCW--HEKPEGRPTFAELLRA 254
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 3e-06
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF---CPFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y SPE + G S A+DI+ LG+ L E PF + + ++ P L
Sbjct: 166 YMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS-FFELMQAICDGPPPSLP 224
Query: 334 FPKEAS--FCLWL---LHPEPSGRPKMGELLQSEFLNE 366
+E S F ++ L +P RP ELLQ F+ +
Sbjct: 225 -AEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 242 MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301
++E +LD V+ + P K ++ T Y +PE L G P S ++DIY LGV+L
Sbjct: 165 LEEEDLLDIDVDERNICYSSMTIPGK---IVGTPDYMAPERLLGVPASESTDIYALGVIL 221
Query: 302 FE-LFCPFSTGEEKTRTMSSLRHRVLPPQ 329
++ L F +K R + S R +L P
Sbjct: 222 YQMLTLSFPYRRKKGRKI-SYRDVILSPI 249
|
Length = 932 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 15/100 (15%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--PP 328
T Y SPE L P +SD++ LG +++++ PF E T + PP
Sbjct: 185 TAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-LTFQKILKLEYSFPP 243
Query: 329 QLLLKFPKEAS-FCLWLLHPEPSGRP----KMGELLQSEF 363
FP +A LL +P R EL F
Sbjct: 244 ----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.002
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMS---SLRHRVLP 327
T +Y +PE P S +D++ LGVLL+EL PF GE M + R+ LP
Sbjct: 208 TPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD-GENMEEVMHKTLAGRYDPLP 266
Query: 328 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359
P + P+ LL +P RP +LL
Sbjct: 267 PSI---SPEMQEIVTALLSSDPKRRPSSSKLL 295
|
Length = 496 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 266 MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF----CPFST-GEEKTRTMSS 320
+KQI + W A PE L + SD++ G+LL+E F P+ ++TR
Sbjct: 154 LKQIPI---KWTA-PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE 209
Query: 321 LRHRVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQS 361
+R+ PQL E + L L +P RP E+
Sbjct: 210 SGYRMPAPQLC----PEEIYRLMLQCWAYDPENRPSFSEIYNE 248
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 40.5 bits (93), Expect = 0.003
Identities = 25/117 (21%), Positives = 37/117 (31%), Gaps = 17/117 (14%)
Query: 274 TNWYASPEELAG---APVSCASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSLRHRV 325
T Y +PE L G A S +SDI+ LG+ L+EL T + +
Sbjct: 171 TPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL 230
Query: 326 LPPQLLLKFPKE---------ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373
P L + LL +P R L + L + +
Sbjct: 231 PTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESD 287
|
Length = 384 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.003
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFEL----FCPFSTGEEKTRTMSSLRHRVL--- 326
T+ Y +PE + G S SDI+ LG+ L EL F P+ + + L ++
Sbjct: 162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF-PYPPENDPPDGIFELLQYIVNEP 220
Query: 327 PPQLLL-KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLN 365
PP+L KF + F L +P RP ELL+ F+
Sbjct: 221 PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 720 | |||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.98 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.98 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.98 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.98 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.98 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.98 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.98 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.98 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.98 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.98 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.98 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.98 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.98 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.98 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.97 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.97 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.97 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.97 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.97 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.97 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.97 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.97 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.97 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.97 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.97 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.97 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.97 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.97 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.96 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.96 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.96 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.96 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.96 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.96 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.96 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.96 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.96 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.96 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.96 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.96 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.96 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.96 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.96 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.96 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.96 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.96 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.96 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.96 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.96 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.96 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.96 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.96 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.96 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.96 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.96 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.96 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.96 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.96 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.96 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.96 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.96 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.96 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.96 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.96 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.96 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.96 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.96 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.96 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.96 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.96 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.96 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.96 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.96 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.96 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.96 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.96 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.96 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.96 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.96 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.96 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.96 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.96 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.96 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.96 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.96 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.96 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.96 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.96 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.96 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.96 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.96 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.96 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.96 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.96 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.95 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.95 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.95 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.95 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.95 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.95 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.95 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.95 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.95 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.95 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.95 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.95 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.95 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.95 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.95 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.95 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.95 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.95 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.95 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.95 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.95 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.95 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.95 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.95 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.95 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.95 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.95 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.95 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.95 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.95 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.95 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.95 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.95 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.95 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.95 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.95 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.95 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.95 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.95 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.95 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.95 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.95 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.95 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.95 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.94 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.94 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.94 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.94 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.94 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.94 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.94 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.94 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.93 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.93 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.93 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.93 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.92 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.92 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.92 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.92 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.92 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.91 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.91 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.91 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.91 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.91 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.9 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.9 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.89 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.89 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.89 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.88 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.88 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.87 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.87 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.85 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.83 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.81 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.8 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.79 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.72 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.71 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.68 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.64 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.63 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.6 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.6 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.6 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.58 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.56 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.56 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.56 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.54 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.54 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.54 | |
| PTZ00421 | 493 | coronin; Provisional | 99.54 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.53 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.53 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.51 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.51 | |
| PTZ00420 | 568 | coronin; Provisional | 99.49 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.47 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.47 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.46 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.46 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.46 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.45 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.45 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.44 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.44 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.42 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.4 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.4 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.39 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.39 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.39 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.38 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.38 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.36 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.36 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.34 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.33 | |
| PTZ00420 | 568 | coronin; Provisional | 99.3 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.29 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.29 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.29 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.27 | |
| PTZ00421 | 493 | coronin; Provisional | 99.27 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.26 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 99.25 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.25 | |
| KOG0303 | 472 | consensus Actin-binding protein Coronin, contains | 99.24 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 99.23 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.23 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.23 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.21 | |
| KOG0302 | 440 | consensus Ribosome Assembly protein [General funct | 99.21 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.21 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.21 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.21 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.2 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.2 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.2 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.19 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.19 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.18 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.17 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.17 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.17 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.17 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.16 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.16 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.16 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.15 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.15 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.15 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.14 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.13 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.12 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.12 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.11 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.1 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.1 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.09 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.09 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.09 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.08 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 99.08 | |
| KOG1273 | 405 | consensus WD40 repeat protein [General function pr | 99.07 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.06 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.05 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.05 |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-70 Score=654.47 Aligned_cols=580 Identities=60% Similarity=0.930 Sum_probs=434.3
Q ss_pred cCCCcccccccccCCccc-ccccccCCCCCCcccccccccCCCCccchhhchhhhhhcccCCC-CCceeccccee----e
Q 004989 15 MEGSSDSAWQDSDSSRAL-NISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDH-LRNQGGLSGVC----E 88 (720)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~H-pnIV~l~~~~~----~ 88 (720)
|||++++ ++|++ |+++++.++++. .+.+.| +||+++++ .+ .
T Consensus 1 ~~~~~~~------~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~-~~~~~~~ 47 (793)
T PLN00181 1 MKGSSES------NSRGLNNTSGVSEFCTDG--------------------------SKSLSHIDYVRSLLG-SHKEGNL 47 (793)
T ss_pred CCCcccC------CCcCccCcccccccCCCc--------------------------cchhhHHHHHHHhhc-ccCCccc
Confidence 7888875 78999 899998888777 234556 68888888 34 2
Q ss_pred cCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcc
Q 004989 89 NEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 89 ~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
+......++.+|||.+++|.+||......+++.+++.|++||+.||+|||++|||||||||+||||+..|.+|++|||.+
T Consensus 48 ~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~ 127 (793)
T PLN00181 48 DGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 127 (793)
T ss_pred cccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeecccc
Confidence 22233357888999888999999766667999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccc
Q 004989 169 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 248 (720)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~ 248 (720)
.+.+.+. ...++++|||+++......... .
T Consensus 128 ~~~~~~~--------------------------~~~~ki~DfG~a~~~~~~~~~~-----------------------~- 157 (793)
T PLN00181 128 SDSGSDE--------------------------DATTKSREIGSSRREEILSERR-----------------------I- 157 (793)
T ss_pred Ccccccc--------------------------cCcccccccccccccccccccc-----------------------h-
Confidence 7654321 1135679999987432110000 0
Q ss_pred ccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccccCCCCchHHHHHHHhhcCCCCc
Q 004989 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPP 328 (720)
Q Consensus 249 d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~ 328 (720)
..........++......+||++|||||++.+..|+.++|||||||+||||++|+.+.......+..+....+|+
T Consensus 158 -----~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~ 232 (793)
T PLN00181 158 -----EKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPP 232 (793)
T ss_pred -----hhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcCh
Confidence 000011122233333446899999999999999999999999999999999998877665555566666666676
Q ss_pred cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 004989 329 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKL 408 (720)
Q Consensus 329 ~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e~~~~~~~~e~~~~~e~L~~fL~~l~~qK~e~~~~l 408 (720)
.....++...+++.+||+++|.+||++.|+|+||||......+.+++......+..++.+.+.+|+...+++++++..++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (793)
T PLN00181 233 QILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKL 312 (793)
T ss_pred hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667788889999999999999999999999999998766555555555555555666777888888889999999999
Q ss_pred HHHHHhhhcchHHHHHHHHHHHhcCCCCcccccccccCCCCCCCCccccCCCCCcccCcccccccccccccccccccccc
Q 004989 409 QDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLD 488 (720)
Q Consensus 409 q~el~~Le~Di~evE~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (720)
+.+++.|+.||+++++|+......+... ......++++..+......+.....
T Consensus 313 ~~~~~~l~~~i~~~~~r~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-- 365 (793)
T PLN00181 313 QDTISLLSSDIDQVVKRQLVLQQKGSDV-------------------------RSFLASRKRIRQGAETLAAEEENDD-- 365 (793)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccc-------------------------ccccccchhhhccccchhhcccccc--
Confidence 9999999999999998775543322111 1112223333333322211111110
Q ss_pred ccccCCCCCCccchhhhhhHHHHhHhHHHHHHHhhccCCCCC---CCCCccccccCCC-CCCCCCcccccccccccCCCc
Q 004989 489 DNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKP---SGRPLVRHSQLSS-DGRTSKPLVNERSSINNLGSK 564 (720)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~y~~~r~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 564 (720)
..+....+..+.+++++|||.||++||+|||++|++.... ..++..+.++... +++++ +.++.++.+..
T Consensus 366 --~~~~~~~~~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 438 (793)
T PLN00181 366 --NSSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSENGRSS-----EKSSMSNPAKP 438 (793)
T ss_pred --ccccccccccccchhhhHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccccc-----ccccccccccc
Confidence 0001223446677889999999999999999999865332 3444444444443 33332 33444444333
Q ss_pred cC-c-cCCCCCccccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc
Q 004989 565 EG-Y-SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE 642 (720)
Q Consensus 565 ~~-~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~ 642 (720)
+. | ....+++|+++|+++|+++++++++++.+.++.|++.+|.+.|++|+|+|||++|||||.|++|+|||+......
T Consensus 439 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~ 518 (793)
T PLN00181 439 PDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKD 518 (793)
T ss_pred ccccccccccccchhhhhhhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccc
Confidence 22 2 122366789999999999999999999999999999999999999999999999999999999999998765444
Q ss_pred ccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecC-CceEEEecCccc
Q 004989 643 NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNK-LLIIFRYGMFQE 714 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~-~~~~~~~~~~~~ 714 (720)
..+.|+|+..+.++++|.+++|+|+++++|||+++||+|+|||+.+++.+.+ |++++|++ .+..+++|+.|.
T Consensus 519 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg 598 (793)
T PLN00181 519 GRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 598 (793)
T ss_pred ccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCC
Confidence 4567788888888889999999998888999999999999999999988775 89999996 678999999986
Q ss_pred eE
Q 004989 715 VK 716 (720)
Q Consensus 715 ~~ 716 (720)
..
T Consensus 599 ~v 600 (793)
T PLN00181 599 SV 600 (793)
T ss_pred EE
Confidence 43
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=365.30 Aligned_cols=250 Identities=17% Similarity=0.172 Sum_probs=184.4
Q ss_pred cccccCCcccccccccC------CCCCC-cccccccccCCCC----ccchhhchhhhhhcccCCCCCceecccceeecCC
Q 004989 23 WQDSDSSRALNISGVSD------RNPRL-LRGERFGVRGDDS----NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA 91 (720)
Q Consensus 23 ~~~~~~~~~~~~~~~~~------~~~~~-~~~~r~~~~~~~~----~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~ 91 (720)
....-.++.+|.++++. ++.+. ++++-+.-+.... ....++-.+|..+|.+|+|||||++++ +|+...
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d-~f~~~d 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKD-FFEVPD 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEee-eeecCC
Confidence 34444566777776654 33443 3333332222222 223334468889999999999999999 777665
Q ss_pred CCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccC---CceEEeecCc
Q 004989 92 AIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF---NHVSFIESAS 167 (720)
Q Consensus 92 ~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~---~~vkliDfg~ 167 (720)
..|+|||| .||+|.+++-.++. +.+...+.+++||+.||.|||++||+||||||+|||+..+ ..+||.|||+
T Consensus 250 ---s~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 250 ---SSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred ---ceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccch
Confidence 45999999 99999999955544 8999999999999999999999999999999999999865 6678877776
Q ss_pred ccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccc
Q 004989 168 CSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI 247 (720)
Q Consensus 168 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~ 247 (720)
|+..|.. .|
T Consensus 326 AK~~g~~----------------------------------sf------------------------------------- 334 (475)
T KOG0615|consen 326 AKVSGEG----------------------------------SF------------------------------------- 334 (475)
T ss_pred hhccccc----------------------------------ee-------------------------------------
Confidence 6544321 00
Q ss_pred cccccchhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccchhhhchhhhccccCCCC---chHHHHHHHh
Q 004989 248 LDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTG---EEKTRTMSSL 321 (720)
Q Consensus 248 ~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~eLltpf~~~---~~~~~~~~~l 321 (720)
-...+|||.|.|||++.+.. +..++|||||||+||-+|++|.|+ .....+...+
T Consensus 335 --------------------m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI 394 (475)
T KOG0615|consen 335 --------------------MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI 394 (475)
T ss_pred --------------------hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH
Confidence 01268999999999998776 344889999999999999955444 3333345555
Q ss_pred hcCCCC--ccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 322 RHRVLP--PQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 322 ~~~~~p--~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
..+.++ |..+...+++ .+||.+||..||++|||+.|+|+||||+...
T Consensus 395 ~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 395 LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 554432 3334444444 4999999999999999999999999999764
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=336.61 Aligned_cols=208 Identities=22% Similarity=0.271 Sum_probs=174.2
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIv 143 (720)
+|..+|...+||+||++|++|+.... .++++||| +||+|.++++..++ ++|...-.|+.+|+.||.|||. ++||
T Consensus 126 rEl~il~~~~spyIV~~ygaF~~~~~---~isI~mEYMDgGSLd~~~k~~g~-i~E~~L~~ia~~VL~GL~YLh~~~~II 201 (364)
T KOG0581|consen 126 RELEILRSCQSPYIVGFYGAFYSNGE---EISICMEYMDGGSLDDILKRVGR-IPEPVLGKIARAVLRGLSYLHEERKII 201 (364)
T ss_pred HHHHHHhhCCCCCeeeEeEEEEeCCc---eEEeehhhcCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHhhccCee
Confidence 99999999999999999996665553 47999999 99999999965544 9999999999999999999995 9999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++..|.|||||||.+...... +
T Consensus 202 HRDIKPsNlLvNskGeVKicDFGVS~~lvnS-------------------------------------~----------- 233 (364)
T KOG0581|consen 202 HRDIKPSNLLVNSKGEVKICDFGVSGILVNS-------------------------------------I----------- 233 (364)
T ss_pred eccCCHHHeeeccCCCEEeccccccHHhhhh-------------------------------------h-----------
Confidence 9999999999999999999999987332000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||..|||||.+.+..|+.++||||||+.++|
T Consensus 234 --------------------------------------------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE 269 (364)
T KOG0581|consen 234 --------------------------------------------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLE 269 (364)
T ss_pred --------------------------------------------cccccccccccChhhhcCCcCCcccceecccHHHHH
Confidence 012589999999999999999999999999999999
Q ss_pred ccc---cCCCC----chHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 304 LFC---PFSTG----EEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~----~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||.+. ..+...+..|.....|......++ +..+|+..||++||.+||++.|+|+|||+++...
T Consensus 270 ~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 270 LAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 999 66653 456677777776544443333354 4569999999999999999999999999998643
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=344.39 Aligned_cols=240 Identities=20% Similarity=0.235 Sum_probs=185.6
Q ss_pred CcccccccccC------CCCCCccccccccc-CCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEe
Q 004989 29 SRALNISGVSD------RNPRLLRGERFGVR-GDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIE 101 (720)
Q Consensus 29 ~~~~~~~~~~~------~~~~~~~~~r~~~~-~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E 101 (720)
++-+|.+++.. .+.+..-+.+++-. --.....+-+-.+|+.|.++|+|||||++|+ +|++.. .+|+|+|
T Consensus 23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~-~FEDs~---nVYivLE 98 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYH-FFEDSN---NVYIVLE 98 (592)
T ss_pred eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeee-EeecCC---ceEEEEE
Confidence 56667777665 13444333333332 1112223334447888999999999999999 888886 5799999
Q ss_pred c-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccc
Q 004989 102 W-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 102 ~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~ 180 (720)
+ ..++|.++++ ...+++|.+++.+++||+.||.|||+++|||||||..||||+++.+|||.|||+|.....+
T Consensus 99 LC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~------ 171 (592)
T KOG0575|consen 99 LCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD------ 171 (592)
T ss_pred ecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc------
Confidence 9 8999999886 4456999999999999999999999999999999999999999999999888877432111
Q ss_pred ccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004989 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
+++
T Consensus 172 -----------------------------------------------------------------------------~Er 174 (592)
T KOG0575|consen 172 -----------------------------------------------------------------------------GER 174 (592)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 011
Q ss_pred cCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc
Q 004989 261 KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP 335 (720)
Q Consensus 261 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p 335 (720)
..+.+|||.|+|||++....+++.+||||+||+||.||+ ||.... ...++..|.... .|. ...+
T Consensus 175 -------k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-vkety~~Ik~~~Y~~P~---~ls~ 243 (592)
T KOG0575|consen 175 -------KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-VKETYNKIKLNEYSMPS---HLSA 243 (592)
T ss_pred -------cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-HHHHHHHHHhcCccccc---ccCH
Confidence 122689999999999999999999999999999999999 555533 335666666433 333 3345
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..++||.+||.+||.+|||+++||.|+||...
T Consensus 244 ~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 244 EAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 55699999999999999999999999999554
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=318.84 Aligned_cols=216 Identities=18% Similarity=0.261 Sum_probs=168.2
Q ss_pred Cccchhhch--hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Q 004989 57 SNDFELRKH--SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 57 ~~~~~~r~~--~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL 134 (720)
..+...++. ||+.+|.+++|||+|.+++ +|.... .+++|+||...++.+-|......++...++.|++|++.|+
T Consensus 39 edd~~VkKIAlREIrmLKqLkH~NLVnLiE-VFrrkr---klhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai 114 (396)
T KOG0593|consen 39 EDDPVVKKIALREIRMLKQLKHENLVNLIE-VFRRKR---KLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAI 114 (396)
T ss_pred CccHHHHHHHHHHHHHHHhcccchHHHHHH-HHHhcc---eeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHh
Confidence 344566665 8999999999999999999 444433 5799999988888888877777799999999999999999
Q ss_pred HHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|+|++++|||||||+||||+.+|.+||||||+|+....+ +|.
T Consensus 115 ~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p---------------------------------gd~---- 157 (396)
T KOG0593|consen 115 HFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP---------------------------------GDN---- 157 (396)
T ss_pred hhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC---------------------------------cch----
Confidence 9999999999999999999999999999998888553221 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCcccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sD 293 (720)
-+.++.|.||+|||.+.|. +|++++|
T Consensus 158 -----------------------------------------------------YTDYVATRWYRaPELLvGDtqYG~pVD 184 (396)
T KOG0593|consen 158 -----------------------------------------------------YTDYVATRWYRAPELLVGDTQYGKPVD 184 (396)
T ss_pred -----------------------------------------------------hhhhhhhhhccChhhhcccCcCCCccc
Confidence 0225789999999999995 5999999
Q ss_pred chhhhchhhhccc--cCCCC-chHHHHHHHhhc-CCC------------------------CccccccCch----HHHHH
Q 004989 294 IYRLGVLLFELFC--PFSTG-EEKTRTMSSLRH-RVL------------------------PPQLLLKFPK----EASFC 341 (720)
Q Consensus 294 IwSLGvll~eLlt--pf~~~-~~~~~~~~~l~~-~~~------------------------p~~~~~~~p~----~~~Li 341 (720)
|||+||++.||++ |+.+. .+....+..... +.+ +..+...+|. .++|+
T Consensus 185 iWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~ 264 (396)
T KOG0593|consen 185 IWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLL 264 (396)
T ss_pred chhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHH
Confidence 9999999999999 65444 333322222111 111 1112223332 34999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCC
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
..||+.||.+|++.+++|.||||..
T Consensus 265 k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 265 KKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred HHHhcCCccccccHHHHhcChHHHH
Confidence 9999999999999999999999943
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=317.28 Aligned_cols=197 Identities=18% Similarity=0.253 Sum_probs=161.9
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH---hCCCCCCCHHHHHHHHHHHHHHHHHHHH--
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL---DKPKRSVDVYECLHIFRQIVEIVYAAHS-- 139 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L---~~~~~~l~~~~~~~i~~QIl~aL~yLHs-- 139 (720)
.|+.+|++|+|||||++|+..+..+.. -++||||| .+|+|.+.| ++..+.+++..++.+|.|++.||.++|+
T Consensus 67 ~Ei~lLkQL~HpNIVqYy~~~f~~~~e--vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~ 144 (375)
T KOG0591|consen 67 KEISLLKQLNHPNIVQYYAHSFIEDNE--VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI 144 (375)
T ss_pred HHHHHHHhcCCchHHHHHHHhhhccch--hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc
Confidence 788899999999999999944433332 26899999 999999988 4456669999999999999999999999
Q ss_pred CC--ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 140 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 140 ~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.. |+||||||.||+|+.+|.|||.|||+++. ..
T Consensus 145 ~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~---------------------------------------------l~ 179 (375)
T KOG0591|consen 145 PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF---------------------------------------------LS 179 (375)
T ss_pred cccceeeccCcchheEEcCCCceeeccchhHhH---------------------------------------------hc
Confidence 45 99999999999999999999966665533 22
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
+.... ....+|||+||+||.+.+.+|+++||||||
T Consensus 180 s~~tf---------------------------------------------A~S~VGTPyYMSPE~i~~~~Y~~kSDiWsl 214 (375)
T KOG0591|consen 180 SKTTF---------------------------------------------AHSLVGTPYYMSPERIHESGYNFKSDIWSL 214 (375)
T ss_pred chhHH---------------------------------------------HHhhcCCCcccCHHHHhcCCCCcchhHHHH
Confidence 21111 123799999999999999999999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCCh
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta 355 (720)
||++|||+. ||.+. ........|.++.+||-+...++.. ..+|..|+.+||..||+.
T Consensus 215 GCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 215 GCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 999999998 89887 4556777888888877664545444 489999999999999986
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=345.43 Aligned_cols=237 Identities=20% Similarity=0.249 Sum_probs=191.9
Q ss_pred CCCCCCcccccccccC-CCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC
Q 004989 39 DRNPRLLRGERFGVRG-DDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR 116 (720)
Q Consensus 39 ~~~~~~~~~~r~~~~~-~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~ 116 (720)
+...+..++.+++... ..+..--.+.|+|++||.-+.||||+++|++ +++.. ++|+|.|| .||.|+++|..+++
T Consensus 33 h~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-we~~~---~lylvlEyv~gGELFdylv~kG~ 108 (786)
T KOG0588|consen 33 HAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-WENKQ---HLYLVLEYVPGGELFDYLVRKGP 108 (786)
T ss_pred cccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-eccCc---eEEEEEEecCCchhHHHHHhhCC
Confidence 3556677777776655 5555566689999999999999999999994 44443 68999999 99999999966554
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCch
Q 004989 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
+++.++.++|+||+.||.|||..+|+||||||+|+||+..+++||+|||+|..--.
T Consensus 109 -l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~----------------------- 164 (786)
T KOG0588|consen 109 -LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP----------------------- 164 (786)
T ss_pred -CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC-----------------------
Confidence 99999999999999999999999999999999999999999999998888732100
Q ss_pred hhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004989 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 ~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~ 276 (720)
.++.. ..||+|+
T Consensus 165 ------------------------------------------------gklLe--------------------TSCGSPH 176 (786)
T KOG0588|consen 165 ------------------------------------------------GKLLE--------------------TSCGSPH 176 (786)
T ss_pred ------------------------------------------------Ccccc--------------------ccCCCcc
Confidence 01111 1489999
Q ss_pred ccCcccccCCCC-Cccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCC
Q 004989 277 YASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 277 Y~APE~l~~~~~-s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
|.|||++.|.+| +.++||||.|||||.||+ ||+..+.. ..+..++++.+.-. ....++..+||.+||..||++|
T Consensus 177 YA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir-~LLlKV~~G~f~MP-s~Is~eaQdLLr~ml~VDp~~R 254 (786)
T KOG0588|consen 177 YAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR-VLLLKVQRGVFEMP-SNISSEAQDLLRRMLDVDPSTR 254 (786)
T ss_pred cCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH-HHHHHHHcCcccCC-CcCCHHHHHHHHHHhccCcccc
Confidence 999999999997 899999999999999999 89865554 56667777765322 2233455599999999999999
Q ss_pred CChHHHHcCcccCCCccchHH
Q 004989 353 PKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~l~e 373 (720)
.|++||+.|||+......-..
T Consensus 255 iT~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 255 ITTEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred ccHHHHhhCchhhcCCCCChh
Confidence 999999999999987554333
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=328.58 Aligned_cols=225 Identities=18% Similarity=0.269 Sum_probs=180.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.||.+++||.||+++. .|++.. .+|+|+|| .||.|+-.|.+.+. +++..++.|+..|+.||.|||++||||
T Consensus 74 ~Er~IL~~v~hPFiv~l~y-sFQt~~---kLylVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gIiy 148 (357)
T KOG0598|consen 74 AERNILSKIKHPFIVKLIY-SFQTEE---KLYLVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGIIY 148 (357)
T ss_pred HHHHHHHhCCCCcEeeeEE-ecccCC---eEEEEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCeee
Confidence 7788999999999999999 676765 67999999 99999999965554 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+..|+++|+|||+|+..-... +
T Consensus 149 RDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------------------------~--------------- 180 (357)
T KOG0598|consen 149 RDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------------------------D--------------- 180 (357)
T ss_pred ccCCHHHeeecCCCcEEEeccccchhcccCC---------------------------------C---------------
Confidence 9999999999999999999999884321110 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.....+||+.|||||++.+.+|+.++|+|||||++|||
T Consensus 181 ------------------------------------------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeM 218 (357)
T KOG0598|consen 181 ------------------------------------------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEM 218 (357)
T ss_pred ------------------------------------------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHH
Confidence 00115899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC----ChHHHHcCcccCCC-ccchHHHHH
Q 004989 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP-RDSMEEREA 376 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp----ta~eiL~hp~~~~~-~~~l~e~~~ 376 (720)
++ ||...+.. .++..+.+...+....-..+...+|+.++|..||.+|. .+.+|-+||||... ++.+..++.
T Consensus 219 L~G~pPF~~~~~~-~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l 297 (357)
T KOG0598|consen 219 LTGKPPFYAEDVK-KMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKL 297 (357)
T ss_pred hhCCCCCcCccHH-HHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCC
Confidence 99 66665544 55555554442222111335556999999999999995 78999999999987 556666666
Q ss_pred HHHHhhhhhh
Q 004989 377 AIELREQIDE 386 (720)
Q Consensus 377 ~~~~~e~~~~ 386 (720)
.+++.+....
T Consensus 298 ~PpF~P~~~~ 307 (357)
T KOG0598|consen 298 SPPFKPNVTG 307 (357)
T ss_pred CCCeecCCCC
Confidence 5565554444
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=333.49 Aligned_cols=208 Identities=21% Similarity=0.301 Sum_probs=166.8
Q ss_pred hhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
||+..|.+|+ |||||+|++++.+.+. .+|+||||+..+|.++++.+++.|++..++.|++||++||+|+|.+|+.|
T Consensus 57 REvksL~kln~hpniikL~Evi~d~~~---~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFH 133 (538)
T KOG0661|consen 57 REVKSLRKLNPHPNIIKLKEVIRDNDR---ILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFH 133 (538)
T ss_pred HHHHHHHhcCCCCcchhhHHHhhccCc---eEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 8888999999 9999999995555443 68999999999999999777888999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||+.....+||+|||+|+...+.
T Consensus 134 RDlKPENiLi~~~~~iKiaDFGLARev~Sk-------------------------------------------------- 163 (538)
T KOG0661|consen 134 RDLKPENILISGNDVIKIADFGLAREVRSK-------------------------------------------------- 163 (538)
T ss_pred ccCChhheEecccceeEecccccccccccC--------------------------------------------------
Confidence 999999999998899999888887543111
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
.| -+.++-|.||+|||+|.... |+.++||||+|||++|
T Consensus 164 ---------------------------------------pP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 164 ---------------------------------------PP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred ---------------------------------------CC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 00 12368899999999987666 8999999999999999
Q ss_pred ccc--c-CCCCchHHHHHHHhh---cC-----------------CCCc-------c-ccccCchHHHHHHHcCCCCCCCC
Q 004989 304 LFC--P-FSTGEEKTRTMSSLR---HR-----------------VLPP-------Q-LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt--p-f~~~~~~~~~~~~l~---~~-----------------~~p~-------~-~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
+.+ | |++..+..+.++... .. .+|. . ++...++.++||.+||.+||.+|
T Consensus 203 l~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 203 LYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 998 6 444444444333221 10 1111 1 12223344599999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004989 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
|||.|+|+||||+..
T Consensus 283 pTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 283 PTASQALQHPFFQVG 297 (538)
T ss_pred ccHHHHhcCcccccc
Confidence 999999999999976
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=332.52 Aligned_cols=216 Identities=18% Similarity=0.268 Sum_probs=172.3
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|...|.+| .||.||+||. -|+|+. .+|+|+|| .+|+|.++|++.+. |++..++.|+.||++||+|||++|||
T Consensus 122 ~Ek~~l~~L~~hPgivkLy~-TFQD~~---sLYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH~~GII 196 (604)
T KOG0592|consen 122 REKEALTQLSGHPGIVKLYF-TFQDEE---SLYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLHSNGII 196 (604)
T ss_pred HHHHHHHHhhCCCCeEEEEE-Eeeccc---ceEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHHhcCce
Confidence 667778888 8999999999 677765 46999999 99999999977654 99999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||||+.+++++|.|||.|+.++....... ++.
T Consensus 197 HRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~-------------------------------~~~---------- 235 (604)
T KOG0592|consen 197 HRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE-------------------------------NPV---------- 235 (604)
T ss_pred eccCChhheeEcCCCcEEEeeccccccCChhhcccc-------------------------------Ccc----------
Confidence 999999999999999999999999976533211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. ... .. .....+||..|.+||+|.....++++|||+||||||.
T Consensus 236 --------~~------------~~a---------~s-------~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQ 279 (604)
T KOG0592|consen 236 --------DP------------NQA---------SS-------RRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQ 279 (604)
T ss_pred --------Cc------------ccc---------cC-------cccceeeeecccCHHHhcCCCCCcccchHHHHHHHHH
Confidence 00 000 00 0123799999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+. ||...++. .+++.|.+ -.+|+.++ +...+|+.++|..||.+|+|+.+|.+||||...
T Consensus 280 mlaG~PPFra~Ney-liFqkI~~l~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 280 MLAGQPPFRAANEY-LIFQKIQALDYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred HhcCCCCCccccHH-HHHHHHHHhcccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 999 77776665 34444443 23444432 344499999999999999999999999999998
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=322.06 Aligned_cols=216 Identities=21% Similarity=0.252 Sum_probs=167.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.++|..+|++++|||||+++| ....... ..+++.||| .||+|.+++.+.+..+++..++.+.+||++||.|||++||
T Consensus 61 l~~Ei~iL~~l~~p~IV~~~G-~~~~~~~-~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~ 138 (313)
T KOG0198|consen 61 LEREIRILSRLNHPNIVQYYG-SSSSREN-DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGI 138 (313)
T ss_pred HHHHHHHHHhCCCCCEEeeCC-ccccccC-eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 358889999999999999999 3222221 368999999 9999999997665479999999999999999999999999
Q ss_pred eeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 143 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 vHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|||||||+|||++. ++.+||+|||++........
T Consensus 139 vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~--------------------------------------------- 173 (313)
T KOG0198|consen 139 VHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT--------------------------------------------- 173 (313)
T ss_pred eccCcccceEEEeCCCCeEEeccCccccccccccc---------------------------------------------
Confidence 99999999999999 79999999998744321000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
.+.......||+.|||||++.+.. ..+++|||||||+
T Consensus 174 ------------------------------------------~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCt 211 (313)
T KOG0198|consen 174 ------------------------------------------KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCT 211 (313)
T ss_pred ------------------------------------------cccccccccCCccccCchhhcCCCcCCccchhhhcCCE
Confidence 000011257999999999998632 4469999999999
Q ss_pred hhhccc---cCCC-CchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 301 LFELFC---PFST-GEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~-~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+.||+| ||.. ................| .++...+.. .+|+.+||..||++||||.++|+|||+.....
T Consensus 212 VvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P-~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 212 VVEMLTGKPPWSEFFEEAEALLLIGREDSLP-EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred EEeccCCCCcchhhcchHHHHHHHhccCCCC-CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 999999 4544 22233344444444444 444445544 49999999999999999999999999987643
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=331.57 Aligned_cols=204 Identities=25% Similarity=0.376 Sum_probs=169.0
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..||..++..++ ||||+++++ ++.... .+|+|||| .||+|.+++.+ ..++.+.+++.+|+||+.||+|||++|
T Consensus 66 i~rEi~~~~~~~~HpnI~~l~e-v~~t~~---~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~g 140 (370)
T KOG0583|consen 66 IKREISILRRLRSHPNIIRLLE-VFATPT---KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRG 140 (370)
T ss_pred hHHHHHHHHHhccCCCEeEEEE-EEecCC---eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence 337889999999 999999999 666665 48999999 88999999976 445999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC-CceEEeecCcccCCC-CCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 142 IVVHNVRPSCFVMSSF-NHVSFIESASCSDSG-SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 142 IvHrDLKP~NILl~~~-~~vkliDfg~a~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|+||||||+|||++.+ +++||+|||++.... .+ ++
T Consensus 141 i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------------------------~~--------- 177 (370)
T KOG0583|consen 141 IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------------------------GL--------- 177 (370)
T ss_pred EeeCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------------------------Cc---------
Confidence 9999999999999998 999999999884331 11 00
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-C-Cccccchhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-V-SCASDIYRL 297 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~-s~~sDIwSL 297 (720)
....+||+.|+|||++.+.. | +.++||||+
T Consensus 178 ------------------------------------------------l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~ 209 (370)
T KOG0583|consen 178 ------------------------------------------------LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSL 209 (370)
T ss_pred ------------------------------------------------ccCCCCCcccCCHHHhCCCCCcCCchhhhhhh
Confidence 01158999999999999987 7 589999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||+||.|++ ||...... .+...+..+. +|..+. .++..+|+.+||.+||.+|+|+.+|+.||||+.
T Consensus 210 GViLy~ml~G~~PF~d~~~~-~l~~ki~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 210 GVILYVLLCGRLPFDDSNVP-NLYRKIRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHHHhCCCCCCCccHH-HHHHHHhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 999999999 67664443 3444455443 333333 667779999999999999999999999999997
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=317.01 Aligned_cols=245 Identities=17% Similarity=0.197 Sum_probs=180.9
Q ss_pred CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceee-cCCCCCcEEEEEecCCCCHHHHHhCCCCCC
Q 004989 40 RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 118 (720)
Q Consensus 40 ~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~-~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l 118 (720)
.+...++++++. .--...-..-|..||..+|.+++|+||+.+++++.. ......-+|+|+|+++.+|.+.|+.. ..+
T Consensus 45 ~t~~~VAIKKi~-~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~-~~L 122 (359)
T KOG0660|consen 45 RTGEKVAIKKIL-NPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQ-QDL 122 (359)
T ss_pred CCCCEeehhhhh-hhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcC-ccc
Confidence 444555555544 111223344477799999999999999999994443 23345569999999999999999554 449
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++..+..+++||+.||.|+|+.||+||||||+|+|++.+..+|++|||+|+...... .
T Consensus 123 ~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~-~--------------------- 180 (359)
T KOG0660|consen 123 TDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF-E--------------------- 180 (359)
T ss_pred cHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccC-c---------------------
Confidence 999999999999999999999999999999999999999999998888885432110 0
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.+| -+.++.|.||+
T Consensus 181 ---------~~~---------------------------------------------------------mTeYVaTRWYR 194 (359)
T KOG0660|consen 181 ---------DGF---------------------------------------------------------MTEYVATRWYR 194 (359)
T ss_pred ---------ccc---------------------------------------------------------hhcceeeeeec
Confidence 000 12368899999
Q ss_pred CcccccCC-CCCccccchhhhchhhhccc--cCCCCchHHHHHH------------------------Hhhc-CCCC---
Q 004989 279 SPEELAGA-PVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMS------------------------SLRH-RVLP--- 327 (720)
Q Consensus 279 APE~l~~~-~~s~~sDIwSLGvll~eLlt--pf~~~~~~~~~~~------------------------~l~~-~~~p--- 327 (720)
|||++... .|+.+.||||+||||.||++ |..+.......+. .+.. ...|
T Consensus 195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~ 274 (359)
T KOG0660|consen 195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP 274 (359)
T ss_pred CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC
Confidence 99998654 49999999999999999999 4332221111111 1111 1111
Q ss_pred --ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHHH
Q 004989 328 --PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374 (720)
Q Consensus 328 --~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e~ 374 (720)
..++...|...+|+.+||..||.+|+|++|+|+|||+....++-.|.
T Consensus 275 f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 275 FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 12334556667999999999999999999999999999998876664
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=320.70 Aligned_cols=234 Identities=18% Similarity=0.203 Sum_probs=175.9
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHH
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 121 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~ 121 (720)
-+.++-+|+.+...... +.+=..||+.||.+|+|||||+|.+.+.... ...+|+|+||+..+|.-++..++-.|++.
T Consensus 142 gkivALKKvr~d~~~~~-~~~t~~REI~ILr~l~HpNIikL~eivt~~~--~~siYlVFeYMdhDL~GLl~~p~vkft~~ 218 (560)
T KOG0600|consen 142 GKIVALKKVRFDNEKEG-FPITAIREIKILRRLDHPNIIKLEEIVTSKL--SGSIYLVFEYMDHDLSGLLSSPGVKFTEP 218 (560)
T ss_pred CcEEEEEEeecccCCCc-chHHHHHHHHHHHhcCCCcccceeeEEEecC--CceEEEEEecccchhhhhhcCCCcccChH
Confidence 34456666666554322 2222348899999999999999999666551 22589999999999999998877789999
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.|++||+.||+|||++||+|||||.+||||+.+|.+||+|||+|+.+.....
T Consensus 219 qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~------------------------- 273 (560)
T KOG0600|consen 219 QIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS------------------------- 273 (560)
T ss_pred HHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCC-------------------------
Confidence 9999999999999999999999999999999999999999988887754322100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.+ -+..+-|.||+|||
T Consensus 274 --------------------------------------------------------------~~--~T~rVvTLWYRpPE 289 (560)
T KOG0600|consen 274 --------------------------------------------------------------AP--YTSRVVTLWYRPPE 289 (560)
T ss_pred --------------------------------------------------------------cc--cccceEEeeccChH
Confidence 00 12257799999999
Q ss_pred cccCCC-CCccccchhhhchhhhccc--c-CCCCchHHHHHHHhhc-CCCCcccc-------------------------
Q 004989 282 ELAGAP-VSCASDIYRLGVLLFELFC--P-FSTGEEKTRTMSSLRH-RVLPPQLL------------------------- 331 (720)
Q Consensus 282 ~l~~~~-~s~~sDIwSLGvll~eLlt--p-f~~~~~~~~~~~~l~~-~~~p~~~~------------------------- 331 (720)
+|.|.. |++++|+||+||||.||+. | |.+..+..+......- +.+.+..+
T Consensus 290 LLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~ 369 (560)
T KOG0600|consen 290 LLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETF 369 (560)
T ss_pred HhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHh
Confidence 999987 9999999999999999999 4 4444444333222221 11111100
Q ss_pred -ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 332 -LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 -~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+...+|+..||..||.+|.||.++|+|+||...
T Consensus 370 ~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 370 KDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred ccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 011223499999999999999999999999999554
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=325.03 Aligned_cols=228 Identities=18% Similarity=0.254 Sum_probs=181.0
Q ss_pred CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCC
Q 004989 40 RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV 118 (720)
Q Consensus 40 ~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l 118 (720)
.+...++++|+.+++.....-.| .|..+|...+|+|||.+++.+... ..+|+|||| .||+|.+.+.... +
T Consensus 296 ~~~~~VaiK~m~l~~Q~~keLil---nEi~Vm~~~~H~NiVnfl~Sylv~----deLWVVMEym~ggsLTDvVt~~~--~ 366 (550)
T KOG0578|consen 296 STKQEVAIKRMDLRKQPKKELLL---NEILVMRDLHHPNIVNFLDSYLVG----DELWVVMEYMEGGSLTDVVTKTR--M 366 (550)
T ss_pred cCCceEEEEEEEeccCCchhhhH---HHHHHHHhccchHHHHHHHHhccc----ceeEEEEeecCCCchhhhhhccc--c
Confidence 34555677777776654332222 678899999999999999954444 257999999 9999999885443 9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
+|.++..|+++++.||+|||.+||||||||.+|||+..+|.+||+|||+|..+....
T Consensus 367 ~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~----------------------- 423 (550)
T KOG0578|consen 367 TEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ----------------------- 423 (550)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccccc-----------------------
Confidence 999999999999999999999999999999999999999999999999994431110
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.+....+|||+||
T Consensus 424 -------------------------------------------------------------------~KR~TmVGTPYWM 436 (550)
T KOG0578|consen 424 -------------------------------------------------------------------SKRSTMVGTPYWM 436 (550)
T ss_pred -------------------------------------------------------------------CccccccCCCCcc
Confidence 0112369999999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhh-cCCCCcccccc-CchHHHHHHHcCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~-~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp 353 (720)
|||++....|++++||||||+++.||+- ||....+. .++..|. ++.+.-..+.. .+...+|+.+||..||.+|+
T Consensus 437 APEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl-rAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ra 515 (550)
T KOG0578|consen 437 APEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-RALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRA 515 (550)
T ss_pred chhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH-HHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCC
Confidence 9999999999999999999999999998 77775555 4444444 34333333333 34556999999999999999
Q ss_pred ChHHHHcCcccCCC
Q 004989 354 KMGELLQSEFLNEP 367 (720)
Q Consensus 354 ta~eiL~hp~~~~~ 367 (720)
+|.|+|+||||+..
T Consensus 516 sA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 516 SAKELLEHPFLKMA 529 (550)
T ss_pred CHHHHhcChhhhhc
Confidence 99999999999554
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=325.75 Aligned_cols=278 Identities=15% Similarity=0.175 Sum_probs=184.9
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.++|.|| .+|...++|+||+||. .|++.. ++|||||| +||++..+|.+.+ .|++..++.|+.+++.|++.||
T Consensus 186 ~hV~aER--diL~~~ds~~vVKLyY-sFQD~~---~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH 258 (550)
T KOG0605|consen 186 EHVRAER--DILAEVDSPWVVKLYY-SFQDKE---YLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIH 258 (550)
T ss_pred HHHHHHH--HHhhhcCCCcEEEEEE-EecCCC---eeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHH
Confidence 3445544 4788899999999999 777776 67999999 9999999996554 4999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhh--hcccccccccccCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR--TRLRREDLQLVTAP 216 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~l~Dfgla~~~ 216 (720)
+.|+|||||||+|+||+..|++||.|||+|.........+... .++.... ......||.-...
T Consensus 259 ~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~- 323 (550)
T KOG0605|consen 259 QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYR--------------LDEQMQINLSEAKPSDFPKFNT- 323 (550)
T ss_pred HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhc--------------chhhhhhhhccCCCcccccccc-
Confidence 9999999999999999999999999999995432221110000 0000000 0000011100000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchh
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.... . -....-+........-.-..+|||.|||||++.+..|+..+|+||
T Consensus 324 -----~~~~----------------------~---~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 324 -----PRST----------------------M---SRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred -----ccch----------------------h---hHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0000 0 000000111111111122369999999999999999999999999
Q ss_pred hhchhhhccccCCCC--chHHHHHHHhhcCC----CCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004989 297 LGVLLFELFCPFSTG--EEKTRTMSSLRHRV----LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvll~eLltpf~~~--~~~~~~~~~l~~~~----~p~~~~~~~p~~~~Li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
||||+||||.||+++ +....++..|.++. +|.. ....++..|||.+||. ||.+|. .+.||.+||||+..
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV 451 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence 999999999955443 33345555555432 3332 2333555699999999 999996 69999999999988
Q ss_pred -ccchHHHHHHHHHhhhhhhHHHHHHH
Q 004989 368 -RDSMEEREAAIELREQIDEEELLLEF 393 (720)
Q Consensus 368 -~~~l~e~~~~~~~~e~~~~~e~L~~f 393 (720)
++.+-+.. .++.++..+......|
T Consensus 452 ~W~~l~~~~--apfvP~v~~~~DT~yF 476 (550)
T KOG0605|consen 452 DWDHLREMP--APFVPQVNSELDTQYF 476 (550)
T ss_pred CcchhhcCC--CCCCCCCCCccccccc
Confidence 55544433 4455545443333333
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=290.60 Aligned_cols=208 Identities=20% Similarity=0.249 Sum_probs=166.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..++|+.|-..|.|||||++.+.+-+. ...|+|+|+ .|++|..-|-+. -.+++..+.++++||+++|+|+|.+|
T Consensus 56 ~l~rEarIC~~LqHP~IvrL~~ti~~~----~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~ 130 (355)
T KOG0033|consen 56 KLEREARICRKLQHPNIVRLHDSIQEE----SFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNG 130 (355)
T ss_pred HHHHHHHHHHhcCCCcEeehhhhhccc----ceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 445888899999999999999933333 267999999 999998777333 23799999999999999999999999
Q ss_pred ceeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|||||+||+|+|+-+ ..-+||+|||++.+.+..
T Consensus 131 IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g-------------------------------------------- 166 (355)
T KOG0033|consen 131 IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG-------------------------------------------- 166 (355)
T ss_pred ceeccCChhheeeeeccCCCceeecccceEEEeCCc--------------------------------------------
Confidence 999999999999963 345899888888554311
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
... .| .+|||.|||||++...+|+..+|||+.|
T Consensus 167 ----------~~~------------------~G-------------------~~GtP~fmaPEvvrkdpy~kpvDiW~cG 199 (355)
T KOG0033|consen 167 ----------EAW------------------HG-------------------FAGTPGYLSPEVLKKDPYSKPVDIWACG 199 (355)
T ss_pred ----------ccc------------------cc-------------------ccCCCcccCHHHhhcCCCCCcchhhhhh
Confidence 000 11 5899999999999999999999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCC--CC-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||-||. ||.+... ...+..|..+. +| |.+....|...+|+.+||..||.+|.|+.|+|+|||+.+.
T Consensus 200 ViLfiLL~G~~PF~~~~~-~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 200 VILYILLVGYPPFWDEDQ-HRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred HHHHHHHhCCCCCCCccH-HHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 99999999 5555333 36666666543 33 3555556666799999999999999999999999999985
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=301.09 Aligned_cols=214 Identities=15% Similarity=0.220 Sum_probs=175.7
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|..+.||.++++++ .+.+.. .+|+|||| +||.|..+|++.++ +++..++.|+.||+.||+|||+.+|++
T Consensus 93 nEk~vL~~v~~PFlv~l~~-t~~d~~---~lymvmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~~iiY 167 (355)
T KOG0616|consen 93 NEKRVLKAVSHPFLVKLYG-TFKDNS---NLYMVMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSLDIIY 167 (355)
T ss_pred hHHHHHhhccCceeEEEEE-eeccCC---eEEEEEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhcCeee
Confidence 6778999999999999999 454443 68999999 99999999977655 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||+|||+|+....
T Consensus 168 RDLKPENiLlD~~G~iKitDFGFAK~v~~--------------------------------------------------- 196 (355)
T KOG0616|consen 168 RDLKPENLLLDQNGHIKITDFGFAKRVSG--------------------------------------------------- 196 (355)
T ss_pred ccCChHHeeeccCCcEEEEeccceEEecC---------------------------------------------------
Confidence 99999999999999999999888733100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
..-..+|||.|+|||++...+|..++|.|||||++|||
T Consensus 197 ------------------------------------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEM 234 (355)
T KOG0616|consen 197 ------------------------------------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEM 234 (355)
T ss_pred ------------------------------------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHH
Confidence 00126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCC--CCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHH
Q 004989 305 FC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e 373 (720)
+. ||...++ ..++..|..+. +|+.+ .+...+|+..+|+.|-.+|. ...+|..||||+.. +..+..
T Consensus 235 laG~pPF~~~~~-~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~ 310 (355)
T KOG0616|consen 235 LAGYPPFYDDNP-IQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQ 310 (355)
T ss_pred HcCCCCCcCCCh-HHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhh
Confidence 99 5665555 46666666543 44443 35667999999999999993 57899999999987 455555
Q ss_pred HHHHHHHh
Q 004989 374 REAAIELR 381 (720)
Q Consensus 374 ~~~~~~~~ 381 (720)
+....++.
T Consensus 311 r~ie~P~~ 318 (355)
T KOG0616|consen 311 RKIEPPFE 318 (355)
T ss_pred ccccCCCC
Confidence 54444443
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=308.81 Aligned_cols=227 Identities=19% Similarity=0.267 Sum_probs=183.1
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCH
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDV 120 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~ 120 (720)
-|.++++-|.-..-.+.....+..||+.|++.|+||||+.+|. +|+..+ .+.||||| .+|.|.+|+...+ .+++
T Consensus 78 gR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyE-VFENkd---KIvivMEYaS~GeLYDYiSer~-~LsE 152 (668)
T KOG0611|consen 78 GREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYE-VFENKD---KIVIVMEYASGGELYDYISERG-SLSE 152 (668)
T ss_pred CcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhh-hhcCCc---eEEEEEEecCCccHHHHHHHhc-cccH
Confidence 3445555454444455566667778999999999999999999 666665 56999999 9999999995544 4999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhh
Q 004989 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
.+++++|+||+.||.|||.++|+|||||.+|||++.++++||+|||++-.+...
T Consensus 153 rEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~-------------------------- 206 (668)
T KOG0611|consen 153 REARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK-------------------------- 206 (668)
T ss_pred HHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc--------------------------
Confidence 999999999999999999999999999999999999999999988887322111
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCc
Q 004989 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.| ...++|+|-|.+|
T Consensus 207 --------kf---------------------------------------------------------LqTFCGSPLYASP 221 (668)
T KOG0611|consen 207 --------KF---------------------------------------------------------LQTFCGSPLYASP 221 (668)
T ss_pred --------cH---------------------------------------------------------HHHhcCCcccCCc
Confidence 01 0125899999999
Q ss_pred ccccCCCC-Cccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChH
Q 004989 281 EELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 356 (720)
Q Consensus 281 E~l~~~~~-s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~ 356 (720)
|+++|.+| ++.+|-|||||+||.|+. ||++.+.. .+...|..+.+.... .-++...||+|||..||.+|.|+.
T Consensus 222 EIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-~lvrQIs~GaYrEP~--~PSdA~gLIRwmLmVNP~RRATie 298 (668)
T KOG0611|consen 222 EIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-RLVRQISRGAYREPE--TPSDASGLIRWMLMVNPERRATIE 298 (668)
T ss_pred cccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH-HHHHHhhcccccCCC--CCchHHHHHHHHHhcCcccchhHH
Confidence 99999997 799999999999999998 89887665 555666665543221 224556999999999999999999
Q ss_pred HHHcCcccCCC
Q 004989 357 ELLQSEFLNEP 367 (720)
Q Consensus 357 eiL~hp~~~~~ 367 (720)
+|..|=|++-.
T Consensus 299 DiAsHWWvNwg 309 (668)
T KOG0611|consen 299 DIASHWWVNWG 309 (668)
T ss_pred HHhhhheeecc
Confidence 99999888743
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=309.43 Aligned_cols=213 Identities=16% Similarity=0.254 Sum_probs=164.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+.|..+|+.++|||||++++ ++++++ .+|+|||| .||+|.+||++.++ +++..++.++.||+.||++||+++||
T Consensus 57 ~~Ei~iLkel~H~nIV~l~d-~~~~~~---~i~lVMEyC~gGDLs~yi~~~~~-l~e~t~r~Fm~QLA~alq~L~~~~Ii 131 (429)
T KOG0595|consen 57 LSEIKILKELKHPNIVRLLD-CIEDDD---FIYLVMEYCNGGDLSDYIRRRGR-LPEATARHFMQQLASALQFLHENNII 131 (429)
T ss_pred HHHHHHHHhcCCcceeeEEE-EEecCC---eEEEEEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 58899999999999999999 666665 68999999 89999999976654 99999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||.||||+........ ..+|++|||+|+......
T Consensus 132 HRDLKPQNiLLs~~~~~~~~---------------------------------------~~LKIADFGfAR~L~~~~--- 169 (429)
T KOG0595|consen 132 HRDLKPQNILLSTTARNDTS---------------------------------------PVLKIADFGFARFLQPGS--- 169 (429)
T ss_pred eccCCcceEEeccCCCCCCC---------------------------------------ceEEecccchhhhCCchh---
Confidence 99999999999864110000 123445565555433110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
-....+|+|.|||||++....|+.++|+||+|+|||+
T Consensus 170 -------------------------------------------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq 206 (429)
T KOG0595|consen 170 -------------------------------------------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQ 206 (429)
T ss_pred -------------------------------------------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHH
Confidence 0012689999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-CCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH-RVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~-~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||...... +....+.. ....+.+.. ..+...+|+..+|..+|.+|.+..+.+.|+++....
T Consensus 207 ~l~g~~Pf~a~t~~-eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 207 CLTGKPPFDAETPK-ELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred HHhCCCCccccCHH-HHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 999 55554443 34444443 223333333 334445999999999999999999999999988763
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=300.97 Aligned_cols=235 Identities=17% Similarity=0.222 Sum_probs=181.3
Q ss_pred CCCCCcccccccccCCCCccchh--hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCC
Q 004989 40 RNPRLLRGERFGVRGDDSNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS 117 (720)
Q Consensus 40 ~~~~~~~~~r~~~~~~~~~~~~~--r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~ 117 (720)
++.+-++-+|+....+ ...| -.-||+.+|.+++|||||.+-.++.. .+...+|+||||...+|..+|..-..+
T Consensus 99 ~t~eIVALKr~kmeke---k~GFPItsLREIniLl~~~H~NIV~vkEVVvG--~~~d~iy~VMe~~EhDLksl~d~m~q~ 173 (419)
T KOG0663|consen 99 KTDEIVALKRLKMEKE---KEGFPITSLREINILLKARHPNIVEVKEVVVG--SNMDKIYIVMEYVEHDLKSLMETMKQP 173 (419)
T ss_pred CcceeEEeeecccccc---cCCCcchhHHHHHHHHhcCCCCeeeeEEEEec--cccceeeeeHHHHHhhHHHHHHhccCC
Confidence 4555566666666553 2333 33488999999999999999995543 334469999999989999999777778
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchh
Q 004989 118 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197 (720)
Q Consensus 118 l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (720)
+...+++.++.|++.||.|||.+.|+||||||+|+|++..|.+|++|||+|+.+|.+..
T Consensus 174 F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k--------------------- 232 (419)
T KOG0663|consen 174 FLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK--------------------- 232 (419)
T ss_pred CchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcc---------------------
Confidence 99999999999999999999999999999999999999999999999999987766510
Q ss_pred hhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcc
Q 004989 198 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277 (720)
Q Consensus 198 ~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y 277 (720)
.-+..+-|.||
T Consensus 233 ---------------------------------------------------------------------~~T~lVVTLWY 243 (419)
T KOG0663|consen 233 ---------------------------------------------------------------------PYTPLVVTLWY 243 (419)
T ss_pred ---------------------------------------------------------------------cCcceEEEeee
Confidence 01225779999
Q ss_pred cCcccccCCC-CCccccchhhhchhhhccc--cC-CCCchHHHHHHHhhc------CCCC--------------cc----
Q 004989 278 ASPEELAGAP-VSCASDIYRLGVLLFELFC--PF-STGEEKTRTMSSLRH------RVLP--------------PQ---- 329 (720)
Q Consensus 278 ~APE~l~~~~-~s~~sDIwSLGvll~eLlt--pf-~~~~~~~~~~~~l~~------~~~p--------------~~---- 329 (720)
+|||++.+.. |++++|+||+|||+.||++ |. ++..+..+....+.- .+.| ..
T Consensus 244 RaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~ 323 (419)
T KOG0663|consen 244 RAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNN 323 (419)
T ss_pred cCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchh
Confidence 9999999988 9999999999999999999 54 444443333332221 1111 00
Q ss_pred ----cccc-C-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 330 ----LLLK-F-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 330 ----~~~~-~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+... . ....+|+..+|.+||.+|.||.|.|+|+||.+...
T Consensus 324 lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 324 LRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred hhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 1001 1 12248999999999999999999999999998643
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=304.14 Aligned_cols=272 Identities=15% Similarity=0.160 Sum_probs=185.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
|...|..||+.++||.++.||. .++.+. ..|++||| .||+|..++ +++++.+++..++.|+..|+.||+|||-.
T Consensus 123 Ra~tE~eIL~~lDHPFlPTLYa-~fet~~---~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml 198 (459)
T KOG0610|consen 123 RAQTEREILSLLDHPFLPTLYA-SFETDK---YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML 198 (459)
T ss_pred HHHHHHHHHHhcCCCccchhhh-eeeccc---eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh
Confidence 6678999999999999999999 666554 67999999 999999988 56677799999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCC-CCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||.|||||+||||.++|+|.|+||.++..... +.+- ...+..+.............-|.+.......
T Consensus 199 GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~-----------~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~ 267 (459)
T KOG0610|consen 199 GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV-----------KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSK 267 (459)
T ss_pred ceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee-----------ccCCCCCCCCCcccccccccccccchhcccc
Confidence 999999999999999999999999999854311 1000 0000000000000000000111100000000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
... . ...... +...+... .....+....+||-.|+|||++.|...+.++|+|+|||
T Consensus 268 ~~~------------------k--~~~~~~-~~~p~~~a---ep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGI 323 (459)
T KOG0610|consen 268 KRK------------------K--KDESAS-RSLPELVA---EPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGI 323 (459)
T ss_pred ccc------------------c--cccccc-ccchhhhc---CCCCccccccccccccccceeeecCCCCchhhHHHHHH
Confidence 000 0 000000 00001100 11112334589999999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC----hHHHHcCcccCCCccchH
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRDSME 372 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt----a~eiL~hp~~~~~~~~l~ 372 (720)
+|||||. ||.+.+........+.+...-|..+.......|||+++|.+||++|.. |.||.+||||++..-.+.
T Consensus 324 flYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 324 FLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred HHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence 9999998 898887775555555443322332233345569999999999999987 999999999999865544
Q ss_pred H
Q 004989 373 E 373 (720)
Q Consensus 373 e 373 (720)
.
T Consensus 404 r 404 (459)
T KOG0610|consen 404 R 404 (459)
T ss_pred e
Confidence 3
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=291.76 Aligned_cols=235 Identities=14% Similarity=0.196 Sum_probs=182.5
Q ss_pred CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCC
Q 004989 40 RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 119 (720)
Q Consensus 40 ~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~ 119 (720)
.+.+.+++++|... .....-.+-..||+..|..++||||+.+.+ +|.... .+-+|+||...+|...|+.....++
T Consensus 25 ~t~~~VAIKKIkl~-~~kdGi~~talREIK~Lqel~h~nIi~LiD-~F~~~~---~l~lVfEfm~tdLe~vIkd~~i~l~ 99 (318)
T KOG0659|consen 25 ETGKRVAIKKIKLG-NAKDGINRTALREIKLLQELKHPNIIELID-VFPHKS---NLSLVFEFMPTDLEVVIKDKNIILS 99 (318)
T ss_pred CCCcEEEEEEeecc-ccccCccHHHHHHHHHHHHccCcchhhhhh-hccCCC---ceEEEEEeccccHHHHhcccccccC
Confidence 34455677776664 333333344458888999999999999999 444333 4689999999999999988888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhh
Q 004989 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
..+++.|+.+++.||+|||++.|+||||||.|+||+++|.+|++|||+++.+|.+...
T Consensus 100 pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~---------------------- 157 (318)
T KOG0659|consen 100 PADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI---------------------- 157 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc----------------------
Confidence 9999999999999999999999999999999999999999999999999777655210
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004989 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
.+..+-|.||+|
T Consensus 158 --------------------------------------------------------------------~~~~V~TRWYRA 169 (318)
T KOG0659|consen 158 --------------------------------------------------------------------QTHQVVTRWYRA 169 (318)
T ss_pred --------------------------------------------------------------------cccceeeeeccC
Confidence 011356999999
Q ss_pred cccccCCC-CCccccchhhhchhhhccc--cCCCCchHHHHHHHhhc--CC--------------------CCcc-----
Q 004989 280 PEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRH--RV--------------------LPPQ----- 329 (720)
Q Consensus 280 PE~l~~~~-~s~~sDIwSLGvll~eLlt--pf~~~~~~~~~~~~l~~--~~--------------------~p~~----- 329 (720)
||++.|.. |+..+||||.|||+.||+- ||.+.+...+.+..+-. +. +|..
T Consensus 170 PELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~l 249 (318)
T KOG0659|consen 170 PELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNL 249 (318)
T ss_pred hHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccc
Confidence 99999987 9999999999999999998 87766444333332211 00 1111
Q ss_pred ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 330 ~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+....++..+|+..||.+||.+|+|+.|+|+|+||+....
T Consensus 250 f~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 250 FPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred cccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 1122234459999999999999999999999999997533
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=310.91 Aligned_cols=207 Identities=19% Similarity=0.229 Sum_probs=165.7
Q ss_pred hhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.....+|..+|++++|||||+++| ++..... .+++|||| .+|+|.++|.+ ..+.++...+..|+.||+.|+.|||
T Consensus 83 ~~~f~~E~~il~~l~HpNIV~f~G-~~~~~~~--~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH 159 (362)
T KOG0192|consen 83 RKAFRREASLLSRLRHPNIVQFYG-ACTSPPG--SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH 159 (362)
T ss_pred HHHHHHHHHHHHhCCCCCeeeEEE-EEcCCCC--ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 445558889999999999999999 5555432 47999999 99999999965 4667999999999999999999999
Q ss_pred HCC-ceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 139 SQG-IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 139 s~g-IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+++ ||||||||+|||++.++ ++||+|||+++......
T Consensus 160 ~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~----------------------------------------- 198 (362)
T KOG0192|consen 160 SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK----------------------------------------- 198 (362)
T ss_pred cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-----------------------------------------
Confidence 999 99999999999999997 99998888874321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc--CCCCCccccc
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASDI 294 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~s~~sDI 294 (720)
. ..+...||+.|||||++. ...|+.++||
T Consensus 199 -----------------------------------------------~--~~~~~~GT~~wMAPEv~~~~~~~~~~K~Dv 229 (362)
T KOG0192|consen 199 -----------------------------------------------T--SMTSVAGTYRWMAPEVLRGEKSPYTEKSDV 229 (362)
T ss_pred -----------------------------------------------c--cccCCCCCccccChhhhcCCCCcCCccchh
Confidence 0 001146899999999999 5579999999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++||||+| ||........+.....+...|+......+....|+.+||+.||..||+..+|+.
T Consensus 230 ySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 230 YSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred hhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 999999999999 898887743333333344444333334455569999999999999999999874
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=305.81 Aligned_cols=218 Identities=19% Similarity=0.233 Sum_probs=169.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+-.+|+.||+++.|||||+|++ +. ++.....+|||+|| ..|.+. |.......+++.+++.|+++++.||+|||.||
T Consensus 154 kv~~EIailKkl~H~nVV~LiE-vL-DDP~s~~~YlVley~s~G~v~-w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg 230 (576)
T KOG0585|consen 154 KVRREIAILKKLHHPNVVKLIE-VL-DDPESDKLYLVLEYCSKGEVK-WCPPDKPELSEQQARKYLRDVVLGLEYLHYQG 230 (576)
T ss_pred HHHHHHHHHHhcCCcCeeEEEE-ee-cCcccCceEEEEEeccCCccc-cCCCCcccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 3348999999999999999999 44 55556689999999 666653 34223333899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|+||+++|+|||.|||.+..+.....+ ++
T Consensus 231 iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~-------------------------------~~----------- 268 (576)
T KOG0585|consen 231 IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE-------------------------------GS----------- 268 (576)
T ss_pred eeccccchhheEEcCCCcEEeeccceeeecccCCcc-------------------------------cc-----------
Confidence 999999999999999999999999998543111000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----CCccccchhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRL 297 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSL 297 (720)
. . .....+|||.|+|||.+.+.. .+.+.|||||
T Consensus 269 ---d-------------------~---------------------~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWal 305 (576)
T KOG0585|consen 269 ---D-------------------D---------------------QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWAL 305 (576)
T ss_pred ---H-------------------H---------------------HHhhcCCCccccchHhhcCCCCccccchhhhhhhh
Confidence 0 0 000148999999999998733 4789999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||+||-|+. ||...... ..+..|.+ ...-|......+...+||++||.+||.+|.++.+|..|||.....+
T Consensus 306 GVTLYCllfG~~PF~~~~~~-~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 306 GVTLYCLLFGQLPFFDDFEL-ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred hhhHHHhhhccCCcccchHH-HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 999999998 88887665 44444444 3334444455667779999999999999999999999999998733
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=331.23 Aligned_cols=200 Identities=26% Similarity=0.401 Sum_probs=156.7
Q ss_pred cEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCC
Q 004989 95 PFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 173 (720)
Q Consensus 95 ~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~ 173 (720)
.+||-|||+.-+|.+++ +.+...-.....+++|+||++||.|+|++|||||||||.||+|++++.|||.|||++...-.
T Consensus 670 ~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~ 749 (1351)
T KOG1035|consen 670 ILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKE 749 (1351)
T ss_pred EEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhh
Confidence 36999999554555555 43332115789999999999999999999999999999999999999999999998854210
Q ss_pred CCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccc
Q 004989 174 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 253 (720)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~ 253 (720)
. .+++.+... ....
T Consensus 750 ~---------------------------------~~~~d~~~~-----~~~~---------------------------- 763 (1351)
T KOG1035|consen 750 N---------------------------------LESIDQDLS-----FSTN---------------------------- 763 (1351)
T ss_pred h---------------------------------hhhHhhccC-----cccc----------------------------
Confidence 0 000000000 0000
Q ss_pred hhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccchhhhchhhhccccCCCCchHHHHHHHhhcCCCCcc-
Q 004989 254 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQ- 329 (720)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~- 329 (720)
.........+..+||.-|+|||++.+.. |+.++|||||||+||||+.||.+..+...++..++.+.+|..
T Consensus 764 ------~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~~ 837 (1351)
T KOG1035|consen 764 ------RAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEPA 837 (1351)
T ss_pred ------ccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCCc
Confidence 0000011224479999999999997765 999999999999999999999999999999999999999888
Q ss_pred --ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 330 --LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 330 --~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+.+..|.++.+|.|||..||++||||.|+|++.||..
T Consensus 838 ~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 838 DFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred ccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 7788899999999999999999999999999999986
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=288.10 Aligned_cols=231 Identities=17% Similarity=0.172 Sum_probs=176.8
Q ss_pred CCCCcccccccccCCCCcc---chhhch--hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC
Q 004989 41 NPRLLRGERFGVRGDDSND---FELRKH--SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK 113 (720)
Q Consensus 41 ~~~~~~~~r~~~~~~~~~~---~~~r~~--~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~ 113 (720)
+....+++.+...+.+... ...|++ +|..||.+ ..||+|+.+.+ +|+.+. .+++|+|+ ..|.|.++|..
T Consensus 41 t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D-~yes~s---F~FlVFdl~prGELFDyLts 116 (411)
T KOG0599|consen 41 TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD-VYESDA---FVFLVFDLMPRGELFDYLTS 116 (411)
T ss_pred cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee-eccCcc---hhhhhhhhcccchHHHHhhh
Confidence 3444555555555444332 333444 67778888 67999999999 777765 56999999 89999999954
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCC
Q 004989 114 PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193 (720)
Q Consensus 114 ~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (720)
. -.+++.+.+.|++||++|+.|||.++||||||||+|||++++.+++|.|||+++.....+
T Consensus 117 ~-VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Ge------------------ 177 (411)
T KOG0599|consen 117 K-VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGE------------------ 177 (411)
T ss_pred h-eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCch------------------
Confidence 4 349999999999999999999999999999999999999999999999999885432110
Q ss_pred CchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc
Q 004989 194 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 273 (720)
Q Consensus 194 ~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G 273 (720)
+....+|
T Consensus 178 -------------------------------------------------------------------------kLrelCG 184 (411)
T KOG0599|consen 178 -------------------------------------------------------------------------KLRELCG 184 (411)
T ss_pred -------------------------------------------------------------------------hHHHhcC
Confidence 1123689
Q ss_pred CCcccCcccccC------CCCCccccchhhhchhhhccccCCCCchHH--HHHHHhhcCCC---CccccccCchHHHHHH
Q 004989 274 TNWYASPEELAG------APVSCASDIYRLGVLLFELFCPFSTGEEKT--RTMSSLRHRVL---PPQLLLKFPKEASFCL 342 (720)
Q Consensus 274 T~~Y~APE~l~~------~~~s~~sDIwSLGvll~eLltpf~~~~~~~--~~~~~l~~~~~---p~~~~~~~p~~~~Li~ 342 (720)
||+|+|||.+.. ..|+..+|+|++|||||.||.+.+++-... .+...|..+.+ .|.+........+||.
T Consensus 185 TPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIs 264 (411)
T KOG0599|consen 185 TPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLIS 264 (411)
T ss_pred CCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHH
Confidence 999999999843 238999999999999999999555543322 22333444433 3444444455569999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCC
Q 004989 343 WLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||+.||.+|.|++|+|+||||.+.
T Consensus 265 rlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 265 RLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred HHHeeCchhcccHHHHhcChHHHHH
Confidence 9999999999999999999999764
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=294.29 Aligned_cols=239 Identities=18% Similarity=0.237 Sum_probs=177.0
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCC-ceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCC---C
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLR-NQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK---R 116 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~Hpn-IV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~---~ 116 (720)
..++.+++....+. +..-.-..||+.+|.+++|+| ||++++++..... ....+++|+||...+|..++.... .
T Consensus 37 ~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~ 115 (323)
T KOG0594|consen 37 KFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQ 115 (323)
T ss_pred CEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhcccccc
Confidence 34555555554442 111112337788999999999 9999994443331 233579999999999999996544 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCch
Q 004989 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
.++...++.+++||+.||+|||++||+||||||.||||+++|.+||+|||+|+.++.+.-
T Consensus 116 g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~-------------------- 175 (323)
T KOG0594|consen 116 GLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR-------------------- 175 (323)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc--------------------
Confidence 588899999999999999999999999999999999999999999999998865433310
Q ss_pred hhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004989 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 ~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~ 276 (720)
.-+..++|.|
T Consensus 176 ----------------------------------------------------------------------~yt~evvTlW 185 (323)
T KOG0594|consen 176 ----------------------------------------------------------------------TYTPEVVTLW 185 (323)
T ss_pred ----------------------------------------------------------------------cccccEEEee
Confidence 0122578999
Q ss_pred ccCcccccCCC-CCccccchhhhchhhhccc--c-CCCCchHHHHHHHhhcCCCC-------------------cc----
Q 004989 277 YASPEELAGAP-VSCASDIYRLGVLLFELFC--P-FSTGEEKTRTMSSLRHRVLP-------------------PQ---- 329 (720)
Q Consensus 277 Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt--p-f~~~~~~~~~~~~l~~~~~p-------------------~~---- 329 (720)
|+|||++.|.. |++.+||||+|||++||++ | |++..+........+.--.| ..
T Consensus 186 YRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~ 265 (323)
T KOG0594|consen 186 YRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPK 265 (323)
T ss_pred ccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCcc
Confidence 99999999985 9999999999999999999 4 44544443333333211111 00
Q ss_pred -c----cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchH
Q 004989 330 -L----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 330 -~----~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+ ....+...+++.+||+++|.+|.|+..+|.||||........
T Consensus 266 ~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 266 DLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred chHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchh
Confidence 0 011134459999999999999999999999999998855433
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=307.57 Aligned_cols=242 Identities=17% Similarity=0.164 Sum_probs=198.0
Q ss_pred cccccccccC--CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCH
Q 004989 30 RALNISGVSD--RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSL 107 (720)
Q Consensus 30 ~~~~~~~~~~--~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL 107 (720)
+-||+..|.. +|...+++++..++|..+....-....|+.+|.+++|||+|.+-+ +|..+. ..|+||||+-|+-
T Consensus 37 GSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkg-CyLre~---TaWLVMEYClGSA 112 (948)
T KOG0577|consen 37 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKG-CYLREH---TAWLVMEYCLGSA 112 (948)
T ss_pred CccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccc-eeeccc---hHHHHHHHHhccH
Confidence 3444444433 778889999999999988877777778899999999999999999 665553 4699999988899
Q ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccc
Q 004989 108 RQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMET 187 (720)
Q Consensus 108 ~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~ 187 (720)
.|+|.-...++.+.++..|..+.+.||.|||+.+.||||||..|||+++.|.|||.|||.+.....
T Consensus 113 sDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-------------- 178 (948)
T KOG0577|consen 113 SDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-------------- 178 (948)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc--------------
Confidence 998865666799999999999999999999999999999999999999999999999998733210
Q ss_pred cCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcc
Q 004989 188 KDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK 267 (720)
Q Consensus 188 ~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~ 267 (720)
T Consensus 179 -------------------------------------------------------------------------------- 178 (948)
T KOG0577|consen 179 -------------------------------------------------------------------------------- 178 (948)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCcccCcccccC---CCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HH
Q 004989 268 QILLMETNWYASPEELAG---APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SF 340 (720)
Q Consensus 268 ~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~L 340 (720)
...++|||+|||||++.. +.|+-++||||||+++.||.- |++..+... +...|.....|.-..+.|++.. .|
T Consensus 179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-ALYHIAQNesPtLqs~eWS~~F~~F 257 (948)
T KOG0577|consen 179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPTLQSNEWSDYFRNF 257 (948)
T ss_pred hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-HHHHHHhcCCCCCCCchhHHHHHHH
Confidence 012689999999999853 349999999999999999998 777666553 4444555555544556777665 99
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 341 CLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+..||++-|.+|||.+++|.|+|+...+.+
T Consensus 258 vd~CLqKipqeRptse~ll~H~fv~R~Rp~ 287 (948)
T KOG0577|consen 258 VDSCLQKIPQERPTSEELLKHRFVLRERPP 287 (948)
T ss_pred HHHHHhhCcccCCcHHHHhhcchhccCCCc
Confidence 999999999999999999999999877443
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=299.27 Aligned_cols=234 Identities=15% Similarity=0.164 Sum_probs=177.5
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCH
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDV 120 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~ 120 (720)
..++++++.+-.-...-..+| +|...++.++|||||+++. .|..+. .+|+||.| .+|++.++|+. ....++|
T Consensus 52 e~VAIK~inLEkc~~~ld~l~--kE~~~msl~~HPNIv~~~~-sFvv~~---~LWvVmpfMa~GS~ldIik~~~~~Gl~E 125 (516)
T KOG0582|consen 52 EVVAIKIINLEKCNNDLDALR--KEVQTMSLIDHPNIVTYHC-SFVVDS---ELWVVMPFMAGGSLLDIIKTYYPDGLEE 125 (516)
T ss_pred CEEEEEEeehhhhhhhHHHHH--HHHHHhhhcCCCCcceEEE-EEEecc---eeEEeehhhcCCcHHHHHHHHccccccH
Confidence 556666666654443323334 4566888899999999999 554444 47999999 99999999943 3344999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhh
Q 004989 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
..+..|+++++.||+|||.+|-||||||+.||||+.+|.|||.|||.....
T Consensus 126 ~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l----------------------------- 176 (516)
T KOG0582|consen 126 ASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL----------------------------- 176 (516)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee-----------------------------
Confidence 999999999999999999999999999999999999999999999876221
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCc
Q 004989 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.|-|. + +. .+....+||++||||
T Consensus 177 -------~~~G~-R-----------------------------------------------~~--~rf~tfvgtp~wmAP 199 (516)
T KOG0582|consen 177 -------FDSGD-R-----------------------------------------------QV--TRFNTFVGTPCWMAP 199 (516)
T ss_pred -------cccCc-e-----------------------------------------------ee--EeeccccCcccccCh
Confidence 11110 0 00 000125899999999
Q ss_pred ccccCCC--CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc---------hHHHHHHHcCC
Q 004989 281 EELAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP---------KEASFCLWLLH 346 (720)
Q Consensus 281 E~l~~~~--~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p---------~~~~Li~~~L~ 346 (720)
|++...- |++++||||||++..||.+ ||....+....+..+.+..+.+. ....+ ....++..||.
T Consensus 200 Evl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~-t~~~~~d~~k~~~ksf~e~i~~CL~ 278 (516)
T KOG0582|consen 200 EVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL-TSGLDKDEDKKFSKSFREMIALCLV 278 (516)
T ss_pred HHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc-cccCChHHhhhhcHHHHHHHHHHhh
Confidence 9975543 9999999999999999999 78777776666666665433222 22112 22389999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.||.+||||.++|.|+||+....
T Consensus 279 kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 279 KDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred cCcccCCCHHHHhccHHHhhccc
Confidence 99999999999999999998744
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=307.35 Aligned_cols=206 Identities=20% Similarity=0.265 Sum_probs=168.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|..|+..++|||||.+++ +|+... ++|+|.||.-|+|..+|...+ .++|+.++.|..|++.||.|||+.+|+||
T Consensus 50 ~ev~i~r~lkHpniv~m~e-sfEt~~---~~~vVte~a~g~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~rilhr 124 (808)
T KOG0597|consen 50 QEVRILRSLKHPNIVEMLE-SFETSA---HLWVVTEYAVGDLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSNRILHR 124 (808)
T ss_pred HHHHHHHhcCCcchhhHHH-hhcccc---eEEEEehhhhhhHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 6777999999999999999 887775 679999996669999996554 49999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccc
Q 004989 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
|+||.|||+...|.+|++|||+++..+...
T Consensus 125 d~kPqniLl~~~~~~KlcdFg~Ar~m~~~t-------------------------------------------------- 154 (808)
T KOG0597|consen 125 DMKPQNILLEKGGTLKLCDFGLARAMSTNT-------------------------------------------------- 154 (808)
T ss_pred cCCcceeeecCCCceeechhhhhhhcccCc--------------------------------------------------
Confidence 999999999999999998887774322110
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhcc
Q 004989 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
.-.+...|||.|||||++.+.+|+..+|+||||||+|||+
T Consensus 155 ----------------------------------------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~ 194 (808)
T KOG0597|consen 155 ----------------------------------------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELY 194 (808)
T ss_pred ----------------------------------------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHh
Confidence 0002257999999999999999999999999999999999
Q ss_pred c---cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 306 C---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 306 t---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+ ||....-. .....|.+ ...||. ...+....|+..+|.+||.+|.|..+++.|||+++...
T Consensus 195 ~G~PPF~a~si~-~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 195 VGQPPFYARSIT-QLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred cCCCCchHHHHH-HHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 9 55543333 33333333 333333 44566679999999999999999999999999987643
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=302.38 Aligned_cols=241 Identities=18% Similarity=0.200 Sum_probs=181.7
Q ss_pred CcccccccccC------CC-CCCcccccccccCCCCccchhhchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEE
Q 004989 29 SRALNISGVSD------RN-PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAI 100 (720)
Q Consensus 29 ~~~~~~~~~~~------~~-~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~ 100 (720)
++.+|.+.++. .. -+..+.+.+.-+............+|..+|.++. |||||.+++ +|++.. .+++||
T Consensus 40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~-~~e~~~---~~~lvm 115 (382)
T KOG0032|consen 40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKD-AFEDPD---SVYLVM 115 (382)
T ss_pred hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEE-EEEcCC---eEEEEE
Confidence 45566655554 22 2333333333333333333334458888999999 999999999 777765 679999
Q ss_pred ec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccC----CceEEeecCcccCCCCCC
Q 004989 101 EW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF----NHVSFIESASCSDSGSDS 175 (720)
Q Consensus 101 E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~ 175 (720)
|+ .||.|.+.|.+. . +++..+..+++||+.++.|||+.||+||||||+|||+... +.+|++|||++.......
T Consensus 116 EL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~ 193 (382)
T KOG0032|consen 116 ELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE 193 (382)
T ss_pred EecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence 99 999999999554 3 9999999999999999999999999999999999999733 479998888874332110
Q ss_pred cccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchh
Q 004989 176 HEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVE 255 (720)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~ 255 (720)
T Consensus 194 -------------------------------------------------------------------------------- 193 (382)
T KOG0032|consen 194 -------------------------------------------------------------------------------- 193 (382)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCC--CCcc-
Q 004989 256 QVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQ- 329 (720)
Q Consensus 256 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~- 329 (720)
.....+||+.|+|||++.+.+|+..+||||+||++|.|++ ||.......... .+..+. ++..
T Consensus 194 -----------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~i~~~~~~f~~~~ 261 (382)
T KOG0032|consen 194 -----------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-AILRGDFDFTSEP 261 (382)
T ss_pred -----------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-HHHcCCCCCCCCC
Confidence 0012689999999999999999999999999999999999 666655443333 333332 3333
Q ss_pred ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 330 ~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+...+....+|+..||..||..|+|+.++|+|||++..
T Consensus 262 w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 262 WDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred ccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 33344445599999999999999999999999999986
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-34 Score=304.62 Aligned_cols=211 Identities=18% Similarity=0.197 Sum_probs=173.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
-.+.|..+++++.|||||.+++.|.+++. .++|||+| .||+|.+.|. +.+..+++..+..||.||+.||.|||+.
T Consensus 49 ~A~~E~~lis~~~hP~iv~y~ds~~~~~~---~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~ 125 (426)
T KOG0589|consen 49 SAIQEMDLLSKLLHPNIVEYKDSFEEDGQ---LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN 125 (426)
T ss_pred HHHHHHHHHHhccCCCeeeeccchhcCCc---eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh
Confidence 45588999999999999999996666653 48999999 9999999993 3446689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
.|+|||||+.||+++.++.|+|.|||+++..+.+. +|
T Consensus 126 ~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---------------------------------~~---------- 162 (426)
T KOG0589|consen 126 RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED---------------------------------SL---------- 162 (426)
T ss_pred hhhcccchhhhhhccccCceeecchhhhhhcCCch---------------------------------hh----------
Confidence 99999999999999999999997777775543320 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....+|||.||+||++.+.+|+.++|||||||+
T Consensus 163 -----------------------------------------------a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~ 195 (426)
T KOG0589|consen 163 -----------------------------------------------ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCC 195 (426)
T ss_pred -----------------------------------------------hheecCCCcccCHHHhCCCCCCccCcchhhcch
Confidence 012689999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ +|...+...-.. .+......|...........++..||..+|..||++.++|.+|.+...
T Consensus 196 ~yEm~~lk~aF~a~~m~~Li~-ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 196 LYEMCTLKPAFKASNMSELIL-KINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHHHHhcccccCccchHHHHH-HHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 999999 677765554444 444444555444455566699999999999999999999999877655
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=300.29 Aligned_cols=203 Identities=16% Similarity=0.161 Sum_probs=162.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. .+|++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 48 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 122 (291)
T cd05612 48 VHNEKRVLKEVSHPFIIRLFW-TEHDQR---FLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEI 122 (291)
T ss_pred HHHHHHHHHhCCCCcHhhhHh-hhccCC---eEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 446778999999999999999 444432 68999999 8999999995543 58999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......
T Consensus 123 ~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 154 (291)
T cd05612 123 VYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------------------------------------------------ 154 (291)
T ss_pred eecCCCHHHeEECCCCCEEEEecCcchhccCC------------------------------------------------
Confidence 99999999999999999999999887321000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 155 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 189 (291)
T cd05612 155 ---------------------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIY 189 (291)
T ss_pred ---------------------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHH
Confidence 00136799999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+..... .++. ..+...+||.+||..||.+||+ +.++++||||...
T Consensus 190 ~l~~g~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 190 EMLVGYPPFFDDNPF-GIYEKILAGKL--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhCCc--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 9999 66655443 33333333221 1112 2345569999999999999995 9999999999865
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=305.06 Aligned_cols=204 Identities=16% Similarity=0.179 Sum_probs=164.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ .+.++. .+|++||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 64 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 138 (329)
T PTZ00263 64 HVAQEKSILMELSHPFIVNMMC-SFQDEN---RVYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSKD 138 (329)
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEcCC---EEEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555443 57999999 8999999996544 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......
T Consensus 139 ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----------------------------------------------- 171 (329)
T PTZ00263 139 IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR----------------------------------------------- 171 (329)
T ss_pred eeecCCCHHHEEECCCCCEEEeeccCceEcCCC-----------------------------------------------
Confidence 999999999999999999999999887321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 172 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 205 (329)
T PTZ00263 172 ----------------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLL 205 (329)
T ss_pred ----------------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHH
Confidence 0013689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....++ ++. ..+...+||.+||+.||.+||+ +.+++.||||...
T Consensus 206 ~elltg~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 206 YEFIAGYPPFFDDTPF-RIYEKILAGRLK--FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHhcCCcC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 99999 66554433 344444443322 112 2234569999999999999986 7999999999874
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=314.44 Aligned_cols=221 Identities=19% Similarity=0.271 Sum_probs=177.7
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 004989 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
+||.++++|. +|+... ++|+|||| .||++..++ ....+++..++.|+..|+.||.|||++|||+||||.+|||
T Consensus 427 ~HPFL~~L~~-~fQT~~---~l~fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiL 500 (694)
T KOG0694|consen 427 RHPFLVNLFS-CFQTKE---HLFFVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLL 500 (694)
T ss_pred cCCeEeeccc-ccccCC---eEEEEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheE
Confidence 6999999999 776665 68999999 999965544 2234999999999999999999999999999999999999
Q ss_pred EccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccc
Q 004989 154 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 233 (720)
Q Consensus 154 l~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~ 233 (720)
|+..|++||+|||+|+.--.. ++
T Consensus 501 LD~eGh~kiADFGlcKe~m~~---------------------------------g~------------------------ 523 (694)
T KOG0694|consen 501 LDTEGHVKIADFGLCKEGMGQ---------------------------------GD------------------------ 523 (694)
T ss_pred EcccCcEEecccccccccCCC---------------------------------CC------------------------
Confidence 999999999999999531000 00
Q ss_pred cccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCC
Q 004989 234 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 310 (720)
Q Consensus 234 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~ 310 (720)
+..+.+|||.|||||++.+..|+.++|+|||||+|||||. ||.+
T Consensus 524 ---------------------------------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 524 ---------------------------------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred ---------------------------------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence 1122699999999999999999999999999999999999 8988
Q ss_pred CchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC-ccchHHHHHHHHHhhh
Q 004989 311 GEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP-RDSMEEREAAIELREQ 383 (720)
Q Consensus 311 ~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~-~~~l~e~~~~~~~~e~ 383 (720)
.++....-..+....+.|.+ .+.+ .+++.++|..+|++|.. +++|.+||||+.. ++.++.+..++++.+.
T Consensus 571 ddEee~FdsI~~d~~~yP~~---ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~ 647 (694)
T KOG0694|consen 571 DDEEEVFDSIVNDEVRYPRF---LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPT 647 (694)
T ss_pred CCHHHHHHHHhcCCCCCCCc---ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcc
Confidence 77764433444334443433 2444 49999999999999973 6899999999987 6778888888888887
Q ss_pred hhhHHHHHHHH
Q 004989 384 IDEEELLLEFL 394 (720)
Q Consensus 384 ~~~~e~L~~fL 394 (720)
+...+....|-
T Consensus 648 i~~~~D~snFd 658 (694)
T KOG0694|consen 648 IKGPEDVSNFD 658 (694)
T ss_pred cCChhhhcccc
Confidence 77655555443
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=302.03 Aligned_cols=207 Identities=18% Similarity=0.257 Sum_probs=163.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ .+.... .+|+|||| .|++|.+++... ..+++..++.++.||+.||+|||++|
T Consensus 41 ~~~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ 115 (323)
T cd05571 41 HTLTESRVLQNTRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCD 115 (323)
T ss_pred HHHHHHHHHHhCCCCCCCCEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447788999999999999999 555443 67999999 899999999554 35899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... .
T Consensus 116 ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---------------------------------~------------ 150 (323)
T cd05571 116 VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---------------------------------A------------ 150 (323)
T ss_pred eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC---------------------------------C------------
Confidence 9999999999999999999999999873210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 151 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 185 (323)
T cd05571 151 ---------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185 (323)
T ss_pred ---------------------------------------------cccceecCccccChhhhcCCCCCccccCcccchhh
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+..... .++. ..+...+||.+||+.||++|| ++.++++||||...
T Consensus 186 ~elltg~~Pf~~~~~~-~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 186 YEMMCGRLPFYNQDHE-KLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred hhhhcCCCCCCCCCHH-HHHHHHHcCCC--CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 99999 66554433 23333332211 1222 234556999999999999999 89999999999885
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=299.79 Aligned_cols=207 Identities=17% Similarity=0.248 Sum_probs=163.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 39 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 113 (312)
T cd05585 39 HTLAERTVLAQVNCPFIVPLKF-SFQSPE---KLYLVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKFN 113 (312)
T ss_pred HHHHHHHHHHhCCCCcEeceee-EEecCC---eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999998 555443 67999999 9999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++....... +
T Consensus 114 i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 148 (312)
T cd05585 114 VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD---------------------------------D------------ 148 (312)
T ss_pred eEeCCCCHHHeEECCCCcEEEEECcccccCccCC---------------------------------C------------
Confidence 9999999999999999999999999874210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 149 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 183 (312)
T cd05585 149 ---------------------------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLL 183 (312)
T ss_pred ---------------------------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+... +..++... +...+|+.+||.+||.+|| ++.|+|.||||...
T Consensus 184 ~el~tg~~pf~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 184 YEMLTGLPPFYDENVN-EMYRKILQE--PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHHHhCCCCcCCCCHH-HHHHHHHcC--CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 99999 66554433 233333322 12222233 4455999999999999997 58999999999875
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=296.09 Aligned_cols=214 Identities=18% Similarity=0.212 Sum_probs=165.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCC-CCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~-~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+|..+|..++|||||++...++..... .....+||||...+|.++++. .+..++..+++-|.+||++||.|||+.|
T Consensus 66 rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~ 145 (364)
T KOG0658|consen 66 RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG 145 (364)
T ss_pred HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC
Confidence 888899999999999999855544444 346788999988999999963 3556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC-CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 142 IVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+||||||.|+|++.+ |.+||||||.|+.....+
T Consensus 146 IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e--------------------------------------------- 180 (364)
T KOG0658|consen 146 ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE--------------------------------------------- 180 (364)
T ss_pred cccCCCChheEEEcCCCCeEEeccCCcceeeccCC---------------------------------------------
Confidence 9999999999999955 999999999985431110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
.+..+..|..|+|||.+.|.. |+++.||||.||
T Consensus 181 ----------------------------------------------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGC 214 (364)
T KOG0658|consen 181 ----------------------------------------------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGC 214 (364)
T ss_pred ----------------------------------------------CceeEEEeccccCHHHHcCccccCceeEEhhhhH
Confidence 001256799999999999987 999999999999
Q ss_pred hhhhccc--cC-CCCchHHHHHHHhhc-C-----------------CCC---cc-----cc-ccCchHHHHHHHcCCCCC
Q 004989 300 LLFELFC--PF-STGEEKTRTMSSLRH-R-----------------VLP---PQ-----LL-LKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 300 ll~eLlt--pf-~~~~~~~~~~~~l~~-~-----------------~~p---~~-----~~-~~~p~~~~Li~~~L~~dP 349 (720)
++.||+- |. ++.....+....+.- + .+| +. +. ...|+..+|+.++|.++|
T Consensus 215 V~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P 294 (364)
T KOG0658|consen 215 VMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSP 294 (364)
T ss_pred HHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccCh
Confidence 9999998 43 333332222211110 0 001 00 11 123455699999999999
Q ss_pred CCCCChHHHHcCcccCCCccc
Q 004989 350 SGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+|.++.|+|.||||.+.+++
T Consensus 295 ~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 295 SKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hhcCCHHHHhcchhhHHhhCc
Confidence 999999999999999988664
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=295.83 Aligned_cols=214 Identities=15% Similarity=0.200 Sum_probs=161.9
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+..+|..+++.++||||+++++ ++.+.. ..|+||||.+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 48 ~~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 123 (303)
T cd07869 48 FTAIREASLLKGLKHANIVLLHD-IIHTKE---TLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY 123 (303)
T ss_pred hhHHHHHHHHhhCCCCCcCeEEE-EEecCC---eEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34457888999999999999999 555443 57999999778999999666566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... .
T Consensus 124 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------------------------~------------- 158 (303)
T cd07869 124 ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--------------------------------H------------- 158 (303)
T ss_pred eecCCCCHHHEEECCCCCEEECCCCcceeccCCC--------------------------------c-------------
Confidence 9999999999999999999999998873211100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+.. ++.++|||||||+
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i 193 (303)
T cd07869 159 ---------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCI 193 (303)
T ss_pred ---------------------------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHH
Confidence 000135799999999987654 8899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhc---CC----------------------CCcccc------ccCchHHHHHHHcCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRH---RV----------------------LPPQLL------LKFPKEASFCLWLLH 346 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~---~~----------------------~p~~~~------~~~p~~~~Li~~~L~ 346 (720)
+|||++ ||............+.. .. .+..+. ...+...+|+.+||+
T Consensus 194 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 273 (303)
T cd07869 194 FVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQ 273 (303)
T ss_pred HHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhc
Confidence 999999 66654332222211110 00 000000 011344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+|||+.|+|+||||+....
T Consensus 274 ~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 274 CFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred cCchhccCHHHHhcCcccccCCh
Confidence 99999999999999999988643
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-33 Score=299.50 Aligned_cols=219 Identities=15% Similarity=0.159 Sum_probs=161.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++++.... .....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 45 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ 123 (338)
T cd07859 45 RILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTAN 123 (338)
T ss_pred HHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4557888999999999999999443222 2233589999998789999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 124 ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------------------- 159 (338)
T cd07859 124 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT-------------------------------------------- 159 (338)
T ss_pred eecCCCCHHHeEECCCCcEEEccCccccccccccCc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC--CCCCccccchhhhc
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLGv 299 (720)
.......+||+.|+|||++.+ ..++.++|||||||
T Consensus 160 -------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGv 196 (338)
T cd07859 160 -------------------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 196 (338)
T ss_pred -------------------------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHH
Confidence 000011478999999999876 45899999999999
Q ss_pred hhhhccc---cCCCCchHHH--HH------------------------HHhhcCCCC---ccccccCchHHHHHHHcCCC
Q 004989 300 LLFELFC---PFSTGEEKTR--TM------------------------SSLRHRVLP---PQLLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~--~~------------------------~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~ 347 (720)
++|||++ ||........ .+ ..+...... ..+....+...+|+.+||..
T Consensus 197 vl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 276 (338)
T cd07859 197 IFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAF 276 (338)
T ss_pred HHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCc
Confidence 9999999 5544322110 00 001110000 11112234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004989 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++|||+.|+|+||||+....
T Consensus 277 ~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 277 DPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred CcccCCCHHHHhcCchhhhcCc
Confidence 9999999999999999987644
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=293.05 Aligned_cols=208 Identities=16% Similarity=0.198 Sum_probs=157.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..++.+++||||+++++ ++.... .+++||||.+++|.+++...+..+++..++.++.||+.||+|||++||
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 124 (288)
T cd07871 49 TAIREVSLLKNLKHANIVTLHD-IIHTER---CLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI 124 (288)
T ss_pred hHHHHHHHHHhCCCCCEeeEEE-EEcCCC---eEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3346788999999999999999 554443 579999996679999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++....... .
T Consensus 125 vH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---------------------------------~------------- 158 (288)
T cd07871 125 LHRDLKPQNLLINEKGELKLADFGLARAKSVPT---------------------------------K------------- 158 (288)
T ss_pred ccCCCCHHHEEECCCCCEEECcCcceeeccCCC---------------------------------c-------------
Confidence 999999999999999999999998874321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+. .++.++|||||||++
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 194 (288)
T cd07871 159 --------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIL 194 (288)
T ss_pred --------------------------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHH
Confidence 00013578999999998764 489999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC--------------------CCCcc--------ccccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHR--------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~--------------------~~p~~--------~~~~~p~~~~Li~~~L~~dP~ 350 (720)
|||++ ||............+... .+|.. .....++..+||.+||++||.
T Consensus 195 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~ 274 (288)
T cd07871 195 YEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETK 274 (288)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcc
Confidence 99999 565543332221111100 00000 011123455999999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||++|+|+||||
T Consensus 275 ~R~t~~~~l~hp~f 288 (288)
T cd07871 275 SRISAEAALRHSYF 288 (288)
T ss_pred cCCCHHHHhcCCCC
Confidence 99999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=302.58 Aligned_cols=203 Identities=16% Similarity=0.141 Sum_probs=163.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++|||||++++ ++.+.. .+|++||| .|++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 78 ~~~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 152 (340)
T PTZ00426 78 VFSERKILNYINHPFCVNLYG-SFKDES---YLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSLNI 152 (340)
T ss_pred HHHHHHHHHhCCCCCCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346788999999999999999 555443 68999999 8999999995544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......
T Consensus 153 vHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~------------------------------------------------ 184 (340)
T PTZ00426 153 VYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR------------------------------------------------ 184 (340)
T ss_pred EccCCCHHHEEECCCCCEEEecCCCCeecCCC------------------------------------------------
Confidence 99999999999999999999999887321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 185 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 219 (340)
T PTZ00426 185 ---------------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIY 219 (340)
T ss_pred ---------------------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHH
Confidence 00136899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+...... ++.. .+...+|+.+||+.||.+|+ ++.++++||||...
T Consensus 220 ell~G~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 220 EILVGCPPFYANEPL-LIYQKILEGIIY--FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred HHhcCCCCCCCCCHH-HHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999 66654443 334444433221 1122 23455999999999999995 89999999999875
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=295.45 Aligned_cols=209 Identities=13% Similarity=0.167 Sum_probs=161.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ .+.+.. .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 46 ~~~~E~~il~~l~~~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 121 (285)
T cd05631 46 MALNEKRILEKVNSRFVVSLAY-AYETKD---ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE 121 (285)
T ss_pred HHHHHHHHHHhcCCCcEEEEEE-EEccCC---eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3446888999999999999999 554443 57999999 89999988843 334589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||++.......
T Consensus 122 ~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 156 (285)
T cd05631 122 RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE--------------------------------------------- 156 (285)
T ss_pred CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC---------------------------------------------
Confidence 99999999999999999999999998873211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 157 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvi 190 (285)
T cd05631 157 ----------------------------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCL 190 (285)
T ss_pred ----------------------------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHH
Confidence 0001368999999999998889999999999999
Q ss_pred hhhccc---cCCCCchH---HHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~~ 368 (720)
+|||++ ||...... ......+... +..+... .+...+|+.+||..||.+||+ ++++++||||....
T Consensus 191 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 191 IYEMIQGQSPFRKRKERVKREEVDRRVKED--QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred HHHHHhCCCCCCCCCcchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 999999 66554321 1112222111 1122222 344559999999999999997 89999999999873
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=277.24 Aligned_cols=202 Identities=19% Similarity=0.273 Sum_probs=156.4
Q ss_pred CCCCCceecccceeecC-CCCCcEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 004989 74 GDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 74 l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~ 150 (720)
-.|||||.+++ +|+.. .....+.+|||+ .||.|...|. +....+++.++-.|++||..||.|||+.+|.||||||+
T Consensus 112 s~h~~iV~Iid-VyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpE 190 (400)
T KOG0604|consen 112 SGHPHIVSIID-VYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPE 190 (400)
T ss_pred cCCCceEEeeh-hhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChh
Confidence 46999999999 55443 334457889999 9999999993 44556999999999999999999999999999999999
Q ss_pred cEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 151 CFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 151 NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
|+|.. .+..+||+|||+|+....+ .++
T Consensus 191 NLLyt~t~~na~lKLtDfGFAK~t~~~---------------------------------~~L----------------- 220 (400)
T KOG0604|consen 191 NLLYTTTSPNAPLKLTDFGFAKETQEP---------------------------------GDL----------------- 220 (400)
T ss_pred heeeecCCCCcceEecccccccccCCC---------------------------------ccc-----------------
Confidence 99997 4456788777776432111 000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhcccc
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
...+-||+|.|||++-...|+.+.|+|||||++|-|||+
T Consensus 221 -----------------------------------------~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCG 259 (400)
T KOG0604|consen 221 -----------------------------------------MTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259 (400)
T ss_pred -----------------------------------------cCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcC
Confidence 113559999999999888899999999999999999995
Q ss_pred CCCC---ch--H-HHHHHHhhc--CCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 308 FSTG---EE--K-TRTMSSLRH--RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 308 f~~~---~~--~-~~~~~~l~~--~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+++ .. . --+...|+. ..+|..-+...++.+ ++|+.+|..+|.+|.|+.+++.|||+++.
T Consensus 260 yPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 260 YPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred CCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 5543 11 0 112233333 345555555555555 99999999999999999999999999987
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=290.49 Aligned_cols=205 Identities=17% Similarity=0.217 Sum_probs=152.8
Q ss_pred hhcccCCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q 004989 69 VELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 146 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrD 146 (720)
..|..++||||+++++.+... ......++++|||.+++|.+++.. ....+++..++.++.||+.||.|||++||+|||
T Consensus 56 ~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~d 135 (290)
T cd07862 56 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD 135 (290)
T ss_pred HhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence 344556899999999943322 122346899999977899999944 334589999999999999999999999999999
Q ss_pred CCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccc
Q 004989 147 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 147 LKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
|||+|||++.++.++|+|||++.......
T Consensus 136 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------------- 164 (290)
T cd07862 136 LKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------------- 164 (290)
T ss_pred CCHHHEEEcCCCCEEEccccceEeccCCc---------------------------------------------------
Confidence 99999999999999999998873321000
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc
Q 004989 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 165 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 204 (290)
T cd07862 165 ----------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 204 (290)
T ss_pred ----------------------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHc
Confidence 0011367999999999988889999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCC--c----------------------cccccC-chHHHHHHHcCCCCCCCCCChHHH
Q 004989 307 ---PFSTGEEKTRTMSSLRHRVLP--P----------------------QLLLKF-PKEASFCLWLLHPEPSGRPKMGEL 358 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p--~----------------------~~~~~~-p~~~~Li~~~L~~dP~~Rpta~ei 358 (720)
||............+.....| . .+.... +...+|+.+||++||++|||+.|+
T Consensus 205 g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 284 (290)
T cd07862 205 RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 284 (290)
T ss_pred CCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHH
Confidence 565544332222222111000 0 011112 233599999999999999999999
Q ss_pred HcCccc
Q 004989 359 LQSEFL 364 (720)
Q Consensus 359 L~hp~~ 364 (720)
|+||||
T Consensus 285 l~hp~f 290 (290)
T cd07862 285 LSHPYF 290 (290)
T ss_pred hcCCCC
Confidence 999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-33 Score=295.07 Aligned_cols=244 Identities=16% Similarity=0.217 Sum_probs=186.4
Q ss_pred eeecCCCcccccccccCCcccccccccCCCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCC
Q 004989 12 RIIMEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA 91 (720)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~ 91 (720)
-|.+|..++=-|..+++-+++-.+-+. .+.+++++ ..--+|.++..|.+|+||||+.+.| +|....
T Consensus 120 eiPFe~IsELeWlGSGaQGAVF~Grl~---netVAVKK----------V~elkETdIKHLRkLkH~NII~FkG-VCtqsP 185 (904)
T KOG4721|consen 120 EIPFEEISELEWLGSGAQGAVFLGRLH---NETVAVKK----------VRELKETDIKHLRKLKHPNIITFKG-VCTQSP 185 (904)
T ss_pred cCCHHHhhhhhhhccCcccceeeeecc---CceehhHH----------HhhhhhhhHHHHHhccCcceeeEee-eecCCc
Confidence 466777777778776666655544332 23333332 1224568888999999999999999 554443
Q ss_pred CCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 92 AIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 92 ~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
-+||+||| ..|.|.+.|+. ++.++......|..+|+.|+.|||.+.|||||||.-||||+.+..|||+|||.++.
T Consensus 186 ---cyCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e 261 (904)
T KOG4721|consen 186 ---CYCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKE 261 (904)
T ss_pred ---eeEEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHh
Confidence 57999999 89999999954 45689999999999999999999999999999999999999999999999998743
Q ss_pred CCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccc
Q 004989 171 SGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDN 250 (720)
Q Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~ 250 (720)
.. |.
T Consensus 262 ~~------------------------------------~~---------------------------------------- 265 (904)
T KOG4721|consen 262 LS------------------------------------DK---------------------------------------- 265 (904)
T ss_pred hh------------------------------------hh----------------------------------------
Confidence 21 00
Q ss_pred ccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCC
Q 004989 251 RVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327 (720)
Q Consensus 251 g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p 327 (720)
-+...+.||..|||||++...+++.++|||||||+|||||| ||...+.. .++--+....+.
T Consensus 266 ---------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-AIIwGVGsNsL~ 329 (904)
T KOG4721|consen 266 ---------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-AIIWGVGSNSLH 329 (904)
T ss_pred ---------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-eeEEeccCCccc
Confidence 00122689999999999999999999999999999999999 77664433 122222334444
Q ss_pred ccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 328 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 328 ~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
-..+..+|+.. -|++.||.-.|..||++.+||.|==|.
T Consensus 330 LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 330 LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 44556777766 678889999999999999999985333
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-33 Score=298.34 Aligned_cols=204 Identities=17% Similarity=0.238 Sum_probs=162.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+|.+++||||+++++ .+.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~iv 123 (333)
T cd05600 49 LTERDILTTTKSEWLVKLLY-AFQDDE---YLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHELGYI 123 (333)
T ss_pred HHHHHHHHhCCCCCCccEEE-EEEcCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36777899999999999999 555443 68999999 8999999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++......
T Consensus 124 H~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~------------------------------------------------- 154 (333)
T cd05600 124 HRDLKPENFLIDASGHIKLTDFGLSKGIVTY------------------------------------------------- 154 (333)
T ss_pred ccCCCHHHEEECCCCCEEEEeCcCCcccccc-------------------------------------------------
Confidence 9999999999999999999999887321000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||+.|+|||++.+..++.++|||||||++||
T Consensus 155 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 190 (333)
T cd05600 155 --------------------------------------------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYE 190 (333)
T ss_pred --------------------------------------------cCCcccCccccChhHhcCCCCCCccceecchHHHhh
Confidence 011468999999999999899999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC---CCCcccc----ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHR---VLPPQLL----LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~---~~p~~~~----~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+... ...+... ...+...+|+.+||..+|.+||++.++++||||...
T Consensus 191 ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 191 FLCGFPPFSGSTPN-ETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred hhhCCCCCCCCCHH-HHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 999 66554332 222222221 1111111 223455699999999999999999999999999975
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=298.59 Aligned_cols=210 Identities=18% Similarity=0.236 Sum_probs=166.9
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.||+.++||+||+||+.+|..+ .++++.|| +||-...++-.-++.|++.++..+++|+++||.|||+++|||
T Consensus 78 VEIeILa~CdHP~ivkLl~ayy~en----kLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIH 153 (1187)
T KOG0579|consen 78 VEIEILAECDHPVIVKLLSAYYFEN----KLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIH 153 (1187)
T ss_pred hhhhhhhcCCChHHHHHHHHHhccC----ceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhh
Confidence 6778999999999999999777665 47999999 788888877777788999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..|||++-+|.++|+|||++...-..
T Consensus 154 RDLKAGNiL~TldGdirLADFGVSAKn~~t-------------------------------------------------- 183 (1187)
T KOG0579|consen 154 RDLKAGNILLTLDGDIRLADFGVSAKNKST-------------------------------------------------- 183 (1187)
T ss_pred hhccccceEEEecCcEeeecccccccchhH--------------------------------------------------
Confidence 999999999999999999999986211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
-.+...++|||+|||||++. ..+|++++||||||+
T Consensus 184 ----------------------------------------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGI 223 (1187)
T KOG0579|consen 184 ----------------------------------------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGI 223 (1187)
T ss_pred ----------------------------------------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhh
Confidence 00112268999999999974 456999999999999
Q ss_pred hhhhccccCCCC--chHHHHHHHhhcCCCCccc-cccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFCPFSTG--EEKTRTMSSLRHRVLPPQL-LLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLltpf~~~--~~~~~~~~~l~~~~~p~~~-~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|.||.-.-++. -.....+..+.+..+|.-+ ++.|... .||+.+||..||..||++.+||+||||.....
T Consensus 224 TLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 224 TLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred HHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 999999833232 2223444445444433322 3455544 49999999999999999999999999997644
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=301.85 Aligned_cols=257 Identities=15% Similarity=0.227 Sum_probs=166.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ .+.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++|
T Consensus 47 ~~~~E~~il~~l~h~~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 47 HVKAERDILAEADNEWVVKLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred HHHHHHHHHHhcCCCCeeeeEE-EEecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457778999999999999999 555443 68999999 8999999995544 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+++++|+|||++..+............. ..+. ....+... ..+..
T Consensus 122 ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~--------~~~~~---------- 181 (381)
T cd05626 122 FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGS-HIRQ-DSMEPSDL--------WDDVS---------- 181 (381)
T ss_pred eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccc-cccc-cccCcccc--------ccccc----------
Confidence 9999999999999999999999999986543221100000000 0000 00000000 00000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.+ ..+. ...+.. ...............+||+.|+|||++.+..++.++|||||||++
T Consensus 182 --~~-----~~~~-----------~~~~~~-----~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 182 --NC-----RCGD-----------RLKTLE-----QRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred --cc-----cccc-----------ccchhh-----ccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 00 0000 000000 000000000001225799999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh--cCCCCccccccCchHHHHHHHcC--CCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~--~~~~p~~~~~~~p~~~~Li~~~L--~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||............+. .....+......+...+||.+|| ..+|..||++.++++||||...
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 99999 6665544333332222 11111222234456679999855 4555669999999999999875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=296.33 Aligned_cols=207 Identities=17% Similarity=0.245 Sum_probs=162.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 41 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ 115 (328)
T cd05593 41 HTLTESRVLKNTRHPFLTSLKY-SFQTKD---RLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGK 115 (328)
T ss_pred HHHHHHHHHHhCCCCCCcceEE-EEEcCC---EEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457788999999999999998 555443 67999999 899999998544 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.......
T Consensus 116 ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~---------------------------------------------- 149 (328)
T cd05593 116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA---------------------------------------------- 149 (328)
T ss_pred eEecccCHHHeEECCCCcEEEecCcCCccCCCcc----------------------------------------------
Confidence 9999999999999999999999998873210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+||+.|+|||++.+..++.++|||||||++
T Consensus 150 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 185 (328)
T cd05593 150 --------------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185 (328)
T ss_pred --------------------------------------------cccccccCCcCccChhhhcCCCCCccCCccccchHH
Confidence 000114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+..... .++.. .+...+|+.+||.+||.+|| ++.++++||||...
T Consensus 186 ~elltG~~Pf~~~~~~-~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 186 YEMMCGRLPFYNQDHE-KLFELILMEDI--KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred HHHhhCCCCCCCCCHH-HHHHHhccCCc--cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999 66554332 22223222111 12222 34556999999999999997 89999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=272.54 Aligned_cols=245 Identities=16% Similarity=0.205 Sum_probs=183.9
Q ss_pred ccccCCcccccccccC------CCCCCcccccccccCCCCccc-hhhchhhhhhcccCCCCCceecccceeecCCCCCcE
Q 004989 24 QDSDSSRALNISGVSD------RNPRLLRGERFGVRGDDSNDF-ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPF 96 (720)
Q Consensus 24 ~~~~~~~~~~~~~~~~------~~~~~~~~~r~~~~~~~~~~~-~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~ 96 (720)
+..+.+|.+|.+-|+. +...+..+-++.+...-.... .-...||+.|-++|+||||+++|+ +|.+.. .+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~-~fhd~~---ri 97 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYG-YFHDSK---RI 97 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhh-heeccc---ee
Confidence 3456788888877775 222222222222211100000 001226666899999999999999 666665 57
Q ss_pred EEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCC
Q 004989 97 VHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD 174 (720)
Q Consensus 97 ~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~ 174 (720)
|+++|| .+|+|...|. .....+++..+..|++|++.||.|+|..+||||||||+|+|++..|.+|++|||-+.....
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~- 176 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 176 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC-
Confidence 999999 9999999994 3455699999999999999999999999999999999999999999999988776521100
Q ss_pred CcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccch
Q 004989 175 SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254 (720)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~ 254 (720)
T Consensus 177 -------------------------------------------------------------------------------- 176 (281)
T KOG0580|consen 177 -------------------------------------------------------------------------------- 176 (281)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcccc
Q 004989 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL 331 (720)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~ 331 (720)
.+....+||..|.+||...+..++..+|+|++|++.||++. ||.... ...++..|++-.+. ++
T Consensus 177 -----------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~~~--~p 242 (281)
T KOG0580|consen 177 -----------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVDLK--FP 242 (281)
T ss_pred -----------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcccc--CC
Confidence 01123689999999999999999999999999999999999 676655 45677777653221 11
Q ss_pred ccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 332 LKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 ~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+ ..+|||.+||..+|.+|.+..|++.|||+...
T Consensus 243 ~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 243 STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 3334 44599999999999999999999999998753
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=288.02 Aligned_cols=207 Identities=18% Similarity=0.191 Sum_probs=154.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .++.| +.+......+++..++.++.||+.||.|||+.||
T Consensus 47 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l-~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 121 (287)
T cd07848 47 TLRELKMLRTLKQENIVELKE-AFRRRG---KLYLVFEYVEKNML-ELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDI 121 (287)
T ss_pred HHHHHHHHHhCCCccccchhh-hEecCC---EEEEEEecCCCCHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346788999999999999999 444432 68999999 55544 4453434459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+........ .
T Consensus 122 ~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------------------------------~-------------- 156 (287)
T cd07848 122 VHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-------------------------------A-------------- 156 (287)
T ss_pred ecCCCCHHHEEEcCCCcEEEeeccCccccccccc-------------------------------c--------------
Confidence 9999999999999999999999998743211000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~ 192 (287)
T cd07848 157 --------------------------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILG 192 (287)
T ss_pred --------------------------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHH
Confidence 001136799999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHH--hhcC------------------CCCcc---------ccc-cCchHHHHHHHcCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSS--LRHR------------------VLPPQ---------LLL-KFPKEASFCLWLLHPEP 349 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~--l~~~------------------~~p~~---------~~~-~~p~~~~Li~~~L~~dP 349 (720)
||++ ||............ +... ..+.. ... ..+...+||.+||++||
T Consensus 193 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P 272 (287)
T cd07848 193 ELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNP 272 (287)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCc
Confidence 9999 66554332221111 1000 00000 000 12234599999999999
Q ss_pred CCCCChHHHHcCccc
Q 004989 350 SGRPKMGELLQSEFL 364 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~ 364 (720)
++|||++++|+||||
T Consensus 273 ~~R~s~~~~l~hp~f 287 (287)
T cd07848 273 TDRYLTEQCLNHPAF 287 (287)
T ss_pred ccCCCHHHHhcCCCC
Confidence 999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.6e-33 Score=304.66 Aligned_cols=256 Identities=15% Similarity=0.198 Sum_probs=168.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ .+.++. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||+|||++|
T Consensus 47 ~~~~E~~il~~~~h~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~~ 121 (382)
T cd05625 47 HVKAERDILAEADNEWVVRLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKMG 121 (382)
T ss_pred HHHHHHHHHHhCCCCcCCeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3346777999999999999999 555443 68999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++..+............ +. .+ ....+|.... . .
T Consensus 122 ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~-------------~~--~~--~~~~~~~~~~--~---~ 179 (382)
T cd05625 122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSG-------------DH--VR--QDSMDFSNEW--G---D 179 (382)
T ss_pred eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccc-------------cc--cc--cccccccccc--c---c
Confidence 999999999999999999999999998654221100000000 00 00 0000110000 0 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
...+. .+.. .. ....... ...........+||+.|+|||++.+..++.++|||||||++
T Consensus 180 ~~~~~-----~~~~--~~-------------~~~~~~~-~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 180 PANCR-----CGDR--LK-------------PLERRAA-RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccc-----cccc--cc-------------chhhhhc-cccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 00000 0000 00 0000000 00000011225799999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
|||++ ||............+.. ....|......+...+||.+|+ .+|.+|++ +.++++||||...
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 99999 67665544333333321 1111222234456669999987 59999987 9999999999876
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-32 Score=298.66 Aligned_cols=235 Identities=17% Similarity=0.231 Sum_probs=167.2
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+.++. .+|+|||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gii 123 (350)
T cd05573 49 RAERDILADADSPWIVKLYY-SFQDEE---HLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFI 123 (350)
T ss_pred HHHHHHHHhcCCCCccchhh-heecCC---eEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35677899999999999999 454443 68999999 899999999655 4599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++............... .+.... .
T Consensus 124 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~-------------------------~~~~~~--------~ 170 (350)
T cd05573 124 HRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLND-------------------------SHNLLF--------R 170 (350)
T ss_pred ccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccc-------------------------cccccc--------c
Confidence 9999999999999999999999998654332110000000 000000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. ...................||+.|+|||++.+..++.++|||||||++||
T Consensus 171 ~~----------------------------~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 222 (350)
T cd05573 171 DN----------------------------VLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222 (350)
T ss_pred cc----------------------------ccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhh
Confidence 00 00000000000111123579999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc---CCCCccccccCchHHHHHHHcCCCCCCCCCC-hHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~---~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt-a~eiL~hp~~~~~ 367 (720)
|++ ||....... ....+.. ....|......+...+||.+||. ||.+||+ +.++++||||...
T Consensus 223 ll~g~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 223 MLYGFPPFYSDTLQE-TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred hccCCCCCCCCCHHH-HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 999 666555432 2333332 11112222234555699999997 9999999 9999999999875
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-32 Score=293.12 Aligned_cols=229 Identities=21% Similarity=0.253 Sum_probs=169.8
Q ss_pred CCcccccccccCCCCc-cchhhchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCH
Q 004989 43 RLLRGERFGVRGDDSN-DFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 120 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~-~~~~r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~ 120 (720)
+..+.+|+++.+.+.+ -..|+ .|+..|.+|. |.+||+||+ |+-. -.++|+||||+..+|..+|++....++.
T Consensus 386 ~iyalkkv~~~~~D~qtl~gy~--nEI~lL~KLkg~~~IIqL~D--YEv~--d~~lYmvmE~Gd~DL~kiL~k~~~~~~~ 459 (677)
T KOG0596|consen 386 QIYALKKVVLLEADNQTLDGYR--NEIALLNKLKGHDKIIQLYD--YEVT--DGYLYMVMECGDIDLNKILKKKKSIDPD 459 (677)
T ss_pred cchhhhHHHHhhcCHHHHHHHH--HHHHHHHHhcCCceEEEEee--eecc--CceEEEEeecccccHHHHHHhccCCCch
Confidence 4445566555444322 23344 4555777754 899999999 4333 2368999999999999999887776776
Q ss_pred HHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhh
Q 004989 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
..++.|..|++.+|.++|.+||||.||||.|||+- .|.+||||||.|.....+..
T Consensus 460 ~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT------------------------ 514 (677)
T KOG0596|consen 460 WFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT------------------------ 514 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcccc------------------------
Confidence 79999999999999999999999999999999995 68999999998854332210
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCc
Q 004989 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.+ -....+||+.||+|
T Consensus 515 ---------------------------------------------sI-------------------~kdsQvGT~NYMsP 530 (677)
T KOG0596|consen 515 ---------------------------------------------SI-------------------VKDSQVGTVNYMSP 530 (677)
T ss_pred ---------------------------------------------ce-------------------eeccccCcccccCH
Confidence 00 01125899999999
Q ss_pred ccccCCC-----------CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcC---CCCccccccCchHHHHHHH
Q 004989 281 EELAGAP-----------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLW 343 (720)
Q Consensus 281 E~l~~~~-----------~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~---~~p~~~~~~~p~~~~Li~~ 343 (720)
|.+.... .+.++||||||||||+|+. ||........-+..|... +.-|.....++ ..++++.
T Consensus 531 EAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~-li~~mK~ 609 (677)
T KOG0596|consen 531 EALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDE-LIDVMKC 609 (677)
T ss_pred HHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchH-HHHHHHH
Confidence 9985332 5689999999999999998 666554443444444432 12222333332 5699999
Q ss_pred cCCCCCCCCCChHHHHcCcccCCC
Q 004989 344 LLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||.+||.+||++.|+|+|||++..
T Consensus 610 CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 610 CLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred HHhcCcccCCCcHHHhcCcccccc
Confidence 999999999999999999999985
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-32 Score=292.08 Aligned_cols=212 Identities=16% Similarity=0.165 Sum_probs=152.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~--------~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|++++||||+++++ ++.... ...+|++|||.+++|.+++... ...+++..++.++.||+.||+
T Consensus 45 ~~~E~~~l~~l~h~niv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~ 122 (317)
T cd07868 45 ACREIALLRELKHPNVISLQK-VFLSHA-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 122 (317)
T ss_pred HHHHHHHHHhcCCCCCcceee-eEecCC-CcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHH
Confidence 347888999999999999999 443322 2368999999888999988421 224899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEE----ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 136 AAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
|||++||+||||||+|||+ +..+.+||+|||++...+..... .
T Consensus 123 ~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~- 169 (317)
T cd07868 123 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L- 169 (317)
T ss_pred HHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc--------------------------------c-
Confidence 9999999999999999999 45678999999987433211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCc
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSC 290 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~ 290 (720)
.......||+.|+|||++.+.. ++.
T Consensus 170 ------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~ 195 (317)
T cd07868 170 ------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTK 195 (317)
T ss_pred ------------------------------------------------------cccCCccccccccCCHHHcCCCCcCc
Confidence 0001146899999999998754 899
Q ss_pred cccchhhhchhhhccc---cCCCCchH--------HHHHHHhhc----------------------------CCCCc-c-
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLRH----------------------------RVLPP-Q- 329 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~--------~~~~~~l~~----------------------------~~~p~-~- 329 (720)
++|||||||++|||++ ||...... ...+..+.. ..... .
T Consensus 196 ~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (317)
T cd07868 196 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSL 275 (317)
T ss_pred hhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccc
Confidence 9999999999999999 55432110 000000000 00000 0
Q ss_pred -------ccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 330 -------LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 330 -------~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
.....+...+||.+||++||.+|||++|+|+||||
T Consensus 276 ~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 276 IKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred cchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00011234589999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-32 Score=294.84 Aligned_cols=205 Identities=19% Similarity=0.272 Sum_probs=162.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 42 ~~~E~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 116 (323)
T cd05595 42 TVTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDV 116 (323)
T ss_pred HHHHHHHHHhCCCCCCcceee-EEecCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778999999999999999 554443 67999999 8999999885443 58999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++........
T Consensus 117 vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------- 150 (323)
T cd05595 117 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---------------------------------------------- 150 (323)
T ss_pred EecCCCHHHEEEcCCCCEEecccHHhccccCCCC----------------------------------------------
Confidence 9999999999999999999999988732100000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 151 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 186 (323)
T cd05595 151 --------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 186 (323)
T ss_pred --------------------------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHH
Confidence 000136899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--CCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+... .+|. ...+...+||.+||..||.+|| ++.++++||||...
T Consensus 187 ell~g~~Pf~~~~~~-~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 187 EMMCGRLPFYNQDHE-RLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 9999 66654433 222222221 1222 2234556999999999999998 89999999999985
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-32 Score=300.03 Aligned_cols=240 Identities=18% Similarity=0.262 Sum_probs=163.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ .+.+.. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+
T Consensus 49 ~~E~~il~~~~~~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~giv 123 (363)
T cd05628 49 RAERDILVEADSLWVVKMFY-SFQDKL---NLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQLGFI 123 (363)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEecCC---eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 35677899999999999999 555543 57999999 8999999995543 599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++............... ....+ .++.+.......
T Consensus 124 HrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~-------~~~~~------------~~~~~~~~~~~~---- 180 (363)
T cd05628 124 HRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNL-------NHSLP------------SDFTFQNMNSKR---- 180 (363)
T ss_pred ecCCCHHHeEECCCCCEEEeeccCcccccccccccccccc-------ccccc------------cccccccccccc----
Confidence 9999999999999999999999998654221100000000 00000 111000000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. +.............+||+.|+|||++.+..++.++|||||||++||
T Consensus 181 -----------------------~~---------~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~e 228 (363)
T cd05628 181 -----------------------KA---------ETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228 (363)
T ss_pred -----------------------cc---------chhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHH
Confidence 00 0000000000112579999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCC---CCCChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPS---GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~Li~~~L~~dP~---~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+... .+|+. ....+...+||.+|+. +|. .||+++||++||||...
T Consensus 229 ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 229 MLIGYPPFCSETPQ-ETYKKVMNWKETLIFPPE-VPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHcCcCcccCCCc-CCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 999 66554433 333333321 12222 2234556699998775 444 45899999999999986
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-32 Score=296.51 Aligned_cols=212 Identities=19% Similarity=0.230 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|++|||.+++|.+++.. .+++..+..++.||+.||.|||+
T Consensus 66 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~ 141 (359)
T cd07876 66 RAYRELVLLKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHS 141 (359)
T ss_pred HHHHHHHHHHhCCCCCEeeeee-eeccCCCccccceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHh
Confidence 4447888999999999999999 443332 2235799999977788887732 38899999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...... .
T Consensus 142 ~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~-----------------------------------~--------- 177 (359)
T cd07876 142 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN-----------------------------------F--------- 177 (359)
T ss_pred CCcccCCCCHHHEEECCCCCEEEecCCCccccccC-----------------------------------c---------
Confidence 99999999999999999999999999887321100 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 178 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~ 210 (359)
T cd07876 178 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 210 (359)
T ss_pred -----------------------------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHH
Confidence 001136799999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh----------------------c-CCCCcc----cc-------------ccCch
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLR----------------------H-RVLPPQ----LL-------------LKFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~----------------------~-~~~p~~----~~-------------~~~p~ 336 (720)
++|+|++ ||...+........+. . ...+.. .. ...+.
T Consensus 211 il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (359)
T cd07876 211 IMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQ 290 (359)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchh
Confidence 9999999 6654432211100000 0 000000 00 01133
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||.+||++|||+.|+|+||||.....
T Consensus 291 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 323 (359)
T cd07876 291 ARDLLSKMLVIDPDKRISVDEALRHPYITVWYD 323 (359)
T ss_pred HHHHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence 459999999999999999999999999986433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-32 Score=293.46 Aligned_cols=208 Identities=18% Similarity=0.250 Sum_probs=162.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+...|..++..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||+ .
T Consensus 41 ~~~~e~~~l~~~~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ 115 (325)
T cd05594 41 HTLTENRVLQNSRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEK 115 (325)
T ss_pred HHHHHHHHHHhCCCCCCCceEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 4456777899999999999998 555443 67999999 899999988544 359999999999999999999998 7
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++....... .
T Consensus 116 ~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------------------------~----------- 151 (325)
T cd05594 116 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------------------------A----------- 151 (325)
T ss_pred CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC---------------------------------c-----------
Confidence 99999999999999999999999999873211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 152 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 185 (325)
T cd05594 152 ----------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 185 (325)
T ss_pred ----------------------------------------------ccccccCCcccCCHHHHccCCCCCccccccccce
Confidence 0001368999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+...... ......+...+|+.+||.+||.+|+ ++.++++||||...
T Consensus 186 l~el~tG~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 186 MYEMMCGRLPFYNQDHE-KLFELILMEEIR-FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred eeeeccCCCCCCCCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 999999 66554432 233333222111 1112335566999999999999996 89999999999885
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-32 Score=308.33 Aligned_cols=211 Identities=19% Similarity=0.252 Sum_probs=166.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..+|+.++|||||++++ ++..+. .+|+|||| .|++|.++|.. ...++++.++..++.||+.||.|||+
T Consensus 112 ~~~E~~~l~~l~Hpniv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~ 187 (478)
T PTZ00267 112 ARSELHCLAACDHFGIVKHFD-DFKSDD---KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS 187 (478)
T ss_pred HHHHHHHHHhCCCCCEeEEEE-EEEECC---EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 346788999999999999999 555443 68999999 89999998842 23458999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++......... +
T Consensus 188 ~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~-------------------------------~---------- 226 (478)
T PTZ00267 188 RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL-------------------------------D---------- 226 (478)
T ss_pred CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc-------------------------------c----------
Confidence 99999999999999999999999999987432110000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..++.++|||||||
T Consensus 227 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~ 259 (478)
T PTZ00267 227 -----------------------------------------------VASSFCGTPYYLAPELWERKRYSKKADMWSLGV 259 (478)
T ss_pred -----------------------------------------------cccccCCCccccCHhHhCCCCCCcHHhHHHHHH
Confidence 001146899999999999888999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... ..+..+..+..++......+...+||.+||..||++||++.+++.|||+...
T Consensus 260 ~l~el~tg~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 260 ILYELLTLHRPFKGPSQR-EIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 9999999 66654443 3344444343333322334556799999999999999999999999998654
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-32 Score=300.87 Aligned_cols=212 Identities=17% Similarity=0.171 Sum_probs=158.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|+.+|++++|||||++++ ++.... ..+++||+.+++|.+++... ..+++.+++.|+.||+.||.|||++||||
T Consensus 131 ~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvH 205 (391)
T PHA03212 131 ATEAHILRAINHPSIIQLKG-TFTYNK---FTCLILPRYKTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIH 205 (391)
T ss_pred HHHHHHHHhCCCCCCCCEeE-EEEECC---eeEEEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 47888999999999999999 554443 57999999778999998544 34899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++....... .
T Consensus 206 rDiKP~NIll~~~~~vkL~DFG~a~~~~~~~---------------------------------~--------------- 237 (391)
T PHA03212 206 RDIKAENIFINHPGDVCLGDFGAACFPVDIN---------------------------------A--------------- 237 (391)
T ss_pred CCCChHhEEEcCCCCEEEEeCCccccccccc---------------------------------c---------------
Confidence 9999999999999999999999873210000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.......||+.|+|||++.+..++.++|||||||++|||
T Consensus 238 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 276 (391)
T PHA03212 238 -----------------------------------------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEM 276 (391)
T ss_pred -----------------------------------------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence 000114789999999999988899999999999999999
Q ss_pred cc---cCCCCch------HHHHHHHhhc--CCCCcc-----------------------------c--cccCc-hHHHHH
Q 004989 305 FC---PFSTGEE------KTRTMSSLRH--RVLPPQ-----------------------------L--LLKFP-KEASFC 341 (720)
Q Consensus 305 lt---pf~~~~~------~~~~~~~l~~--~~~p~~-----------------------------~--~~~~p-~~~~Li 341 (720)
++ ||..... ....+..+.. +..|.. + ....| ...+||
T Consensus 277 ltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li 356 (391)
T PHA03212 277 ATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLI 356 (391)
T ss_pred HHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHH
Confidence 98 3332110 0001111100 000000 0 00112 345899
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+||++||.+|||+.|+|+||||.....+
T Consensus 357 ~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 357 CKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 99999999999999999999999886443
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-32 Score=297.27 Aligned_cols=245 Identities=16% Similarity=0.215 Sum_probs=165.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++||||+++++ .+.++. .+|+|||| .|++|.+++...+ .+++..++.|+.||+.||+|||++||
T Consensus 48 ~~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~i 122 (364)
T cd05599 48 VRAERDILAEADNPWVVKLYY-SFQDEN---YLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLGY 122 (364)
T ss_pred HHHHHHHHHhCCCCCCcceEE-EEEcCC---eEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 336777999999999999999 555543 67999999 8999999995544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++.............. .....+.+. .++........
T Consensus 123 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-------~~~~~~~~~---------~~~~~~~~~~~---- 182 (364)
T cd05599 123 IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRI-------LSHALPSNF---------LDFISKPMSSK---- 182 (364)
T ss_pred EeccCCHHHeEECCCCCEEEeecccceecccccccccccc-------ccccccccc---------ccccccccccc----
Confidence 9999999999999999999999999865322110000000 000000000 00000000000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
...+.............+||+.|+|||++.+..++.++|||||||++|
T Consensus 183 --------------------------------~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 230 (364)
T cd05599 183 --------------------------------RKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMY 230 (364)
T ss_pred --------------------------------ccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHH
Confidence 000000000000001247999999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+...... +......+...+||.+||. +|.+|++ +.++++||||+..
T Consensus 231 el~~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 231 EMLVGYPPFCSDNPQ-ETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred HhhcCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 9999 66554443 233333222111 1111233455699999996 9999997 9999999999986
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-32 Score=295.22 Aligned_cols=204 Identities=16% Similarity=0.247 Sum_probs=159.7
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+ +||||+++++ ++.... .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~~l~~~~~h~~iv~~~~-~~~~~~---~~~iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~~iv 118 (320)
T cd05590 44 TEKRILSLARNHPFLTQLYC-CFQTPD---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDKGII 118 (320)
T ss_pred HHHHHHHhccCCCchhceee-EEEcCC---EEEEEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 455566554 7999999999 555443 57999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++....... .
T Consensus 119 H~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---------------------------------~-------------- 151 (320)
T cd05590 119 YRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG---------------------------------K-------------- 151 (320)
T ss_pred eCCCCHHHeEECCCCcEEEeeCCCCeecCcCC---------------------------------C--------------
Confidence 99999999999999999999999873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (320)
T cd05590 152 -------------------------------------------TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYE 188 (320)
T ss_pred -------------------------------------------cccccccCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ++. ..+...+|+.+||+.||.+||++ +++++||||...
T Consensus 189 l~~g~~Pf~~~~~~-~~~~~i~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 189 MLCGHAPFEAENED-DLFEAILNDEVV--YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred HhhCCCCCCCCCHH-HHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 999 66655443 333344332211 112 23445699999999999999998 999999999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-32 Score=300.08 Aligned_cols=251 Identities=12% Similarity=0.158 Sum_probs=166.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ .+.++. .+|+|||| .|++|.++|.+.+ .+++..++.++.||+.||+|||++||
T Consensus 48 ~~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~~i 122 (376)
T cd05598 48 VKAERDILAEADNEWVVKLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKMGF 122 (376)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778999999999999999 555443 68999999 8999999995544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||+|..+........+.. .+. .. ......
T Consensus 123 vHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~-------------------------~~~--~~--~~~~~~ 173 (376)
T cd05598 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQK-------------------------GDH--HR--QDSMEP 173 (376)
T ss_pred EeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccc-------------------------ccc--cc--cccccc
Confidence 9999999999999999999999999854421110000000 000 00 000000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........ ....... ................+||+.|+|||++.+..++.++|||||||++|
T Consensus 174 ~~~~~~~~-------------~~~~~~~-----~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 174 SEEWSEID-------------RCRLKPL-----ERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccc-------------cccccch-----hhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 00000000 0000000 00000000001112358999999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
||++ ||............... ....+......+...+||.+|+ .+|.+|+ ++.++++||||...
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 9999 67655443222222211 1111122223455569999977 5999999 99999999999875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.1e-32 Score=292.05 Aligned_cols=204 Identities=17% Similarity=0.250 Sum_probs=159.5
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. .+||||+++++ ++.... .+|+|||| .+++|..++.+. ..+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~il~~~~~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~iv 118 (321)
T cd05591 44 TEKRILALAAKHPFLTALHC-CFQTKD---RLFFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVI 118 (321)
T ss_pred HHHHHHHhccCCCCccceee-EEEcCC---eEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 45556654 48999999999 555543 57999999 899999998554 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++.......
T Consensus 119 HrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------ 150 (321)
T cd05591 119 YRDLKLDNILLDAEGHCKLADFGMCKEGILNG------------------------------------------------ 150 (321)
T ss_pred ccCCCHHHeEECCCCCEEEeecccceecccCC------------------------------------------------
Confidence 99999999999999999999999873210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.......||+.|+|||++.+..++.++|||||||++||
T Consensus 151 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (321)
T cd05591 151 ------------------------------------------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYE 188 (321)
T ss_pred ------------------------------------------ccccccccCccccCHHHHcCCCCCCccceechhHHHHH
Confidence 00011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCC-------ChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRP-------KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-------ta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... ..|. ...+...+|+.+||+.||++|| ++.++++||||...
T Consensus 189 l~tg~~Pf~~~~~~-~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 189 MMAGQPPFEADNED-DLFESILHDDVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred HhcCCCCCCCCCHH-HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 999 67655544 3333333322 1121 1224456999999999999999 89999999999764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.6e-32 Score=295.11 Aligned_cols=212 Identities=20% Similarity=0.230 Sum_probs=159.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|+||||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 69 ~~~~E~~~l~~l~h~~ii~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~ 144 (364)
T cd07875 69 RAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 144 (364)
T ss_pred HHHHHHHHHHhcCCCCccccce-eecccccccccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhh
Confidence 4447888999999999999999 443322 2235799999977789998843 38899999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...+...
T Consensus 145 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~-------------------------------------------- 180 (364)
T cd07875 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 180 (364)
T ss_pred CCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC--------------------------------------------
Confidence 999999999999999999999999999874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 181 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~ 213 (364)
T cd07875 181 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213 (364)
T ss_pred -----------------------------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHH
Confidence 001136799999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC-Ccc-------------------------------c--------cccCch
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL-PPQ-------------------------------L--------LLKFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~-p~~-------------------------------~--------~~~~p~ 336 (720)
++|||++ ||............+..... ++. . ....+.
T Consensus 214 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (364)
T cd07875 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293 (364)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHH
Confidence 9999999 67654433221111110000 000 0 001123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||+.||.+|||+.|+|+||||....+
T Consensus 294 ~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 326 (364)
T cd07875 294 ARDLLSKMLVIDASKRISVDEALQHPYINVWYD 326 (364)
T ss_pred HHHHHHHhcCcCcccCCCHHHHhcCcccccccC
Confidence 459999999999999999999999999986433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=304.14 Aligned_cols=221 Identities=19% Similarity=0.240 Sum_probs=169.9
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCC----CCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIV 131 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl 131 (720)
...+..+|..+|..++|+||+++++.+..... ....+++|||| .+++|.++|.. ....+++..+..++.||+
T Consensus 74 ~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll 153 (496)
T PTZ00283 74 DKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVL 153 (496)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence 33455678889999999999999884432221 12247899999 99999999943 234689999999999999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||.|||++||+||||||+|||++.++.+||+|||+++........ +
T Consensus 154 ~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~-------------------------------~-- 200 (496)
T PTZ00283 154 LAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD-------------------------------D-- 200 (496)
T ss_pred HHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccc-------------------------------c--
Confidence 9999999999999999999999999999999999987443211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcc
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.....+||+.|+|||++.+..++.+
T Consensus 201 -------------------------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~k 225 (496)
T PTZ00283 201 -------------------------------------------------------VGRTFCGTPYYVAPEIWRRKPYSKK 225 (496)
T ss_pred -------------------------------------------------------ccccccCCcceeCHHHhCCCCCCcH
Confidence 0011468999999999999889999
Q ss_pred ccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|||||||++|||++ ||...... ..+..+..+..++......+...+|+.+||+.||.+||++.++++|||++...
T Consensus 226 ~DVwSlGvilyeLltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 226 ADMFSLGVLLYELLTLKRPFDGENME-EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 999999999999999 67655443 33333333333333233345566999999999999999999999999988754
Q ss_pred c
Q 004989 369 D 369 (720)
Q Consensus 369 ~ 369 (720)
.
T Consensus 305 ~ 305 (496)
T PTZ00283 305 S 305 (496)
T ss_pred h
Confidence 3
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-32 Score=292.60 Aligned_cols=207 Identities=18% Similarity=0.191 Sum_probs=160.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++..+. .+++|||| .+++|.+++.... .+++..+..++.||+.||.|||++
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (331)
T cd06649 49 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKH 123 (331)
T ss_pred HHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 4557888999999999999999 444443 57999999 8999999995543 489999999999999999999986
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+|+||||||+|||++.++.++|+|||++......
T Consensus 124 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 157 (331)
T cd06649 124 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 157 (331)
T ss_pred CEEcCCCChhhEEEcCCCcEEEccCccccccccc----------------------------------------------
Confidence 6999999999999999999999998877322100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i 191 (331)
T cd06649 158 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191 (331)
T ss_pred ----------------------------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHH
Confidence 0001367999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhh----------------------------------------------cCCCCcccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLR----------------------------------------------HRVLPPQLL 331 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~----------------------------------------------~~~~p~~~~ 331 (720)
+|||++ ||...... .....+. ....+....
T Consensus 192 l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T cd06649 192 LVELAIGRYPIPPPDAK-ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPN 270 (331)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCC
Confidence 999999 66543221 1111111 111111111
Q ss_pred -ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 332 -LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 -~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...++..+||.+||.+||++|||+.+||+||||+..
T Consensus 271 ~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 271 GVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred ccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 123455699999999999999999999999999865
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-32 Score=295.25 Aligned_cols=212 Identities=15% Similarity=0.203 Sum_probs=159.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++++.... .....+|++||+.+++|.+++.. ..+++..++.++.||+.||.|||++
T Consensus 60 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~ 137 (343)
T cd07878 60 RTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSA 137 (343)
T ss_pred HHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447888999999999999999433221 22245799999999999998853 2499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++......
T Consensus 138 ~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 171 (343)
T cd07878 138 GIIHRDLKPSNVAVNEDCELRILDFGLARQADDE---------------------------------------------- 171 (343)
T ss_pred CeecccCChhhEEECCCCCEEEcCCccceecCCC----------------------------------------------
Confidence 9999999999999999999999988877321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
....+||++|+|||++.+ ..++.++|||||||
T Consensus 172 -----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 204 (343)
T cd07878 172 -----------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 204 (343)
T ss_pred -----------------------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHH
Confidence 001367999999999977 45899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc--CCC-----------------------Cc-----cccccCchHHHHHHHcCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRH--RVL-----------------------PP-----QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~--~~~-----------------------p~-----~~~~~~p~~~~Li~~~L~ 346 (720)
++|+|++ ||........ ...+.. +.. +. .+....+...+|+.+||+
T Consensus 205 il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 283 (343)
T cd07878 205 IMAELLKGKALFPGNDYIDQ-LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLV 283 (343)
T ss_pred HHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcC
Confidence 9999999 5654332211 111110 000 00 011122344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||.+|||+.|+|+||||.....+
T Consensus 284 ~dp~~R~s~~ell~hp~~~~~~~~ 307 (343)
T cd07878 284 LDSDKRISASEALAHPYFSQYHDP 307 (343)
T ss_pred CChhhCCCHHHHhcCcchhccCCC
Confidence 999999999999999999886443
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-32 Score=299.33 Aligned_cols=255 Identities=13% Similarity=0.140 Sum_probs=165.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++..++.++.||+.||+|||++|
T Consensus 47 ~~~~E~~il~~l~hp~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~g 121 (377)
T cd05629 47 HVKAERDVLAESDSPWVVSLYY-SFQDAQ---YLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLG 121 (377)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEEcCC---eeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3346777899999999999999 555543 67999999 899999999554 45899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++..+............ .......+. .+ ...+...
T Consensus 122 ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~-~~~~~~~~~--~~----------~~~~~~~------- 181 (377)
T cd05629 122 FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKL-LQGKSNKNR--ID----------NRNSVAV------- 181 (377)
T ss_pred eeccCCCHHHEEECCCCCEEEeeccccccccccccccccccc-ccccccccc--cc----------ccccccc-------
Confidence 999999999999999999999999998643221100000000 000000000 00 0000000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
...+ .... ......+.+ ..........+||+.|+|||++.+..++.++|||||||++
T Consensus 182 ~~~~----~~~~---------~~~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 182 DSIN----LTMS---------SKDQIATWK----------KNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccc----cccc---------chhhhhhhh----------hcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 0000 0000 000000000 0000011125799999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC---CCccccccCchHHHHHHHcCCCCCCCC---CChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRV---LPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~---~p~~~~~~~p~~~~Li~~~L~~dP~~R---pta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+.... ..|......+...+||.+||. +|.+| +++.|+++||||...
T Consensus 239 ~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 239 FECLIGWPPFCSENSH-ETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred hhhhcCCCCCCCCCHH-HHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 99999 66554433 2333332211 111111233556699999997 77765 599999999999875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-32 Score=292.55 Aligned_cols=210 Identities=16% Similarity=0.184 Sum_probs=162.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...+|..++..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+....+++..++.++.||+.||.|||++|
T Consensus 47 ~~~~e~~i~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ 122 (330)
T cd05601 47 FFEEERDILSISNSPWIPQLQY-AFQDKD---NLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG 122 (330)
T ss_pred HHHHHHHHHHhCCCCCCcceee-EEecCC---eEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446677888999999999998 555443 57999999 899999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 123 i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-------------------------------------------- 158 (330)
T cd05601 123 YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-------------------------------------------- 158 (330)
T ss_pred eEcccCchHheEECCCCCEEeccCCCCeECCCCCce--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc------CCCCCccccch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIY 295 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~------~~~~s~~sDIw 295 (720)
......||+.|+|||++. +..++.++|||
T Consensus 159 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw 193 (330)
T cd05601 159 ---------------------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWW 193 (330)
T ss_pred ---------------------------------------------eeecccCCccccCHHHhccccccccCCCCCcceee
Confidence 001136899999999986 44578999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCCC---CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~---p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|||++ ||...... ..+..+..... .+......+...+|+.+||. +|.+|||+.++++||||...
T Consensus 194 slG~il~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 194 SLGVIAYEMIYGRSPFHEGTSA-KTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred cccceeeeeccCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 99999999999 66654443 23333332211 11112233455699999998 99999999999999999875
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-32 Score=296.11 Aligned_cols=214 Identities=19% Similarity=0.218 Sum_probs=159.7
Q ss_pred hhchhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+..+|..++..++||||+++++.+.... .....+|++|||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 61 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~ 137 (355)
T cd07874 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 137 (355)
T ss_pred HHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHh
Confidence 34557888999999999999999433222 12235799999977788888843 38899999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+...
T Consensus 138 ~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------- 173 (355)
T cd07874 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 173 (355)
T ss_pred CCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 174 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~ 206 (355)
T cd07874 174 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206 (355)
T ss_pred -----------------------------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHH
Confidence 001136799999999999888999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc----------------------C------CCCccc-----------cc-cCch
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRH----------------------R------VLPPQL-----------LL-KFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~----------------------~------~~p~~~-----------~~-~~p~ 336 (720)
++|+|++ ||............+.. . .++..+ .. ....
T Consensus 207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
T cd07874 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 286 (355)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchH
Confidence 9999999 66554322111111100 0 000000 00 1123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||.+||++|||+.|+|+||||....+
T Consensus 287 ~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~ 319 (355)
T cd07874 287 ARDLLSKMLVIDPAKRISVDEALQHPYINVWYD 319 (355)
T ss_pred HHHHHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence 459999999999999999999999999986544
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=283.24 Aligned_cols=204 Identities=20% Similarity=0.257 Sum_probs=150.5
Q ss_pred hcccCCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 70 ELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.|.+++||||+++++.+... ......++++|||..++|.+++.. ....+++.+++.++.||+.||.|||++||+||||
T Consensus 55 ~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di 134 (288)
T cd07863 55 RLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 134 (288)
T ss_pred HhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 34556899999999943322 223446899999966799999854 3345899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.+||+|||++.......
T Consensus 135 kp~Nili~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------- 162 (288)
T cd07863 135 KPENILVTSGGQVKLADFGLARIYSCQM---------------------------------------------------- 162 (288)
T ss_pred CHHHEEECCCCCEEECccCccccccCcc----------------------------------------------------
Confidence 9999999999999999988773321100
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 163 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g 203 (288)
T cd07863 163 ---------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 203 (288)
T ss_pred ---------------------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhC
Confidence 0011357899999999998889999999999999999998
Q ss_pred --cCCCCchHHHHHHHhhc-----------------CCCCc-------cccccCc-hHHHHHHHcCCCCCCCCCChHHHH
Q 004989 307 --PFSTGEEKTRTMSSLRH-----------------RVLPP-------QLLLKFP-KEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~-----------------~~~p~-------~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
||............+.. ..+.+ ......+ ...+|+.+||++||.+|||+.|++
T Consensus 204 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 204 KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred CcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 44433322111111110 00000 0111222 335999999999999999999999
Q ss_pred cCccc
Q 004989 360 QSEFL 364 (720)
Q Consensus 360 ~hp~~ 364 (720)
.||||
T Consensus 284 ~hp~f 288 (288)
T cd07863 284 QHPFF 288 (288)
T ss_pred cCCCC
Confidence 99998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-32 Score=303.94 Aligned_cols=214 Identities=14% Similarity=0.199 Sum_probs=157.7
Q ss_pred hhhhhhcccCCCCCceecccceeec----CCCCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~----~~~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..+|..++|||||++++.++.. ......+++||||.+++|.+++. .....+++..++.++.||+.||.||
T Consensus 107 ~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL 186 (440)
T PTZ00036 107 NRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI 186 (440)
T ss_pred HHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3688899999999999998844322 12223578999997778988873 2445699999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
|++||+||||||+|||++.++ .+||+|||+++......
T Consensus 187 H~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~----------------------------------------- 225 (440)
T PTZ00036 187 HSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ----------------------------------------- 225 (440)
T ss_pred HHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC-----------------------------------------
Confidence 999999999999999998665 69999988874321000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccch
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIw 295 (720)
......||+.|+|||++.+. .|+.++|||
T Consensus 226 --------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 255 (440)
T PTZ00036 226 --------------------------------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLW 255 (440)
T ss_pred --------------------------------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHH
Confidence 00114679999999998765 489999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcC------------------CCCc----c----ccccC-chHHHHHHHcC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHR------------------VLPP----Q----LLLKF-PKEASFCLWLL 345 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~------------------~~p~----~----~~~~~-p~~~~Li~~~L 345 (720)
||||++|||++ ||.+..........+... .+|. . ++... ++..+||.+||
T Consensus 256 SlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L 335 (440)
T PTZ00036 256 SLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFL 335 (440)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHC
Confidence 99999999999 555443322222111100 0111 0 11122 34459999999
Q ss_pred CCCCCCCCChHHHHcCcccCCCcc
Q 004989 346 HPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.+||.+|||+.|+|+||||....+
T Consensus 336 ~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 336 KYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred CCChhHCcCHHHHhCChhHHhhhc
Confidence 999999999999999999987643
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-32 Score=296.26 Aligned_cols=206 Identities=16% Similarity=0.211 Sum_probs=160.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++.+++||||+++++ ++.++. .+|+|||| .|++|.+++... .+++..+..++.||+.||.|||++||+|
T Consensus 92 ~e~~il~~~~h~~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH 165 (370)
T cd05596 92 EERDIMAHANSEWIVQLHY-AFQDDK---YLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIH 165 (370)
T ss_pred HHHHHHHhCCCCCcceEEE-EEecCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5677899999999999998 555543 68999999 899999998543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||.+........ .
T Consensus 166 rDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~---------------------------------~-------------- 198 (370)
T cd05596 166 RDVKPDNMLLDKSGHLKLADFGTCMKMDANGM---------------------------------V-------------- 198 (370)
T ss_pred cCCCHHHEEEcCCCCEEEEeccceeeccCCCc---------------------------------c--------------
Confidence 99999999999999999999998743211100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC----CCCccccchhhhch
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+. .++.++|||||||+
T Consensus 199 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvi 236 (370)
T cd05596 199 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (370)
T ss_pred ------------------------------------------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHH
Confidence 00114689999999998654 37899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+...... +......+...+||.+||..+|.+ |+++.++++||||+..
T Consensus 237 lyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 237 LYEMLVGDTPFYADSLV-GTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHHhCCCCcCCCCHH-HHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 999999 66654443 333444332211 111122344559999999999987 9999999999999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-32 Score=295.26 Aligned_cols=206 Identities=18% Similarity=0.200 Sum_probs=156.1
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..+|.+++||||+++++ ++.... ..++|||+..++|.+++......+++.+++.|+.||+.||.|||++|||||
T Consensus 106 ~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr 181 (357)
T PHA03209 106 IEAMLLQNVNHPSVIRMKD-TLVSGA---ITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHR 181 (357)
T ss_pred HHHHHHHhCCCCCCcChhh-eEEeCC---eeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 5788999999999999999 444443 578999997789999996666679999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccc
Q 004989 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+|||++.++.++|+|||.+.......
T Consensus 182 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------------------------------------------------- 211 (357)
T PHA03209 182 DVKTENIFINDVDQVCIGDLGAAQFPVVAP-------------------------------------------------- 211 (357)
T ss_pred CCCHHHEEECCCCCEEEecCccccccccCc--------------------------------------------------
Confidence 999999999999999999998873210000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhcc
Q 004989 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 212 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 212 -----------------------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred -----------------------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHH
Confidence 000135799999999999888999999999999999999
Q ss_pred c----cCCCCchH---------HHHHHHhhc-CCCCcccc-------------------------------ccCchHHHH
Q 004989 306 C----PFSTGEEK---------TRTMSSLRH-RVLPPQLL-------------------------------LKFPKEASF 340 (720)
Q Consensus 306 t----pf~~~~~~---------~~~~~~l~~-~~~p~~~~-------------------------------~~~p~~~~L 340 (720)
+ +|...... ......+.. +..|..+. .......+|
T Consensus 251 ~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 330 (357)
T PHA03209 251 AYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFL 330 (357)
T ss_pred HcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHH
Confidence 7 22221100 011111111 11111111 011223479
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 341 CLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|.+||++||.+|||+.|+|+||||+.
T Consensus 331 i~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 331 VHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHHHcCCcccCcCHHHHhcCchhcc
Confidence 99999999999999999999999985
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-32 Score=290.82 Aligned_cols=207 Identities=17% Similarity=0.257 Sum_probs=158.6
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++..+ +||||+++++ ++.+.. .+|++||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||
T Consensus 43 ~~e~~il~~~~~hp~Iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i 117 (329)
T cd05588 43 QTEKHVFETASNHPFLVGLHS-CFQTES---RLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGI 117 (329)
T ss_pred HHHHHHHHhccCCCCCCceEE-EEEcCC---EEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3566677776 7999999999 555543 67999999 899999998544 359999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...-.. .+
T Consensus 118 vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---------------------------------~~------------- 151 (329)
T cd05588 118 IYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP---------------------------------GD------------- 151 (329)
T ss_pred EecCCCHHHeEECCCCCEEECcCccccccccC---------------------------------CC-------------
Confidence 99999999999999999999999887321000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 152 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~ 187 (329)
T cd05588 152 --------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 187 (329)
T ss_pred --------------------------------------------ccccccCCccccCHHHHcCCCCCCccceechHHHHH
Confidence 001146899999999999988999999999999999
Q ss_pred hccc---cCCCC--------chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC------hHHHHcCcccC
Q 004989 303 ELFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLN 365 (720)
Q Consensus 303 eLlt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt------a~eiL~hp~~~ 365 (720)
||++ ||... .........+.....+ ......+...+||.+||.+||.+||+ +.++++||||.
T Consensus 188 el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~ 266 (329)
T cd05588 188 EMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR-IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266 (329)
T ss_pred HHHHCCCCcccccccccccccchHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence 9999 66421 1111122223322211 11122345569999999999999987 78999999997
Q ss_pred CC
Q 004989 366 EP 367 (720)
Q Consensus 366 ~~ 367 (720)
..
T Consensus 267 ~~ 268 (329)
T cd05588 267 NI 268 (329)
T ss_pred CC
Confidence 64
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=289.01 Aligned_cols=232 Identities=19% Similarity=0.228 Sum_probs=176.3
Q ss_pred cccccccccC-----CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-C
Q 004989 30 RALNISGVSD-----RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-G 103 (720)
Q Consensus 30 ~~~~~~~~~~-----~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ 103 (720)
|.+|.+-|+. ++.....+.+....|.-+. ..|. +|+.+|.+|+|+|||++|+ ++..+. .+|||||| .
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~-~~f~--~Ea~iMk~L~H~~lV~l~g-V~~~~~---piyIVtE~m~ 284 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSP-EAFL--REAQIMKKLRHEKLVKLYG-VCTKQE---PIYIVTEYMP 284 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEeccccCh-hHHH--HHHHHHHhCcccCeEEEEE-EEecCC---ceEEEEEecc
Confidence 3455555544 5555444444444443332 2233 7888999999999999999 554443 68999999 9
Q ss_pred CCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccccc
Q 004989 104 DVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNT 182 (720)
Q Consensus 104 ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~ 182 (720)
.|+|.+||+. .+..++..+.+.++.||++|++||+++++|||||...|||++.++.+||+|||+++..+.+...
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~----- 359 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT----- 359 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCcee-----
Confidence 9999999965 5666999999999999999999999999999999999999999999999999988643322111
Q ss_pred ccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccC
Q 004989 183 QNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQ 262 (720)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~ 262 (720)
.....
T Consensus 360 ---------------------------------------------------------------------------~~~~~ 364 (468)
T KOG0197|consen 360 ---------------------------------------------------------------------------ASEGG 364 (468)
T ss_pred ---------------------------------------------------------------------------ecCCC
Confidence 00011
Q ss_pred CCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH
Q 004989 263 PFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA 338 (720)
Q Consensus 263 ~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~ 338 (720)
.+ ...|.|||.+....++.+||||||||+||||+| ||+..... +....+..+..-|.... +|...
T Consensus 365 kf---------PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-ev~~~le~GyRlp~P~~-CP~~v 433 (468)
T KOG0197|consen 365 KF---------PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-EVLELLERGYRLPRPEG-CPDEV 433 (468)
T ss_pred CC---------CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-HHHHHHhccCcCCCCCC-CCHHH
Confidence 22 235899999999999999999999999999999 66655444 66777776655555433 55554
Q ss_pred -HHHHHcCCCCCCCCCChHHHH
Q 004989 339 -SFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 339 -~Li~~~L~~dP~~Rpta~eiL 359 (720)
+++..||+.+|++|||.+.+.
T Consensus 434 Y~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 434 YELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHHHHhhCCcccCCCHHHHH
Confidence 999999999999999998554
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-32 Score=294.16 Aligned_cols=241 Identities=16% Similarity=0.232 Sum_probs=165.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++.+++||||+++++ .+.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 48 ~~~e~~~l~~l~~~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~~gi 122 (360)
T cd05627 48 IRAERDILVEADGAWVVKMFY-SFQDKR---NLYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQLGF 122 (360)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 335667889999999999999 555543 67999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++............... ....+ .++.+.......
T Consensus 123 vHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~-------~~~~~------------~~~~~~~~~~~~--- 180 (360)
T cd05627 123 IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNL-------THNPP------------SDFSFQNMNSKR--- 180 (360)
T ss_pred EccCCCHHHEEECCCCCEEEeeccCCccccccccccccccc-------ccCCc------------cccccccccccc---
Confidence 99999999999999999999999998654221100000000 00000 011000000000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
..+.............+||+.|+|||++.+..++.++|||||||++|
T Consensus 181 ---------------------------------~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvily 227 (360)
T cd05627 181 ---------------------------------KAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227 (360)
T ss_pred ---------------------------------ccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceee
Confidence 00000000000011257999999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+... .+|+. ....+...+||.+|+. ||.+|+ ++.++++||||...
T Consensus 228 el~tG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 228 EMLIGYPPFCSETPQ-ETYRKVMNWKETLVFPPE-VPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred ecccCCCCCCCCCHH-HHHHHHHcCCCceecCCC-CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 9999 66554443 333333321 12221 1233455699999874 999998 58999999999986
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-31 Score=294.86 Aligned_cols=206 Identities=17% Similarity=0.223 Sum_probs=158.2
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+++.++||||+++++ ++.++. .+|+|||| .|++|.+++... .+++..++.++.||+.||.|||++||+|
T Consensus 92 ~e~~i~~~~~hp~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvH 165 (370)
T cd05621 92 EERDIMAFANSPWVVQLFC-AFQDDK---YLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIH 165 (370)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 5677899999999999999 555543 68999999 899999999543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........ .
T Consensus 166 rDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~---------------------------------~-------------- 198 (370)
T cd05621 166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGM---------------------------------V-------------- 198 (370)
T ss_pred cCCCHHHEEECCCCCEEEEecccceecccCCc---------------------------------e--------------
Confidence 99999999999999999999998743211100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----CCccccchhhhch
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+.. ++.++|||||||+
T Consensus 199 ------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~i 236 (370)
T cd05621 199 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (370)
T ss_pred ------------------------------------------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHH
Confidence 001146899999999997643 7899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+...... |......+...+|+.+||..+|.+ |+++.|+++||||+..
T Consensus 237 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 237 LFEMLVGDTPFYADSLV-GTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 999999 67655443 233333322111 111122344559999999865543 8999999999999874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=288.28 Aligned_cols=207 Identities=18% Similarity=0.253 Sum_probs=163.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+|..++||||+++++ ++..+. .+|++||| .|++|.+++.+.+ .+++..+..++.||+.||.|||++||
T Consensus 47 ~~~E~~il~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 47 TKAERNILEAVKHPFIVDLIY-AFQTGG---KLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred HHHHHHHHHhCCCCchhceee-EEecCC---eEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777999999999999999 554443 57999999 8999999995544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++....... .
T Consensus 122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------- 155 (323)
T cd05584 122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---------------------------------T------------- 155 (323)
T ss_pred ecCCCCHHHeEECCCCCEEEeeCcCCeecccCC---------------------------------C-------------
Confidence 999999999999999999999999873210000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 191 (323)
T cd05584 156 --------------------------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMY 191 (323)
T ss_pred --------------------------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHH
Confidence 001146899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+.....+ ......+...+||.+||+++|++|| ++.++++||||...
T Consensus 192 ell~G~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 192 DMLTGAPPFTAENRK-KTIDKILKGKLN-LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999 66654443 333333332221 1112234556999999999999999 89999999999875
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=288.91 Aligned_cols=201 Identities=18% Similarity=0.209 Sum_probs=157.8
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++..++||||+++++ .+.... .+|+|||| .|++|..++.+. ..+++..++.++.||+.||.|||++||+|||||
T Consensus 49 ~~~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dik 123 (323)
T cd05575 49 LLKNVKHPFLVGLHY-SFQTAD---KLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLK 123 (323)
T ss_pred HHhhCCCCCCCCeeE-EEEeCC---EEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence 567899999999998 554443 67999999 899999999554 358999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccC
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.+||+|||++....... +
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------------- 151 (323)
T cd05575 124 PENILLDSQGHVVLTDFGLCKEGIEHS---------------------------------K------------------- 151 (323)
T ss_pred HHHeEECCCCcEEEeccCCCcccccCC---------------------------------C-------------------
Confidence 999999999999999998873210000 0
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc--
Q 004989 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~ 193 (323)
T cd05575 152 --------------------------------------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGL 193 (323)
T ss_pred --------------------------------------ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCC
Confidence 0011468999999999999889999999999999999999
Q ss_pred -cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004989 307 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...... ..+..+...... ......+...+||.+||+.||.+||++ .++++||||...
T Consensus 194 ~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 194 PPFYSRDTA-EMYDNILNKPLR-LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 66654433 333333332211 111223455699999999999999987 699999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=289.12 Aligned_cols=209 Identities=19% Similarity=0.225 Sum_probs=159.5
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+|.++ +||||+++++ ++.... .+|++||| .|++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 50 ~~~~e~~~l~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~ 124 (332)
T cd05614 50 HTRTERNVLEHVRQSPFLVTLHY-AFQTEA---KLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKL 124 (332)
T ss_pred HHHHHHHHHHhccCCCCcccEEE-EEecCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 344677788888 5999999998 554443 57999999 8999999995543 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++..+......
T Consensus 125 ~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~------------------------------------------- 161 (332)
T cd05614 125 GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE------------------------------------------- 161 (332)
T ss_pred CcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCC-------------------------------------------
Confidence 9999999999999999999999999987432111000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+.. ++.++|||||||
T Consensus 162 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 195 (332)
T cd05614 162 ----------------------------------------------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGI 195 (332)
T ss_pred ----------------------------------------------ccccccCCccccCHHHhcCCCCCCCccccccchh
Confidence 000146899999999998764 789999999999
Q ss_pred hhhhccc---cCCCCc---hHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
++|||++ ||.... ........+... .+.+... .+...+|+.+||+.||++|| ++.++++||||+..
T Consensus 196 il~elltg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 196 LIFELLTGASPFTLEGERNTQSEVSRRILKC--DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred hhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999999 664321 112222222221 1222223 34455999999999999999 78899999999875
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=283.60 Aligned_cols=203 Identities=17% Similarity=0.129 Sum_probs=158.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..+|.+++|||||++++.+.........++++||| .|++|.+++.+. ..+++.....++.|++.||.|||+ .
T Consensus 64 ~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~ 142 (283)
T PHA02988 64 ITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYT 142 (283)
T ss_pred HHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcC
Confidence 4447888999999999999999433322333468999999 999999999554 358999999999999999999998 5
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+++||||||+|||++.++.+|++|||++...... .
T Consensus 143 ~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----------------------------------~----------- 177 (283)
T PHA02988 143 NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----------------------------------P----------- 177 (283)
T ss_pred CCCCCcCChhhEEECCCCcEEEcccchHhhhccc----------------------------------c-----------
Confidence 9999999999999999999999988877321100 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC--CCCCccccchhhh
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLG 298 (720)
...+||+.|+|||++.+ ..++.++||||||
T Consensus 178 ------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlG 209 (283)
T PHA02988 178 ------------------------------------------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLG 209 (283)
T ss_pred ------------------------------------------------ccccCcccccCHHHhhhccccccchhhhhHHH
Confidence 01357889999999976 5699999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||...... .....+......+.++ ...+...+|+.+||+.||++|||+.|+++
T Consensus 210 vil~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 210 VVLWEIFTGKIPFENLTTK-EIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 99999999 77765443 3333333222223333 33344569999999999999999999985
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=287.54 Aligned_cols=204 Identities=18% Similarity=0.275 Sum_probs=158.3
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. ++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++..+..++.||+.||+|||++||+
T Consensus 44 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iv 118 (316)
T cd05620 44 VEKRVLALAWENPFLTHLYC-TFQTKE---HLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGII 118 (316)
T ss_pred HHHHHHHhccCCCCccCeeE-EEEeCC---EEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 34445543 58999999999 555443 68999999 899999999554 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++...... +-
T Consensus 119 HrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------- 151 (316)
T cd05620 119 YRDLKLDNVMLDRDGHIKIADFGMCKENVFG----------------------------------DN------------- 151 (316)
T ss_pred ecCCCHHHeEECCCCCEEeCccCCCeecccC----------------------------------CC-------------
Confidence 9999999999999999999999887321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 188 (316)
T cd05620 152 -------------------------------------------RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYE 188 (316)
T ss_pred -------------------------------------------ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh-HHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta-~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... +.++. ..++..+|+.+||+.||.+||++ +++++||||...
T Consensus 189 l~~g~~Pf~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 189 MLIGQSPFHGDDED-ELFESIRVDT--PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCC--CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 999 66654432 3333333221 11122 33455699999999999999997 589999999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=289.35 Aligned_cols=206 Identities=17% Similarity=0.226 Sum_probs=157.0
Q ss_pred hhhhhcccC---CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 66 SDGVELTHG---DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 66 ~e~~~L~~l---~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.|..++... +||||+++++ .+.... .+|+|||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 42 ~e~~~l~~~~~~~~p~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~~ 116 (330)
T cd05586 42 GERNILVRTLLDESPFIVGLKF-SFQTDS---DLYLVTDYMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKYD 116 (330)
T ss_pred HHHHHHHHhccCCCCcCcceEE-EEecCC---eEEEEEcCCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 344444443 7999999999 555443 57999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++....... .
T Consensus 117 ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------------------------~------------ 151 (330)
T cd05586 117 IVYRDLKPENILLDATGHIALCDFGLSKANLTDN---------------------------------K------------ 151 (330)
T ss_pred eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC---------------------------------C------------
Confidence 9999999999999999999999999873211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+.. ++.++|||||||+
T Consensus 152 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvi 186 (330)
T cd05586 152 ---------------------------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVL 186 (330)
T ss_pred ---------------------------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccE
Confidence 001146899999999997654 8999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC----ChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+.............+...+|+.+||.+||.+|| ++.++++||||...
T Consensus 187 l~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 187 VFEMCCGWSPFYAEDTQ-QMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred EEEeccCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 999999 66554333 33444433322111111234556999999999999998 78999999999875
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=287.76 Aligned_cols=207 Identities=18% Similarity=0.248 Sum_probs=163.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..+|.+++||||+++++ ++..+. .+|+|||| .+++|.+++.+.. .+++.+++.++.||+.||.|||++|
T Consensus 44 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ 118 (318)
T cd05582 44 RTKMERDILAEVNHPFIVKLHY-AFQTEG---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLG 118 (318)
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457788999999999999999 554443 67999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++........
T Consensus 119 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--------------------------------------------- 153 (318)
T cd05582 119 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--------------------------------------------- 153 (318)
T ss_pred EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC---------------------------------------------
Confidence 99999999999999999999999988732210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 154 ---------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il 188 (318)
T cd05582 154 ---------------------------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 188 (318)
T ss_pred ---------------------------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEe
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+...... ++. ..+...+||.+||++||.+||+ +.+++.||||...
T Consensus 189 ~el~tg~~p~~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 189 FEMLTGSLPFQGKDRK-ETMTMILKAKLG--MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred eeeccCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 99999 66654433 333333322211 112 2344569999999999999999 6779999999875
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=288.89 Aligned_cols=206 Identities=18% Similarity=0.270 Sum_probs=156.5
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.++ +||||+++++ ++.... .+|+|||| .+++|..++... ..+++..++.++.||+.||.|||++||+
T Consensus 44 ~E~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iv 118 (329)
T cd05618 44 TEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGII 118 (329)
T ss_pred HHHHHHHhcCCCCcCCceee-EEEeCC---EEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 555566554 8999999999 555543 67999999 899999988544 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...-... +
T Consensus 119 H~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---------------------------------~-------------- 151 (329)
T cd05618 119 YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D-------------- 151 (329)
T ss_pred eCCCCHHHEEECCCCCEEEeeCCccccccCCC---------------------------------C--------------
Confidence 99999999999999999999999873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (329)
T cd05618 152 -------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 188 (329)
T ss_pred -------------------------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCC--------chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC------hHHHHcCcccCC
Q 004989 304 LFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNE 366 (720)
Q Consensus 304 Llt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt------a~eiL~hp~~~~ 366 (720)
|++ ||... .........+..... .......+...+||.+||+.||.+||+ +.++++||||..
T Consensus 189 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 189 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred HhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 999 66311 111112222222211 111123345569999999999999998 479999999987
Q ss_pred C
Q 004989 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 268 ~ 268 (329)
T cd05618 268 V 268 (329)
T ss_pred C
Confidence 5
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=286.87 Aligned_cols=203 Identities=17% Similarity=0.262 Sum_probs=157.3
Q ss_pred hhhhcc-cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 67 DGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 67 e~~~L~-~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
|..++. ..+||||+++++ ++..+. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+|
T Consensus 45 e~~~l~~~~~hp~i~~~~~-~~~~~~---~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivH 119 (316)
T cd05592 45 ERRVLALAWEHPFLTHLFC-TFQTKE---HLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKKGIIY 119 (316)
T ss_pred HHHHHHhccCCCCccceee-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 333444 468999999999 554443 68999999 8999999995544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++.......
T Consensus 120 ~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~------------------------------------------------- 150 (316)
T cd05592 120 RDLKLDNVLLDKDGHIKIADFGMCKENMNGE------------------------------------------------- 150 (316)
T ss_pred CCCCHHHeEECCCCCEEEccCcCCeECCCCC-------------------------------------------------
Confidence 9999999999999999999998873210000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 151 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (316)
T cd05592 151 -----------------------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEM 189 (316)
T ss_pred -----------------------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHH
Confidence 000114689999999999988899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh-HHHHcCcccCCC
Q 004989 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta-~eiL~hp~~~~~ 367 (720)
++ ||...... .....+.... +.++... +...+|+.+||+.||.+||++ .++++||||...
T Consensus 190 l~G~~Pf~~~~~~-~~~~~i~~~~--~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 190 LIGQSPFHGEDED-ELFDSILNDR--PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred HhCCCCCCCCCHH-HHHHHHHcCC--CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 99 67655443 3333333221 1222223 345599999999999999986 588899999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=282.27 Aligned_cols=207 Identities=17% Similarity=0.201 Sum_probs=160.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..|..+|..++||||+++++ ++.... .+|++||| .|++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 41 ~~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 116 (280)
T cd05608 41 MVEKRILAKVHSRFIVSLAY-AFQTKT---DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR 116 (280)
T ss_pred HHHHHHHHhCCCCcEeeeeE-EEcCCC---eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 46778999999999999998 554443 57999999 89999988732 334589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+........
T Consensus 117 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------- 152 (280)
T cd05608 117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-------------------------------------------- 152 (280)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--------------------------------------------
Confidence 999999999999999999999999998743211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||.+.+..++.++|||||||+
T Consensus 153 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~i 186 (280)
T cd05608 153 ----------------------------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVT 186 (280)
T ss_pred ----------------------------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHH
Confidence 0001367999999999999889999999999999
Q ss_pred hhhccc---cCCCCchH---HHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ......+... +..+....+ ...+|+.+||+.||++|| +++++++||||+..
T Consensus 187 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 187 LYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred HHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 999999 66543221 1111111111 112222333 445999999999999999 88999999999885
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=279.82 Aligned_cols=207 Identities=16% Similarity=0.195 Sum_probs=159.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ .++.+. .+|++||| .|++|.+++.. ....+++..+..++.||+.||.|||+.||+
T Consensus 42 ~E~~il~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 117 (277)
T cd05607 42 LEKEILEKVNSPFIVNLAY-AFESKT---HLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIV 117 (277)
T ss_pred HHHHHHHhcCCCcEEEEEE-EEecCC---eEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 4777899999999999998 555443 67999999 89999998843 334589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.......
T Consensus 118 H~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------ 149 (277)
T cd05607 118 YRDMKPENVLLDDQGNCRLSDLGLAVELKDGK------------------------------------------------ 149 (277)
T ss_pred EccCChHhEEEcCCCCEEEeeceeeeecCCCc------------------------------------------------
Confidence 99999999999999999999998873221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 150 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~e 186 (277)
T cd05607 150 -------------------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYE 186 (277)
T ss_pred -------------------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHH
Confidence 0001357899999999998889999999999999999
Q ss_pred ccc---cCCCCchH---HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
|++ ||...... ............+.......+...+|+.+||.+||.+||++ .+++.||||+..
T Consensus 187 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 187 MVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred HHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 999 66543221 12222222222221112233455699999999999999999 677899999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=287.06 Aligned_cols=204 Identities=20% Similarity=0.270 Sum_probs=158.6
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. ++||||+++++ ++.+.. .+|++||| .|++|.+++... ..+++.++..++.||+.||.|||++||+
T Consensus 44 ~e~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~iv 118 (316)
T cd05619 44 VEKRVLSLAWEHPFLTHLYC-TFQTKE---NLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIV 118 (316)
T ss_pred HHHHHHHhccCCCcCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 44455554 69999999999 554443 58999999 899999999554 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++...... +-
T Consensus 119 Hrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------- 151 (316)
T cd05619 119 YRDLKLDNILLDTDGHIKIADFGMCKENMLG----------------------------------DA------------- 151 (316)
T ss_pred eCCCCHHHEEECCCCCEEEccCCcceECCCC----------------------------------CC-------------
Confidence 9999999999999999999999887321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (316)
T cd05619 152 -------------------------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYE 188 (316)
T ss_pred -------------------------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... +.++. ...+..+|+.+||+.||.+||++. ++++||||...
T Consensus 189 l~~G~~pf~~~~~~-~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 189 MLIGQSPFHGHDEE-ELFQSIRMDN--PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCC--CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 999 66554433 3333333221 11122 223455999999999999999996 89999999886
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-33 Score=290.91 Aligned_cols=209 Identities=19% Similarity=0.262 Sum_probs=168.5
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
--...|..+|+++++|||.++|+.++... .++++||| .||++.+.|+ .+..+.+.++..++++++.||.|||++
T Consensus 56 ediqqei~~Ls~~~~~~it~yygsyl~g~----~LwiiMey~~gGsv~~lL~-~~~~~~E~~i~~ilre~l~~l~ylH~~ 130 (467)
T KOG0201|consen 56 EDIQQEISVLSQCDSPNITEYYGSYLKGT----KLWIIMEYCGGGSVLDLLK-SGNILDEFEIAVILREVLKGLDYLHSE 130 (467)
T ss_pred HHHHHHHHHHHhcCcchHHhhhhheeecc----cHHHHHHHhcCcchhhhhc-cCCCCccceeeeehHHHHHHhhhhhhc
Confidence 34447888999999999999999544433 57999999 9999999984 444469999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+.+|||||+.|||+..+|.+|++|||++......
T Consensus 131 ~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~---------------------------------------------- 164 (467)
T KOG0201|consen 131 KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT---------------------------------------------- 164 (467)
T ss_pred ceecccccccceeEeccCcEEEEecceeeeeech----------------------------------------------
Confidence 9999999999999999999999999987322110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
..+....+|||.|||||++.+..|+.++||||||++
T Consensus 165 --------------------------------------------~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGIT 200 (467)
T KOG0201|consen 165 --------------------------------------------VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGIT 200 (467)
T ss_pred --------------------------------------------hhccccccccccccchhhhccccccchhhhhhhhHH
Confidence 000122689999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+||++ |+....+ ...+..| ....||.+...+++ ..+|+..||.+||+.||+|.++|.|+|++..
T Consensus 201 aiEla~GePP~s~~hP-mrvlflI-pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 201 AIELAKGEPPHSKLHP-MRVLFLI-PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred HHHHhcCCCCCcccCc-ceEEEec-cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 999999 4433333 1222222 33456666666666 6699999999999999999999999999984
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=287.21 Aligned_cols=205 Identities=19% Similarity=0.243 Sum_probs=160.2
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++..+ +||||+++++ ++.... .+|+|||| .|++|..++.+.. .+++..+..++.||+.||.|||++||
T Consensus 43 ~~e~~il~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i 117 (318)
T cd05570 43 MTEKRVLALAGKHPFLTQLHS-CFQTKD---RLFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHERGI 117 (318)
T ss_pred HHHHHHHHhccCCCCccceee-EEEcCC---EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3555566665 7999999999 555543 68999999 8999999885543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++...... +.
T Consensus 118 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------ 151 (318)
T cd05570 118 IYRDLKLDNVLLDSEGHIKIADFGMCKEGILG----------------------------------GV------------ 151 (318)
T ss_pred EccCCCHHHeEECCCCcEEecccCCCeecCcC----------------------------------CC------------
Confidence 99999999999999999999999887321000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 152 --------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~ 187 (318)
T cd05570 152 --------------------------------------------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLY 187 (318)
T ss_pred --------------------------------------------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHH
Confidence 001136899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
+|++ ||...... .....+..... .++... +...+||.+||+.||.+||++ .++++||||...
T Consensus 188 ~l~~G~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 188 EMLAGQSPFEGDDED-ELFQSILEDEV--RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred HHhhCCCCCCCCCHH-HHHHHHHcCCC--CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999 67654433 33333332211 112223 344599999999999999999 999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-32 Score=284.32 Aligned_cols=205 Identities=19% Similarity=0.285 Sum_probs=162.7
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|...+.-+.|||||+||+ +..... .+|+++|+ .+|+|.+||-++...+.+..+++||.||+.|+.|+|+..|||
T Consensus 66 qEVRCMKLVQHpNiVRLYE-ViDTQT---KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVH 141 (864)
T KOG4717|consen 66 QEVRCMKLVQHPNIVRLYE-VIDTQT---KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVH 141 (864)
T ss_pred HHHHHHHHhcCcCeeeeee-hhcccc---eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 5666788889999999999 443332 58999999 889999999777777999999999999999999999999999
Q ss_pred ccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 145 HNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 145 rDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|||||+|+++- .-|-|||.|||++-.|..-
T Consensus 142 RDLKPENVVFFEKlGlVKLTDFGFSNkf~PG------------------------------------------------- 172 (864)
T KOG4717|consen 142 RDLKPENVVFFEKLGLVKLTDFGFSNKFQPG------------------------------------------------- 172 (864)
T ss_pred ccCCcceeEEeeecCceEeeeccccccCCCc-------------------------------------------------
Confidence 99999998876 6788999888876221000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCC-ccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS-CASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s-~~sDIwSLGvll~ 302 (720)
.+.+..+|+..|-|||++.|..|+ +++||||||||||
T Consensus 173 ------------------------------------------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILy 210 (864)
T KOG4717|consen 173 ------------------------------------------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILY 210 (864)
T ss_pred ------------------------------------------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHH
Confidence 011225899999999999999985 6899999999999
Q ss_pred hccc---cCCCCchHHHHHHHh-hcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSL-RHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l-~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.|+| ||...+.....-..+ .+...|... ++++ +||..||..||.+|.+.+||..++|++....
T Consensus 211 MLVCGq~PFqeANDSETLTmImDCKYtvPshv----S~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 211 MLVCGQPPFQEANDSETLTMIMDCKYTVPSHV----SKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred HHHhCCCccccccchhhhhhhhcccccCchhh----hHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 9999 776554442222222 123334433 4444 9999999999999999999999999998744
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=291.85 Aligned_cols=214 Identities=18% Similarity=0.235 Sum_probs=160.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|..++||||+++++ ++.... ....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++
T Consensus 45 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~ 122 (372)
T cd07853 45 RVFRELKMLCFFKHDNVLSALD-ILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSA 122 (372)
T ss_pred HHHHHHHHHHhCCCCCcCCHhh-eecCCCccccceEEEEeeccccCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4557888999999999999999 444332 122579999997789999885543 599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++........ .
T Consensus 123 ~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~-------------------------------------~------ 159 (372)
T cd07853 123 GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES-------------------------------------K------ 159 (372)
T ss_pred CeeCCCCChHHEEECCCCCEEeccccceeecccCcc-------------------------------------c------
Confidence 999999999999999999999999988743211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
......+|++|+|||++.+.. ++.++|||||||
T Consensus 160 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 193 (372)
T cd07853 160 ----------------------------------------------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGC 193 (372)
T ss_pred ----------------------------------------------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHH
Confidence 001135789999999998754 799999999999
Q ss_pred hhhhccc---cCCCCchHHHHHH----------------------Hh-hcCCCCccc------c-ccCchHHHHHHHcCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMS----------------------SL-RHRVLPPQL------L-LKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~----------------------~l-~~~~~p~~~------~-~~~p~~~~Li~~~L~ 346 (720)
++|||++ ||........... .+ .....++.. . ...+...+||.+||+
T Consensus 194 il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 273 (372)
T cd07853 194 IFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLV 273 (372)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCC
Confidence 9999999 6655433211110 01 111111111 1 122344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004989 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|+||||...
T Consensus 274 ~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 274 FDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred CChhhCcCHHHHhcCHhhCCC
Confidence 999999999999999999886
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=286.26 Aligned_cols=207 Identities=16% Similarity=0.228 Sum_probs=159.6
Q ss_pred hchhhhhhcccCCCCC-ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLR-NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~Hpn-IV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++..+.|++ |+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++
T Consensus 46 ~~~~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~ 120 (324)
T cd05587 46 CTMVEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSK 120 (324)
T ss_pred HHHHHHHHHHhcCCCCceeeeEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3346667788887765 777777 554443 57999999 8999999995543 489999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||++.......
T Consensus 121 ~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~--------------------------------------------- 155 (324)
T cd05587 121 GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG--------------------------------------------- 155 (324)
T ss_pred CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC---------------------------------------------
Confidence 99999999999999999999999999873210000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......+||+.|+|||++.+..++.++|||||||+
T Consensus 156 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi 190 (324)
T cd05587 156 ---------------------------------------------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 190 (324)
T ss_pred ---------------------------------------------CceeeecCCccccChhhhcCCCCCcccchhhhHHH
Confidence 00011468999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+..... .++. ..+...+|+.+||++||.+|+++ .++++||||...
T Consensus 191 l~elltG~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 191 LYEMLAGQPPFDGEDED-ELFQSIMEHNV--SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 999999 67655443 33333333221 1222 23445599999999999999976 899999999875
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=286.77 Aligned_cols=206 Identities=18% Similarity=0.230 Sum_probs=155.3
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------------------
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------- 115 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------------- 115 (720)
...|..+|.++ +|||||++++ ++.... ..++++||| .+|+|.++|....
T Consensus 57 ~~~E~~~l~~l~~h~niv~~~~-~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (338)
T cd05102 57 LMSELKILIHIGNHLNVVNLLG-ACTKPN--GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRV 133 (338)
T ss_pred HHHHHHHHHHhccCcceeeEEe-EecCCC--CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcc
Confidence 34677888888 8999999999 443322 257999999 9999999995321
Q ss_pred -----------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCce
Q 004989 116 -----------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 160 (720)
Q Consensus 116 -----------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~v 160 (720)
..+++.++..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~ 213 (338)
T cd05102 134 DRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVV 213 (338)
T ss_pred ccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcE
Confidence 247788999999999999999999999999999999999999999
Q ss_pred EEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccc
Q 004989 161 SFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240 (720)
Q Consensus 161 kliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~ 240 (720)
||+|||+++...... .+
T Consensus 214 kl~DfG~a~~~~~~~---------------------------------~~------------------------------ 230 (338)
T cd05102 214 KICDFGLARDIYKDP---------------------------------DY------------------------------ 230 (338)
T ss_pred EEeecccccccccCc---------------------------------ch------------------------------
Confidence 999999874321100 00
Q ss_pred ccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHH
Q 004989 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTR 316 (720)
Q Consensus 241 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~ 316 (720)
. ......+++.|+|||++.+..++.++|||||||+||||++ ||........
T Consensus 231 -------~------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~ 285 (338)
T cd05102 231 -------V------------------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE 285 (338)
T ss_pred -------h------------------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH
Confidence 0 0001245778999999998889999999999999999986 6655433333
Q ss_pred HHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 317 TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 317 ~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
....+..+..+.......+...+|+.+||+.||.+|||+.|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 286 FCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 33444433332222223345569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=284.02 Aligned_cols=212 Identities=17% Similarity=0.191 Sum_probs=151.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|.+++||||+++++ ++.... ...+|++|||.+++|.+++.. ....+++..++.++.||+.||.
T Consensus 45 ~~~E~~~l~~l~h~niv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~ 122 (317)
T cd07867 45 ACREIALLRELKHPNVIALQK-VFLSHS-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH 122 (317)
T ss_pred HHHHHHHHHhCCCCCeeeEEE-EEeccC-CCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHH
Confidence 447888999999999999999 443322 236799999977899988732 1224889999999999999999
Q ss_pred HHHHCCceeccCCCCcEEE----ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 136 AAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
|||++||+||||||+|||+ +.++.+||+|||+++..+..... .
T Consensus 123 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~- 169 (317)
T cd07867 123 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L- 169 (317)
T ss_pred HHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc--------------------------------c-
Confidence 9999999999999999999 45678999999988543211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCc
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSC 290 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~ 290 (720)
.......||+.|+|||++.+.. ++.
T Consensus 170 ------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~ 195 (317)
T cd07867 170 ------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTK 195 (317)
T ss_pred ------------------------------------------------------cccCcceecccccCcHHhcCCCccCc
Confidence 0001146799999999997754 899
Q ss_pred cccchhhhchhhhccc---cCCCCchH---------HHH---H-----------HHhhc-------------CCCC-ccc
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEK---------TRT---M-----------SSLRH-------------RVLP-PQL 330 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~---------~~~---~-----------~~l~~-------------~~~p-~~~ 330 (720)
++|||||||++|||++ ||...... ... . ..+.. .... +.+
T Consensus 196 ~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (317)
T cd07867 196 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSL 275 (317)
T ss_pred HHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchh
Confidence 9999999999999999 55322110 000 0 00000 0000 000
Q ss_pred --------cccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 331 --------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 331 --------~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
....+...+|+.+||..||.+|||+.|+|+||||
T Consensus 276 ~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 276 IKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0011234489999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-32 Score=292.82 Aligned_cols=226 Identities=20% Similarity=0.243 Sum_probs=176.2
Q ss_pred ccccccCCCCccchh--hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCC--CHHH
Q 004989 48 ERFGVRGDDSNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYE 122 (720)
Q Consensus 48 ~r~~~~~~~~~~~~~--r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l--~~~~ 122 (720)
.||.+..-...++++ --+.|+.+-++|+|.|||+++|.+-+.+ ++-|.||- +||+|..+|+..-+++ ++..
T Consensus 601 vrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG----f~kIFMEqVPGGSLSsLLrskWGPlKDNEst 676 (1226)
T KOG4279|consen 601 VRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG----FFKIFMEQVPGGSLSSLLRSKWGPLKDNEST 676 (1226)
T ss_pred eEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC----eEEEEeecCCCCcHHHHHHhccCCCccchhH
Confidence 345554444444444 3447777888899999999999433333 78899999 9999999998877778 8999
Q ss_pred HHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 123 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 123 ~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+-.|.+||++||.|||.+.|||||||-+|+|++ -+|.+||.|||.++...
T Consensus 677 m~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA----------------------------- 727 (1226)
T KOG4279|consen 677 MNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA----------------------------- 727 (1226)
T ss_pred HHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc-----------------------------
Confidence 999999999999999999999999999999997 78999999999884421
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.. .|++. ...||..|||||
T Consensus 728 -------gi-----------------------------------------------------nP~TE-TFTGTLQYMAPE 746 (1226)
T KOG4279|consen 728 -------GI-----------------------------------------------------NPCTE-TFTGTLQYMAPE 746 (1226)
T ss_pred -------cC-----------------------------------------------------Ccccc-ccccchhhhChH
Confidence 00 01111 157999999999
Q ss_pred cccCCC--CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCCh
Q 004989 282 ELAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 282 ~l~~~~--~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta 355 (720)
++..++ |+.++|||||||++.||.| ||........+|-...--...|.++...+.+ ..||++|+.+||.+||+|
T Consensus 747 vIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA 826 (1226)
T KOG4279|consen 747 VIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSA 826 (1226)
T ss_pred hhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccH
Confidence 998776 9999999999999999999 5655444455555554333333344444444 499999999999999999
Q ss_pred HHHHcCcccCCC
Q 004989 356 GELLQSEFLNEP 367 (720)
Q Consensus 356 ~eiL~hp~~~~~ 367 (720)
.++|+.||++..
T Consensus 827 ~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 827 KDLLQDPFLQHN 838 (1226)
T ss_pred HHhccCcccccC
Confidence 999999999876
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=294.99 Aligned_cols=205 Identities=20% Similarity=0.291 Sum_probs=156.4
Q ss_pred hhhhhcccCC-C-----CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGD-H-----LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~-H-----pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.|..+|.+|+ | -|||++++.++ ... ++|||+|+.+.+|.++|+. ...+++...++.|+.||+.||.+||
T Consensus 231 ~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~-fr~---HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~ 306 (586)
T KOG0667|consen 231 IEIRILELLNKHDPDDKYNIVRMLDYFY-FRN---HLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH 306 (586)
T ss_pred HHHHHHHHHhccCCCCCeeEEEeeeccc-ccc---ceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7888888887 3 48999999433 333 7899999999999999943 4456999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccC--CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 139 SQGIVVHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+.||||+||||+||||... ..||+||||+++..+.-.
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v----------------------------------------- 345 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV----------------------------------------- 345 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccccCCcc-----------------------------------------
Confidence 9999999999999999843 479999999885432110
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchh
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
..++.+..|+|||++.|.+|+.+.||||
T Consensus 346 ----------------------------------------------------ytYiQSRfYRAPEVILGlpY~~~IDmWS 373 (586)
T KOG0667|consen 346 ----------------------------------------------------YTYIQSRFYRAPEVILGLPYDTAIDMWS 373 (586)
T ss_pred ----------------------------------------------------eeeeeccccccchhhccCCCCCccceee
Confidence 0146688999999999999999999999
Q ss_pred hhchhhhccc--cCCCCchHHHHHHHhhc--CCCCccccc----------------------------------------
Q 004989 297 LGVLLFELFC--PFSTGEEKTRTMSSLRH--RVLPPQLLL---------------------------------------- 332 (720)
Q Consensus 297 LGvll~eLlt--pf~~~~~~~~~~~~l~~--~~~p~~~~~---------------------------------------- 332 (720)
||||++||++ |+.+.+.....+..|.. +.+|+.++.
T Consensus 374 LGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 453 (586)
T KOG0667|consen 374 LGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKA 453 (586)
T ss_pred hhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhh
Confidence 9999999999 44333322222222211 111110000
Q ss_pred ----cCc----------------hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 333 ----KFP----------------KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ----~~p----------------~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..| ...+|+++||.+||..|+|+.++|+||||...
T Consensus 454 ~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 454 RLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT 508 (586)
T ss_pred cccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence 001 12499999999999999999999999999965
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=286.25 Aligned_cols=202 Identities=19% Similarity=0.219 Sum_probs=158.2
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ .+.... .+|++||| .|++|..++.+. ..+++..++.++.||+.||+|||++||+||||
T Consensus 48 ~~l~~~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl 122 (325)
T cd05604 48 VLLKNVKHPFLVGLHY-SFQTTE---KLYFVLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDL 122 (325)
T ss_pred HHHHhCCCCCCccEEE-EEecCC---EEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 4577899999999998 554443 57999999 899999988544 35999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.+||+|||++...... .+
T Consensus 123 kp~NIll~~~~~~kL~DfG~~~~~~~~---------------------------------~~------------------ 151 (325)
T cd05604 123 KPENILLDSQGHVVLTDFGLCKEGIAQ---------------------------------SD------------------ 151 (325)
T ss_pred CHHHeEECCCCCEEEeecCCcccCCCC---------------------------------CC------------------
Confidence 999999999999999999987321000 00
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G 192 (325)
T cd05604 152 ---------------------------------------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred ---------------------------------------CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcC
Confidence 0011468999999999999889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004989 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...... ..+..+....+. ......+...+++.+||..+|.+||++ .+++.||||...
T Consensus 193 ~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 193 LPPFYCRDVA-EMYDNILHKPLV-LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCCCCCHH-HHHHHHHcCCcc-CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 66654433 333333332211 111233445599999999999999976 589999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=292.31 Aligned_cols=209 Identities=20% Similarity=0.229 Sum_probs=177.9
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
-|...|+.+|..|+|||||++|+.|..... ..+.+|.|+ ..|+|++|+++.++ ++...++.|++||+.||.|||++
T Consensus 86 eR~~~Ev~lLKsL~H~NIirfy~SW~d~~n--~~in~iTEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~ 162 (632)
T KOG0584|consen 86 ERLYSEVHLLKSLKHPNIIRFYDSWVDTDN--KTINFITELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQ 162 (632)
T ss_pred HHHHHHHHHHccCCCCceeeeeeheecCCC--ceeeeeeecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcC
Confidence 377788999999999999999995554443 467899999 99999999976655 99999999999999999999997
Q ss_pred --CceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 141 --GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 --gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.|||||||.+||+|+ ..|.|||.|+|+| ....
T Consensus 163 ~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA---------------------------------------------tl~r 197 (632)
T KOG0584|consen 163 DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA---------------------------------------------TLLR 197 (632)
T ss_pred CCCccccccccceEEEcCCcCceeecchhHH---------------------------------------------HHhh
Confidence 699999999999998 5688999666665 2211
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.. .....+|||.|||||++. ..|...+|||||
T Consensus 198 ~s-----------------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaF 229 (632)
T KOG0584|consen 198 KS-----------------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAF 229 (632)
T ss_pred cc-----------------------------------------------ccceeccCccccChHHHh-hhcchhhhhhhh
Confidence 10 011258999999999997 449999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+.+.||+| ||........+++.+..++.|..+.. ..|...+||.+||.. .+.|||+.|+|.||||...
T Consensus 230 GMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 230 GMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred hHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 999999999 89888889999999999999887755 456677999999999 9999999999999999986
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=286.36 Aligned_cols=207 Identities=18% Similarity=0.202 Sum_probs=158.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++.... .+|++||| .|++|.+++...+ .+++..+..++.||+.||.|||+.
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~ 123 (333)
T cd06650 49 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 123 (333)
T ss_pred HHHHHHHHHHHCCCCcccceeE-EEEECC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 4457888999999999999999 554443 67999999 8999999995543 489999999999999999999985
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+|+||||||+|||++.++.+||+|||++......
T Consensus 124 ~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---------------------------------------------- 157 (333)
T cd06650 124 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 157 (333)
T ss_pred CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh----------------------------------------------
Confidence 7999999999999999999999999887321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i 191 (333)
T cd06650 158 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191 (333)
T ss_pred ----------------------------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHH
Confidence 0001367899999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHH--H-----------------------------------------HHhhcCCCCcccc-c-
Q 004989 301 LFELFC---PFSTGEEKTRT--M-----------------------------------------SSLRHRVLPPQLL-L- 332 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~--~-----------------------------------------~~l~~~~~p~~~~-~- 332 (720)
+|||++ ||......... + ..+... .++.+. .
T Consensus 192 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 270 (333)
T cd06650 192 LVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNE-PPPKLPSGV 270 (333)
T ss_pred HHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcC-CCccCCCCC
Confidence 999999 56543221100 0 000000 111111 1
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+|+.+||++||++|||+.|++.||||+..
T Consensus 271 ~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 271 FGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 12334599999999999999999999999999865
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=283.89 Aligned_cols=203 Identities=15% Similarity=0.189 Sum_probs=158.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+...++..++||||+++++ ++.... .+|+|||| .|++|..++... .+++..++.++.||+.||.|||++||+|
T Consensus 51 ~~~~~~~~l~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivH 124 (324)
T cd05589 51 RIFETANSERHPFLVNLFA-CFQTED---HVCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHENKIVY 124 (324)
T ss_pred HHHHhccccCCCChhceee-EEEcCC---EEEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 3344567889999999999 555543 67999999 899999988542 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++.......
T Consensus 125 rdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------- 155 (324)
T cd05589 125 RDLKLDNLLLDTEGFVKIADFGLCKEGMGFG------------------------------------------------- 155 (324)
T ss_pred cCCCHHHeEECCCCcEEeCcccCCccCCCCC-------------------------------------------------
Confidence 9999999999999999999998873210000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......+||+.|+|||.+.+..++.++|||||||++|||
T Consensus 156 -----------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el 194 (324)
T cd05589 156 -----------------------------------------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEM 194 (324)
T ss_pred -----------------------------------------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHH
Confidence 000114689999999999988899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
++ ||...... .....+..... .++.. .+...+||.+||+.||.+|| ++.++++||||...
T Consensus 195 ~~G~~pf~~~~~~-~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 195 LVGESPFPGDDEE-EVFDSIVNDEV--RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhCCC--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 99 66654443 23333332211 11122 34456999999999999999 69999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=293.21 Aligned_cols=210 Identities=15% Similarity=0.170 Sum_probs=158.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..+|.+++|||||++++ ++.... .+|++||+.+++|.+++.. ...+++.+++.|+.||+.||.|||++||||
T Consensus 134 ~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givH 208 (392)
T PHA03207 134 GREIDILKTISHRAIINLIH-AYRWKS---TVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIH 208 (392)
T ss_pred HHHHHHHHhcCCCCccceee-eEeeCC---EEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 47888999999999999999 554433 6799999977899999943 345999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++.........
T Consensus 209 rDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~----------------------------------------------- 241 (392)
T PHA03207 209 RDVKTENIFLDEPENAVLGDFGAACKLDAHPDT----------------------------------------------- 241 (392)
T ss_pred cCCCHHHEEEcCCCCEEEccCccccccCccccc-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.......||+.|+|||++.+..++.++|||||||++|||
T Consensus 242 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el 280 (392)
T PHA03207 242 -----------------------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280 (392)
T ss_pred -----------------------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHH
Confidence 000114689999999999988899999999999999999
Q ss_pred cc---cCCCCchH------HHHHHHhhc----------------------CCCCcc----cc---ccCchHHHHHHHcCC
Q 004989 305 FC---PFSTGEEK------TRTMSSLRH----------------------RVLPPQ----LL---LKFPKEASFCLWLLH 346 (720)
Q Consensus 305 lt---pf~~~~~~------~~~~~~l~~----------------------~~~p~~----~~---~~~p~~~~Li~~~L~ 346 (720)
++ ||.+.... ......+.. ...++. .. ....+..+||.+||+
T Consensus 281 ~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~ 360 (392)
T PHA03207 281 SVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLT 360 (392)
T ss_pred HHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhc
Confidence 98 66543210 011111100 000000 00 011234489999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004989 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|.||||...
T Consensus 361 ~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 361 FDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred cChhhCCCHHHHhhCchhhcc
Confidence 999999999999999999865
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-31 Score=272.81 Aligned_cols=209 Identities=18% Similarity=0.207 Sum_probs=162.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..++|..++.+++||||+++++ +++... .+++++|| .|++|.+++.... .+++..++.++.||+.||.|||+.|
T Consensus 50 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~ 124 (263)
T cd06625 50 ALECEIQLLKNLQHERIVQYYG-CLRDDE---TLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSNM 124 (263)
T ss_pred HHHHHHHHHHhCCCCCeeeeEE-EEccCC---eEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447778999999999999999 554443 68999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||+|+||+++.++.++|+|||.+......... ..
T Consensus 125 i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~----------- 162 (263)
T cd06625 125 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS-------------------------------GT----------- 162 (263)
T ss_pred eecCCCCHHHEEEcCCCCEEEeecccceeccccccc-------------------------------cc-----------
Confidence 999999999999999999999999987432110000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||++.+..++.++|||||||++
T Consensus 163 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 197 (263)
T cd06625 163 ---------------------------------------------GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTV 197 (263)
T ss_pred ---------------------------------------------cccCCCcCccccCcceeccCCCCchhhhHHHHHHH
Confidence 00013568899999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||++ ||........... .......+.+.... +...+|+.+||..+|.+|||+.++++||||
T Consensus 198 ~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 198 VEMLTEKPPWAEFEAMAAIFK-IATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHhCCCCccccchHHHHHH-HhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 99999 5655444333333 22222233333333 445599999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=284.28 Aligned_cols=205 Identities=17% Similarity=0.230 Sum_probs=158.2
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+ .||+|+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++||+
T Consensus 49 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 123 (323)
T cd05616 49 VEKRVLALSGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSKGII 123 (323)
T ss_pred HHHHHHHhccCCCeEeeEEE-EEecCC---EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 455555554 5888999988 555543 57999999 8999999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... .
T Consensus 124 HrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~----------------------------------~------------- 156 (323)
T cd05616 124 YRDLKLDNVMLDSEGHIKIADFGMCKENMWDG----------------------------------V------------- 156 (323)
T ss_pred ecCCCHHHeEECCCCcEEEccCCCceecCCCC----------------------------------C-------------
Confidence 99999999999999999999998874211100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 193 (323)
T cd05616 157 -------------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 193 (323)
T ss_pred -------------------------------------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHH
Confidence 0011468999999999999989999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ......++..+|+.+||+.+|.+|+++ .++++||||...
T Consensus 194 lltg~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 194 MLAGQAPFEGEDED-ELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCC-CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 999 66655443 333333332211 111233455699999999999999974 899999999875
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-31 Score=281.02 Aligned_cols=210 Identities=14% Similarity=0.197 Sum_probs=159.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++..+. .+|++|||.+++|.+++...+..+++..++.++.||+.||.|||++||+
T Consensus 51 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 126 (309)
T cd07872 51 AIREVSLLKDLKHANIVTLHD-IVHTDK---SLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVL 126 (309)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEeeCC---eEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 346778999999999999999 554443 5799999966799999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++........
T Consensus 127 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 159 (309)
T cd07872 127 HRDLKPQNLLINERGELKLADFGLARAKSVPTK----------------------------------------------- 159 (309)
T ss_pred cCCCCHHHEEECCCCCEEECccccceecCCCcc-----------------------------------------------
Confidence 999999999999999999999988733211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+. .++.++|||||||++|
T Consensus 160 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 196 (309)
T cd07872 160 -------------------------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFF 196 (309)
T ss_pred -------------------------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 00013568999999998764 4899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--C------------------CCCcc--------ccccCchHHHHHHHcCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH--R------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~------------------~~p~~--------~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
||++ ||............... . ..+.. .....+...+||.+||+.||.+
T Consensus 197 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~ 276 (309)
T cd07872 197 EMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKK 276 (309)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhh
Confidence 9999 56554332211111110 0 00100 0112234459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004989 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||+..
T Consensus 277 R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 277 RISAEEAMKHAYFRSL 292 (309)
T ss_pred CCCHHHHhcChhhhhc
Confidence 9999999999999876
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-31 Score=283.18 Aligned_cols=202 Identities=18% Similarity=0.233 Sum_probs=157.7
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ .+.+.. .+|+|||| .|++|..++.+. ..+++..++.++.||+.||.|||++||+||||
T Consensus 48 ~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dl 122 (321)
T cd05603 48 VLLKNLKHPFLVGLHY-SFQTAE---KLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122 (321)
T ss_pred HHHHhCCCCCccceee-EEEcCC---EEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence 3578899999999998 554443 57999999 899999988543 34899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.+||+|||++....... .
T Consensus 123 kp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------------ 151 (321)
T cd05603 123 KPENILLDSQGHVVLTDFGLCKEGVEPE---------------------------------E------------------ 151 (321)
T ss_pred CHHHeEECCCCCEEEccCCCCccCCCCC---------------------------------C------------------
Confidence 9999999999999999998873210000 0
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (321)
T cd05603 152 ---------------------------------------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYG 192 (321)
T ss_pred ---------------------------------------ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcC
Confidence 0011468999999999998889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004989 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...+.. .....+...... ..........+++.+||+.||.+||++ .++++|+||...
T Consensus 193 ~~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 193 LPPFYSRDVS-QMYDNILHKPLQ-LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCCCCCCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 66554433 333444333211 111233455699999999999999875 499999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=284.79 Aligned_cols=206 Identities=16% Similarity=0.249 Sum_probs=158.3
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.++ +||||+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~iv 118 (327)
T cd05617 44 TEKHVFEQASSNPFLVGLHS-CFQTTS---RLFLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHERGII 118 (327)
T ss_pred HHHHHHHhhcCCCCEeeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 555666666 6999999999 555543 58999999 8999999885443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... +
T Consensus 119 HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------~-------------- 151 (327)
T cd05617 119 YRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG---------------------------------D-------------- 151 (327)
T ss_pred ccCCCHHHEEEeCCCCEEEeccccceeccCCC---------------------------------C--------------
Confidence 99999999999999999999998873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 188 (327)
T cd05617 152 -------------------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFE 188 (327)
T ss_pred -------------------------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCC------chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC------hHHHHcCcccCCC
Q 004989 304 LFC---PFSTG------EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~------~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt------a~eiL~hp~~~~~ 367 (720)
|++ ||... .........+.... ..++... +...+++.+||.+||.+|++ +.++++||||...
T Consensus 189 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 189 MMAGRSPFDIITDNPDMNTEDYLFQVILEKP--IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HHhCCCCCCccCCCcccccHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 999 66421 11122233332221 1122222 44559999999999999997 4699999999986
Q ss_pred c
Q 004989 368 R 368 (720)
Q Consensus 368 ~ 368 (720)
.
T Consensus 267 ~ 267 (327)
T cd05617 267 D 267 (327)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=284.11 Aligned_cols=208 Identities=17% Similarity=0.243 Sum_probs=157.9
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ +++++. .+|+|||| .|++|.+++.+....+++..++.++.||+.||+|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 125 (331)
T cd05597 50 EERDVLVNGDRRWITNLHY-AFQDEN---NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVH 125 (331)
T ss_pred HHHHHHHhCCCCCCCceEE-EEecCC---eEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 5666788899999999999 555543 67999999 899999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++........
T Consensus 126 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 157 (331)
T cd05597 126 RDIKPDNVLLDKNGHIRLADFGSCLRLLADGT------------------------------------------------ 157 (331)
T ss_pred CCCCHHHEEECCCCCEEEEECCceeecCCCCC------------------------------------------------
Confidence 99999999999999999999998743211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~ 196 (331)
T cd05597 158 -----------------------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGV 196 (331)
T ss_pred -----------------------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhh
Confidence 00011368999999999963 34788999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc----CCCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~----~~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... ..+..+.. ..+++......+...+|+.+||..++.. |+++.++++||||...
T Consensus 197 ~l~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 197 CMYEMLYGETPFYAESLV-ETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HHHHHhhCCCCCCCCCHH-HHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 9999999 66554333 22222222 1223332223344569999988764443 7899999999999875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-31 Score=277.14 Aligned_cols=206 Identities=16% Similarity=0.216 Sum_probs=160.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ .+..+. .+|++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05605 48 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI 123 (285)
T ss_pred HHHHHHHHhcCCCCEeeeee-eecCCC---eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 46788999999999999999 454443 67999999 89999998843 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 124 vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------------------------------------- 156 (285)
T cd05605 124 VYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----------------------------------------------- 156 (285)
T ss_pred EecCCCHHHEEECCCCCEEEeeCCCceecCCCC-----------------------------------------------
Confidence 999999999999999999999988763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||++.+..++.++||||+||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~ 192 (285)
T cd05605 157 --------------------------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIY 192 (285)
T ss_pred --------------------------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHH
Confidence 000136799999999999888999999999999999
Q ss_pred hccc---cCCCCchHH---HHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKT---RTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~---~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||....... .....+... ++.+.... +...+||.+||+.||.+|| +++++++||||...
T Consensus 193 el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 193 EMIEGKSPFRQRKEKVKREEVERRVKED--QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred HHHHCCCCCCCCchhhHHHHHHHHhhhc--ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 9998 666543221 122222211 12222223 3446999999999999999 89999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=276.70 Aligned_cols=206 Identities=17% Similarity=0.228 Sum_probs=155.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++++++||||+++++ ++.+.. .+|+++||.+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 47 ~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H 122 (284)
T cd07839 47 LREICLLKELKHKNIVRLYD-VLHSDK---KLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLH 122 (284)
T ss_pred hHHHHHHHhcCCCCeeeHHH-HhccCC---ceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 35777999999999999999 444433 57999999777999988655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+...+.... .
T Consensus 123 ~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------~--------------- 155 (284)
T cd07839 123 RDLKPQNLLINKNGELKLADFGLARAFGIPVR--------------------------------C--------------- 155 (284)
T ss_pred CCCCHHHEEEcCCCcEEECccchhhccCCCCC--------------------------------C---------------
Confidence 99999999999999999999998743321100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
.....+++.|+|||.+.+.. ++.++|||||||++||
T Consensus 156 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 192 (284)
T cd07839 156 -------------------------------------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 192 (284)
T ss_pred -------------------------------------------cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHH
Confidence 00135688999999987755 7999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-------------------CCCCc---------cccccCchHHHHHHHcCCCCCCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH-------------------RVLPP---------QLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~-------------------~~~p~---------~~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
|++ ||.+..........+.. ...+. ......+...+|+.+||+.||.+|
T Consensus 193 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 272 (284)
T cd07839 193 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQR 272 (284)
T ss_pred HHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhc
Confidence 998 54433322222211110 00000 001122344599999999999999
Q ss_pred CChHHHHcCccc
Q 004989 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
||+++++.||||
T Consensus 273 ~t~~~il~h~~f 284 (284)
T cd07839 273 ISAEEALQHPYF 284 (284)
T ss_pred CCHHHHhcCCCC
Confidence 999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=288.60 Aligned_cols=207 Identities=16% Similarity=0.207 Sum_probs=157.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.++. .+|+|||| .|++|.+++... .+++..++.++.||+.||.|||++||+
T Consensus 91 ~~e~~i~~~~~hp~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~iv 164 (371)
T cd05622 91 WEERDIMAFANSPWVVQLFY-AFQDDR---YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFI 164 (371)
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 35677888999999999999 554443 68999999 899999998543 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++++||+|||++........
T Consensus 165 HrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~----------------------------------------------- 197 (371)
T cd05622 165 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM----------------------------------------------- 197 (371)
T ss_pred eCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc-----------------------------------------------
Confidence 999999999999999999999998743211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----CCccccchhhhc
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGV 299 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+.. ++.++|||||||
T Consensus 198 ------------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGv 235 (371)
T cd05622 198 ------------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 235 (371)
T ss_pred ------------------------------------------ccccCcccCccccCHHHHhccCCCccCCCccceeehhH
Confidence 0001146899999999997543 789999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCC--CC-ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~--~p-~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... .....+.... ++ +......+...+||.+||..+|.+ |+++.++++||||...
T Consensus 236 ilyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 236 FLYEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 9999999 67654443 3334443322 11 111223344459999999844433 7899999999999875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=298.34 Aligned_cols=212 Identities=16% Similarity=0.207 Sum_probs=144.3
Q ss_pred CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEE
Q 004989 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NIL 153 (720)
+|++|+++++ ++.... .++|+|||+.|++|.+++.+.+ .+++..++.|+.||+.||+|||+ .|||||||||+|||
T Consensus 189 ~~~~i~~i~~-~~~~~~--~~~~iv~~~~g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NIL 264 (467)
T PTZ00284 189 DRFPLMKIQR-YFQNET--GHMCIVMPKYGPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENIL 264 (467)
T ss_pred cCcceeeeEE-EEEcCC--ceEEEEEeccCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEE
Confidence 3456888888 454332 3689999998999999995543 59999999999999999999998 59999999999999
Q ss_pred EccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccc
Q 004989 154 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 233 (720)
Q Consensus 154 l~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~ 233 (720)
++.++... ++...... ......++++|||.+.....
T Consensus 265 l~~~~~~~--~~~~~~~~---------------------------~~~~~~vkl~DfG~~~~~~~--------------- 300 (467)
T PTZ00284 265 METSDTVV--DPVTNRAL---------------------------PPDPCRVRICDLGGCCDERH--------------- 300 (467)
T ss_pred EecCCccc--cccccccc---------------------------CCCCceEEECCCCccccCcc---------------
Confidence 98765311 11000000 00001234455554321000
Q ss_pred cccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCC
Q 004989 234 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 310 (720)
Q Consensus 234 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~ 310 (720)
.....+||+.|+|||++.+..|+.++|||||||++|||++ ||..
T Consensus 301 ---------------------------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 301 ---------------------------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred ---------------------------------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 0012478999999999999999999999999999999999 6655
Q ss_pred CchHHHH--HHHhhcCCCCcccc---------------------------------------ccCchHHHHHHHcCCCCC
Q 004989 311 GEEKTRT--MSSLRHRVLPPQLL---------------------------------------LKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 311 ~~~~~~~--~~~l~~~~~p~~~~---------------------------------------~~~p~~~~Li~~~L~~dP 349 (720)
....... +..+. +.+|..+. ...+...+||.+||++||
T Consensus 348 ~~~~~~~~~i~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 348 HDNLEHLHLMEKTL-GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CChHHHHHHHHHHc-CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 4332111 11110 11111100 011234599999999999
Q ss_pred CCCCChHHHHcCcccCCCc
Q 004989 350 SGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~ 368 (720)
.+|||++|+|+||||....
T Consensus 427 ~~R~ta~e~L~Hp~~~~~~ 445 (467)
T PTZ00284 427 QKRLNARQMTTHPYVLKYY 445 (467)
T ss_pred hhCCCHHHHhcCccccccC
Confidence 9999999999999998753
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=286.17 Aligned_cols=207 Identities=21% Similarity=0.211 Sum_probs=156.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++||||+++++ ++.... .+|++||| .+++|.+.. ..++..+..++.||+.||.|||++||
T Consensus 119 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~i 189 (353)
T PLN00034 119 ICREIEILRDVNHPNVVKCHD-MFDHNG---EIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHI 189 (353)
T ss_pred HHHHHHHHHhCCCCCcceeee-EeccCC---eEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347888999999999999999 554443 57999999 888886532 25788889999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++....... +
T Consensus 190 vHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------------------------~------------- 223 (353)
T PLN00034 190 VHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---------------------------------D------------- 223 (353)
T ss_pred eecCCCHHHEEEcCCCCEEEcccccceeccccc---------------------------------c-------------
Confidence 999999999999999999999998874321000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRL 297 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSL 297 (720)
.....+||..|+|||++.. ...+.++|||||
T Consensus 224 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Dvwsl 259 (353)
T PLN00034 224 --------------------------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSL 259 (353)
T ss_pred --------------------------------------------cccccccCccccCccccccccccCcCCCcchhHHHH
Confidence 0001368999999999843 224679999999
Q ss_pred hchhhhccc---cCCCC--chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 298 GVLLFELFC---PFSTG--EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 298 Gvll~eLlt---pf~~~--~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++|||++ ||... ......+..+.....+.......+...+||.+||+.||++|||+.|+|+||||.....
T Consensus 260 Gvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 260 GVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred HHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 999999999 66532 2222333333322222222233345569999999999999999999999999998743
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-31 Score=294.16 Aligned_cols=210 Identities=15% Similarity=0.170 Sum_probs=157.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..+|++++|||||++++ ++..+. ..+++||+..++|.+++......+++.+++.|+.||+.||.|||++||||
T Consensus 208 ~~E~~iL~~L~HpnIv~l~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvH 283 (461)
T PHA03211 208 VHEARLLRRLSHPAVLALLD-VRVVGG---LTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIH 283 (461)
T ss_pred HHHHHHHHHCCCCCCCcEEE-EEEECC---EEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 36888999999999999999 444432 57899999778999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.++.++|+|||+++....... ..
T Consensus 284 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-------------------------------~~--------------- 317 (461)
T PHA03211 284 RDIKTENVLVNGPEDICLGDFGAACFARGSWS-------------------------------TP--------------- 317 (461)
T ss_pred CcCCHHHEEECCCCCEEEcccCCceecccccc-------------------------------cc---------------
Confidence 99999999999999999999988743210000 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......||+.|+|||++.+..++.++|||||||+||||
T Consensus 318 ------------------------------------------~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El 355 (461)
T PHA03211 318 ------------------------------------------FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEA 355 (461)
T ss_pred ------------------------------------------cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHH
Confidence 00014689999999999998899999999999999999
Q ss_pred cc---cCCCCc-------hHHHHHHHhhcCC-----CCcc----------------------------ccccCchHHHHH
Q 004989 305 FC---PFSTGE-------EKTRTMSSLRHRV-----LPPQ----------------------------LLLKFPKEASFC 341 (720)
Q Consensus 305 lt---pf~~~~-------~~~~~~~~l~~~~-----~p~~----------------------------~~~~~p~~~~Li 341 (720)
++ ++.... ........+.... +++. +....+...+||
T Consensus 356 ~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli 435 (461)
T PHA03211 356 AVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLV 435 (461)
T ss_pred HHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHH
Confidence 87 222110 0111222222111 1110 001123455899
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCC
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
.+||..||.+|||+.|+|+||||+.
T Consensus 436 ~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 436 CRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHHcccChhhCcCHHHHhhCcccCC
Confidence 9999999999999999999999975
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=281.31 Aligned_cols=215 Identities=18% Similarity=0.158 Sum_probs=156.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+++.++|||||++++ ++..+. .+|+|||| .+++|.+++... ...+++..++.++.||+.||+|||++||
T Consensus 47 ~~e~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i 122 (327)
T cd08227 47 QGELHVSKLFNHPNIVPYRA-TFIADN---ELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGY 122 (327)
T ss_pred HHHHHHHHhcCCCCeeeEEE-EEEECC---EEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 36777899999999999999 554443 57999999 899999999542 3458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+++.||+.+... .++|.....
T Consensus 123 iH~dlkp~Nil~~~~~~~~l~~~~~~~~~------------------------------------~~~~~~~~~------ 160 (327)
T cd08227 123 VHRSVKASHILISVDGKVYLSGLRSNLSM------------------------------------INHGQRLRV------ 160 (327)
T ss_pred ecCCCChhhEEEecCCcEEEcccchhhcc------------------------------------ccccccccc------
Confidence 99999999999999999999988765221 011100000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCccccchhhhch
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVL 300 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGvl 300 (720)
..+ ++ ....++..|+|||++.+. .++.++|||||||+
T Consensus 161 ------------------------~~~--------------~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~i 199 (327)
T cd08227 161 ------------------------VHD--------------FP---KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT 199 (327)
T ss_pred ------------------------ccc--------------cc---ccccceecccChHHhhcccCCCCchhhHHHHHHH
Confidence 000 00 012467789999999763 48999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC---------c------------------------------------cccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP---------P------------------------------------QLLL 332 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p---------~------------------------------------~~~~ 332 (720)
+|||++ ||............+.. ..+ + ....
T Consensus 200 l~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (327)
T cd08227 200 ACELANGHVPFKDMPATQMLLEKLNG-TVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRT 278 (327)
T ss_pred HHHHHHCCCCCCCcchhHHHHHHhcC-CccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccc
Confidence 999999 56543322222222111 000 0 0001
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+|+.+||++||++|||+.|+++||||+..
T Consensus 279 ~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 279 FSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred cCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 12345599999999999999999999999999875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=268.21 Aligned_cols=217 Identities=18% Similarity=0.207 Sum_probs=162.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..||..++..+.|||||.+..++...+. .+++++||...+|.+.|+ ...+.++...++.|+.||++||.|||+
T Consensus 74 AcREiaL~REl~h~nvi~Lv~Vfl~~d~---~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~ 150 (438)
T KOG0666|consen 74 ACREIALLRELKHPNVISLVKVFLSHDK---KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS 150 (438)
T ss_pred HHHHHHHHHHhcCCcchhHHHHHhccCc---eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh
Confidence 3478889999999999999995555332 589999998899999993 234568999999999999999999999
Q ss_pred CCceeccCCCCcEEEccC----CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 140 QGIVVHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
+=|+||||||.|||+..+ |.|||.|||+++.+..+-.. |
T Consensus 151 NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp--------------------------------l----- 193 (438)
T KOG0666|consen 151 NWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP--------------------------------L----- 193 (438)
T ss_pred hheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc--------------------------------c-----
Confidence 999999999999999977 89999888887665333100 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDI 294 (720)
. .....+-|.||+|||++.|.. |+++.||
T Consensus 194 --------~------------------------------------------s~d~VVVTiWYRAPELLLGa~hYT~AiDv 223 (438)
T KOG0666|consen 194 --------A------------------------------------------SLDPVVVTIWYRAPELLLGARHYTKAIDV 223 (438)
T ss_pred --------c------------------------------------------cCCceEEEEEecChHHhcccccccchhhh
Confidence 0 001246799999999999988 9999999
Q ss_pred hhhhchhhhccc--cCC-CCch------------HHHHHHHhhc------------------------CCCCcc-c----
Q 004989 295 YRLGVLLFELFC--PFS-TGEE------------KTRTMSSLRH------------------------RVLPPQ-L---- 330 (720)
Q Consensus 295 wSLGvll~eLlt--pf~-~~~~------------~~~~~~~l~~------------------------~~~p~~-~---- 330 (720)
|++|||+.||++ |.. +.++ ..+++..+.. ....+. +
T Consensus 224 WAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~ 303 (438)
T KOG0666|consen 224 WAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYY 303 (438)
T ss_pred HHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHH
Confidence 999999999999 532 2111 1112222211 000000 0
Q ss_pred ---cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 331 ---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 331 ---~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
....|...+|+.+||.+||-+|.|++++|+|+||.+...+
T Consensus 304 ~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 304 HKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 0022334589999999999999999999999999987443
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=310.41 Aligned_cols=220 Identities=19% Similarity=0.204 Sum_probs=177.8
Q ss_pred cchhhch-hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 59 DFELRKH-SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 59 ~~~~r~~-~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
...+... +|-.+|..++|||+|++|++ +.+...++|.||| .||+|.+.+ ..++..++...+.+..|++.||.|
T Consensus 1275 ~k~~~~i~eEm~vlE~lnHpNlV~YyGV----EvHRekv~IFMEyC~~GsLa~ll-~~gri~dE~vt~vyt~qll~gla~ 1349 (1509)
T KOG4645|consen 1275 HKTFKLIAEEMKVLEGLNHPNLVRYYGV----EVHREKVYIFMEYCEGGSLASLL-EHGRIEDEMVTRVYTKQLLEGLAY 1349 (1509)
T ss_pred cccCcchHHHHHHHHhccCccccccCce----eecHHHHHHHHHHhccCcHHHHH-HhcchhhhhHHHHHHHHHHHHHHH
Confidence 4444333 78889999999999999993 2333357999999 999999988 455558888999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++|||||||||+||+|+.+|-+|+.|||.|...-..
T Consensus 1350 LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~------------------------------------------ 1387 (1509)
T KOG4645|consen 1350 LHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN------------------------------------------ 1387 (1509)
T ss_pred HHhcCceecCCCccceeeecCCcEEeecccceeEecCc------------------------------------------
Confidence 99999999999999999999999999999988432111
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC---CCcccc
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASD 293 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sD 293 (720)
.+++|..-...+||+.|||||++.+.. ..-++|
T Consensus 1388 --------------------------------------------~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~D 1423 (1509)
T KOG4645|consen 1388 --------------------------------------------AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAAD 1423 (1509)
T ss_pred --------------------------------------------hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchh
Confidence 011111112368999999999997765 577999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||||||++.||+| ||...+...++|..+..+..|+......+...+||..||..||+.|.++.|||+|-|-+...+
T Consensus 1424 iWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1424 IWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred hhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 9999999999999 777777777888888877777666665566679999999999999999999999999776543
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=280.56 Aligned_cols=201 Identities=18% Similarity=0.237 Sum_probs=157.6
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ ++.... .+|++||| .|++|.+++... ..+++..++.++.||+.||.|||++||+||||
T Consensus 48 ~~l~~~~h~~Iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDl 122 (325)
T cd05602 48 VLLKNVKHPFLVGLHF-SFQTAD---KLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLNIVYRDL 122 (325)
T ss_pred HHHHhCCCCCCCceeE-EEEcCC---eEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 4577899999999998 554443 57999999 899999999554 34899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.++|+|||++....... .
T Consensus 123 kp~Nili~~~~~~kl~DfG~a~~~~~~~---------------------------------~------------------ 151 (325)
T cd05602 123 KPENILLDSQGHIVLTDFGLCKENIEHN---------------------------------G------------------ 151 (325)
T ss_pred CHHHeEECCCCCEEEccCCCCcccccCC---------------------------------C------------------
Confidence 9999999999999999998873210000 0
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (325)
T cd05602 152 ---------------------------------------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred ---------------------------------------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcC
Confidence 0011468999999999999889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH----HHHcCcccCCC
Q 004989 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG----ELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~----eiL~hp~~~~~ 367 (720)
||...... ..+..+..... .+.... +...+|+.+||+.||.+||++. ++++|+||...
T Consensus 193 ~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 193 LPPFYSRNTA-EMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCCCCHH-HHHHHHHhCCc--CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 66654443 33334433221 122233 4445999999999999999876 89999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-31 Score=307.85 Aligned_cols=227 Identities=16% Similarity=0.167 Sum_probs=158.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|+.+|.+++|||||++++.++.... ..+|+|||| .+++|.++|.. ....+++..++.|+.||+.||.|||
T Consensus 58 ~~~~EI~IL~~L~HPNIVrl~d~f~de~~--~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLH 135 (1021)
T PTZ00266 58 QLVIEVNVMRELKHKNIVRYIDRFLNKAN--QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCH 135 (1021)
T ss_pred HHHHHHHHHHHcCCCCcCeEEEEEEecCC--CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34478889999999999999994443322 368999999 88999999943 2345999999999999999999999
Q ss_pred HC-------CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 139 SQ-------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 139 s~-------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
+. +||||||||+||||+.... .+.+..... .....+..++|+|||
T Consensus 136 s~g~~~~~k~IVHRDLKPeNILL~s~~~-~lg~i~~~~---------------------------~n~ng~~iVKLsDFG 187 (1021)
T PTZ00266 136 NLKDGPNGERVLHRDLKPQNIFLSTGIR-HIGKITAQA---------------------------NNLNGRPIAKIGDFG 187 (1021)
T ss_pred hcccccccCCceeccCcHHHeEeecCcc-ccccccccc---------------------------cccCCCCceEEccCC
Confidence 84 4999999999999975321 000000000 000001123445555
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCC
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVS 289 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s 289 (720)
++....... .....+||+.|+|||++.+. .++
T Consensus 188 lAr~l~~~s----------------------------------------------~~~s~vGTp~YmAPEvL~ge~~~~s 221 (1021)
T PTZ00266 188 LSKNIGIES----------------------------------------------MAHSCVGTPYYWSPELLLHETKSYD 221 (1021)
T ss_pred ccccccccc----------------------------------------------cccccCCCccccCHHHHhccCCCCC
Confidence 543221100 00114689999999999653 389
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
.++||||||||||||++ ||.........+..+..... ..+....+...+||..||..+|.+||++.|+|+||||..
T Consensus 222 ~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 222 DKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred chhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 99999999999999999 77655554444444443321 112233455669999999999999999999999999963
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=275.31 Aligned_cols=207 Identities=15% Similarity=0.206 Sum_probs=159.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..++.+++|+||+.+++ .+.+.. .+|++||| .|++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 48 ~~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05630 48 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI 123 (285)
T ss_pred HHHHHHHHhCCCCCeeeeeE-EEecCC---EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 35778999999999999998 444443 68999999 89999999843 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++.......
T Consensus 124 iH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------------------------------------- 156 (285)
T cd05630 124 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------------------------------------- 156 (285)
T ss_pred EeCCCCHHHEEECCCCCEEEeeccceeecCCCc-----------------------------------------------
Confidence 999999999999999999999998763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 157 --------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 192 (285)
T cd05630 157 --------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 192 (285)
T ss_pred --------------------------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHH
Confidence 000136799999999999888999999999999999
Q ss_pred hccc---cCCCCchH--HHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
+|++ ||...... ......+.... +..+.. ..+...+|+.+||+.||++||| +.|+++||||.+.
T Consensus 193 ~l~~g~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 193 EMIAGQSPFQQRKKKIKREEVERLVKEV-QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HHHhCCCCCCCCCccchHHHHHhhhhhh-hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 9999 66543211 11111111111 111222 2344569999999999999999 8999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=281.05 Aligned_cols=208 Identities=15% Similarity=0.222 Sum_probs=159.5
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ .+.+.. .+|+|||| .|++|.+++.+....+++..++.++.||+.||+|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~l~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiH 125 (331)
T cd05624 50 EERNVLVNGDCQWITTLHY-AFQDEN---YLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVH 125 (331)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 5566788899999999999 555443 67999999 899999999664556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........
T Consensus 126 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~------------------------------------------------ 157 (331)
T cd05624 126 RDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT------------------------------------------------ 157 (331)
T ss_pred ccCchHHEEEcCCCCEEEEeccceeeccCCCc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGv 196 (331)
T cd05624 158 -----------------------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 196 (331)
T ss_pred -----------------------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeeh
Confidence 00011368999999999875 45789999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+||||++ ||...... .....+... .+|+......+...+|+.+||..++.+ |++++++++||||...
T Consensus 197 il~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 197 CMYEMLYGETPFYAESLV-ETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred hhhhhhhCCCCccCCCHH-HHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 9999999 67654443 233333221 123333223345559999999876654 4689999999999874
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=271.19 Aligned_cols=210 Identities=14% Similarity=0.152 Sum_probs=160.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ .+.... ..|++||| .+++|..++.+...++++..++.++.||+.||.|||+.||
T Consensus 49 ~~~e~~~l~~l~h~~ii~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i 124 (282)
T cd06643 49 YMVEIDILASCDHPNIVKLLD-AFYYEN---NLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKI 124 (282)
T ss_pred HHHHHHHHHHCCCCCeeeEEE-EEeeCC---EEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777899999999999999 444432 57999999 8999999886555569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++++|||++....... .
T Consensus 125 ~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------~------------- 158 (282)
T cd06643 125 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---------------------------------Q------------- 158 (282)
T ss_pred eecCCCcccEEEccCCCEEEccccccccccccc---------------------------------c-------------
Confidence 999999999999999999999998873221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRL 297 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSL 297 (720)
......|++.|+|||++. +..++.++|||||
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 194 (282)
T cd06643 159 --------------------------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 194 (282)
T ss_pred --------------------------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhH
Confidence 000135788999999984 3347889999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|||++ ||......................+..++ ...+||.+||+.+|.+||++.++++||||...
T Consensus 195 Gvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 195 GITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 999999998 66554443333332222111111222333 45599999999999999999999999999975
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=276.36 Aligned_cols=242 Identities=17% Similarity=0.189 Sum_probs=168.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+|..++||||+++++ .+.... .+|++||| .|++|.+++.+ .+..+++..++.++.||+.||.|||+.
T Consensus 47 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 122 (316)
T cd05574 47 RVLTEQEILATLDHPFLPTLYA-SFQTET---YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL 122 (316)
T ss_pred HHHHHHHHHHhCCCCCchhhee-eeecCC---EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC
Confidence 4446778999999999999999 444433 67999999 89999999954 345699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||++........... . . ...+...
T Consensus 123 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~---~-------------~----------~~~~~~~------ 170 (316)
T cd05574 123 GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS---K-------------A----------LRKGSRR------ 170 (316)
T ss_pred CeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc---c-------------c----------ccccccc------
Confidence 999999999999999999999999999854322100000 0 0 0000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.... ....+.............+||..|+|||++.+..++.++|||||||+
T Consensus 171 -~~~~----------------------------~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~l 221 (316)
T cd05574 171 -SSVN----------------------------SIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGIL 221 (316)
T ss_pred -cccc----------------------------ccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHH
Confidence 0000 00000000000001122578999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC----hHHHHcCcccCCCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt----a~eiL~hp~~~~~~~ 369 (720)
+|+|++ ||............+......+......+...+|+.+||+.+|++||| ++|+|+||||+....
T Consensus 222 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 222 LYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred HHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 999999 665544433333223222222222122344559999999999999999 999999999998643
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=269.35 Aligned_cols=213 Identities=17% Similarity=0.219 Sum_probs=163.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++ ++.+. ..++++||| .|++|.+++.+.. .+++..++.++.||+.||.|||+.|
T Consensus 48 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (265)
T cd06631 48 KLQEEVDLLKSLKHVNIVQYLG-TCLDD---NTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNNC 122 (265)
T ss_pred HHHHHHHHHHhcCCCCEeeEee-EeecC---CeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446778999999999999999 55444 368999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||++++++.++|+|||.+......... ...
T Consensus 123 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------~~~----------- 161 (265)
T cd06631 123 VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH------------------------------GTH----------- 161 (265)
T ss_pred cccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc------------------------------ccc-----------
Confidence 999999999999999999999999887432111000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........|+..|+|||.+.+..++.++|||||||++
T Consensus 162 -------------------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~ 198 (265)
T cd06631 162 -------------------------------------------SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTV 198 (265)
T ss_pred -------------------------------------------cccccccCCCccccChhhhcCCCCcchhhHHHHHHHH
Confidence 0000013578999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||...+...............+.+...++. ..+|+.+||+++|.+||++.++++||||
T Consensus 199 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 199 FEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99999 665544433333222222222333334444 4599999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=274.24 Aligned_cols=212 Identities=15% Similarity=0.184 Sum_probs=159.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..++..++||||+++++ ++..+. .+|++|||.+++|.+++......+++..++.++.||+.||.|||+.||
T Consensus 50 ~~~~E~~~l~~l~h~nI~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 125 (301)
T cd07873 50 TAIREVSLLKDLKHANIVTLHD-IIHTEK---SLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKV 125 (301)
T ss_pred HHHHHHHHHHhcCCCCcceEEE-EEecCC---eEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3446788999999999999999 554443 579999996679999996655668999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+........
T Consensus 126 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 159 (301)
T cd07873 126 LHRDLKPQNLLINERGELKLADFGLARAKSIPTK---------------------------------------------- 159 (301)
T ss_pred eCCCCCHHHEEECCCCcEEECcCcchhccCCCCC----------------------------------------------
Confidence 9999999999999999999999988733211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......+++.|+|||++.+.. ++.++|||||||++
T Consensus 160 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l 195 (301)
T cd07873 160 --------------------------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF 195 (301)
T ss_pred --------------------------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHH
Confidence 000124688999999987654 78899999999999
Q ss_pred hhccc---cCCCCchHHHHHH--HhhcC------------------CCCcc-------c-cccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMS--SLRHR------------------VLPPQ-------L-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~--~l~~~------------------~~p~~-------~-~~~~p~~~~Li~~~L~~dP~ 350 (720)
|||++ ||........... .+... ..+.. . ....+...+||.+||++||.
T Consensus 196 ~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~ 275 (301)
T cd07873 196 YEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGR 275 (301)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcc
Confidence 99999 5654432211111 10000 00100 0 01223445999999999999
Q ss_pred CCCChHHHHcCcccCCCc
Q 004989 351 GRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~ 368 (720)
+|||+.|+|+||||....
T Consensus 276 ~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 276 KRISAEEAMKHPYFHCLG 293 (301)
T ss_pred cCcCHHHHhcCccccccc
Confidence 999999999999998764
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=278.58 Aligned_cols=208 Identities=17% Similarity=0.227 Sum_probs=158.9
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ ++.+.. .+|+|||| .+++|.+++.+....+++..++.++.||+.||.|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiH 125 (332)
T cd05623 50 EERDVLVNGDNQWITTLHY-AFQDEN---NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH 125 (332)
T ss_pred HHHHHHhhCCCCCEeeEEE-EEecCC---EEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4566788899999999999 555543 67999999 899999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++....... .
T Consensus 126 rDlkp~Nili~~~~~~kL~DfG~a~~~~~~~---------------------------------~--------------- 157 (332)
T cd05623 126 RDIKPDNILMDMNGHIRLADFGSCLKLMEDG---------------------------------T--------------- 157 (332)
T ss_pred cCCCHHHEEECCCCCEEEeecchheecccCC---------------------------------c---------------
Confidence 9999999999999999999999873221000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGv 196 (332)
T cd05623 158 -----------------------------------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGV 196 (332)
T ss_pred -----------------------------------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHH
Confidence 00011468999999999863 34899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... ..+..+... .+|.......+...+|+.+||..+|.. |+++.|+++||||...
T Consensus 197 il~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 197 CMYEMLYGETPFYAESLV-ETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred HHHHHhcCCCCCCCCCHH-HHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 9999999 67655443 333333322 123322233445559999999765544 6899999999999875
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=265.94 Aligned_cols=208 Identities=17% Similarity=0.243 Sum_probs=161.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
....|..++++++||||+++++ .+.... ..+|++||| .+++|.+++.. ....+++.+++.++.||+.||.|||+.
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~--~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~ 121 (257)
T cd08223 45 AAEQEAQLLSQLKHPNIVAYRE-SWEGED--GLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121 (257)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-eecCCC--CEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3446777899999999999998 333221 257999999 88999999954 344589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+....... .
T Consensus 122 ~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~---------------------------------~----------- 157 (257)
T cd08223 122 HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC---------------------------------D----------- 157 (257)
T ss_pred CeeccCCCchhEEEecCCcEEEecccceEEecccC---------------------------------C-----------
Confidence 99999999999999999999999988873221100 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 191 (257)
T cd08223 158 ----------------------------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCC 191 (257)
T ss_pred ----------------------------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHH
Confidence 0001357889999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||...+.. .....+....+++......+...+|+.+||.++|.+||++.++++||||
T Consensus 192 l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 192 VYEMATLKHAFNAKDMN-SLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHcCCCCCCCCCHH-HHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 999999 56544433 2333333343433322333555699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=268.02 Aligned_cols=210 Identities=16% Similarity=0.217 Sum_probs=161.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ ++.... ..+++||| .+++|.+++... ..+++..+..++.||+.||.|||+.|+
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~i 127 (267)
T cd06628 53 LAREIALLKELQHENIVQYLG-SSLDAD---HLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGI 127 (267)
T ss_pred HHHHHHHHHhcCCCCeeeEEE-EEEeCC---ccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCc
Confidence 347888999999999999999 444433 57899999 899999999554 448999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||+|+||++++++.++|+|||.+.......... ..
T Consensus 128 vH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------~~------------ 165 (267)
T cd06628 128 IHRDIKGANILVDNKGGIKISDFGISKKLEANSLST------------------------------KT------------ 165 (267)
T ss_pred ccccCCHHHEEEcCCCCEEecccCCCcccccccccC------------------------------Cc------------
Confidence 999999999999999999999998874432110000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........|+..|+|||.+.+..++.++|||||||++|
T Consensus 166 ------------------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~ 203 (267)
T cd06628 166 ------------------------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVV 203 (267)
T ss_pred ------------------------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHH
Confidence 00001135788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||........ ...+.....+ .+.... ....+||.+||++||.+||++.++++||||
T Consensus 204 ~l~~g~~p~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 204 EMLTGKHPFPDCTQLQA-IFKIGENASP-EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHhhCCCCCCCccHHHH-HHHHhccCCC-cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 9999 6655444322 2233332222 233333 444599999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=270.94 Aligned_cols=206 Identities=17% Similarity=0.211 Sum_probs=155.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..++.+++||||+++++ ++.++. .+|+||||..++|.+++.. .+..+++..++.++.||+.||.|||++||
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 122 (285)
T cd07861 47 IREISLLKELQHPNIVCLQD-VLMQES---RLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRV 122 (285)
T ss_pred HHHHHHHHhcCCCCEeeeEE-EEeeCC---eEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 36778999999999999999 454443 6799999966799999843 22458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++...+.+..
T Consensus 123 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------- 156 (285)
T cd07861 123 LHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR---------------------------------------------- 156 (285)
T ss_pred eecCCCHHHEEEcCCCcEEECcccceeecCCCcc----------------------------------------------
Confidence 9999999999999999999999988743221100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......+++.|+|||.+.+.. ++.++|||||||++
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il 192 (285)
T cd07861 157 --------------------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIF 192 (285)
T ss_pred --------------------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHH
Confidence 000125688999999987654 78999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC-------------------C--------CccccccCchHHHHHHHcCCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRV-------------------L--------PPQLLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~-------------------~--------p~~~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
|+|++ ||............+.... . ........++..+||.+||+.||.+
T Consensus 193 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 272 (285)
T cd07861 193 AEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAK 272 (285)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhh
Confidence 99999 5554433222222111000 0 0001112344569999999999999
Q ss_pred CCChHHHHcCccc
Q 004989 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
|||+.+++.||||
T Consensus 273 Rpt~~~ll~~~~~ 285 (285)
T cd07861 273 RISAKKALNHPYF 285 (285)
T ss_pred CCCHHHHhcCCCC
Confidence 9999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=264.65 Aligned_cols=207 Identities=18% Similarity=0.238 Sum_probs=163.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++++++||||+++++ .+... ...|++||| .|++|.+++... ...+++..++.++.||+.||.|||+.
T Consensus 45 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 120 (256)
T cd08529 45 EAIDEARVLAKLDSSYIIRYYE-SFLDK---GKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120 (256)
T ss_pred HHHHHHHHHHhcCCCCeehhee-eeccC---CEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3346777899999999999999 44333 267999999 899999999543 45689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||.+........
T Consensus 121 ~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08529 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN-------------------------------------------- 156 (256)
T ss_pred CcccCCCCcceEEEeCCCCEEEcccccceeccCccc--------------------------------------------
Confidence 999999999999999999999999887743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|+++|+|||++.+..++.++|||||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 190 (256)
T cd08529 157 ----------------------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVV 190 (256)
T ss_pred ----------------------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHH
Confidence 0001357889999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||...... .....+.....++......+...+++.+||+.+|++||++.++++|||+
T Consensus 191 l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 191 LYECCTGKHPFDANNQG-ALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 999999 66655433 3333344444443322333455699999999999999999999999996
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=266.94 Aligned_cols=208 Identities=17% Similarity=0.204 Sum_probs=162.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++..++||||+++++ .+.++. .+|++||| .+++|.+++.+.. .+++..+..++.||+.||.|||++|+
T Consensus 40 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~~ 114 (262)
T cd05572 40 IFSEKEILEECNHPFIVKLYR-TFKDKK---YIYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRGI 114 (262)
T ss_pred HHHHHHHHHhCCCCCEeeeee-eEEcCC---ccEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 346677899999999999999 555443 57999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+.......
T Consensus 115 ~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----------------------------------------------- 147 (262)
T cd05572 115 IYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----------------------------------------------- 147 (262)
T ss_pred ccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------------------------------------------
Confidence 999999999999999999999998773321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|+|||||++|
T Consensus 148 --------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~ 183 (262)
T cd05572 148 --------------------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLY 183 (262)
T ss_pred --------------------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHH
Confidence 000135788999999998888999999999999999
Q ss_pred hccc---cCCCCc-hHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
+|++ ||.... .....+..+.........+.. .+...+|+.+||..+|.+||+ +.|+++||||+..
T Consensus 184 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 184 ELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred HHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 9999 665544 122333333322222222222 345569999999999999999 9999999999864
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-30 Score=267.46 Aligned_cols=211 Identities=18% Similarity=0.201 Sum_probs=159.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++.... ...++++||| .+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ 126 (266)
T cd06651 50 ALECEIQLLKNLQHERIVQYYG-CLRDRA-EKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNM 126 (266)
T ss_pred HHHHHHHHHHHcCCCCeeeEEE-EEEcCC-CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4557788999999999999999 443322 2367899999 8899999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++........ .+.
T Consensus 127 i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------~~~----------- 164 (266)
T cd06651 127 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM-------------------------------SGT----------- 164 (266)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCCCccccccccc-------------------------------cCC-----------
Confidence 99999999999999999999999888733210000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~ 199 (266)
T cd06651 165 ---------------------------------------------GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTV 199 (266)
T ss_pred ---------------------------------------------ccccCCccccccCHHHhCCCCCCchhhhHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||++ ||.......... .+......+.+....+.. .+|+ +||..+|++||+++|+++||||+
T Consensus 200 ~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 200 VEMLTEKPPWAEYEAMAAIF-KIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHCCCCccccchHHHHH-HHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 99999 565443333332 222222233333333333 4676 67788999999999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-30 Score=271.06 Aligned_cols=215 Identities=17% Similarity=0.248 Sum_probs=157.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC-----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA-----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~-----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+..+|..++++++||||+++++ ++.... .....+++|||.+++|.+++......+++.+++.++.||+.||.||
T Consensus 57 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~l 135 (310)
T cd07865 57 TALREIKILQLLKHENVVNLIE-ICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYI 135 (310)
T ss_pred HHHHHHHHHHhCCCCCccceEE-EEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 3346788999999999999999 443332 2245799999977899999866555699999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+|+||||+||+++.++.++|+|||.+......... .
T Consensus 136 H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~------- 176 (310)
T cd07865 136 HRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNS--------------------------------K------- 176 (310)
T ss_pred HHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCccc--------------------------------C-------
Confidence 9999999999999999999999999999887432111000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwS 296 (720)
+.......++..|+|||.+.+.. ++.++||||
T Consensus 177 -----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 209 (310)
T cd07865 177 -----------------------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWG 209 (310)
T ss_pred -----------------------------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHH
Confidence 00000135688999999987654 789999999
Q ss_pred hhchhhhccc---cCCCCchHH--HHHHHhhcCCCCcc--------------------------cc--ccCchHHHHHHH
Q 004989 297 LGVLLFELFC---PFSTGEEKT--RTMSSLRHRVLPPQ--------------------------LL--LKFPKEASFCLW 343 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~--~~~~~l~~~~~p~~--------------------------~~--~~~p~~~~Li~~ 343 (720)
|||++|||++ ||....... .....+.....++. +. ...+...+||.+
T Consensus 210 lG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~ 289 (310)
T cd07865 210 AGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDK 289 (310)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHH
Confidence 9999999998 454433221 11111111111000 00 012345589999
Q ss_pred cCCCCCCCCCChHHHHcCccc
Q 004989 344 LLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||..||.+|||++|+|+||||
T Consensus 290 ~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 290 LLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HhcCChhhccCHHHHhcCCCC
Confidence 999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=267.28 Aligned_cols=203 Identities=14% Similarity=0.176 Sum_probs=156.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++......+++..++.++.||+.||+|||++|
T Consensus 52 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ 127 (266)
T cd05064 52 GFLAEALTLGQFDHSNIVRLEG-VITRGN---TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG 127 (266)
T ss_pred HHHHHHHHHhcCCCCCcCeEEE-EEecCC---CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4557888999999999999999 444433 57999999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||.+....... .
T Consensus 128 iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~----------------------------------~----------- 162 (266)
T cd05064 128 YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA----------------------------------I----------- 162 (266)
T ss_pred EeeccccHhhEEEcCCCcEEECCCcccccccccc----------------------------------h-----------
Confidence 9999999999999999999999888652210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||.+.+..++.++|||||||++
T Consensus 163 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 198 (266)
T cd05064 163 -------------------------Y-------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVM 198 (266)
T ss_pred -------------------------h-------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHH
Confidence 0 00002346789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++. +..+| ...+++..||.++|.+||++.+|++
T Consensus 199 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 199 WEVMSYGERPYWDMSGQ-DVIKAVEDGFRLPA-PRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHhcCCCCCcCcCCHH-HHHHHHHCCCCCCC-CCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 99775 66554433 33444444433332 33344 4459999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-31 Score=301.39 Aligned_cols=236 Identities=18% Similarity=0.223 Sum_probs=180.1
Q ss_pred ccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 58 NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 58 ~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+..-||+||+ +|...+.++|++++. .|+++. ++|+|||| +||+|..+|.+.+ .+|+.-++.|+..|+.||+-
T Consensus 118 ~tA~F~EERD--imv~~ns~Wiv~Lhy-AFQD~~---~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAlds 190 (1317)
T KOG0612|consen 118 ETACFREERD--IMVFGNSEWIVQLHY-AFQDER---YLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDS 190 (1317)
T ss_pred hHHHHHHHhH--HHHcCCcHHHHHHHH-HhcCcc---ceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHH
Confidence 4567788888 666778999999998 677775 67999999 9999999997777 69999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+.|+|||||||+||||+..|++||+|||.|-..+.+ |.+
T Consensus 191 lH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d------------------------------------G~V--- 231 (1317)
T KOG0612|consen 191 LHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD------------------------------------GTV--- 231 (1317)
T ss_pred HHhccceeccCCcceeEecccCcEeeccchhHHhcCCC------------------------------------CcE---
Confidence 99999999999999999999999999999999443322 111
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCcc
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCA 291 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~ 291 (720)
.....+|||.|++||++.. +.|++.
T Consensus 232 --------------------------------------------------~s~~aVGTPDYISPEvLqs~~~~~g~yG~e 261 (1317)
T KOG0612|consen 232 --------------------------------------------------RSSVAVGTPDYISPEVLQSQGDGKGEYGRE 261 (1317)
T ss_pred --------------------------------------------------EeccccCCCCccCHHHHHhhcCCccccCCc
Confidence 1122589999999999952 349999
Q ss_pred ccchhhhchhhhccc---cCCCCchHHHHHHHhh-c---CCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcC
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR-H---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQS 361 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~-~---~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt---a~eiL~h 361 (720)
+|+|||||++|||++ ||....-. .++..|. + -.+|+. ....+...+||.++| -+|+.|.. +++|..|
T Consensus 262 cDwWSlGV~~YEMlyG~TPFYadslv-eTY~KIm~hk~~l~FP~~-~~VSeeakdLI~~ll-~~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 262 CDWWSLGVFMYEMLYGETPFYADSLV-ETYGKIMNHKESLSFPDE-TDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNH 338 (1317)
T ss_pred cchhhhHHHHHHHHcCCCcchHHHHH-HHHHHHhchhhhcCCCcc-cccCHHHHHHHHHHh-cChhhhcccccHHHHHhC
Confidence 999999999999998 88876544 3333333 3 234522 233344459999988 57888886 9999999
Q ss_pred cccCCCccchHHHHHHHHHhhhhhhHHHHHHH
Q 004989 362 EFLNEPRDSMEEREAAIELREQIDEEELLLEF 393 (720)
Q Consensus 362 p~~~~~~~~l~e~~~~~~~~e~~~~~e~L~~f 393 (720)
|||.+..- -.-++..+|+.+..........|
T Consensus 339 pFF~g~~W-~~iR~~~pP~vPevssd~DTsnF 369 (1317)
T KOG0612|consen 339 PFFEGIDW-DNIRESVPPVVPEVSSDDDTSNF 369 (1317)
T ss_pred ccccCCCh-hhhhhcCCCCCCcCCCCCccccc
Confidence 99998733 22234455555544443344444
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=268.00 Aligned_cols=211 Identities=17% Similarity=0.210 Sum_probs=160.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+++.++||||+++++ .+..+. .+|++||| .|++|..++.+....+++..++.++.||+.+|.|||++||+
T Consensus 57 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~ 132 (292)
T cd06644 57 MVEIEILATCNHPYIVKLLG-AFYWDG---KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKII 132 (292)
T ss_pred HHHHHHHHhCCCCcEeeeEE-EEEeCC---eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 36777899999999999999 444332 57999999 89999988865555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.......
T Consensus 133 H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~------------------------------------------------ 164 (292)
T cd06644 133 HRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL------------------------------------------------ 164 (292)
T ss_pred ecCCCcceEEEcCCCCEEEccCccceeccccc------------------------------------------------
Confidence 99999999999999999999998763211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLG 298 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLG 298 (720)
.......+++.|+|||.+.+ ..++.++||||||
T Consensus 165 ------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 202 (292)
T cd06644 165 ------------------------------------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 202 (292)
T ss_pred ------------------------------------------cccceecCCccccCceeeccccccCCCCCchhhhHhHH
Confidence 00001357889999999853 3478899999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|||++ ||...... .....+.....+. .....+ .+..+|+.+||..+|++||++.++++||||......
T Consensus 203 ~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 278 (292)
T cd06644 203 ITLIEMAQIEPPHHELNPM-RVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSN 278 (292)
T ss_pred HHHHHHhcCCCCCccccHH-HHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence 99999999 55443332 2233333222221 112223 355699999999999999999999999999876443
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-30 Score=267.54 Aligned_cols=209 Identities=20% Similarity=0.254 Sum_probs=161.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ .+.... .+|++||| .+++|.+++.+....+++..++.++.||+.||.|||++||
T Consensus 49 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i 124 (280)
T cd06611 49 FMVEIDILSECKHPNIVGLYE-AYFYEN---KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV 124 (280)
T ss_pred HHHHHHHHHhCCCCceeEEEE-EEecCC---eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777999999999999999 444433 57999999 8999999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+.......
T Consensus 125 ~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------------------- 157 (280)
T cd06611 125 IHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL----------------------------------------------- 157 (280)
T ss_pred ccCCCChhhEEECCCCCEEEccCccchhhcccc-----------------------------------------------
Confidence 999999999999999999999988763211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRL 297 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSL 297 (720)
.......|++.|+|||++. ...++.++|||||
T Consensus 158 -------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~sl 194 (280)
T cd06611 158 -------------------------------------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSL 194 (280)
T ss_pred -------------------------------------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHH
Confidence 0001135789999999985 2347889999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|||++ ||...... ..+..+.....+. .....+ +...+|+.+||+.+|.+||++.++|+||||...
T Consensus 195 G~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 195 GITLIELAQMEPPHHELNPM-RVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHHHHHHHhCCCCcccCCHH-HHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 999999999 55544333 3333333332221 112223 345599999999999999999999999999886
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-30 Score=266.17 Aligned_cols=209 Identities=16% Similarity=0.214 Sum_probs=155.8
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCC--CCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAA--IDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~--~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..|..++.++ +||||+++++.+...... ...+|++||| .+++|.+++.. ....+++..++.++.||+.||+|||+
T Consensus 50 ~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~ 129 (272)
T cd06637 50 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 129 (272)
T ss_pred HHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3566677777 799999999944433221 2358999999 88999999954 33458999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+|+||||+||+++.++.++|+|||++...... .+
T Consensus 130 ~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~-----------------------------------~~-------- 166 (272)
T cd06637 130 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-----------------------------------VG-------- 166 (272)
T ss_pred CCCccCCCCHHHEEECCCCCEEEccCCCceecccc-----------------------------------cc--------
Confidence 99999999999999999999999999887322100 00
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDI 294 (720)
......|++.|+|||++.+ ..++.++||
T Consensus 167 -----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv 199 (272)
T cd06637 167 -----------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDL 199 (272)
T ss_pred -----------------------------------------------cCCcccccccccCHhHhccccCcCCCCCchhhH
Confidence 0011467899999999863 348889999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||++|||++ ||.............. ...+......++ ...+|+.+||..+|.+|||+.+++.||||
T Consensus 200 ~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 200 WSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHHHHHHHHhCCCCccccCHHHHHHHHhc-CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 999999999999 5544333322222221 111111222333 44599999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-30 Score=265.77 Aligned_cols=204 Identities=18% Similarity=0.250 Sum_probs=156.0
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.... .+|++||| .+++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 54 ~~e~~~~~~l~h~~ii~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~ 128 (267)
T cd06645 54 QQEIIMMKDCKHSNIVAYFG-SYLRRD---KLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKGKM 128 (267)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEEeCC---EEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 46778899999999999999 444432 57999999 8899999985544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 129 H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 161 (267)
T cd06645 129 HRDIKGANILLTDNGHVKLADFGVSAQITATIA----------------------------------------------- 161 (267)
T ss_pred cCCCCHHHEEECCCCCEEECcceeeeEccCccc-----------------------------------------------
Confidence 999999999999999999999988733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhhch
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+. ...++.++|||||||+
T Consensus 162 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~i 198 (267)
T cd06645 162 -------------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGIT 198 (267)
T ss_pred -------------------------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHH
Confidence 000136789999999984 4448899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc--cCc-hHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFP-KEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+|+|++ ||..................++.+.. .++ ...+|+.+||..+|++||++.++++|||
T Consensus 199 l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 199 AIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 999999 55443332222222222222222221 233 4459999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-30 Score=291.84 Aligned_cols=211 Identities=15% Similarity=0.135 Sum_probs=155.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.++|..+|.+++|||||++++ ++.... ..|+++|+.+++|.+++... .......+++.|+.||+.||.|||+
T Consensus 210 ~~~Ei~il~~l~HpnIv~l~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~ 285 (501)
T PHA03210 210 LENEILALGRLNHENILKIEE-ILRSEA---NTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD 285 (501)
T ss_pred HHHHHHHHHhCCCCCcCcEeE-EEEECC---eeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence 347888999999999999999 555544 46899999778899888332 1223467788999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.++.+||+|||++..+......
T Consensus 286 ~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~------------------------------------------ 323 (501)
T PHA03210 286 KKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA------------------------------------------ 323 (501)
T ss_pred CCeecCCCCHHHEEECCCCCEEEEeCCCceecCccccc------------------------------------------
Confidence 99999999999999999999999999988443211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..++.++|||||||
T Consensus 324 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 356 (501)
T PHA03210 324 -----------------------------------------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGL 356 (501)
T ss_pred -----------------------------------------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHH
Confidence 001147899999999999988999999999999
Q ss_pred hhhhccc----cCCCC--chHHHHHHHhhc-----CCCCc-----------------------ccc--ccCchHHHHHHH
Q 004989 300 LLFELFC----PFSTG--EEKTRTMSSLRH-----RVLPP-----------------------QLL--LKFPKEASFCLW 343 (720)
Q Consensus 300 ll~eLlt----pf~~~--~~~~~~~~~l~~-----~~~p~-----------------------~~~--~~~p~~~~Li~~ 343 (720)
++|||++ ||... .........+.. ..+|. .+. ...++..++|.+
T Consensus 357 il~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~k 436 (501)
T PHA03210 357 ILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVK 436 (501)
T ss_pred HHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHH
Confidence 9999998 33221 111122221111 00110 000 011233478999
Q ss_pred cCCCCCCCCCChHHHHcCcccCCC
Q 004989 344 LLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++||.+|||+.|+|+||||...
T Consensus 437 mL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 437 MLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HhccCcccCcCHHHHhhChhhhcC
Confidence 999999999999999999999875
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=265.52 Aligned_cols=205 Identities=18% Similarity=0.272 Sum_probs=152.3
Q ss_pred hhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.++. ||||+++++ ++.+... ..++++|||.+++|.+++......+++.+++.++.||+.||.|||+.||+
T Consensus 45 ~~e~~~l~~l~~h~~i~~~~~-~~~~~~~-~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~ 122 (282)
T cd07831 45 LREIQALRRLSPHPNILRLIE-VLFDRKT-GRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIF 122 (282)
T ss_pred HHHHHHHhhcCCCCCccceEE-EEecCCC-CcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 35666777775 999999999 4544422 25799999966799999865445689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++. +.++|+|||.+....... .+
T Consensus 123 H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~---------------------------------~~------------- 155 (282)
T cd07831 123 HRDIKPENILIKD-DILKLADFGSCRGIYSKP---------------------------------PY------------- 155 (282)
T ss_pred ecccCHHHEEEcC-CCeEEEecccccccccCC---------------------------------Cc-------------
Confidence 9999999999999 999999998874321100 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~ 302 (720)
....+++.|+|||++.. ..++.++|||||||++|
T Consensus 156 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~ 190 (282)
T cd07831 156 ---------------------------------------------TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFF 190 (282)
T ss_pred ---------------------------------------------CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHH
Confidence 01356889999998755 44789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--------------------CCCCcc--------ccccCchHHHHHHHcCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH--------------------RVLPPQ--------LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--------------------~~~p~~--------~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
||++ ||...+.... ...+.. ...++. .........+||.+||.++|++
T Consensus 191 el~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 269 (282)
T cd07831 191 EILSLFPLFPGTNELDQ-IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDE 269 (282)
T ss_pred HHHcCCcCCCCCCHHHH-HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCccc
Confidence 9998 5654433211 111110 001110 0111234459999999999999
Q ss_pred CCChHHHHcCccc
Q 004989 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
||++.++++||||
T Consensus 270 R~~~~~~l~~~~~ 282 (282)
T cd07831 270 RITAKQALRHPYF 282 (282)
T ss_pred ccCHHHHhhCCCC
Confidence 9999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-30 Score=269.18 Aligned_cols=207 Identities=18% Similarity=0.252 Sum_probs=160.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++|+||+.+++ .+..+. .+|++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 48 ~~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 123 (285)
T cd05632 48 LNEKQILEKVNSQFVVNLAY-AYETKD---ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT 123 (285)
T ss_pred HHHHHHHHHcCCcCceeEEE-EEecCC---EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 46778999999999999988 444433 57999999 88999998843 33459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++.......
T Consensus 124 iH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 156 (285)
T cd05632 124 VYRDLKPENILLDDYGHIRISDLGLAVKIPEGE----------------------------------------------- 156 (285)
T ss_pred eecCCCHHHEEECCCCCEEEecCCcceecCCCC-----------------------------------------------
Confidence 999999999999999999999998763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 157 --------------------------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~ 192 (285)
T cd05632 157 --------------------------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIY 192 (285)
T ss_pred --------------------------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHH
Confidence 000136799999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCC--CccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||........ ...+..... ...+.... +...+|+.+||..||++||+ +.+++.|+||...
T Consensus 193 ~l~~g~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 193 EMIEGQSPFRGRKEKVK-REEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHHhCCCCCCCCCHHHH-HHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 9999 6655433211 111111111 11222233 34569999999999999999 8899999999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-30 Score=277.41 Aligned_cols=224 Identities=17% Similarity=0.205 Sum_probs=163.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++.+.........+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 50 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~i 128 (334)
T cd07855 50 RTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSANV 128 (334)
T ss_pred HHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 34467889999999999999994433333445689999996679999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+......... .
T Consensus 129 vH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------~------------- 164 (334)
T cd07855 129 IHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE-------------------------------H------------- 164 (334)
T ss_pred ecCCCCHHHEEEcCCCcEEecccccceeecccCcC-------------------------------C-------------
Confidence 99999999999999999999999887432111000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll 301 (720)
.......+|+.+|+|||.+.+ ..++.++|||||||++
T Consensus 165 ------------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l 202 (334)
T cd07855 165 ------------------------------------------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIF 202 (334)
T ss_pred ------------------------------------------CcccccccccccccChHHhcCCcccccccchHHHHHHH
Confidence 000011467899999999866 3489999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc-CC--------------------CC---c----cc-cccCchHHHHHHHcCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH-RV--------------------LP---P----QL-LLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~-~~--------------------~p---~----~~-~~~~p~~~~Li~~~L~~dP 349 (720)
|||++ ||............... +. ++ + .+ ....+...+||.+||+.+|
T Consensus 203 ~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 282 (334)
T cd07855 203 AEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDP 282 (334)
T ss_pred HHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCCh
Confidence 99998 56543322111000000 00 00 0 00 1123445599999999999
Q ss_pred CCCCChHHHHcCcccCCCccchHH
Q 004989 350 SGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
.+||++.++++||||.+...+..+
T Consensus 283 ~~Rpt~~~~l~~~~~~~~~~~~~~ 306 (334)
T cd07855 283 EERITVEQALQHPFLAQYHDPDDE 306 (334)
T ss_pred hhCcCHHHHHhChhhhhccCCccc
Confidence 999999999999999887554443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=263.12 Aligned_cols=209 Identities=20% Similarity=0.294 Sum_probs=163.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..+++.++||||+++++.+. ... ...+|++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~-~~~-~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 45 QLVSEVNILRELKHPNIVRYYDRII-DRS-NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred HHHHHHHHHHhcCCCccceeeeeee-cCC-CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 4446788999999999999998333 222 2357999999 89999999943 2456899999999999999999999
Q ss_pred -----HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 139 -----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 -----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
+.+|+|+||||+||+++.++.++|+|||.+....... .+
T Consensus 123 ~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---------------------------------~~--- 166 (265)
T cd08217 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS---------------------------------SF--- 166 (265)
T ss_pred cCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc---------------------------------cc---
Confidence 9999999999999999999999999998874332110 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.....|++.|+|||.+.+..++.++|
T Consensus 167 ------------------------------------------------------~~~~~~~~~~~~pE~~~~~~~~~~~D 192 (265)
T cd08217 167 ------------------------------------------------------AKTYVGTPYYMSPEQLNHMSYDEKSD 192 (265)
T ss_pred ------------------------------------------------------ccccccCCCccChhhhcCCCCCchhH
Confidence 00135788999999998888999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+||||+++|+|++ ||.... .......+..+..++......+...+|+.+||..+|.+||++.+|++|||+
T Consensus 193 v~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 193 IWSLGCLIYELCALSPPFTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHHHHHHHHCCCcccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 9999999999999 555543 234444455444433222233455599999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=266.66 Aligned_cols=208 Identities=18% Similarity=0.243 Sum_probs=156.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++++++||||+++++ ++.+.. ..+++|||..++|.+++.. ....+++..++.++.||+.||+|||+.|
T Consensus 45 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 45 TAIREISLLKELNHPNIVKLLD-VIHTEN---KLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred HHHHHHHHHHhcCCCCCcchhh-hcccCC---cEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446788999999999999999 444433 5799999966789999843 3455899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+...+....
T Consensus 121 i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 155 (284)
T cd07860 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--------------------------------------------- 155 (284)
T ss_pred eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc---------------------------------------------
Confidence 99999999999999999999999988743221100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......+++.|+|||.+.+.. ++.++|||||||+
T Consensus 156 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i 190 (284)
T cd07860 156 ---------------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 190 (284)
T ss_pred ---------------------------------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHH
Confidence 000124688999999987755 6889999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc--------------------------c-ccccCchHHHHHHHcCCCCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP--------------------------Q-LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~--------------------------~-~~~~~p~~~~Li~~~L~~dP~ 350 (720)
+|||++ ||............+.....++ . .....+...+||.+||+.||.
T Consensus 191 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 270 (284)
T cd07860 191 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPN 270 (284)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcc
Confidence 999999 5655443322222221110000 0 011223445899999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||+++++.||||
T Consensus 271 ~Rpt~~~~l~~~~f 284 (284)
T cd07860 271 KRISAKAALAHPFF 284 (284)
T ss_pred cCCCHHHHhcCCCC
Confidence 99999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-30 Score=275.07 Aligned_cols=205 Identities=18% Similarity=0.235 Sum_probs=156.5
Q ss_pred hhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+. ||+|+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 49 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~iv 123 (323)
T cd05615 49 VEKRVLALQDKPPFLTQLHS-CFQTVD---RLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRRGII 123 (323)
T ss_pred HHHHHHHhccCCCchhheee-EEecCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4555666665 566777887 555543 58999999 8999999995544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++........
T Consensus 124 HrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~----------------------------------------------- 156 (323)
T cd05615 124 YRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV----------------------------------------------- 156 (323)
T ss_pred ccCCCHHHeEECCCCCEEEeccccccccCCCCc-----------------------------------------------
Confidence 999999999999999999999988732110000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (323)
T cd05615 157 -------------------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE 193 (323)
T ss_pred -------------------------------------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 0001368999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ......+...+|+.+||+.+|.+|++ ..++++||||...
T Consensus 194 lltG~~pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 194 MLAGQPPFDGEDED-ELFQSIMEHNVS-YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 999 66655443 233333322211 11122345569999999999999997 4789999999875
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=277.15 Aligned_cols=212 Identities=19% Similarity=0.212 Sum_probs=157.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... .....|+||||.+++|.+++... +++..+..++.||+.||.|||+
T Consensus 61 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~ 136 (353)
T cd07850 61 RAYRELVLMKLVNHKNIIGLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHS 136 (353)
T ss_pred HHHHHHHHHHhcCCCCCcceee-eeccCCCccccCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHh
Confidence 3346788999999999999999 443322 22357999999777999988432 8999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.++|+|||.+...+...
T Consensus 137 ~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-------------------------------------------- 172 (353)
T cd07850 137 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 172 (353)
T ss_pred CCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC--------------------------------------------
Confidence 999999999999999999999999998873321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......+++.|+|||.+.+..++.++|||||||
T Consensus 173 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~ 205 (353)
T cd07850 173 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 205 (353)
T ss_pred -----------------------------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHH
Confidence 000135688999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC--------------------------------Cccc--------cccCc-
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL--------------------------------PPQL--------LLKFP- 335 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~--------------------------------p~~~--------~~~~p- 335 (720)
++|+|++ ||...+........+..... +... ....+
T Consensus 206 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (353)
T cd07850 206 IMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKAS 285 (353)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchh
Confidence 9999999 56544322111111100000 0000 00112
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
...+||.+||++||++|||+.|+|+||||.....
T Consensus 286 ~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 286 QARDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319 (353)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence 2459999999999999999999999999875433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=262.48 Aligned_cols=205 Identities=16% Similarity=0.196 Sum_probs=158.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+++.++||||+++++ .+... ..+|+++|| .+++|.+++......+++..++.++.||+.||.|||+.||+
T Consensus 46 ~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~ 121 (256)
T cd06612 46 IKEISILKQCDSPYIVKYYG-SYFKN---TDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKI 121 (256)
T ss_pred HHHHHHHHhCCCCcEeeeee-eeecC---CcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36667889999999999999 44444 368999999 88999999966566799999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++|+|||.+........
T Consensus 122 H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 154 (256)
T cd06612 122 HRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA----------------------------------------------- 154 (256)
T ss_pred cCCCCcceEEECCCCcEEEcccccchhcccCcc-----------------------------------------------
Confidence 999999999999999999999888733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 155 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~ 191 (256)
T cd06612 155 -------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIE 191 (256)
T ss_pred -------------------------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHH
Confidence 0001356888999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++ ||......... ..+.....+. .....+ +...+|+.+||+.+|.+|||+.|+|+||||
T Consensus 192 l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 192 MAEGKPPYSDIHPMRAI-FMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHhCCCCCCCcchhhhh-hhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 999 55443332222 1221111111 111122 345699999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=266.44 Aligned_cols=207 Identities=18% Similarity=0.182 Sum_probs=158.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+|.+++||||+++++ .+.... ..+++||| .+++|..+. .+++..+..++.||+.||.|||+.||+
T Consensus 47 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~ 117 (279)
T cd06619 47 MSELEILYKCDSPYIIGFYG-AFFVEN---RISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKIL 117 (279)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEEECC---EEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 36777899999999999999 554443 57899999 888887643 378999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||++......
T Consensus 118 H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~------------------------------------------------- 148 (279)
T cd06619 118 HRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS------------------------------------------------- 148 (279)
T ss_pred eCCCCHHHEEECCCCCEEEeeCCcceecccc-------------------------------------------------
Confidence 9999999999999999999999887322100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||.+.+..++.++|||||||++|+
T Consensus 149 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~ 185 (279)
T cd06619 149 -------------------------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFME 185 (279)
T ss_pred -------------------------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHH
Confidence 0001367899999999998889999999999999999
Q ss_pred ccc---cCCCCch------HHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchH
Q 004989 304 LFC---PFSTGEE------KTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 304 Llt---pf~~~~~------~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
|++ ||..... .......+.....+..... ..+...+|+.+||+.+|.+||+++|+++||||........
T Consensus 186 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~ 264 (279)
T cd06619 186 LALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA 264 (279)
T ss_pred HHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence 999 5543211 1112222222222221112 2345669999999999999999999999999988744433
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=271.28 Aligned_cols=208 Identities=20% Similarity=0.258 Sum_probs=166.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..||..++.|.||.+-. .|++.+ .+|+||.. .||+|.-+|.+ .++.+++..++.|+.+|+.||.+||..+||
T Consensus 234 nEk~iL~kV~s~FiVslaY-AfeTkd---~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iV 309 (591)
T KOG0986|consen 234 NEKQILEKVSSPFIVSLAY-AFETKD---ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIV 309 (591)
T ss_pred HHHHHHHHhccCcEEEEee-eecCCC---ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhccee
Confidence 6788999999999999987 666665 56999999 99999988844 345699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
.|||||+|||+|+.|+|+|.|+|+|.++....
T Consensus 310 YRDLKPeNILLDd~GhvRISDLGLAvei~~g~------------------------------------------------ 341 (591)
T KOG0986|consen 310 YRDLKPENILLDDHGHVRISDLGLAVEIPEGK------------------------------------------------ 341 (591)
T ss_pred eccCChhheeeccCCCeEeeccceEEecCCCC------------------------------------------------
Confidence 99999999999999999999999985431110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
|. ...+||.+|||||++.+..|+++.|+|||||+|||
T Consensus 342 -----------------------------------------~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYe 378 (591)
T KOG0986|consen 342 -----------------------------------------PI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYE 378 (591)
T ss_pred -----------------------------------------cc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHH
Confidence 00 11489999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCC--CCccccccCchHH-HHHHHcCCCCCCCCC-----ChHHHHcCcccCCCcc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEA-SFCLWLLHPEPSGRP-----KMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~-~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~~ 369 (720)
|+. ||....+.. -...+.+++ -+..+....++++ +||..+|+.||++|. .+.++.+||||+...-
T Consensus 379 mi~G~sPFr~~KeKv-k~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 379 MIAGHSPFRQRKEKV-KREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred HHcccCchhhhhhhh-hHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 998 665443321 111222222 2334445555555 999999999999996 6889999999998733
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=266.38 Aligned_cols=207 Identities=17% Similarity=0.202 Sum_probs=162.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+...|..++..++||||+++++ ++.+.. ..|++|||..++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 67 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi 142 (313)
T cd06633 67 DIIKEVKFLQQLKHPNTIEYKG-CYLKEH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM 142 (313)
T ss_pred HHHHHHHHHHhCCCCCCccEEE-EEEeCC---EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3446788999999999999999 555443 579999996678988886655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.++|+|||.+......
T Consensus 143 ~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~------------------------------------------------ 174 (313)
T cd06633 143 IHRDIKAGNILLTEPGQVKLADFGSASKSSPA------------------------------------------------ 174 (313)
T ss_pred ecCCCChhhEEECCCCCEEEeecCCCcccCCC------------------------------------------------
Confidence 99999999999999999999998876211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhhc
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGv 299 (720)
....|+..|+|||++. ...++.++|||||||
T Consensus 175 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGv 208 (313)
T cd06633 175 ----------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 208 (313)
T ss_pred ----------------------------------------------CCccccccccChhhccccCCCCCCchhhHHHHHH
Confidence 0135788999999984 345889999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|+|++ ||.......... .+.....+......++ ...+|+.+||+++|.+||++.+++.||||....
T Consensus 209 il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 209 TCIELAERKPPLFNMNAMSALY-HIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHhCCCCCCCCChHHHHH-HHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 9999998 555544333332 2332333333333344 356999999999999999999999999999753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=271.22 Aligned_cols=206 Identities=19% Similarity=0.200 Sum_probs=157.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
..+|..++.+++||||+++++ .+..+. .+|++||| .|++|.+++.+. ..+++..+..++.||+.||.|||+ .+
T Consensus 46 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ 120 (308)
T cd06615 46 IIRELKVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHK 120 (308)
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEeeCC---EEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 347888999999999999999 554443 67999999 899999999654 448999999999999999999997 69
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||||+|||++.++.++|+|||.+......
T Consensus 121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----------------------------------------------- 153 (308)
T cd06615 121 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----------------------------------------------- 153 (308)
T ss_pred EEECCCChHHEEEecCCcEEEccCCCccccccc-----------------------------------------------
Confidence 999999999999999999999988876221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 154 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l 188 (308)
T cd06615 154 ---------------------------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSL 188 (308)
T ss_pred ---------------------------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHH
Confidence 00013678999999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC-----------------------------------CCCccccc--cCchHHHHH
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHR-----------------------------------VLPPQLLL--KFPKEASFC 341 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~-----------------------------------~~p~~~~~--~~p~~~~Li 341 (720)
|+|++ ||...... .....+... ..++..+. ..+...+|+
T Consensus 189 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 267 (308)
T cd06615 189 VEMAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFV 267 (308)
T ss_pred HHHHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHH
Confidence 99999 55433211 111111100 00111110 123456999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+||..+|++|||+.++++||||...
T Consensus 268 ~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 268 DKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHccCChhhCcCHHHHhcChhhhhc
Confidence 99999999999999999999999764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-30 Score=260.06 Aligned_cols=220 Identities=16% Similarity=0.212 Sum_probs=165.1
Q ss_pred chhhchhhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 60 ~~~r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
++-|..||..++.+ -.|+||++|++ ||+++. .||+|||- .||+|...|.+.. .+++.++..+++.|+.||+||
T Consensus 118 sR~RvfREVe~f~~Cqgh~nilqLie-fFEdd~---~FYLVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFl 192 (463)
T KOG0607|consen 118 SRSRVFREVETFYQCQGHKNILQLIE-FFEDDT---RFYLVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFL 192 (463)
T ss_pred HHHHHHHHHHHHHHhcCCccHHHHHH-Hhcccc---eEEEEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHH
Confidence 33355577778777 56999999999 887775 68999999 9999999995544 399999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|.+||.||||||+|||-...++ ||||||.+.+..... .|..++.
T Consensus 193 H~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~---------------------------------~~~spas 239 (463)
T KOG0607|consen 193 HTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN---------------------------------NDCSPAS 239 (463)
T ss_pred hhcCcccccCCccceeecCCCCcCceeeeccccccccccC---------------------------------CCCCCCC
Confidence 9999999999999999986654 788888765321000 1111110
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CC--CCC
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GA--PVS 289 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~--~~s 289 (720)
+ ......+|+..|||||+.. +. .|+
T Consensus 240 t--------------------------------------------------P~L~tPvGSAEfMAPEVVd~fv~qA~~YD 269 (463)
T KOG0607|consen 240 T--------------------------------------------------PELLTPVGSAEFMAPEVVDVFVDQATFYD 269 (463)
T ss_pred C--------------------------------------------------ccccCcccchhhcchhHHhhhcccccccc
Confidence 0 0112358999999999863 22 289
Q ss_pred ccccchhhhchhhhccccCCCCc------------h-----HHHHHHHhhcC--CCCccccccCchHH-HHHHHcCCCCC
Q 004989 290 CASDIYRLGVLLFELFCPFSTGE------------E-----KTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEP 349 (720)
Q Consensus 290 ~~sDIwSLGvll~eLltpf~~~~------------~-----~~~~~~~l~~~--~~p~~~~~~~p~~~-~Li~~~L~~dP 349 (720)
.+.|.||||||||-||++|.++. + ....+..|..+ .+|..-+...+.++ +++..+|..+|
T Consensus 270 KrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda 349 (463)
T KOG0607|consen 270 KRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDA 349 (463)
T ss_pred ccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccH
Confidence 99999999999999999443321 0 12334445543 45665555555555 99999999999
Q ss_pred CCCCChHHHHcCcccCCC
Q 004989 350 SGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~ 367 (720)
.+|.++.++++|||++..
T Consensus 350 ~~rlsa~~vlnhPw~~~~ 367 (463)
T KOG0607|consen 350 KQRLSAAQVLNHPWVQRC 367 (463)
T ss_pred HhhhhhhhccCCcccccc
Confidence 999999999999999986
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-31 Score=271.41 Aligned_cols=204 Identities=25% Similarity=0.363 Sum_probs=157.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++.+++||||+++++ ++.... .++++||+ .+++|.++|.+ ...+++.+++.++.||+.||.+||+.||+|
T Consensus 47 ~e~~~~~~l~~~~i~~~~~-~~~~~~---~~~~v~~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H 121 (260)
T PF00069_consen 47 REIKILRRLRHPNIVQILD-VFQDDN---YLYIVMEYCPGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSKGIVH 121 (260)
T ss_dssp HHHHHHHHHTBTTBCHEEE-EEEESS---EEEEEEEEETTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred hhhhccccccccccccccc-cccccc---cccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 5788999999999999999 554432 57899999 77799999962 334899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+...... .
T Consensus 122 ~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~-----------------------------------~-------------- 152 (260)
T PF00069_consen 122 RDIKPENILLDENGEVKLIDFGSSVKLSEN-----------------------------------N-------------- 152 (260)
T ss_dssp SSBSGGGEEESTTSEEEESSGTTTEESTST-----------------------------------T--------------
T ss_pred cccccccccccccccccccccccccccccc-----------------------------------c--------------
Confidence 999999999999999999999887321000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-CCCCCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDIwSLGvll~e 303 (720)
.......+++.|+|||++. +..++.++||||||+++|+
T Consensus 153 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 191 (260)
T PF00069_consen 153 -----------------------------------------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYE 191 (260)
T ss_dssp -----------------------------------------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccccccccccccccccccccccccccccccccc
Confidence 0001146799999999998 7779999999999999999
Q ss_pred ccc---cCCCCc--hHHHHHHHhhcCCCCcccccc---CchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 304 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLLK---FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~--~~~~~~~~l~~~~~p~~~~~~---~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++ ||.... ..............+...... .+...+++.+||+.||++||++.++++||||
T Consensus 192 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 192 LLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999 666541 122222222222121111111 1455699999999999999999999999997
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=269.49 Aligned_cols=210 Identities=15% Similarity=0.184 Sum_probs=162.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ .+..+. ..|+|||| .|++|.+++... .+++.++..++.||+.||.|||+.||
T Consensus 64 ~~~e~~~l~~~~h~~v~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi 137 (296)
T cd06654 64 IINEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQV 137 (296)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEEeCC---EEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 336677889999999999999 444433 68999999 899999998543 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... .
T Consensus 138 ~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------------------------~------------- 171 (296)
T cd06654 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------------------------S------------- 171 (296)
T ss_pred ccCCCCHHHEEEcCCCCEEECccccchhccccc---------------------------------c-------------
Confidence 999999999999999999999988763211000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 172 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ 207 (296)
T cd06654 172 --------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 207 (296)
T ss_pred --------------------------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHH
Confidence 000135788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||..................+....... +...+|+.+||.++|.+|||+.++++||||.....
T Consensus 208 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 208 EMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred HHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 9999 6655444333222222222221222223 34569999999999999999999999999987633
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=265.92 Aligned_cols=210 Identities=19% Similarity=0.259 Sum_probs=157.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...+|..++.+++||||+++++ ++..+. .+|+||||.+++|.+++......+++.+++.++.||+.||.|||+.||
T Consensus 45 ~~~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 120 (286)
T cd07832 45 QALREIKALQACQHPYVVKLLD-VFPHGS---GFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120 (286)
T ss_pred HHHHHHHHHHhCCCCCCcceee-EEecCC---eeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3446777999999999999999 444433 679999999999999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+........ .
T Consensus 121 ~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-------------------------------~-------------- 155 (286)
T cd07832 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEP-------------------------------R-------------- 155 (286)
T ss_pred ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-------------------------------C--------------
Confidence 9999999999999999999999988743211100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......|+.+|+|||.+.+.. ++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 191 (286)
T cd07832 156 --------------------------------------------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIF 191 (286)
T ss_pred --------------------------------------------ccccccCcccccCceeeeccccCCchhHHHHHHHHH
Confidence 000135789999999987654 68999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC--------------------CCCc-------cc-cccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHR--------------------VLPP-------QL-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~--------------------~~p~-------~~-~~~~p~~~~Li~~~L~~dP~ 350 (720)
|||++ +|............+... ..+. .. ........+|+.+||.++|.
T Consensus 192 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 271 (286)
T cd07832 192 AELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPS 271 (286)
T ss_pred HHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChh
Confidence 99999 343332221111111100 0000 00 11123445999999999999
Q ss_pred CCCChHHHHcCcccC
Q 004989 351 GRPKMGELLQSEFLN 365 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~ 365 (720)
+|||++++|+||||.
T Consensus 272 ~R~~~~~~l~h~~~~ 286 (286)
T cd07832 272 KRLSAAEALRHPYFT 286 (286)
T ss_pred hCCCHHHHhhCcCcC
Confidence 999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=264.74 Aligned_cols=209 Identities=15% Similarity=0.161 Sum_probs=155.6
Q ss_pred hhhhhhcccC-CCCCceecccceeecC-CCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~-~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..|..++..+ +||||+++++.++... .....++++||| .|++|.+++. .....+++..+..++.||+.||.|||
T Consensus 62 ~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 141 (286)
T cd06638 62 EAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH 141 (286)
T ss_pred HHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH
Confidence 3566678887 7999999999444322 233468999999 8999999874 23345899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+++|+||||||+||+++.++.++|+|||.+....... .
T Consensus 142 ~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~-------- 179 (286)
T cd06638 142 VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR----------------------------------L-------- 179 (286)
T ss_pred hCCccccCCCHHhEEECCCCCEEEccCCceeecccCC----------------------------------C--------
Confidence 9999999999999999999999999998873321000 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCcccc
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASD 293 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sD 293 (720)
......|++.|+|||++.. ..++.++|
T Consensus 180 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 211 (286)
T cd06638 180 ------------------------------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCD 211 (286)
T ss_pred ------------------------------------------------ccccccCCCcccChhhhchhhhccccccchhh
Confidence 0001357899999999853 33788999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||||||++|||++ ||......... ..+.....+.. ....++ ...+|+.+||+.+|++|||+.|+++|+||
T Consensus 212 v~slGvi~~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 212 VWSLGITAIELGDGDPPLADLHPMRAL-FKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred hhhHHHHHHHHhcCCCCCCCCchhHHH-hhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 9999999999998 55544332222 22222221111 122223 45699999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-30 Score=292.85 Aligned_cols=209 Identities=21% Similarity=0.273 Sum_probs=154.7
Q ss_pred hhhhhcccCC-CCCceecccceee-c-CCC-CCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGD-HLRNQGGLSGVCE-N-EAA-IDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~-~-~~~-~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+|+.+|+.|. |||||.|++.... . ... ...++|.||| .|+.|-++|++ -...|++.++++||+|+++||.+||.
T Consensus 83 ~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~ 162 (738)
T KOG1989|consen 83 REIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY 162 (738)
T ss_pred HHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 6777888887 9999999993332 2 223 4679999999 66899999942 23349999999999999999999999
Q ss_pred CC--ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 140 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 140 ~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.. |||||||-|||||+.+|+.||||||.++..-.... ..+++.
T Consensus 163 ~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~-----------------~~~e~~------------------ 207 (738)
T KOG1989|consen 163 LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPT-----------------SAQEVN------------------ 207 (738)
T ss_pred CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCc-----------------cHHHHH------------------
Confidence 87 99999999999999999999999998843211100 000000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc---cCCCCCccccc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l---~~~~~s~~sDI 294 (720)
. .+. .....-|+.|+|||++ .+.+.+.++||
T Consensus 208 ------------------------------------~--ve~--------eI~k~TTp~YRsPEMIDlysg~pI~eKsDI 241 (738)
T KOG1989|consen 208 ------------------------------------Y--VEE--------EIEKYTTPQYRSPEMIDLYSGLPIGEKSDI 241 (738)
T ss_pred ------------------------------------H--HHH--------HHHhhCCccccChHHHhhhcCCCCcchhHH
Confidence 0 000 0112349999999987 56679999999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|||+||-|+. ||...... .|.++.+ -|.+...+....+||..||++||.+||++-+++.
T Consensus 242 WALGclLYkLCy~t~PFe~sg~l-----aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~ 306 (738)
T KOG1989|consen 242 WALGCLLYKLCYFTTPFEESGKL-----AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLE 306 (738)
T ss_pred HHHHHHHHHHHHhCCCcCcCcce-----eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence 999999999987 88875332 1223222 2223344455569999999999999999999986
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-30 Score=264.87 Aligned_cols=208 Identities=19% Similarity=0.214 Sum_probs=162.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
..+|..++++++||||+++++ .+... ..+++++|| .+++|.+++......+++..+..++.||+.||.|||+ .|
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ 121 (265)
T cd06605 46 ILRELDILHKCNSPYIVGFYG-AFYNN---GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK 121 (265)
T ss_pred HHHHHHHHHHCCCCchhhhhe-eeecC---CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 346777889999999999999 44444 368999999 7799999996554569999999999999999999999 99
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||||+||+++.++.++|+|||.+.......
T Consensus 122 i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~---------------------------------------------- 155 (265)
T cd06605 122 IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL---------------------------------------------- 155 (265)
T ss_pred eecCCCCHHHEEECCCCCEEEeecccchhhHHHH----------------------------------------------
Confidence 9999999999999999999999998763210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ....++..|+|||.+.+..++.++|||||||++
T Consensus 156 ---------------------------------------------~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l 189 (265)
T cd06605 156 ---------------------------------------------A-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSL 189 (265)
T ss_pred ---------------------------------------------h-hcccCChhccCHHHHcCCCCCchhhHHHHHHHH
Confidence 0 003568889999999888899999999999999
Q ss_pred hhccc---cCCCCc----hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGE----EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~----~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||.... .....+..+.....+..... ..+...+||.+||..||.+|||+.+++.||||+..
T Consensus 190 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 190 IELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 99999 555431 22223333333222222222 23345699999999999999999999999999865
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=265.97 Aligned_cols=204 Identities=20% Similarity=0.243 Sum_probs=158.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIF 127 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~ 127 (720)
..+|..++.+++||||+++++ ++.... ..|++||| .+++|.+++.... ..+++.+++.++
T Consensus 55 ~~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 130 (283)
T cd05048 55 FRQEAELMSDLQHPNIVCLLG-VCTKEQ---PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIA 130 (283)
T ss_pred HHHHHHHHHhcCCcccceEEE-EEcCCC---ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHH
Confidence 346778899999999999999 554432 57999999 8999999994321 347899999999
Q ss_pred HHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccc
Q 004989 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 131 ~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~--------------------------------- 177 (283)
T cd05048 131 IQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSA--------------------------------- 177 (283)
T ss_pred HHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccc---------------------------------
Confidence 99999999999999999999999999999999999999887432110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC
Q 004989 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
+. .. ......+++.|+|||.+.+..
T Consensus 178 -~~----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~ 202 (283)
T cd05048 178 -DY----------------------------------YR--------------------VQSKSLLPVRWMPPEAILYGK 202 (283)
T ss_pred -cc----------------------------------cc--------------------ccCCCcccccccCHHHhccCc
Confidence 00 00 000135678899999998888
Q ss_pred CCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||...... ..+..+..+..++......+...+|+.+||..||.+||++.||++
T Consensus 203 ~~~~sDv~slG~il~el~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~ 278 (283)
T cd05048 203 FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-EVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHT 278 (283)
T ss_pred CchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9999999999999999997 66554433 445555555444433333345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=266.20 Aligned_cols=210 Identities=15% Similarity=0.141 Sum_probs=156.5
Q ss_pred hhhhhhcccC-CCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+|..++.++ +||||+++++.+...+. ....+|++||| .|++|.++++. ....+++..++.++.||+.||.|||
T Consensus 66 ~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 145 (291)
T cd06639 66 EAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH 145 (291)
T ss_pred HHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3566677777 89999999994443322 23468999999 89999998842 3445899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+||||||+||+++.++.++|+|||.+....... .
T Consensus 146 ~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~-------- 183 (291)
T cd06639 146 NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR----------------------------------L-------- 183 (291)
T ss_pred hCCeeccCCCHHHEEEcCCCCEEEeecccchhccccc----------------------------------c--------
Confidence 9999999999999999999999999999874321110 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-----CCcccc
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASD 293 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sD 293 (720)
......|+..|+|||.+.... ++.++|
T Consensus 184 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 215 (291)
T cd06639 184 ------------------------------------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCD 215 (291)
T ss_pred ------------------------------------------------cccCccCCccccChhhhcCCCCcccccCCccc
Confidence 000135788999999986432 688999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
||||||++|||++ ||......... ..+.....+.. ....+ +...+||.+||+++|++||++.|+++||||+
T Consensus 216 i~slGvi~~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 216 VWSLGITAIELGDGDPPLFDMHPVKTL-FKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred hHHHHHHHHHHhhCCCCCCCCcHHHHH-HHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 9999999999999 55544333222 22322222111 11122 3445999999999999999999999999984
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=267.23 Aligned_cols=205 Identities=15% Similarity=0.151 Sum_probs=162.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++..+. .+|++||| .+++|.+++... ..+++..++.++.||+.||.|||+.|
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~ 121 (290)
T cd05580 47 HVLNEKRILQSIRHPFLVNLYG-SFQDDS---NLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLD 121 (290)
T ss_pred HHHHHHHHHHhCCCCCccceee-EEEcCC---eEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447788999999999999999 444443 57999999 699999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||++......
T Consensus 122 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----------------------------------------------- 154 (290)
T cd05580 122 IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----------------------------------------------- 154 (290)
T ss_pred EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----------------------------------------------
Confidence 999999999999999999999999877322100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....|++.|+|||.+.+..++.++||||||+++
T Consensus 155 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 188 (290)
T cd05580 155 ----------------------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILI 188 (290)
T ss_pred ----------------------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHH
Confidence 0013578999999999888889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+.....+ ......+...+++.+||..||.+|+ +++|+++||||...
T Consensus 189 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 189 YEMLAGYPPFFDDNPI-QIYEKILEGKVR-FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhcCCcc-CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 99999 66554432 233333322211 1111234556999999999999999 89999999999775
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=267.39 Aligned_cols=201 Identities=18% Similarity=0.224 Sum_probs=152.7
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++...+||||+.+++ .+..+. .+++|||| .|++|.+++...+ .+++..+..++.||+.||.|||++||+|||||
T Consensus 50 ~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivH~dik 124 (279)
T cd05633 50 LVSTGDCPFIVCMTY-AFHTPD---KLCFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRFVVYRDLK 124 (279)
T ss_pred HHhhCCCCcEeEEEE-EEecCC---eEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCC
Confidence 445568999999988 554443 57999999 9999999995544 49999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccC
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.++++|||++...+...
T Consensus 125 p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------------- 151 (279)
T cd05633 125 PANILLDEHGHVRISDLGLACDFSKKK----------------------------------------------------- 151 (279)
T ss_pred HHHEEECCCCCEEEccCCcceeccccC-----------------------------------------------------
Confidence 999999999999999998873221000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchhhhccc-
Q 004989 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....||+.|+|||.+.+ ..++.++|||||||++|+|++
T Consensus 152 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 192 (279)
T cd05633 152 ---------------------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRG 192 (279)
T ss_pred ---------------------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhC
Confidence 001257899999999864 458999999999999999999
Q ss_pred --cCCCCchHH-HHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004989 307 --PFSTGEEKT-RTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 307 --pf~~~~~~~-~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
||....... ....... ...+..++... ++..+|+.+||+.||++|| ++.|+++||||+...
T Consensus 193 ~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 193 HSPFRQHKTKDKHEIDRMT-LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCCcCCCCCcCHHHHHHHh-hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 664332111 1111111 11222222233 4556999999999999999 699999999999863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=259.74 Aligned_cols=206 Identities=20% Similarity=0.270 Sum_probs=159.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+|++++||||+++++ .+..+. .++++||| .+++|.+++... ...+++..++.++.|++.+|.|||++
T Consensus 45 ~~~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 45 AAQNECQVLKLLSHPNIIEYYE-NFLEDK---ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred HHHHHHHHHhhCCCCchhheee-eEecCC---EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4447788999999999999999 443332 57999999 899999999543 44589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+|+||||+||+++.++ .++|+|||.+...+...
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-------------------------------------------- 156 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc--------------------------------------------
Confidence 999999999999998554 57998888773321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......|++.|+|||.+.+..++.++|||||||
T Consensus 157 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 189 (256)
T cd08220 157 -----------------------------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGC 189 (256)
T ss_pred -----------------------------------------------cccccccCCcccCchhccCCCCCcccchHHHHH
Confidence 000135788999999998888899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++|+|++ ||............ .....++......+...+|+.+||+++|.+|||+.|+++||||
T Consensus 190 ~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 190 VLYELASLKRAFEAANLPALVLKI-MSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHHHHhCCCCcccCchHHHHHHH-HhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9999999 66655444333332 2222222222234556699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=262.48 Aligned_cols=211 Identities=18% Similarity=0.178 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+.. ...++++||| .+++|.+++.+.. .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (265)
T cd06652 50 ALECEIQLLKNLLHERIVQYYG-CLRDPM-ERTLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSNM 126 (265)
T ss_pred HHHHHHHHHHhcCCCCeeeEEe-EeccCC-CceEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 443322 2357899999 8999999996543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+......... .-
T Consensus 127 i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~-------------------------------~~----------- 164 (265)
T cd06652 127 IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS-------------------------------GT----------- 164 (265)
T ss_pred EecCCCCHHHEEecCCCCEEECcCcccccccccccc-------------------------------cc-----------
Confidence 999999999999999999999999887432110000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||++.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 199 (265)
T cd06652 165 ---------------------------------------------GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTV 199 (265)
T ss_pred ---------------------------------------------ccccCCCCccccChhhhcCCCCCcchhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||++ ||........... +......+..+...+ ...+++.+||. +|+.||+++++++|||+.
T Consensus 200 ~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 200 VEMLTEKPPWAEFEAMAAIFK-IATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHhhCCCCCCccchHHHHHH-HhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 99999 5544433333222 222222222222333 34589999994 999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=260.11 Aligned_cols=204 Identities=15% Similarity=0.188 Sum_probs=154.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 39 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 114 (252)
T cd05084 39 KFLQEARILKQYSHPNIVRLIG-VCTQKQ---PIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH 114 (252)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEcCCC---CeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777899999999999999 554443 57999999 899999999665556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...... .+ .
T Consensus 115 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----------------------------------~~---~------- 150 (252)
T cd05084 115 CIHRDLAARNCLVTEKNVLKISDFGMSREEEDG----------------------------------VY---A------- 150 (252)
T ss_pred ccccccchheEEEcCCCcEEECccccCcccccc----------------------------------cc---c-------
Confidence 999999999999999999999999887422100 00 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........+..|+|||.+.+..++.++|||||||++
T Consensus 151 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 186 (252)
T cd05084 151 --------------------------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILL 186 (252)
T ss_pred --------------------------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHH
Confidence 000001224569999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++ ..... +...+|+.+||+++|++|||+.++++
T Consensus 187 ~e~~~~~~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 187 WEAFSLGAVPYANLSNQ-QTREAIEQGVRLP-CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHHhCCCCCccccCHH-HHHHHHHcCCCCC-CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99997 44433322 3333333332222 22333 44459999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=262.38 Aligned_cols=208 Identities=19% Similarity=0.246 Sum_probs=163.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+++.++||||+++++ .+.++ ..+|+++|| .+++|.+++... .+++..++.++.||+.||.|||++||
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i 119 (274)
T cd06609 46 IQQEIQFLSQCRSPYITKYYG-SFLKG---SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGK 119 (274)
T ss_pred HHHHHHHHHHcCCCCeeeeeE-EEEEC---CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 346777899999999999999 44444 368999999 899999999654 58999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.++|+|||.+...+....
T Consensus 120 ~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~---------------------------------------------- 153 (274)
T cd06609 120 IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS---------------------------------------------- 153 (274)
T ss_pred ccCCCCHHHEEECCCCCEEEcccccceeeccccc----------------------------------------------
Confidence 9999999999999999999999988743321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 154 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~ 189 (274)
T cd06609 154 --------------------------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAI 189 (274)
T ss_pred --------------------------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHH
Confidence 001135788999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-C-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-F-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||...... .....+.... ++.+... . +...+++.+||..+|++|||++++++||||.....
T Consensus 190 ~l~tg~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 190 ELAKGEPPLSDLHPM-RVLFLIPKNN-PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred HHHhCCCCcccCchH-HHHHHhhhcC-CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 9999 55443332 2223333332 2222222 3 45569999999999999999999999999988644
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=265.37 Aligned_cols=212 Identities=14% Similarity=0.146 Sum_probs=160.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ .+.... .+|++||| .|++|.+++... ...+++..++.++.||+.||.|||+
T Consensus 45 ~~~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 120 (286)
T cd06622 45 QIIMELDILHKAVSPYIVDFYG-AFFIEG---AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE 120 (286)
T ss_pred HHHHHHHHHHhcCCCcHHhhhh-heecCC---eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3446778899999999999999 444432 67999999 899999988553 2358999999999999999999997
Q ss_pred -CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 -QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 -~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 121 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------- 157 (286)
T cd06622 121 EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL------------------------------------------- 157 (286)
T ss_pred cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-------------------------------------------
Confidence 599999999999999999999999998873221000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC------CCccc
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCAS 292 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~s~~s 292 (720)
.....|++.|+|||.+.+.. ++.++
T Consensus 158 -------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~ 188 (286)
T cd06622 158 -------------------------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQS 188 (286)
T ss_pred -------------------------------------------------cccCCCccCccCcchhcCCCCCccCCCCccc
Confidence 00124688899999985543 58899
Q ss_pred cchhhhchhhhccc---cCCCCchH--HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 293 DIYRLGVLLFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||||++|+|++ ||...... ...+..+.....+.......+...+|+.+||+.+|.+||++.++++||||...
T Consensus 189 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 189 DVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred chHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 99999999999999 56443221 12222333333333222233445699999999999999999999999999877
Q ss_pred ccc
Q 004989 368 RDS 370 (720)
Q Consensus 368 ~~~ 370 (720)
...
T Consensus 269 ~~~ 271 (286)
T cd06622 269 KNA 271 (286)
T ss_pred cCC
Confidence 443
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=277.92 Aligned_cols=204 Identities=15% Similarity=0.179 Sum_probs=154.5
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------------------
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------------------- 115 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------------------- 115 (720)
.+|..+|..+ +|||||++++ .+.... ..+++||| .||+|.+++....
T Consensus 86 ~~Ei~il~~l~~HpnIv~l~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (375)
T cd05104 86 MSELKVLSYLGNHINIVNLLG-ACTVGG---PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMS 161 (375)
T ss_pred HHHHHHHHHhcCCcceeeeee-eeccCC---cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhccc
Confidence 3678889888 8999999999 554443 56999999 9999999994321
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 004989 116 -----------------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 116 -----------------------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
..+++..++.++.||+.||.|||++||+|||||
T Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk 241 (375)
T cd05104 162 CDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLA 241 (375)
T ss_pred chhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCc
Confidence 247888999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccC
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.++|+|||++....... .+
T Consensus 242 p~Nill~~~~~~kl~DfG~a~~~~~~~---------------------------------~~------------------ 270 (375)
T cd05104 242 ARNILLTHGRITKICDFGLARDIRNDS---------------------------------NY------------------ 270 (375)
T ss_pred hhhEEEECCCcEEEecCccceeccCcc---------------------------------cc------------------
Confidence 999999999999999999874321110 00
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc--
Q 004989 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
. ......++..|+|||++.+..++.++|||||||++|||++
T Consensus 271 -------------------~------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g 313 (375)
T cd05104 271 -------------------V------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG 313 (375)
T ss_pred -------------------c------------------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 0 0000234677999999998889999999999999999997
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||............+.....+.......++..+|+.+||+.||++||++.||++
T Consensus 314 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 314 SSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred CCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 565543333344444433222221122234569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=266.01 Aligned_cols=211 Identities=16% Similarity=0.193 Sum_probs=157.2
Q ss_pred hchhhhhhcccC-CCCCceecccceeecC--CCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENE--AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~--~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+.+.|..++.++ +||||+++++.++... .....+|++||| .+++|.+++.. ....+++..++.++.||+.||.||
T Consensus 58 ~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L 137 (282)
T cd06636 58 EIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL 137 (282)
T ss_pred HHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 344666777777 7999999999444322 223468999999 78899999843 334588999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+|+||||+||+++.++.++|+|||.+........
T Consensus 138 H~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------- 176 (282)
T cd06636 138 HAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG----------------------------------------- 176 (282)
T ss_pred HHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc-----------------------------------------
Confidence 999999999999999999999999999988732210000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCAS 292 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~s 292 (720)
......|++.|+|||.+. +..++.++
T Consensus 177 -------------------------------------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~ 207 (282)
T cd06636 177 -------------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRS 207 (282)
T ss_pred -------------------------------------------------CCCcccccccccCHhhcCcccCcCcCCCccc
Confidence 000136789999999986 33488899
Q ss_pred cchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 293 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||||++|||++ ||.......... .+.....+......++ ...+||.+||+.||.+||++.|||+||||
T Consensus 208 DvwslG~~l~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 208 DIWSLGITAIEMAEGAPPLCDMHPMRALF-LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred chhHHHHHHHHHHhCCCCccccCHHhhhh-hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 99999999999999 554433322222 2222222222222333 45699999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-30 Score=238.71 Aligned_cols=238 Identities=17% Similarity=0.220 Sum_probs=177.0
Q ss_pred ccccCCCCCC---cccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH
Q 004989 35 SGVSDRNPRL---LRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL 111 (720)
Q Consensus 35 ~~~~~~~~~~---~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L 111 (720)
.+++.+|... ++-+|+.+..+... .--..-||+.+|..++|.|||+++++ ...+. .+.+|+||+..+|..+.
T Consensus 17 tvfkarn~~t~eivalkrvrlddddeg-vpssalreicllkelkhknivrl~dv-lhsdk---kltlvfe~cdqdlkkyf 91 (292)
T KOG0662|consen 17 TVFKARNRETHEIVALKRVRLDDDDEG-VPSSALREICLLKELKHKNIVRLHDV-LHSDK---KLTLVFEFCDQDLKKYF 91 (292)
T ss_pred eeEecccCCccceEEEEEEeccCCCCC-CcHHHHHHHHHHHHhhhcceeehhhh-hccCc---eeEEeHHHhhHHHHHHH
Confidence 3455555443 34444444333211 11133377889999999999999994 44443 46899999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCC
Q 004989 112 DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLS 191 (720)
Q Consensus 112 ~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~ 191 (720)
..-++.++.+.++.++.|++.||.|+|++++.||||||.|+||+.+|.+|++|||+++.+|.+..+.
T Consensus 92 dslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcy------------- 158 (292)
T KOG0662|consen 92 DSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY------------- 158 (292)
T ss_pred HhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEee-------------
Confidence 7777779999999999999999999999999999999999999999999999999997777662210
Q ss_pred CCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccc
Q 004989 192 SPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILL 271 (720)
Q Consensus 192 ~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 271 (720)
...
T Consensus 159 -----------------------------------------------------------------------------sae 161 (292)
T KOG0662|consen 159 -----------------------------------------------------------------------------SAE 161 (292)
T ss_pred -----------------------------------------------------------------------------ece
Confidence 003
Q ss_pred ccCCcccCcccccCCC-CCccccchhhhchhhhccc---cCCCC-chHHHHHHHhhcC------CCC-----------cc
Q 004989 272 METNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTG-EEKTRTMSSLRHR------VLP-----------PQ 329 (720)
Q Consensus 272 ~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt---pf~~~-~~~~~~~~~l~~~------~~p-----------~~ 329 (720)
+-|.||++|.++.|.. |+++.|+||.|||+.||.. |..+. +...+.+...+.- ..| |.
T Consensus 162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ 241 (292)
T KOG0662|consen 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPI 241 (292)
T ss_pred eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCC
Confidence 5699999999999988 9999999999999999998 54444 3333333332210 000 00
Q ss_pred cc------ccCc----hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 330 LL------LKFP----KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 330 ~~------~~~p----~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++ ...| ...+|+.++|.-+|..|.+++++|+||||...
T Consensus 242 ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 242 YPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred ccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 00 0111 22489999999999999999999999999865
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=266.79 Aligned_cols=207 Identities=15% Similarity=0.268 Sum_probs=155.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++++++||||+++++ ++.+.. ..|+||||.+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 50 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~ 125 (291)
T cd07844 50 AIREASLLKDLKHANIVTLHD-IIHTKK---TLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVL 125 (291)
T ss_pred HHHHHHHHhhCCCcceeeEEE-EEecCC---eEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346888999999999999999 554443 6799999966799999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.....+..
T Consensus 126 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 158 (291)
T cd07844 126 HRDLKPQNLLISERGELKLADFGLARAKSVPSK----------------------------------------------- 158 (291)
T ss_pred cccCCHHHEEEcCCCCEEECccccccccCCCCc-----------------------------------------------
Confidence 999999999999999999999988732211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~ 195 (291)
T cd07844 159 -------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFY 195 (291)
T ss_pred -------------------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHH
Confidence 00002457889999998764 4889999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc---CC---------------------C-Cccc----ccc--CchHHHHHHHcCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH---RV---------------------L-PPQL----LLK--FPKEASFCLWLLHPE 348 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~---~~---------------------~-p~~~----~~~--~p~~~~Li~~~L~~d 348 (720)
+|++ ||............+.. .. . +..+ ... .+...+|+.+||+++
T Consensus 196 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~ 275 (291)
T cd07844 196 EMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYE 275 (291)
T ss_pred HHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccC
Confidence 9998 55443322111111100 00 0 0000 011 144559999999999
Q ss_pred CCCCCChHHHHcCccc
Q 004989 349 PSGRPKMGELLQSEFL 364 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~ 364 (720)
|.+|||+.++|+||||
T Consensus 276 p~~Rps~~e~l~~~~f 291 (291)
T cd07844 276 PKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccCHHHHhcCCCC
Confidence 9999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-30 Score=280.30 Aligned_cols=193 Identities=22% Similarity=0.247 Sum_probs=151.9
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
..+..-+||||+++.+ ++.++. ++|+|||+ .|+-|.+.+.... ....++..|++||+.||.|||++|||||||
T Consensus 368 ~~~~~~~h~niv~~~~-v~~~~~---~~~~v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~gvvhRDL 441 (612)
T KOG0603|consen 368 ISLLVRDHPNIVKSHD-VYEDGK---EIYLVMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQGVVHRDL 441 (612)
T ss_pred hhhhhcCCCcceeecc-eecCCc---eeeeeehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcCeeecCC
Confidence 3455578999999999 776665 57999999 7776766664433 223788899999999999999999999999
Q ss_pred CCCcEEE-ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccc
Q 004989 148 RPSCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 148 KP~NILl-~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
||+|||+ ...++++|+|||.++..... +
T Consensus 442 kp~NIL~~~~~g~lrltyFG~a~~~~~~--------------------------------------------------~- 470 (612)
T KOG0603|consen 442 KPGNILLDGSAGHLRLTYFGFWSELERS--------------------------------------------------C- 470 (612)
T ss_pred ChhheeecCCCCcEEEEEechhhhCchh--------------------------------------------------h-
Confidence 9999999 58999999999988432111 0
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc
Q 004989 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt 306 (720)
...+=|..|.|||++....|+.++||||||++||+||+
T Consensus 471 ------------------------------------------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~ 508 (612)
T KOG0603|consen 471 ------------------------------------------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT 508 (612)
T ss_pred ------------------------------------------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHh
Confidence 00133788999999998889999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||........++..+ .++.+....+..+ +|+.+||++||.+||++.+++.||||
T Consensus 509 G~tp~~~~P~~~ei~~~i----~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 509 GRTLFAAHPAGIEIHTRI----QMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CCCccccCCchHHHHHhh----cCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 555444433444444 4444444445544 99999999999999999999999999
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=263.62 Aligned_cols=213 Identities=18% Similarity=0.236 Sum_probs=160.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++++++||||+++++ ++.... ...+|++||| .|++|.+++. .....+++..+..++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH 122 (287)
T cd06621 45 QILRELEINKSCKSPYIVKYYG-AFLDES-SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH 122 (287)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-EEEccC-CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3446778999999999999999 443332 2357999999 8999998873 23455899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 123 ~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------- 159 (287)
T cd06621 123 SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL------------------------------------------- 159 (287)
T ss_pred HCCcccCCCCHHHEEEecCCeEEEeeccccccccccc-------------------------------------------
Confidence 9999999999999999999999999998873211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....++..|+|||.+.+..++.++||||||
T Consensus 160 -------------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG 190 (287)
T cd06621 160 -------------------------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLG 190 (287)
T ss_pred -------------------------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHH
Confidence 0012457889999999888899999999999
Q ss_pred chhhhccc---cCCCCc----hHHHHHHHhhcCCCCcccc------ccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 299 VLLFELFC---PFSTGE----EKTRTMSSLRHRVLPPQLL------LKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~----~~~~~~~~l~~~~~p~~~~------~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++|+|++ ||.... ........+... .++.+. ..++ ...+|+.+||.++|++|||+.|++.||||
T Consensus 191 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 191 LTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred HHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-CchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 99999999 554431 112222222221 111111 1222 34599999999999999999999999999
Q ss_pred CCCccc
Q 004989 365 NEPRDS 370 (720)
Q Consensus 365 ~~~~~~ 370 (720)
......
T Consensus 270 ~~~~~~ 275 (287)
T cd06621 270 KAQMKK 275 (287)
T ss_pred cccccc
Confidence 776443
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=268.06 Aligned_cols=215 Identities=18% Similarity=0.208 Sum_probs=160.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++.... ...+++||||.+++|.+++......+++.+++.++.||+.||.|||+.|++
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 130 (309)
T cd07845 53 SLREITLLLNLRHPNIVELKE-VVVGKH-LDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFII 130 (309)
T ss_pred hhHHHHHHHhCCCCCCcceEE-EEecCC-CCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346788999999999999999 443322 235799999977799999965556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+...+....
T Consensus 131 H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------- 163 (309)
T cd07845 131 HRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK----------------------------------------------- 163 (309)
T ss_pred cCCCCHHHEEECCCCCEEECccceeeecCCccC-----------------------------------------------
Confidence 999999999999999999999988743321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+. .++.++|||||||++|
T Consensus 164 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~ 200 (309)
T cd07845 164 -------------------------------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILA 200 (309)
T ss_pred -------------------------------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHH
Confidence 00012457889999998764 4899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--------------------CCCcc--------ccccCchHHHHHHHcCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR--------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--------------------~~p~~--------~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
||++ ||................ ..+.. +....+...+||.+||++||++
T Consensus 201 el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~ 280 (309)
T cd07845 201 ELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKK 280 (309)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhh
Confidence 9999 555443332221111100 00000 0112344569999999999999
Q ss_pred CCChHHHHcCcccCCCccc
Q 004989 352 RPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~~~ 370 (720)
|||+.++++||||.....+
T Consensus 281 R~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 281 RATAEEALESSYFKEKPLP 299 (309)
T ss_pred CcCHHHHhcChhhccCCCC
Confidence 9999999999999876443
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=265.80 Aligned_cols=206 Identities=17% Similarity=0.160 Sum_probs=159.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..++||||+++++ ++.+.. ..|+||||..++|.+++......+++..+..++.||+.||.|||+.||+
T Consensus 62 ~~~Ei~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~ 137 (307)
T cd06607 62 IIKEVRFLQQLRHPNTIEYKG-CYLREH---TAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERI 137 (307)
T ss_pred HHHHHHHHHhCCCCCEEEEEE-EEEeCC---eEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 346777999999999999999 554443 5799999966788888855455699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+......
T Consensus 138 H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~------------------------------------------------- 168 (307)
T cd06607 138 HRDIKAGNILLTEPGTVKLADFGSASLVSPA------------------------------------------------- 168 (307)
T ss_pred ecCCCcccEEECCCCCEEEeecCcceecCCC-------------------------------------------------
Confidence 9999999999999999999998876221000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhhch
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
....|++.|+|||++. ...++.++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~i 203 (307)
T cd06607 169 ---------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203 (307)
T ss_pred ---------------------------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHH
Confidence 0035678899999984 3448899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|||++ ||........ ...+.....+......++. ..+|+.+||..+|.+||++.+++.||||....
T Consensus 204 l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 204 CIELAERKPPLFNMNAMSA-LYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred HHHHHcCCCCCCCccHHHH-HHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 999999 4544333322 2223333223222233443 45999999999999999999999999998764
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=267.56 Aligned_cols=209 Identities=15% Similarity=0.183 Sum_probs=162.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+++.++||||+++++ ++.... .+|+++|| .+++|.+++... .+++.++..++.||+.||.|||++|+
T Consensus 63 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i 136 (296)
T cd06655 63 IINEILVMKELKNPNIVNFLD-SFLVGD---ELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQV 136 (296)
T ss_pred HHHHHHHHHhcCCCceeeeee-eEecCc---eEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777899999999999999 454433 57999999 899999988543 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... .
T Consensus 137 ~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~------------ 170 (296)
T cd06655 137 IHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ----------------------------------S------------ 170 (296)
T ss_pred ccCCCCHHHEEECCCCCEEEccCccchhccccc----------------------------------c------------
Confidence 999999999999999999999998874321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 171 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~ 206 (296)
T cd06655 171 --------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 206 (296)
T ss_pred --------------------------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHH
Confidence 000135788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|++ ||..................+....... +...+|+.+||..||.+||++.++++||||....
T Consensus 207 ~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 207 EMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 9999 6665544333222222221111122223 4455999999999999999999999999998753
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=268.23 Aligned_cols=222 Identities=16% Similarity=0.147 Sum_probs=161.4
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
..-+...|..+++.++||||+++++ ++.... .+|++||| .+++|.+++.. ....+++..+..+++||+.||.||
T Consensus 42 ~~~~~~~Ei~~l~~l~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~L 117 (314)
T cd08216 42 DLKLLQQEIITSRQLQHPNILPYVT-SFIVDS---ELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYI 117 (314)
T ss_pred HHHHHHHHHHHHHhcCCcchhhhhh-eeecCC---eEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 3345567888999999999999999 444433 57999999 88999999954 334589999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+||+++.++.++++||+.+......... .....++
T Consensus 118 H~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~--------------------------~~~~~~~------- 164 (314)
T cd08216 118 HSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR--------------------------QRVVHDF------- 164 (314)
T ss_pred HHCCeecCCCCcceEEEecCCceEEecCccceeecccccc--------------------------ccccccc-------
Confidence 9999999999999999999999999999877432110000 0000000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCccccch
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIY 295 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIw 295 (720)
.....++..|+|||++.+. .++.++|||
T Consensus 165 --------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Diw 194 (314)
T cd08216 165 --------------------------------------------------PKSSVKNLPWLSPEVLQQNLQGYNEKSDIY 194 (314)
T ss_pred --------------------------------------------------cccccccccccCHHHhcCCCCCCCcchhHH
Confidence 0113568889999999764 488999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCC--------CCcc-----------------------cc-ccCchHHHH
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--------LPPQ-----------------------LL-LKFPKEASF 340 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--------~p~~-----------------------~~-~~~p~~~~L 340 (720)
||||++|||++ ||............+.... .+.. .. ...+...+|
T Consensus 195 s~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 274 (314)
T cd08216 195 SVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQF 274 (314)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHH
Confidence 99999999998 6655443333222222110 0000 00 001234589
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 341 CLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+.+||.+||++|||+.++|+||||+...
T Consensus 275 i~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 275 VELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred HHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 9999999999999999999999998764
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-29 Score=261.79 Aligned_cols=212 Identities=16% Similarity=0.235 Sum_probs=160.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++ ++.+.. .++++||| .|++|.+++.+. .++++..++.++.||+.||.|||++|
T Consensus 49 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~ 123 (268)
T cd06630 49 ALRKEIRLMARLNHPHIIRMLG-ATCEDS---HFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQ 123 (268)
T ss_pred HHHHHHHHHHHcCCCceehhhc-eeccCC---eEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 444443 57999999 999999999554 35899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 142 IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
++|+||||+||+++.++ .++|+|||.+.......... .+
T Consensus 124 i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------------------------~~----------- 163 (268)
T cd06630 124 IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------------------------GE----------- 163 (268)
T ss_pred eecCCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------------------------Cc-----------
Confidence 99999999999998776 58999998874332110000 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|+..|+|||.+.+..++.++|||||||+
T Consensus 164 ----------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~ 197 (268)
T cd06630 164 ----------------------------------------------FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCV 197 (268)
T ss_pred ----------------------------------------------cccccccccceeCHhHhccCCCCcccchHHHHHH
Confidence 0011357889999999988889999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 301 LFELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
+|+|++ ||..... .......+.....++.+... .+...+|+.+||..+|.+||++.++++||||.
T Consensus 198 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 198 IIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 999999 5543221 12222222222223333333 34556999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=262.28 Aligned_cols=208 Identities=19% Similarity=0.216 Sum_probs=155.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l--~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++.+++||||+++++ ++..+ ..+++++|| .+++|.+++......+ ++..+..++.||+.||.|||+
T Consensus 51 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 126 (268)
T cd06624 51 PLHEEIALHSYLKHRNIVQYLG-SDSEN---GFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126 (268)
T ss_pred HHHHHHHHHHhcCCCCeeeeee-eeccC---CEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3447778999999999999999 44443 368999999 8999999996544445 889999999999999999999
Q ss_pred CCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+||+++. .+.++|+|||.+........
T Consensus 127 ~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------ 164 (268)
T cd06624 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP------------------------------------------ 164 (268)
T ss_pred CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC------------------------------------------
Confidence 99999999999999975 67899999887733211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYR 296 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwS 296 (720)
......|++.|+|||.+.+.. ++.++||||
T Consensus 165 ------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~s 196 (268)
T cd06624 165 ------------------------------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWS 196 (268)
T ss_pred ------------------------------------------------ccccCCCCccccChhhhccccccCCchhhhHH
Confidence 000124688999999986654 789999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||++|+|++ ||.........+.........+.++... +...+|+.+||+++|.+|||+.|++.||||
T Consensus 197 lGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 197 LGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 9999999999 5543322212221111111122222223 345699999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=276.36 Aligned_cols=208 Identities=22% Similarity=0.224 Sum_probs=166.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++|||||++|. +.+... .+|+|||| .+|.|+++|.+.++ +.+.+++.+|.|++.||+|||+++||
T Consensus 103 ~rev~imk~l~HPnIvkl~~-v~~t~~---~lylV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~iv 177 (596)
T KOG0586|consen 103 GREVDIMKSLNHPNIVKLFS-VIETEA---TLYLVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKNIV 177 (596)
T ss_pred HHHHHHHHhcCCcceeeeee-eeeecc---eeEEEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhccee
Confidence 38999999999999999999 666554 57999999 99999999977776 77799999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|||||.+||||+.+.++||+|||++..+.....
T Consensus 178 HrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~----------------------------------------------- 210 (596)
T KOG0586|consen 178 HRDLKAENILLDENMNIKIADFGFSTFFDYGLM----------------------------------------------- 210 (596)
T ss_pred ccccchhhcccccccceeeeccccceeeccccc-----------------------------------------------
Confidence 999999999999999999999988743311100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll~ 302 (720)
....+|++.|.|||++.+..| ++.+|+||||++||
T Consensus 211 --------------------------------------------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly 246 (596)
T KOG0586|consen 211 --------------------------------------------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLY 246 (596)
T ss_pred --------------------------------------------ccccCCCCCccChHhhcCcccCCcceehhhhhhhhe
Confidence 011589999999999999985 78999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
-|++ ||++..-..---..++....-|.+ ...+..++|.++|.++|.+|+++++++.|.|+......
T Consensus 247 ~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 247 ALVEGSLPFDGQNLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred eeeecccccCCcccccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 9999 888754332111222221111211 12334589999999999999999999999999877443
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=258.67 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=164.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|++++||||+++++ ++.... ..+++||| .+++|.+++.+. ...+++..+..++.|++.||.|||+.
T Consensus 45 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08221 45 DALNEIVILSLLQHPNIIAYYN-HFMDDN---TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120 (256)
T ss_pred HHHHHHHHHHhCCCCCeeEEEe-EEecCC---eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4457788999999999999999 444432 57999999 899999999543 45589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||+|+||+++.++.+|++|||.+........
T Consensus 121 ~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08221 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-------------------------------------------- 156 (256)
T ss_pred CccccCCChHhEEEeCCCCEEECcCcceEEcccccc--------------------------------------------
Confidence 999999999999999999999999887733211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.+..++.++|||||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i 190 (256)
T cd08221 157 ----------------------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCV 190 (256)
T ss_pred ----------------------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHH
Confidence 0001357899999999988888999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|||++ ||...... .....+..+.+++.......+..+|+.+||.++|.+||++.++|+|||+
T Consensus 191 ~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 191 LYELLTLKRTFDATNPL-NLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 999999 55544333 3444444444444433334455699999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-29 Score=264.69 Aligned_cols=209 Identities=16% Similarity=0.150 Sum_probs=161.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+...|..+++.++||||+++++ ++.... ..++||||..++|.+++......+++..+..++.||+.||.|||+.|+
T Consensus 61 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i 136 (308)
T cd06634 61 DIIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136 (308)
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEEcCC---eeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3446788999999999999999 444432 579999996678988885555568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++++|||.+......
T Consensus 137 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 168 (308)
T cd06634 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------------------------------------------------ 168 (308)
T ss_pred ccCCCCHHhEEECCCCcEEECCcccceeecCc------------------------------------------------
Confidence 99999999999999999999888876221000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccccchhhhc
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGv 299 (720)
....|++.|+|||.+.+ ..++.++|||||||
T Consensus 169 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~ 202 (308)
T cd06634 169 ----------------------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 202 (308)
T ss_pred ----------------------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHH
Confidence 01356889999999853 44788999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
++|+|++ ||....... ....+.....+......++ ...+||.+||.++|.+||++.+++.|||+.....+
T Consensus 203 il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~ 276 (308)
T cd06634 203 TCIELAERKPPLFNMNAMS-ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 276 (308)
T ss_pred HHHHHHcCCCCCccccHHH-HHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCCh
Confidence 9999998 554443332 2223333333333233344 34599999999999999999999999999986443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=268.87 Aligned_cols=210 Identities=14% Similarity=0.179 Sum_probs=161.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+++.++||||+++++ .+..+. .+|+|||| .+++|.+++.+. .+++..+..++.|++.||.|||+.||
T Consensus 63 ~~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i 136 (297)
T cd06656 63 IINEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQV 136 (297)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---EEEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777899999999999999 444433 57999999 899999998543 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+........
T Consensus 137 ~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~---------------------------------------------- 170 (297)
T cd06656 137 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---------------------------------------------- 170 (297)
T ss_pred ccCCCCHHHEEECCCCCEEECcCccceEccCCcc----------------------------------------------
Confidence 9999999999999999999999987732211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 171 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~ 206 (297)
T cd06656 171 --------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 206 (297)
T ss_pred --------------------------------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHH
Confidence 000135788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||..................+.......+ ...+|+.+||..+|.+||++.++++||||.....
T Consensus 207 ~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 207 EMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred HHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 9999 56544332222222211211212222333 3459999999999999999999999999987643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=276.34 Aligned_cols=204 Identities=18% Similarity=0.198 Sum_probs=153.4
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------------
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------------------------- 114 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------------------------- 114 (720)
..+|..+|+.+ +|||||++++ .+.... .+|++||| .+++|.+++...
T Consensus 88 ~~~E~~il~~l~~h~nIv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (374)
T cd05106 88 LMSELKILSHLGQHKNIVNLLG-ACTHGG---PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLE 163 (374)
T ss_pred HHHHHHHHHhhccCCceeeEee-EecCCC---CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchh
Confidence 33677889888 8999999999 444433 57999999 999999998432
Q ss_pred ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 004989 115 ------------------------------------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152 (720)
Q Consensus 115 ------------------------------------------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI 152 (720)
..++++.+++.|+.||+.||.|||++||+||||||+||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Ni 243 (374)
T cd05106 164 KKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNV 243 (374)
T ss_pred cccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheE
Confidence 12478889999999999999999999999999999999
Q ss_pred EEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcc
Q 004989 153 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 232 (720)
Q Consensus 153 Ll~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~ 232 (720)
|++.++.++|+|||++....... .+
T Consensus 244 l~~~~~~~kL~DfGla~~~~~~~---------------------------------~~---------------------- 268 (374)
T cd05106 244 LLTDGRVAKICDFGLARDIMNDS---------------------------------NY---------------------- 268 (374)
T ss_pred EEeCCCeEEEeeceeeeeccCCc---------------------------------ce----------------------
Confidence 99999999999999874321110 00
Q ss_pred ccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cC
Q 004989 233 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PF 308 (720)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf 308 (720)
. ......+++.|+|||++.+..++.++|||||||++|||++ ||
T Consensus 269 --------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf 315 (374)
T cd05106 269 --------------------------------V-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPY 315 (374)
T ss_pred --------------------------------e-eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 0 0000234677999999988889999999999999999986 66
Q ss_pred CCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 309 STGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
............+.... .+..+. ..+...+++.+||+.||.+|||+.++++
T Consensus 316 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 316 PGILVNSKFYKMVKRGY-QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ccccccHHHHHHHHccc-CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 55433323333333222 222222 2355569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=263.38 Aligned_cols=207 Identities=16% Similarity=0.171 Sum_probs=160.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+...|..+++.++||||+++++ ++..+. ..|++|||..++|.+++......+++..+..++.||+.||.|||++||
T Consensus 71 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i 146 (317)
T cd06635 71 DIIKEVKFLQRIKHPNSIEYKG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM 146 (317)
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEeeCC---eEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3446788999999999999999 554443 579999996678988885555669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||+|+||+++.++.++|+|||.+......
T Consensus 147 ~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 178 (317)
T cd06635 147 IHRDIKAGNILLTEPGQVKLADFGSASIASPA------------------------------------------------ 178 (317)
T ss_pred ccCCCCcccEEECCCCCEEEecCCCccccCCc------------------------------------------------
Confidence 99999999999999999999998876221000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhhc
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGv 299 (720)
....|++.|+|||.+. ...++.++|||||||
T Consensus 179 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGv 212 (317)
T cd06635 179 ----------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 212 (317)
T ss_pred ----------------------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHH
Confidence 0135688999999984 345899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||++ ||........ ...+.....++.....++ ...+|+.+||+.+|.+||++.++++|+|+....
T Consensus 213 il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 213 TCIELAERKPPLFNMNAMSA-LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred HHHHHHhCCCCCCCccHHHH-HHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 9999999 5544433322 223333323332233333 445999999999999999999999999987653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=265.11 Aligned_cols=222 Identities=15% Similarity=0.158 Sum_probs=158.9
Q ss_pred chhhhhhcccCCCCCceecccceeecCC----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++..++||||+++++.++.... ....++++|||.+.+|..++......+++..++.++.||+.||.|||+
T Consensus 54 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~ 133 (311)
T cd07866 54 ALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE 133 (311)
T ss_pred HHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3467778999999999999995544332 133579999997778998886655569999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+|+||||+||+++.++.++|+|||++.......... ..+
T Consensus 134 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------~~~-------- 175 (311)
T cd07866 134 NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNP------------------------------KGG-------- 175 (311)
T ss_pred CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCccc------------------------------ccC--------
Confidence 999999999999999999999999999885432210000 000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLG 298 (720)
........+...|++.|+|||.+.+. .++.++||||||
T Consensus 176 -----------------------------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 214 (311)
T cd07866 176 -----------------------------------------GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIG 214 (311)
T ss_pred -----------------------------------------CcccccccccceeccCcCChHHhhCCCccCchhHhHHHH
Confidence 00000011224679999999998765 489999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhh--cCC----------------------CCcc----ccccCchHHHHHHHcCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLR--HRV----------------------LPPQ----LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~--~~~----------------------~p~~----~~~~~p~~~~Li~~~L~~ 347 (720)
|++|||++ ||.............. ... .++. +....+...+|+.+||..
T Consensus 215 ~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 294 (311)
T cd07866 215 CVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSL 294 (311)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHccc
Confidence 99999999 4443332211111110 000 0111 111224456999999999
Q ss_pred CCCCCCChHHHHcCccc
Q 004989 348 EPSGRPKMGELLQSEFL 364 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~ 364 (720)
||.+|||+.|++.||||
T Consensus 295 ~p~~R~t~~ell~~~~f 311 (311)
T cd07866 295 DPYKRLTASDALEHPYF 311 (311)
T ss_pred CcccCcCHHHHhcCCCC
Confidence 99999999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=259.30 Aligned_cols=204 Identities=18% Similarity=0.231 Sum_probs=157.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++++++||||+++++ .+.... .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 48 ~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~ 123 (262)
T cd06613 48 QQEISMLKECRHPNIVAYFG-SYLRRD---KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKI 123 (262)
T ss_pred HHHHHHHHhCCCCChhceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 36777999999999999999 444433 58999999 88999999966545699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 124 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------- 156 (262)
T cd06613 124 HRDIKGANILLTEDGDVKLADFGVSAQLTATIA----------------------------------------------- 156 (262)
T ss_pred ecCCChhhEEECCCCCEEECccccchhhhhhhh-----------------------------------------------
Confidence 999999999999999999999887732210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC---CCCccccchhhhch
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvl 300 (720)
......++..|+|||.+.+. .++.++|||||||+
T Consensus 157 -------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~ 193 (262)
T cd06613 157 -------------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGIT 193 (262)
T ss_pred -------------------------------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHH
Confidence 00013578899999999776 78999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc-cc--cccC-chHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP-QL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~--~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+|||++ ||......... ..+....+++ .+ ...+ +...+|+.+||..+|..|||+.+++.|+|
T Consensus 194 l~~~~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 194 AIELAELQPPMFDLHPMRAL-FLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHhCCCCCCCCCHHHHH-HHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 999999 55544333222 2222222222 11 1122 33459999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=263.09 Aligned_cols=208 Identities=18% Similarity=0.251 Sum_probs=155.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|..++||||+++++ ++..+. ..|++|||.+++|.+++......+++..++.++.||+.||.|||+.||
T Consensus 49 ~~~~e~~~l~~l~h~ni~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 124 (291)
T cd07870 49 TAIREASLLKGLKHANIVLLHD-IIHTKE---TLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHI 124 (291)
T ss_pred HHHHHHHHHHhcCCCCEeEEEE-EEecCC---eEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3346778899999999999999 454443 579999996688988885544558899999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+........
T Consensus 125 ~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---------------------------------------------- 158 (291)
T cd07870 125 LHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ---------------------------------------------- 158 (291)
T ss_pred ccCCCChHHEEEcCCCcEEEeccccccccCCCCC----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......+++.|+|||.+.+. .++.++|||||||++
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l 194 (291)
T cd07870 159 --------------------------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIF 194 (291)
T ss_pred --------------------------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHH
Confidence 00012468899999998764 378899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--C-----------------------CCCccc------cccCchHHHHHHHcCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--R-----------------------VLPPQL------LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~-----------------------~~p~~~------~~~~p~~~~Li~~~L~~ 347 (720)
|||++ ||............+.. + ..+..+ ....+...+|+.+||..
T Consensus 195 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~ 274 (291)
T cd07870 195 IEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMM 274 (291)
T ss_pred HHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCc
Confidence 99999 56543332222211110 0 000000 01123445999999999
Q ss_pred CCCCCCChHHHHcCccc
Q 004989 348 EPSGRPKMGELLQSEFL 364 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~ 364 (720)
||.+|||+.|++.||||
T Consensus 275 dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 275 FPKDRISAQDALLHPYF 291 (291)
T ss_pred CcccCcCHHHHhcCCCC
Confidence 99999999999999997
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=258.35 Aligned_cols=206 Identities=21% Similarity=0.195 Sum_probs=160.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+++.++||||+++++ ++..+. .+|++||| .+++|.+++.+.. .+++..++.++.||+.||.|||+.|
T Consensus 48 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (258)
T cd06632 48 QLEQEIALLSKLQHPNIVQYLG-TEREED---NLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRN 122 (258)
T ss_pred HHHHHHHHHHhcCCCCchheee-eEecCC---eEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 444443 57999999 8899999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.+||+|||.+.......
T Consensus 123 i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---------------------------------------------- 156 (258)
T cd06632 123 TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---------------------------------------------- 156 (258)
T ss_pred cccCCCCHHHEEECCCCCEEEccCccceeccccc----------------------------------------------
Confidence 9999999999999999999999988763221100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.... ++.++|+|||||+
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~ 191 (258)
T cd06632 157 ---------------------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCT 191 (258)
T ss_pred ---------------------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHH
Confidence 000135788999999997776 8999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||..................+.......+...+|+.+||+.+|.+||++.+++.|||+
T Consensus 192 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 192 VLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999 6655443322222222122222222233455699999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=266.70 Aligned_cols=209 Identities=18% Similarity=0.285 Sum_probs=161.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++..+. ..|++||| .+++|.+++.. ..+++..++.++.||+.||.|||++||
T Consensus 65 ~~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~i 138 (297)
T cd06659 65 LFNEVVIMRDYQHQNVVEMYK-SYLVGE---ELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGV 138 (297)
T ss_pred HHHHHHHHHhCCCCchhhhhh-heeeCC---eEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346778899999999999999 444443 57999999 88999998744 248999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+........
T Consensus 139 vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~---------------------------------------------- 172 (297)
T cd06659 139 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP---------------------------------------------- 172 (297)
T ss_pred ecCCCCHHHeEEccCCcEEEeechhHhhcccccc----------------------------------------------
Confidence 9999999999999999999999988732211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|+..|+|||++.+..++.++|||||||++|
T Consensus 173 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 208 (297)
T cd06659 173 --------------------------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVI 208 (297)
T ss_pred --------------------------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 000135789999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCc-ccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPP-QLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++ ||...... ..+..+.....+. ... ...+...+|+.+||+.+|.+||++.++++||||.+...
T Consensus 209 el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 209 EMVDGEPPYFSDSPV-QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 9999 55544332 2333333222111 111 22334569999999999999999999999999987743
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=246.29 Aligned_cols=225 Identities=15% Similarity=0.202 Sum_probs=167.6
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCC----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
...-..+|..+|..+.|+|++.+++++-.... ....+|+||.++..+|.-+|......++..++..++.+++.||.
T Consensus 59 fpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~ 138 (376)
T KOG0669|consen 59 FPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLY 138 (376)
T ss_pred CcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHH
Confidence 33345588889999999999999983332111 22248999999999999999666566999999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|+|...|+|||+||+|+||+.+|.+||+|||+++.+....-.
T Consensus 139 ~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~-------------------------------------- 180 (376)
T KOG0669|consen 139 YIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNV-------------------------------------- 180 (376)
T ss_pred HHHHhhHHhhcccHhhEEEcCCceEEeeccccccceeccccc--------------------------------------
Confidence 999999999999999999999999999888887543211000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDI 294 (720)
.+.+-+..+-|.||++||.+.|.. |+++.||
T Consensus 181 ------------------------------------------------~kprytnrvvTLwYrppEllLG~r~yg~~iDi 212 (376)
T KOG0669|consen 181 ------------------------------------------------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDI 212 (376)
T ss_pred ------------------------------------------------CCCCcccceeeeecCCHHHhhcccccCCcchh
Confidence 000112246799999999999877 9999999
Q ss_pred hhhhchhhhccc--cCCCCchHHHHH---HHhhcCCCCcccc-------------------------------ccCchHH
Q 004989 295 YRLGVLLFELFC--PFSTGEEKTRTM---SSLRHRVLPPQLL-------------------------------LKFPKEA 338 (720)
Q Consensus 295 wSLGvll~eLlt--pf~~~~~~~~~~---~~l~~~~~p~~~~-------------------------------~~~p~~~ 338 (720)
|+.|||+.||++ |....+.....+ ..+...+-+..++ ...+..+
T Consensus 213 WgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~ 292 (376)
T KOG0669|consen 213 WGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEAL 292 (376)
T ss_pred HhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHH
Confidence 999999999999 544333322222 2222221111110 0112446
Q ss_pred HHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 339 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 339 ~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+|+..||..||.+|+.+.++|+|.||....-+
T Consensus 293 dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 293 DLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred HHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 99999999999999999999999999886444
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=267.71 Aligned_cols=211 Identities=19% Similarity=0.202 Sum_probs=153.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..++..++||||+++++ ++.+.. ...+|+||||.+++|.+++.. ....+++..++.++.||+.||.|||+.
T Consensus 50 ~~e~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 127 (316)
T cd07842 50 CREIALLRELKHENVVSLVE-VFLEHA-DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN 127 (316)
T ss_pred HHHHHHHHhcCCCCccceEE-EEeCCC-CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 46778999999999999999 554432 236899999977789888732 123589999999999999999999999
Q ss_pred CceeccCCCCcEEEcc----CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 141 GIVVHNVRPSCFVMSS----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 141 gIvHrDLKP~NILl~~----~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+||||||+||+++. ++.+||+|||++.........
T Consensus 128 ~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------- 168 (316)
T cd07842 128 WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP--------------------------------------- 168 (316)
T ss_pred CEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc---------------------------------------
Confidence 9999999999999998 899999999887432111000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccch
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIw 295 (720)
........++++|+|||++.+. .++.++|||
T Consensus 169 ------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 200 (316)
T cd07842 169 ------------------------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIW 200 (316)
T ss_pred ------------------------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHH
Confidence 0000113678999999998765 489999999
Q ss_pred hhhchhhhccc---cCCCCchHH------------HHHHHhh------------------------cCCCC-cccc----
Q 004989 296 RLGVLLFELFC---PFSTGEEKT------------RTMSSLR------------------------HRVLP-PQLL---- 331 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~------------~~~~~l~------------------------~~~~p-~~~~---- 331 (720)
||||++|+|++ ||....... .....+. ....+ ..+.
T Consensus 201 slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (316)
T cd07842 201 AIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWME 280 (316)
T ss_pred HHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHH
Confidence 99999999999 554322110 0000000 00011 0000
Q ss_pred ---ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 332 ---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 332 ---~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
...+...+++.+||++||++|||+.|+++||||
T Consensus 281 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 281 KHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 122345599999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=260.59 Aligned_cols=204 Identities=17% Similarity=0.176 Sum_probs=160.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ .+..+. .+|+++|| .|++|.+++... .++++..+..++.||+.||.|||++|
T Consensus 46 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (258)
T cd05578 46 NVLNERRILQELNHPFLVNLWY-SFQDEE---NMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKG 120 (258)
T ss_pred HHHHHHHHHHhCCCCChHHHHH-hhcCCC---eEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457778999999999999999 444433 68999999 899999999654 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+.......
T Consensus 121 i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------------------------------------- 154 (258)
T cd05578 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---------------------------------------------- 154 (258)
T ss_pred eeccCCCHHHeEEcCCCCEEEeecccccccCCCc----------------------------------------------
Confidence 9999999999999999999999998774321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|+|||||++
T Consensus 155 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 189 (258)
T cd05578 155 ---------------------------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTA 189 (258)
T ss_pred ---------------------------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHH
Confidence 00013568889999999888899999999999999
Q ss_pred hhccc---cCCCCch--HHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCCh--HHHHcCccc
Q 004989 302 FELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKM--GELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~--~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta--~eiL~hp~~ 364 (720)
|+|++ ||..... .......... ..+..+..+| ...+++.+||..||.+||++ .|+++||||
T Consensus 190 ~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 190 YECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 99998 5554432 2223322221 2222223344 45599999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=265.10 Aligned_cols=222 Identities=15% Similarity=0.169 Sum_probs=162.2
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+..+. .+|++||| .|++|.+++...+ .+++..+..++.||+.||.|||+.||+
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~ 123 (305)
T cd05609 49 FVERDILTFAENPFVVSMFC-SFETKR---HLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNYGIV 123 (305)
T ss_pred HHHHHHHHhCCCCCeeeeEE-EEecCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36677889999999999998 444433 67999999 8999999995543 589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++++|||.+......... .+ .+.....
T Consensus 124 H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~-~~---------------------------~~~~~~~--------- 166 (305)
T cd05609 124 HRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT-NL---------------------------YEGHIEK--------- 166 (305)
T ss_pred ccCCchHHEEECCCCCEEEeeCCCccccCcCccc-cc---------------------------ccccccc---------
Confidence 9999999999999999999999987421110000 00 0000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
...........|+..|+|||.+.+..++.++|||||||++||
T Consensus 167 --------------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~e 208 (305)
T cd05609 167 --------------------------------------DTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYE 208 (305)
T ss_pred --------------------------------------chhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHH
Confidence 000000011357889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCC-CccccccC-chHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKF-PKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
|++ ||.+.... ........... .+...... +...+||.+||+++|++||+ +.++|+||||...
T Consensus 209 l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 209 FLVGCVPFFGDTPE-ELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 999 66654333 33333333221 12222233 34569999999999999997 7999999999775
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=271.55 Aligned_cols=218 Identities=18% Similarity=0.160 Sum_probs=155.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+++.++||||+++++ ++..+. .++++||| .+++|.+++.+. ...+++..++.++.||+.||+|||+.
T Consensus 45 ~~~~e~~~~~~l~h~niv~~~~-~~~~~~---~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 120 (328)
T cd08226 45 ALQNEVVLSHFFRHPNIMTSWT-VFTTGS---WLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN 120 (328)
T ss_pred HHHHHHHHHHhCCCCCcceEee-eEecCC---ceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4446777888899999999999 555543 57999999 889999999543 33589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++++||+.+...... .+..+.
T Consensus 121 ~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~----- 160 (328)
T cd08226 121 GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRN-----------------------------------GQKAKV----- 160 (328)
T ss_pred CeecCCCCHHHEEEeCCCcEEEechHHHhhhhcc-----------------------------------Cccccc-----
Confidence 9999999999999999999999888654211000 000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCccccchhhh
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLG 298 (720)
..+ .+ ....++..|+|||++.+. .++.++||||||
T Consensus 161 --------------------------~~~--------------~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG 197 (328)
T cd08226 161 --------------------------VYD--------------FP---QFSTSVLPWLSPELLRQDLYGYNVKSDIYSVG 197 (328)
T ss_pred --------------------------ccc--------------cc---ccccCccCccChhhhcCCCCCCCchhhHHHHH
Confidence 000 00 001346679999999764 378999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCc---------------------------------------------cc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---------------------------------------------QL 330 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---------------------------------------------~~ 330 (720)
|++|||++ ||............+......+ ..
T Consensus 198 ~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (328)
T cd08226 198 ITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSS 277 (328)
T ss_pred HHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhh
Confidence 99999998 5544333322222222111000 00
Q ss_pred cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 331 ~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
....+...+|+.+||..||++|||+.|+|+||||...
T Consensus 278 ~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 278 KTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred hhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 0112334599999999999999999999999999765
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=266.49 Aligned_cols=209 Identities=19% Similarity=0.318 Sum_probs=162.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ .+..+. ..|++||| .+++|.+++... .+++.+++.++.||+.||.|||++||
T Consensus 66 ~~~e~~~l~~l~h~~ii~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i 139 (292)
T cd06658 66 LFNEVVIMRDYHHENVVDMYN-SYLVGD---ELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGV 139 (292)
T ss_pred HHHHHHHHHhCCCCcHHHHHH-heecCC---eEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347778899999999999999 444433 67999999 889999988443 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++...... .
T Consensus 140 vH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-----------------------------------~------------ 172 (292)
T cd06658 140 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE-----------------------------------V------------ 172 (292)
T ss_pred eecCCCHHHEEEcCCCCEEEccCcchhhcccc-----------------------------------c------------
Confidence 99999999999999999999999887322100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+ ......|++.|+|||.+.+..++.++|||||||++|
T Consensus 173 ------------------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~ 209 (292)
T cd06658 173 ------------------------------------------P-KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 209 (292)
T ss_pred ------------------------------------------c-cCceeecCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 0 000135789999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccc---ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~---~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||++ ||...... ..+..+... .++.+. ...+...+|+.+||..||.+|||+.++++||||.....+
T Consensus 210 el~~g~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 210 EMIDGEPPYFNEPPL-QAMRRIRDN-LPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhc-CCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 9999 56544332 223333322 222211 223445699999999999999999999999999976443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-30 Score=259.41 Aligned_cols=214 Identities=18% Similarity=0.213 Sum_probs=161.5
Q ss_pred ccchhhchhhhhhcccCCCCCceecccceeec--CCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004989 58 NDFELRKHSDGVELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 58 ~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~--~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
.....|..||..++..++|+||++++.++... ......+|+|||+...+|.+.+. -.++-..+..|++|++.|+.
T Consensus 56 ~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik 132 (369)
T KOG0665|consen 56 QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIK 132 (369)
T ss_pred CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHH
Confidence 34555888999999999999999999944322 12233479999999999999885 23778899999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||+.||+||||||+||++..++.+|+.|||+++.-+. ||
T Consensus 133 ~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~-----------------------------------~~----- 172 (369)
T KOG0665|consen 133 HLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT-----------------------------------DF----- 172 (369)
T ss_pred HHHhcceeecccCcccceecchhheeeccchhhcccCc-----------------------------------cc-----
Confidence 99999999999999999999999999998888743211 11
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
..+.++.|..|+|||++.+..|...+|||
T Consensus 173 ---------------------------------------------------~mtpyVvtRyyrapevil~~~~ke~vdiw 201 (369)
T KOG0665|consen 173 ---------------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIW 201 (369)
T ss_pred ---------------------------------------------------ccCchhheeeccCchheeccCCcccchhh
Confidence 11236889999999999999999999999
Q ss_pred hhhchhhhcccc---CCCCchHHHH--------------HHHhh------------------cCCCCcc-----ccc---
Q 004989 296 RLGVLLFELFCP---FSTGEEKTRT--------------MSSLR------------------HRVLPPQ-----LLL--- 332 (720)
Q Consensus 296 SLGvll~eLltp---f~~~~~~~~~--------------~~~l~------------------~~~~p~~-----~~~--- 332 (720)
|+||++.||+++ |++....... +..+. ...+|.. ...
T Consensus 202 SvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~ 281 (369)
T KOG0665|consen 202 SVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKL 281 (369)
T ss_pred hhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCcc
Confidence 999999999982 3332211111 11110 0011111 111
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 333 ~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
......+++.+||..||++|.+++++|+||||+
T Consensus 282 ~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 282 DCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred chHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 111223899999999999999999999999998
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=262.58 Aligned_cols=207 Identities=19% Similarity=0.345 Sum_probs=163.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.... ..++++|| .|++|.+++.. ..+++.+++.++.||+.||.|||++||+
T Consensus 64 ~~e~~~l~~~~h~~vv~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~ 137 (285)
T cd06648 64 FNEVVIMRDYQHPNIVEMYS-SYLVGD---ELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVI 137 (285)
T ss_pred HHHHHHHHHcCCCChheEEE-EEEcCC---eEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36777899999999999999 444433 57999999 89999999965 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+...... .
T Consensus 138 H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~-----------------------------------~------------- 169 (285)
T cd06648 138 HRDIKSDSILLTSDGRVKLSDFGFCAQVSKE-----------------------------------V------------- 169 (285)
T ss_pred cCCCChhhEEEcCCCcEEEcccccchhhccC-----------------------------------C-------------
Confidence 9999999999999999999998876321110 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ ......|++.|+|||.+.+..++.++|||||||++||
T Consensus 170 -----------------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~e 207 (285)
T cd06648 170 -----------------------------------------P-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 207 (285)
T ss_pred -----------------------------------------c-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHH
Confidence 0 0001357899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccc---ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~---~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||...... ..+..+.... ++... ...+...+|+.+||+++|++||++.++++||||.....
T Consensus 208 ll~g~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 208 MVDGEPPYFNEPPL-QAMKRIRDNL-PPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HHhCCCCCcCCCHH-HHHHHHHhcC-CCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 999 66554332 3344444432 22211 12345569999999999999999999999999998754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-29 Score=261.23 Aligned_cols=193 Identities=21% Similarity=0.262 Sum_probs=150.1
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 004989 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
+||||+++++ .+.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||+.|++||||||+||+
T Consensus 67 ~h~~iv~~~~-~~~~~~---~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 141 (267)
T PHA03390 67 DNPNFIKLYY-SVTTLK---GHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL 141 (267)
T ss_pred cCCCEEEEEE-EEecCC---eeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEE
Confidence 7999999999 554443 68999999 8999999996544 6999999999999999999999999999999999999
Q ss_pred EccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcc
Q 004989 154 MSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 232 (720)
Q Consensus 154 l~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~ 232 (720)
++.++ .++++|||.+...+..
T Consensus 142 ~~~~~~~~~l~dfg~~~~~~~~---------------------------------------------------------- 163 (267)
T PHA03390 142 YDRAKDRIYLCDYGLCKIIGTP---------------------------------------------------------- 163 (267)
T ss_pred EeCCCCeEEEecCccceecCCC----------------------------------------------------------
Confidence 99888 9999988876322110
Q ss_pred ccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCC
Q 004989 233 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 309 (720)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~ 309 (720)
....|+..|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 164 ------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 207 (267)
T PHA03390 164 ------------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFK 207 (267)
T ss_pred ------------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 00246889999999998889999999999999999999 665
Q ss_pred CCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCC-hHHHHcCcccCC
Q 004989 310 TGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNE 366 (720)
Q Consensus 310 ~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt-a~eiL~hp~~~~ 366 (720)
...........+.. ....+.+....+...+||.+||+++|.+||+ ++++|+||||..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 208 EDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred CCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 33221111111111 1111222234456669999999999999996 699999999963
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=261.28 Aligned_cols=209 Identities=16% Similarity=0.177 Sum_probs=156.3
Q ss_pred chhhhhhcccC-CCCCceecccceeecCC---CCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEA---AIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~---~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..++.++ .||||+++++ ++.... ....+|++||| .+++|.+++... ...+++..++.++.||+.||.
T Consensus 49 ~~~e~~~l~~~~~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~ 127 (275)
T cd06608 49 IKEEYNILRKYSNHPNIATFYG-AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLA 127 (275)
T ss_pred HHHHHHHHHHhcCCCChheEEE-EEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 34677788887 7999999999 443332 24568999999 889999988432 356899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 128 ~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------------- 167 (275)
T cd06608 128 YLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL---------------------------------------- 167 (275)
T ss_pred HHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch----------------------------------------
Confidence 9999999999999999999999999999998773221000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-----CCCc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSC 290 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~~s~ 290 (720)
.......|++.|+|||++... .++.
T Consensus 168 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 197 (275)
T cd06608 168 --------------------------------------------------GRRNTFIGTPYWMAPEVIACDEQPDASYDA 197 (275)
T ss_pred --------------------------------------------------hhhcCccccccccCHhHhcccccccCCccc
Confidence 000013578899999998542 3788
Q ss_pred cccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++|||||||++|+|++ ||.......... .+.....+... ...++ ...+|+.+||..||++|||+.++++|||+
T Consensus 198 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 198 RSDVWSLGITAIELADGKPPLCDMHPMRALF-KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred cccHHHhHHHHHHHHhCCCCccccchHHHHH-HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 9999999999999999 665443332222 22222222111 11133 34599999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=257.18 Aligned_cols=204 Identities=18% Similarity=0.212 Sum_probs=159.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+++.++||||+++++ .+.+.. .+|++||| .+++|.+++.. .+..+++..++.++.||+.||.|||++
T Consensus 44 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 119 (255)
T cd08219 44 DSRKEAVLLAKMKHPNIVAFKE-SFEADG---HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK 119 (255)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEEECC---EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 3446777899999999999999 555443 67999999 89999999843 445589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++++|||.+....... .+
T Consensus 120 ~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~---------- 156 (255)
T cd08219 120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---------------------------------AY---------- 156 (255)
T ss_pred CcccCCCCcceEEECCCCcEEEcccCcceeecccc---------------------------------cc----------
Confidence 99999999999999999999999998873321110 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....|++.|+|||++.+..++.++|+||||++
T Consensus 157 -----------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i 189 (255)
T cd08219 157 -----------------------------------------------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCI 189 (255)
T ss_pred -----------------------------------------------cccccCCccccCHHHHccCCcCchhhhhhhchh
Confidence 001357889999999988889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|+|++ ||...... .....+..+..++..........+|+.+||..||.+||++.+++.-
T Consensus 190 ~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 190 LYELCTLKHPFQANSWK-NLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred heehhhccCCCCCCCHH-HHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 999998 66554332 3333444444433222233445699999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-30 Score=251.13 Aligned_cols=250 Identities=15% Similarity=0.129 Sum_probs=169.2
Q ss_pred cCCcccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceee-cCCCCCcEEE
Q 004989 27 DSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVH 98 (720)
Q Consensus 27 ~~~~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~-~~~~~~~~~l 98 (720)
..-+.+|.+|++- .+.+..+-+|+.+... +..-+.-+|+..-++++||||+++++.... ..+.....|+
T Consensus 24 ri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~---~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 24 RIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ---EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred EEeeeecCCCceeeeeecccCcccchhhheeeccch---HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 3445666666654 3455556666666442 222233366667888999999999983332 2224456899
Q ss_pred EEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEccCCceEEeecCcccCCC
Q 004989 99 AIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSG 172 (720)
Q Consensus 99 v~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g 172 (720)
+++| ..|+|.+.+. ..+..+++.+++.||.+|++||.+||+.. ++||||||.|||+++++.+++.|||.++...
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~ 180 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAP 180 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccc
Confidence 9999 9999999993 34546999999999999999999999998 9999999999999999999999999985421
Q ss_pred CCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 004989 173 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252 (720)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~ 252 (720)
..-. ..+ +...+.+.
T Consensus 181 i~i~-----------------------~~~----------------------------------------~a~~lQe~-- 195 (302)
T KOG2345|consen 181 IQIE-----------------------GSR----------------------------------------QALRLQEW-- 195 (302)
T ss_pred eEee-----------------------chH----------------------------------------HHHHHHHH--
Confidence 1100 000 00000000
Q ss_pred chhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccchhhhchhhhccc---cCCCCchHH--HHHHHhhcC
Q 004989 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFC---PFSTGEEKT--RTMSSLRHR 324 (720)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~eLlt---pf~~~~~~~--~~~~~l~~~ 324 (720)
.....|..|+|||.+.-.. .+.++|||||||+||+|+. ||......- .+.......
T Consensus 196 ----------------a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q 259 (302)
T KOG2345|consen 196 ----------------AEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQ 259 (302)
T ss_pred ----------------HHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccc
Confidence 0123488899999996443 7899999999999999998 665421110 001111111
Q ss_pred CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 325 VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 325 ~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
...|.-........+||++||++||.+||++.+++.
T Consensus 260 ~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 260 ISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred cccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 111222222233449999999999999999999986
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-29 Score=257.95 Aligned_cols=204 Identities=14% Similarity=0.140 Sum_probs=156.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ +++.. .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|+
T Consensus 42 ~~~E~~~l~~l~h~~ii~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 116 (257)
T cd05115 42 MMREAEIMHQLDNPYIVRMIG-VCEAE----ALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF 116 (257)
T ss_pred HHHHHHHHHhcCCCCeEEEEE-EEcCC----CeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 447788999999999999999 55432 47999999 8999999996555569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 117 ~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 151 (257)
T cd05115 117 VHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY--------------------------------------------- 151 (257)
T ss_pred eecccchheEEEcCCCcEEeccCCccccccCCccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.. ......++..|+|||.+.+..++.++|||||||++|
T Consensus 152 ----------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 189 (257)
T cd05115 152 ----------------------YK--------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMW 189 (257)
T ss_pred ----------------------ee--------------------ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHH
Confidence 00 000012357899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+++.+||..+|++||++.+|++
T Consensus 190 el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 190 EAFSYGQKPYKKMKGP-EVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHhcCCCCCcCcCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9985 55544333 344444444333322333455569999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=258.19 Aligned_cols=203 Identities=16% Similarity=0.211 Sum_probs=155.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||+.||+
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 122 (256)
T cd05113 47 IEEAKVMMKLSHEKLVQLYG-VCTKQR---PIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFI 122 (256)
T ss_pred HHHHHHHhcCCCCCeeeEEE-EEccCC---CcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 46778899999999999999 554433 57999999 88999999965544689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.+||+|||.+....... +
T Consensus 123 H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~----------------------------------~------------- 155 (256)
T cd05113 123 HRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE----------------------------------Y------------- 155 (256)
T ss_pred ccccCcceEEEcCCCCEEECCCccceecCCCc----------------------------------e-------------
Confidence 99999999999999999999988763321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. ......++..|+|||.+.+..++.++|||||||++|+
T Consensus 156 -----------------------~-------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~ 193 (256)
T cd05113 156 -----------------------T-------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWE 193 (256)
T ss_pred -----------------------e-------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHH
Confidence 0 0000234678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|++ ||...... .....+.....++......+...+++.+||+++|.+||++.+|+.+
T Consensus 194 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 194 VYSLGKMPYERFNNS-ETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HhcCCCCCcCcCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 997 55443332 3333344333332222233455699999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=262.33 Aligned_cols=204 Identities=19% Similarity=0.196 Sum_probs=154.1
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC-Cceec
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 145 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvHr 145 (720)
.++.++||||+++++ .+..+. .+|++|||..++|.+++.. ....+++..++.++.||+.||.|||++ +++||
T Consensus 53 ~~~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~ 128 (283)
T cd06617 53 SMRSVDCPYTVTFYG-ALFREG---DVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHR 128 (283)
T ss_pred HHHHcCCCCeeeeeE-EEecCC---cEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 456689999999999 444333 5799999977899888733 334589999999999999999999997 99999
Q ss_pred cCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccc
Q 004989 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.+||+|||.+.......
T Consensus 129 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------- 158 (283)
T cd06617 129 DVKPSNVLINRNGQVKLCDFGISGYLVDSV-------------------------------------------------- 158 (283)
T ss_pred CCCHHHEEECCCCCEEEeeccccccccccc--------------------------------------------------
Confidence 999999999999999999998873221000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC----CCCCccccchhhhchh
Q 004989 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLL 301 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+ ..++.++|||||||++
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l 197 (283)
T cd06617 159 -----------------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITM 197 (283)
T ss_pred -----------------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHH
Confidence 0001356889999999865 3478999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||..................+......++ ...+|+.+||..+|.+||++.++++||||....
T Consensus 198 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 198 IELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred HHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 99999 55443222222333333322222222334 445999999999999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-29 Score=257.37 Aligned_cols=201 Identities=14% Similarity=0.130 Sum_probs=155.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+++.++||||+++++ ++..+ .++++||| .+++|.+++.... .+++..+..++.||+.||.|||++||+|
T Consensus 45 ~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H 118 (257)
T cd05116 45 REANVMQQLDNPYIVRMIG-ICEAE----SWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEETNFVH 118 (257)
T ss_pred HHHHHHHhCCCCCcceEEE-EEcCC----CcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 6778999999999999999 55432 46899999 8899999995443 4899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||.||+++.++.++|+|||.+...+.... +
T Consensus 119 ~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~-------------- 151 (257)
T cd05116 119 RDLAARNVLLVTQHYAKISDFGLSKALGADEN---------------------------------Y-------------- 151 (257)
T ss_pred cccchhhEEEcCCCeEEECCCccccccCCCCC---------------------------------e--------------
Confidence 99999999999999999999888743321100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
. .......++..|+|||.+....++.++|||||||++|||
T Consensus 152 ~----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 191 (257)
T cd05116 152 Y----------------------------------------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEA 191 (257)
T ss_pred e----------------------------------------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHH
Confidence 0 000002346789999999888899999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||...... .....+..+..++......++..+||.+||.+||++||++.+|.+
T Consensus 192 ~t~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 192 FSYGQKPYKGMKGN-EVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HhCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 96 55544332 444455554443333334456669999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=267.09 Aligned_cols=220 Identities=17% Similarity=0.200 Sum_probs=171.8
Q ss_pred cchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 59 DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 59 ~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+.+| .|..||.++.||.||.+-. .|+..+ .+++|||-..|+..+.| ....+.+++...+.++.||+.||.||
T Consensus 607 esqlR--~EVaILq~l~HPGiV~le~-M~ET~e---rvFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~L 680 (888)
T KOG4236|consen 607 ESQLR--NEVAILQNLHHPGIVNLEC-MFETPE---RVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYL 680 (888)
T ss_pred HHHHH--HHHHHHHhcCCCCeeEEEE-eecCCc---eEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHh
Confidence 34445 4667999999999999988 566654 57999999666766666 44445599999999999999999999
Q ss_pred HHCCceeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 138 HSQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|-+||||+||||+|||+.+ .-++||||||+|+..|... |
T Consensus 681 H~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks----------------------------------F---- 722 (888)
T KOG4236|consen 681 HFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS----------------------------------F---- 722 (888)
T ss_pred hhcceeeccCCchheeeccCCCCCceeeccccceeecchhh----------------------------------h----
Confidence 9999999999999999973 3578888888886654431 1
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
....+|||.|+|||++....|..+-|+
T Consensus 723 -----------------------------------------------------RrsVVGTPAYLaPEVLrnkGyNrSLDM 749 (888)
T KOG4236|consen 723 -----------------------------------------------------RRSVVGTPAYLAPEVLRNKGYNRSLDM 749 (888)
T ss_pred -----------------------------------------------------hhhhcCCccccCHHHHhhccccccccc
Confidence 112689999999999999999999999
Q ss_pred hhhhchhhhccccCCCCchHHHHHHHhhcC--CCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCccch
Q 004989 295 YRLGVLLFELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 295 wSLGvll~eLltpf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
||+|||+|--|.+-.++++...+...|.+. .+|+..+.+.+.++ +||..+|+..-.+|.+++..|.|||++....-+
T Consensus 750 WSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~ 829 (888)
T KOG4236|consen 750 WSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWL 829 (888)
T ss_pred eeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHH
Confidence 999999999998333333333334444432 35666666665555 999999999999999999999999999985544
Q ss_pred HHHH
Q 004989 372 EERE 375 (720)
Q Consensus 372 ~e~~ 375 (720)
.-++
T Consensus 830 DLRe 833 (888)
T KOG4236|consen 830 DLRE 833 (888)
T ss_pred HHHH
Confidence 4433
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=269.01 Aligned_cols=219 Identities=17% Similarity=0.202 Sum_probs=159.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++.+.... .....+|++|||.+++|.+++... .+++..++.++.||+.||.|||+.|
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 49 RTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred HHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999433222 123457999999777999888443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++......... .
T Consensus 127 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~----------- 163 (336)
T cd07849 127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH--------------------------------T----------- 163 (336)
T ss_pred eeccCCCHHHEEECCCCCEEECcccceeeccccccc--------------------------------c-----------
Confidence 999999999999999999999999887432111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
. ......||+.|+|||.+.+ ..++.++|||||||+
T Consensus 164 ----------------------------------------~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvi 199 (336)
T cd07849 164 ----------------------------------------G----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCI 199 (336)
T ss_pred ----------------------------------------C----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHH
Confidence 0 0011467999999998765 458999999999999
Q ss_pred hhhccc---cCCCCchHHHH--HHHhhcCC-------------------CC--c------cccccCchHHHHHHHcCCCC
Q 004989 301 LFELFC---PFSTGEEKTRT--MSSLRHRV-------------------LP--P------QLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~--~~~l~~~~-------------------~p--~------~~~~~~p~~~~Li~~~L~~d 348 (720)
+|+|++ ||......... +..+.... .+ + ......+...+|+.+||+.+
T Consensus 200 l~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 279 (336)
T cd07849 200 LAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN 279 (336)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC
Confidence 999999 55443221110 00000000 00 0 01122345569999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004989 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|||+.|+++||||....+.
T Consensus 280 P~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 280 PHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hhhCcCHHHHhcCccccccCCC
Confidence 9999999999999999988654
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-29 Score=257.29 Aligned_cols=207 Identities=17% Similarity=0.231 Sum_probs=162.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
....|..++++++||||+++++ ++.... ..|++||| .+++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08218 45 ESRKEVAVLSNMKHPNIVQYQE-SFEENG---NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR 120 (256)
T ss_pred HHHHHHHHHHhCCCCCeeeeEe-eecCCC---eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3446777999999999999999 444433 67999999 89999999854 334589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||+|+||+++.++.++++|||.+........
T Consensus 121 ~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08218 121 KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE-------------------------------------------- 156 (256)
T ss_pred CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh--------------------------------------------
Confidence 999999999999999999999999987732211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||++.+..++.++|+|||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i 190 (256)
T cd08218 157 ----------------------------------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCV 190 (256)
T ss_pred ----------------------------------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHH
Confidence 0001357888999999988889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||....... ....+..+..++......+...++|.+||+.+|.+||++.++++||||
T Consensus 191 ~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 191 LYEMCTLKHAFEAGNMKN-LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHHcCCCCccCCCHHH-HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999 555544433 333333444443333334456699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-29 Score=258.71 Aligned_cols=217 Identities=17% Similarity=0.216 Sum_probs=163.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ .+..+ ..+|++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 39 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~ 113 (265)
T cd05579 39 QVLTERDILSQAQSPYVVKLYY-SFQGK---KNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNG 113 (265)
T ss_pred HHHHHHHHHHhCCCcchhHHHH-heecC---cEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 4446777899999999999998 44443 267999999 7899999996544 5999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||++......... ..
T Consensus 114 i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~----------- 151 (265)
T cd05579 114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI-------------------------------NL----------- 151 (265)
T ss_pred eecCCCCHHHeEEcCCCCEEEEecccchhcccCccc-------------------------------cc-----------
Confidence 999999999999999999999999987432111000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
...........++..|+|||.+.+..++.++|||||||++
T Consensus 152 ----------------------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~ 191 (265)
T cd05579 152 ----------------------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCIL 191 (265)
T ss_pred ----------------------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHH
Confidence 0000000114578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCCh---HHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta---~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+....++ +......+...+|+.+||+.+|.+|||+ .++|+||||+..
T Consensus 192 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 192 YEFLVGIPPFHGETPE-EIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 99999 56544433 233333332222 2221223455699999999999999999 999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=259.82 Aligned_cols=197 Identities=12% Similarity=0.122 Sum_probs=146.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++..++||||+++++ ++.... ..+++||| .+++|..++......+++..++.++.||+.||+|||++||
T Consensus 51 ~~~~~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 126 (262)
T cd05077 51 FFETASMMRQVSHKHIVLLYG-VCVRDV---ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDL 126 (262)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCe
Confidence 345677899999999999999 444443 45899999 8899999886555569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc-------eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 143 VVHNVRPSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~-------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
+||||||+|||++.++. ++++|||.+......
T Consensus 127 vH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~----------------------------------------- 165 (262)
T cd05077 127 VHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR----------------------------------------- 165 (262)
T ss_pred ECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc-----------------------------------------
Confidence 99999999999986654 666666554211000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-CCCCCccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDI 294 (720)
....++..|+|||.+. +..++.++||
T Consensus 166 -----------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Di 192 (262)
T cd05077 166 -----------------------------------------------------QECVERIPWIAPECVEDSKNLSIAADK 192 (262)
T ss_pred -----------------------------------------------------ccccccccccChhhhcCCCCCCchhHH
Confidence 0135678899999986 4558999999
Q ss_pred hhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||++|||++ ||...... ....+.....+ ......+...+|+.+||+.||.+||++.+|+++
T Consensus 193 wslG~~l~el~~~~~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 193 WSFGTTLWEICYNGEIPLKDKTLA--EKERFYEGQCM-LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHHHHHHHHhCCCCCCCCcchh--HHHHHHhcCcc-CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 999999999984 44433221 11112222111 111223455699999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-29 Score=264.80 Aligned_cols=204 Identities=16% Similarity=0.150 Sum_probs=150.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------------------CCCCHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------------RSVDVYECL 124 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------------------~~l~~~~~~ 124 (720)
..+|..+|.+++||||+++++ ++.+.. .++++||| .+++|.+++.... ..+++..++
T Consensus 66 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (304)
T cd05096 66 FLKEVKILSRLKDPNIIRLLG-VCVDED---PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLL 141 (304)
T ss_pred HHHHHHHHhhcCCCCeeEEEE-EEecCC---ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHH
Confidence 346788999999999999999 554443 57999999 8999999984321 236778899
Q ss_pred HHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhc
Q 004989 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 125 ~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 142 ~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~------------------------------ 191 (304)
T cd05096 142 HVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAG------------------------------ 191 (304)
T ss_pred HHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccC------------------------------
Confidence 99999999999999999999999999999999999999999887432110
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc
Q 004989 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
+. .. ......++..|+|||++.
T Consensus 192 ----~~----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~ 213 (304)
T cd05096 192 ----DY----------------------------------YR--------------------IQGRAVLPIRWMAWECIL 213 (304)
T ss_pred ----ce----------------------------------eE--------------------ecCcCCCCccccCHHHHh
Confidence 00 00 000124578899999998
Q ss_pred CCCCCccccchhhhchhhhccc-----cCCCCchHHHHHHHh----hc---CCCCccccccCchHHHHHHHcCCCCCCCC
Q 004989 285 GAPVSCASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSL----RH---RVLPPQLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 285 ~~~~s~~sDIwSLGvll~eLlt-----pf~~~~~~~~~~~~l----~~---~~~p~~~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
+..++.++|||||||++|||++ ||...... ...... .. ...+.......+...+|+.+||..||++|
T Consensus 214 ~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 292 (304)
T cd05096 214 MGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE-QVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRER 292 (304)
T ss_pred cCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH-HHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhC
Confidence 8889999999999999999985 55543322 111111 11 11111111222345599999999999999
Q ss_pred CChHHHHc
Q 004989 353 PKMGELLQ 360 (720)
Q Consensus 353 pta~eiL~ 360 (720)
||+.+|.+
T Consensus 293 Ps~~~i~~ 300 (304)
T cd05096 293 PSFSDIHA 300 (304)
T ss_pred cCHHHHHH
Confidence 99999954
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=261.60 Aligned_cols=207 Identities=19% Similarity=0.255 Sum_probs=161.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ .+.++. .+|+|||| .|++|.+++... ++++..+..++.||+.||+|||+.|
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 48 DIQQEITVLSQCDSPYVTKYYG-SYLKGT---KLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---EEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4446778999999999999999 555443 68999999 899999999543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++++|||.+...... +.
T Consensus 122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~----------------------------------~~----------- 156 (277)
T cd06640 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT----------------------------------QI----------- 156 (277)
T ss_pred ccCcCCChhhEEEcCCCCEEEcccccceeccCC----------------------------------cc-----------
Confidence 999999999999999999999998877332110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|+|||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06640 157 ---------------------------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITA 191 (277)
T ss_pred ---------------------------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+... .++.+.... +...+|+.+||+.+|++||++.++++||||...
T Consensus 192 ~el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 192 IELAKGEPPNSDMHPM-RVLFLIPKN-NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred HHHHHCCCCCCCcChH-hHhhhhhcC-CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 99999 44433322 222222222 233333333 344599999999999999999999999999765
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-29 Score=269.41 Aligned_cols=241 Identities=19% Similarity=0.232 Sum_probs=170.1
Q ss_pred cccccCCcccccccccC------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcE
Q 004989 23 WQDSDSSRALNISGVSD------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPF 96 (720)
Q Consensus 23 ~~~~~~~~~~~~~~~~~------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~ 96 (720)
..+.+..+.+|.++++. .+...++++|........ ......|..+|++++|||+|+|+| +|.+... ..
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG-yC~e~~~--~~ 147 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG-YCLEGGE--HR 147 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE-EEecCCc--eE
Confidence 34444455555555444 222445555433332221 222447888999999999999999 6654442 46
Q ss_pred EEEEec-CCCCHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCcEEEccCCceEEeecCcccCC
Q 004989 97 VHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 97 ~lv~E~-~ggsL~~~L~~~~~-~l~~~~~~~i~~QIl~aL~yLHs~---gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
++|+|| ..|+|.++|..... ++++...++|+.+++.||+|||.. .||||||||+|||||.+.++||+|||+|+..
T Consensus 148 ~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~ 227 (361)
T KOG1187|consen 148 LLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLG 227 (361)
T ss_pred EEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccC
Confidence 999999 88999999955544 799999999999999999999984 3999999999999999999999888887322
Q ss_pred CC-CCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccc
Q 004989 172 GS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDN 250 (720)
Q Consensus 172 g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~ 250 (720)
.. ..
T Consensus 228 ~~~~~--------------------------------------------------------------------------- 232 (361)
T KOG1187|consen 228 PEGDT--------------------------------------------------------------------------- 232 (361)
T ss_pred Ccccc---------------------------------------------------------------------------
Confidence 11 00
Q ss_pred ccchhhhhcccCCCCcccccc-ccCCcccCcccccCCCCCccccchhhhchhhhcccc---CCCCc------hHHHHHHH
Q 004989 251 RVNVEQVEEKKQPFPMKQILL-METNWYASPEELAGAPVSCASDIYRLGVLLFELFCP---FSTGE------EKTRTMSS 320 (720)
Q Consensus 251 g~~~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp---f~~~~------~~~~~~~~ 320 (720)
..... .||.+|+|||.+..+..+.++|||||||+|.||+++ ..... -.......
T Consensus 233 ----------------~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 233 ----------------SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred ----------------ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 00001 689999999999888899999999999999999993 22211 11111222
Q ss_pred hhc----CCCCcccc-ccCc--h----HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 321 LRH----RVLPPQLL-LKFP--K----EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 321 l~~----~~~p~~~~-~~~p--~----~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.. .++.|.+. ..++ + .+.+..+|++.+|..||++.|+++
T Consensus 297 ~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 297 LEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 222 23445544 3443 2 237889999999999999999754
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=261.40 Aligned_cols=208 Identities=18% Similarity=0.217 Sum_probs=155.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++.+++||||+++++.+. ... ....|++|||.+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 52 ~~e~~~l~~l~h~ni~~~~~~~~-~~~-~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H 129 (293)
T cd07843 52 LREINILLKLQHPNIVTVKEVVV-GSN-LDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILH 129 (293)
T ss_pred HHHHHHHHhcCCCCEEEEEEEEE-ecC-CCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 46778899999999999999433 331 2368999999667999999655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+...+.... .
T Consensus 130 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------------------------~--------------- 162 (293)
T cd07843 130 RDLKTSNLLLNNRGILKICDFGLAREYGSPLK--------------------------------P--------------- 162 (293)
T ss_pred ccCCHHHEEECCCCcEEEeecCceeeccCCcc--------------------------------c---------------
Confidence 99999999999999999999998743321100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
.....+++.|+|||.+.+.. ++.++|||||||++|+
T Consensus 163 -------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~ 199 (293)
T cd07843 163 -------------------------------------------YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAE 199 (293)
T ss_pred -------------------------------------------cccccccccccCchhhcCCccccchhhHHHHHHHHHH
Confidence 00124688999999987654 6899999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--------------------C--------CCCcccccc--CchHHHHHHHcCCCCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH--------------------R--------VLPPQLLLK--FPKEASFCLWLLHPEPS 350 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--------------------~--------~~p~~~~~~--~p~~~~Li~~~L~~dP~ 350 (720)
|++ ||............... . .+...+... .+...+||.+||+.+|+
T Consensus 200 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 279 (293)
T cd07843 200 LLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPA 279 (293)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcc
Confidence 999 44433222111111000 0 000111111 23445999999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||+.|+|+||||
T Consensus 280 ~R~t~~ell~~~~f 293 (293)
T cd07843 280 KRISAEDALKHPYF 293 (293)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999997
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=258.24 Aligned_cols=206 Identities=20% Similarity=0.264 Sum_probs=157.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++.+++||||+++++ ++.... .+++|||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++|++|
T Consensus 57 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H 131 (272)
T cd06629 57 SEIETLKDLDHLNIVQYLG-FETTEE---YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSKGILH 131 (272)
T ss_pred HHHHHHHhcCCCCcceEEE-EeccCC---ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeee
Confidence 6778999999999999999 554443 57999999 8999999996553 5899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||+|+||+++.++.++++|||.+....... ..
T Consensus 132 ~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------------------------~~-------------- 164 (272)
T cd06629 132 RDLKADNLLVDADGICKISDFGISKKSDDIY---------------------------------DN-------------- 164 (272)
T ss_pred cCCChhhEEEcCCCeEEEeeccccccccccc---------------------------------cc--------------
Confidence 9999999999999999999998873321000 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchhhhchhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLF 302 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLGvll~ 302 (720)
.......|+..|+|||.+.... ++.++|+||||+++|
T Consensus 165 -----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~ 203 (272)
T cd06629 165 -----------------------------------------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVL 203 (272)
T ss_pred -----------------------------------------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHH
Confidence 0001135788999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~---~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||............... ..+++......+ ...+|+.+||.++|..||++.++|+||||
T Consensus 204 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 204 EMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 9999 55443333222221111 122222222333 44599999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=265.29 Aligned_cols=203 Identities=15% Similarity=0.150 Sum_probs=152.8
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++..+. .+|++||| .+++|.+++.+.. ..+++..++.
T Consensus 53 ~~~~Ei~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 128 (303)
T cd05088 53 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 128 (303)
T ss_pred HHHHHHHHHHHhcCCCCcceEEE-EECCCC---CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHH
Confidence 334677788888 8999999999 554443 57999999 8999999995322 2478999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 129 ~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~------------------------------- 177 (303)
T cd05088 129 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY------------------------------- 177 (303)
T ss_pred HHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh-------------------------------
Confidence 9999999999999999999999999999999999999998876311000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
. ......++..|+|||.+.+
T Consensus 178 ------~------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 197 (303)
T cd05088 178 ------V------------------------------------------------------KKTMGRLPVRWMAIESLNY 197 (303)
T ss_pred ------h------------------------------------------------------hcccCCCcccccCHHHHhc
Confidence 0 0000123567999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.+|++||++.+++++
T Consensus 198 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 198 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred cCCcccccchhhhhHHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 889999999999999999996 55443332 2333333222222222233555699999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=251.30 Aligned_cols=201 Identities=18% Similarity=0.236 Sum_probs=163.4
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCC
Q 004989 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRP 149 (720)
Q Consensus 71 L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP 149 (720)
+...+.|.||+.|| +|..+. .+++.||..+.-+..+|+.-..+++|..+-++..-++.||.||-. +||||||+||
T Consensus 145 ~~s~dcpyIV~c~G-yFi~n~---dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKP 220 (391)
T KOG0983|consen 145 LKSHDCPYIVQCFG-YFITNT---DVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKP 220 (391)
T ss_pred hhccCCCeeeeeee-EEeeCc---hHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCc
Confidence 33455899999999 444433 358899998778888887767779999999999999999999996 6999999999
Q ss_pred CcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCC
Q 004989 150 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 229 (720)
Q Consensus 150 ~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~ 229 (720)
+|||++..|++||||||++-.. .|- +
T Consensus 221 SNILlDe~GniKlCDFGIsGrl------------------------------------vdS---k--------------- 246 (391)
T KOG0983|consen 221 SNILLDERGNIKLCDFGISGRL------------------------------------VDS---K--------------- 246 (391)
T ss_pred cceEEccCCCEEeeccccccee------------------------------------ecc---c---------------
Confidence 9999999999999999987211 110 0
Q ss_pred CccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC---CCCccccchhhhchhhhccc
Q 004989 230 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll~eLlt 306 (720)
..+...|.+.|||||-+.-. .|+-.+||||||+.|+||.|
T Consensus 247 -------------------------------------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT 289 (391)
T KOG0983|consen 247 -------------------------------------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELAT 289 (391)
T ss_pred -------------------------------------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhc
Confidence 01124689999999998544 39999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCccccc---cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLL---KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~---~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||........++..+.+. .||.+.. ..|...+|+..||.+|+.+||.-.++|+|||+...
T Consensus 290 g~yPy~~c~tdFe~ltkvln~-ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 290 GQYPYKGCKTDFEVLTKVLNE-EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred ccCCCCCCCccHHHHHHHHhc-CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 888877777888777764 4454433 45778899999999999999999999999999886
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=261.35 Aligned_cols=207 Identities=16% Similarity=0.206 Sum_probs=158.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..+|..++||||+++++ .++... .+|++||| .+++|.+++.+.. ..+++.+++.++.||+.||.|||+.|+
T Consensus 41 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 116 (277)
T cd05577 41 LNEKKILEKVSSRFIVSLAY-AFETKD---DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRI 116 (277)
T ss_pred HHHHHHHHhCCCCCEeeeee-EEecCC---eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 36778899999999999998 554443 67999999 8899999995433 358999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||+|+||+++.++.++|+|||.+...... ..
T Consensus 117 ~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---------------------------------~~------------- 150 (277)
T cd05577 117 VYRDLKPENVLLDDHGNVRISDLGLAVELKGG---------------------------------KK------------- 150 (277)
T ss_pred ccCCCCHHHEEECCCCCEEEccCcchhhhccC---------------------------------Cc-------------
Confidence 99999999999999999999999876321100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....++..|+|||.+.+..++.++|||||||++|
T Consensus 151 ---------------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~ 185 (277)
T cd05577 151 ---------------------------------------------IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLY 185 (277)
T ss_pred ---------------------------------------------cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHH
Confidence 00124678899999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--CCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|++ ||....... ....+... ..+..... ..+...+||.+||+.||.+|| ++.+++.||||...
T Consensus 186 ~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 186 EMIAGRSPFRQRKEKV-EKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred HHhhCCCCCCCCcccc-cHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 9999 665432210 11111111 11222222 234556999999999999999 88889999999865
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=271.58 Aligned_cols=212 Identities=16% Similarity=0.219 Sum_probs=158.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++.+++||||+++++ ++.... ....+|+++++.|++|.+++... .+++..++.++.||+.||.|||+
T Consensus 62 ~~~~Ei~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~ 138 (345)
T cd07877 62 RTYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHS 138 (345)
T ss_pred HHHHHHHHHHHcCCCcccceee-eeeecccccccccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 3446788999999999999999 443322 22347899999889999988543 38999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.++|+|||++......
T Consensus 139 ~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~--------------------------------------------- 173 (345)
T cd07877 139 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------------------------------------------- 173 (345)
T ss_pred CCeeecCCChHHEEEcCCCCEEEeccccccccccc---------------------------------------------
Confidence 99999999999999999999999998876321000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....|+++|+|||.+.+ ..++.++||||||
T Consensus 174 ------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG 205 (345)
T cd07877 174 ------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 205 (345)
T ss_pred ------------------------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHH
Confidence 001356889999999876 4588999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CC-----------------------CCc-c----ccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RV-----------------------LPP-Q----LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~-----------------------~p~-~----~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||............+.. .. .+. . +....+...+||.+||+
T Consensus 206 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 285 (345)
T cd07877 206 CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 285 (345)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcC
Confidence 99999998 55443322111111100 00 000 0 11223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||.+||++.++++||||.+...+
T Consensus 286 ~dp~~R~t~~e~l~h~~f~~~~~~ 309 (345)
T cd07877 286 LDSDKRITAAQALAHAYFAQYHDP 309 (345)
T ss_pred CChhhcCCHHHHhcChhhhhcCCC
Confidence 999999999999999999976443
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=259.85 Aligned_cols=204 Identities=15% Similarity=0.097 Sum_probs=154.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|...+++++||||+++++ ++... ..++++|| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 55 ~~~~~~~~l~~l~h~~iv~~~~-~~~~~----~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 129 (279)
T cd05111 55 EITDHMLAMGSLDHAYIVRLLG-ICPGA----SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR 129 (279)
T ss_pred HHHHHHHHHhcCCCCCcceEEE-EECCC----ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3346777889999999999999 44322 35788999 899999999665566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.+||+|||.++....... ..
T Consensus 130 iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~--------------------------------~~----------- 166 (279)
T cd05111 130 MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK--------------------------------KY----------- 166 (279)
T ss_pred EeccccCcceEEEcCCCcEEEcCCccceeccCCCc--------------------------------cc-----------
Confidence 99999999999999999999999988743211100 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 167 ---------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 201 (279)
T cd05111 167 ---------------------------------------------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTV 201 (279)
T ss_pred ---------------------------------------------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHH
Confidence 00012457789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++..........+++.+||..||+.|||+.|+++
T Consensus 202 ~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 202 WEMMSYGAEPYAGMRPH-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred HHHHcCCCCCCCCCCHH-HHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99997 55443322 223333333333222222234569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=255.87 Aligned_cols=202 Identities=17% Similarity=0.203 Sum_probs=154.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+|..++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 122 (256)
T cd05114 47 IEEAKVMMKLSHPKLVQLYG-VCTQQK---PLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFI 122 (256)
T ss_pred HHHHHHHHHCCCCCceeEEE-EEccCC---CEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777999999999999999 554443 57999999 89999999965444589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++++|||.+.........
T Consensus 123 H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~---------------------------------------------- 156 (256)
T cd05114 123 HRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT---------------------------------------------- 156 (256)
T ss_pred ccccCcceEEEcCCCeEEECCCCCccccCCCcee----------------------------------------------
Confidence 9999999999999999999998877432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~e 193 (256)
T cd05114 157 -------------------------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWE 193 (256)
T ss_pred -------------------------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHH
Confidence 0000134567999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....+.......+...+|+.+||..+|.+||++.++++
T Consensus 194 l~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 194 VFTEGKMPFEKKSNY-EVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHcCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 998 55444333 333444433222221122344569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=255.40 Aligned_cols=210 Identities=20% Similarity=0.245 Sum_probs=160.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
....|..++.+++||||+++++ ++... ..+++++|| .+++|.+++.+. ..+++..++.++.||+.||.|||+.|
T Consensus 45 ~~~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~ 119 (264)
T cd06626 45 EIADEMKVLELLKHPNLVKYYG-VEVHR---EKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHG 119 (264)
T ss_pred HHHHHHHHHHhCCCCChhheee-eEecC---CEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCC
Confidence 4447777999999999999999 44333 368999999 899999999554 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||.+.......... ..+
T Consensus 120 i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-----------------------------~~~----------- 159 (264)
T cd06626 120 IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-----------------------------GEE----------- 159 (264)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-----------------------------ccc-----------
Confidence 9999999999999999999999999874432210000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccchhhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLG 298 (720)
.....+++.|+|||.+.+.. ++.++||||||
T Consensus 160 ----------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G 193 (264)
T cd06626 160 ----------------------------------------------VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLG 193 (264)
T ss_pred ----------------------------------------------ccCCcCCcCccChhhccCCCCCCCCcccchHHHH
Confidence 00135688999999998766 89999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccc---cCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL---KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~---~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++|+|++ ||............+.... ++.++. ..+...+|+.+||+.+|.+|||+.+++.|||+
T Consensus 194 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 194 CVVLEMATGKRPWSELDNEFQIMFHVGAGH-KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHhCCCCccCCcchHHHHHHHhcCC-CCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 99999999 6654433323222233222 222222 24555699999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-29 Score=261.33 Aligned_cols=204 Identities=19% Similarity=0.184 Sum_probs=156.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------------CCCCHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------RSVDVYECLHIFRQI 130 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------------~~l~~~~~~~i~~QI 130 (720)
..+|..++.+++||||+++++ ++.... .++++||| .+++|.++|...+ ..+++..++.++.||
T Consensus 54 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql 129 (288)
T cd05093 54 FHREAELLTNLQHEHIVKFYG-VCVEGD---PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQI 129 (288)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHH
Confidence 346778999999999999999 554433 57999999 8999999995322 248999999999999
Q ss_pred HHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 131 l~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+.||+|||++||+||||||+||+++.++.++|+|||.+....... .
T Consensus 130 ~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~ 175 (288)
T cd05093 130 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD----------------------------------Y 175 (288)
T ss_pred HHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCc----------------------------------e
Confidence 999999999999999999999999999999999998874321110 0
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
........+++.|+|||.+.+..++.
T Consensus 176 ------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ 201 (288)
T cd05093 176 ------------------------------------------------------YRVGGHTMLPIRWMPPESIMYRKFTT 201 (288)
T ss_pred ------------------------------------------------------eecCCCCCccccccCHHHhccCCCCc
Confidence 00000124577899999998888999
Q ss_pred cccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||||||++|+|++ ||...... .....+.....++......+...+|+.+||++||.+|||+.+++.
T Consensus 202 ~sDiwslG~il~~l~t~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 202 ESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9999999999999997 44443332 333444444333322233345669999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-29 Score=259.67 Aligned_cols=205 Identities=14% Similarity=0.101 Sum_probs=154.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------CCCCHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------~~l~~~~~~~i~~QIl~a 133 (720)
..+|..++..++||||+++++ ++.... ..+++||| .+++|.+++.+.. ..++...+..++.||+.|
T Consensus 56 ~~~e~~~l~~l~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 131 (277)
T cd05062 56 FLNEASVMKEFNCHHVVRLLG-VVSQGQ---PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG 131 (277)
T ss_pred HHHHHHHHHhCCCCCeeeEEE-EEcCCC---CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHH
Confidence 347778999999999999999 454333 57999999 9999999994321 235778899999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||+.|++||||||+||+++.++.++++|||++.........
T Consensus 132 l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------ 175 (277)
T cd05062 132 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY------------------------------------ 175 (277)
T ss_pred HHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee------------------------------------
Confidence 99999999999999999999999999999999887432111000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+++.|+|||++.+..++.++|
T Consensus 176 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 203 (277)
T cd05062 176 ----------------------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSD 203 (277)
T ss_pred ----------------------------------------------------ecCCCCccCHhhcChhHhhcCCcCchhH
Confidence 0000124577899999999888999999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||||++|||++ ||...... .....+.....++......+...+|+.+||+.+|++|||+.|++++
T Consensus 204 i~slG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 204 VWSFGVVLWEIATLAEQPYQGMSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999997 55544332 3333333333332222223345699999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=270.35 Aligned_cols=210 Identities=17% Similarity=0.207 Sum_probs=159.2
Q ss_pred hhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+++.++||||+++++.+.... .....+++|+||.|++|.+++... .+++..++.++.||+.||.|||+.||
T Consensus 62 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~gi 139 (343)
T cd07851 62 YRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSAGI 139 (343)
T ss_pred HHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 36788999999999999998443322 223358999999888999998542 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......
T Consensus 140 ~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------------------------------------ 171 (343)
T cd07851 140 IHRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------------------------------------ 171 (343)
T ss_pred ecCCCCHHHeEECCCCCEEEcccccccccccc------------------------------------------------
Confidence 99999999999999999999999887332100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
.....++..|+|||.+.+. .++.++|||||||++
T Consensus 172 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l 206 (343)
T cd07851 172 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 206 (343)
T ss_pred ---------------------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHH
Confidence 0013568899999998654 478999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCc----------------------------cccccCchHHHHHHHcCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPP----------------------------QLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~----------------------------~~~~~~p~~~~Li~~~L~~d 348 (720)
|||++ ||........ ...+.. +..++ ......+...+|+.+||..+
T Consensus 207 ~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~ 285 (343)
T cd07851 207 AELLTGKTLFPGSDHIDQ-LKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLD 285 (343)
T ss_pred HHHHhCCCCCCCCChHHH-HHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCC
Confidence 99999 5654433221 111111 00010 01112344559999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004989 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|.+|||+.+|++||||......
T Consensus 286 P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 286 PDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred hhhCCCHHHHhcCCCccccCCC
Confidence 9999999999999999987544
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=269.17 Aligned_cols=205 Identities=18% Similarity=0.217 Sum_probs=154.8
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------------------
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------------------- 115 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------------------- 115 (720)
..|..++.++ +||||+++++.+...+ ..++++||| .+++|.++|....
T Consensus 58 ~~E~~~~~~l~~h~niv~~~~~~~~~~---~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (337)
T cd05054 58 MTELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLD 134 (337)
T ss_pred HHHHHHHHhhccCcchhheeeeEecCC---CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccc
Confidence 3677788888 8999999999443332 257899999 9999999984311
Q ss_pred ---------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEE
Q 004989 116 ---------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSF 162 (720)
Q Consensus 116 ---------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkl 162 (720)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL 214 (337)
T cd05054 135 SVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKI 214 (337)
T ss_pred cCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEE
Confidence 25789999999999999999999999999999999999999999999
Q ss_pred eecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccc
Q 004989 163 IESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGM 242 (720)
Q Consensus 163 iDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~ 242 (720)
+|||++........ .
T Consensus 215 ~DfG~a~~~~~~~~--------------------------------~--------------------------------- 229 (337)
T cd05054 215 CDFGLARDIYKDPD--------------------------------Y--------------------------------- 229 (337)
T ss_pred eccccchhcccCcc--------------------------------h---------------------------------
Confidence 99998743211000 0
Q ss_pred ccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHH
Q 004989 243 QEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTM 318 (720)
Q Consensus 243 ~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~ 318 (720)
.......++..|+|||++.+..++.++|||||||++|||++ ||..........
T Consensus 230 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~ 286 (337)
T cd05054 230 -----------------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFC 286 (337)
T ss_pred -----------------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHH
Confidence 00001245678999999999999999999999999999996 555433332333
Q ss_pred HHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 319 SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 319 ~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..+.....+.......+...+++.+||+.+|++||++.|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~ 328 (337)
T cd05054 287 RRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVE 328 (337)
T ss_pred HHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 344433333222233455679999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=262.60 Aligned_cols=210 Identities=17% Similarity=0.156 Sum_probs=155.4
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+...|..++.++. ||||+++++. +..+. ..+++|||.+++|.++.. .....+++..+..++.|++.||+||
T Consensus 48 ~~~~e~~~l~~~~~~~~iv~~~~~-~~~~~---~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~l 123 (288)
T cd06616 48 RLLMDLDVVMRSSDCPYIVKFYGA-LFREG---DCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYL 123 (288)
T ss_pred HHHHHHHHHHHhcCCCCEeeeeeE-EecCC---cEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3446777788886 9999999994 43332 578999997777766441 2335599999999999999999999
Q ss_pred HHC-CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 138 HSQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 138 Hs~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
|+. ||+||||||+||+++.++.++|+|||++.......
T Consensus 124 h~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------- 162 (288)
T cd06616 124 KEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----------------------------------------- 162 (288)
T ss_pred hhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC-----------------------------------------
Confidence 984 99999999999999999999999998873221100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC---CCCcccc
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASD 293 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sD 293 (720)
......|++.|+|||++.+. .++.++|
T Consensus 163 --------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~D 192 (288)
T cd06616 163 --------------------------------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSD 192 (288)
T ss_pred --------------------------------------------------ccccccCccCccCHHHhccccccCCcchhh
Confidence 00012568889999999776 5899999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCc---ccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||||||++|||++ ||.........+..+.....+. ... ...+...+|+.+||+++|++|||+++++.||||..
T Consensus 193 i~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 193 VWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred hhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 9999999999998 5554433222223222222211 111 12334569999999999999999999999999987
Q ss_pred C
Q 004989 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 273 ~ 273 (288)
T cd06616 273 Y 273 (288)
T ss_pred h
Confidence 5
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=256.13 Aligned_cols=202 Identities=17% Similarity=0.205 Sum_probs=154.7
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... ..|++||| .|++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 47 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 122 (256)
T cd05059 47 IEEAKVMMKLSHPNLVQLYG-VCTKQR---PIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFI 122 (256)
T ss_pred HHHHHHHHhCCCCCEEEEEE-EEcCCC---ceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777899999999999999 444433 57999999 89999999965545689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.........
T Consensus 123 H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------------- 156 (256)
T cd05059 123 HRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT---------------------------------------------- 156 (256)
T ss_pred cccccHhhEEECCCCcEEECCcccceeccccccc----------------------------------------------
Confidence 9999999999999999999998877432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~ 193 (256)
T cd05059 157 -------------------------------------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWE 193 (256)
T ss_pred -------------------------------------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 0000123557999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....++......+...+++.+||+.+|++|||+.++++
T Consensus 194 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~ 253 (256)
T cd05059 194 VFSEGKMPYERFSNS-EVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS 253 (256)
T ss_pred HhccCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 997 55443332 333444433222222223344559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-29 Score=256.90 Aligned_cols=199 Identities=15% Similarity=0.145 Sum_probs=152.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++++++||||+++++.++..+. .++++||| .+++|.+++.+.. ..+++..++.++.||+.||.|||++|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (256)
T cd05082 46 FLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN 122 (256)
T ss_pred HHHHHHHHHhCCCCCeeeEEEEEEcCCC---ceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3467779999999999999994444332 57999999 8899999995433 34889999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+|++|||.+...... .
T Consensus 123 i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~---------------------------------~------------- 156 (256)
T cd05082 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---------------------------------Q------------- 156 (256)
T ss_pred EeccccchheEEEcCCCcEEecCCccceecccc---------------------------------C-------------
Confidence 999999999999999999999999877321000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
....++..|+|||++.+..++.++|||||||++
T Consensus 157 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~ 189 (256)
T cd05082 157 -----------------------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 189 (256)
T ss_pred -----------------------------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHH
Confidence 001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ......+.... ++...... +...+|+.+||+.+|++|||+.++++
T Consensus 190 ~~l~~~g~~p~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 190 WEIYSFGRVPYPRIPL-KDVVPRVEKGY-KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHhCCCCCCCCCCH-HHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99996 5544322 23333333332 22223333 44459999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=266.16 Aligned_cols=204 Identities=15% Similarity=0.122 Sum_probs=156.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..+++.++||||+++++ ++... ..++++|| .+++|.+++......+++..++.++.||+.||+|||++|
T Consensus 55 ~~~~e~~~l~~l~h~niv~~~g-~~~~~----~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 129 (316)
T cd05108 55 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR 129 (316)
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEcCC----CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 3446778999999999999999 44333 25788998 999999999766556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......... +
T Consensus 130 iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~----------- 166 (316)
T cd05108 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE--------------------------------Y----------- 166 (316)
T ss_pred eeccccchhheEecCCCcEEEccccccccccCCCcc--------------------------------e-----------
Confidence 999999999999999999999999988443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 167 ---------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l 201 (316)
T cd05108 167 ---------------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 201 (316)
T ss_pred ---------------------------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHH
Confidence 00001336679999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ......+.....++..........+++.+||..+|.+||++.+++.
T Consensus 202 ~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~ 263 (316)
T cd05108 202 WELMTFGSKPYDGIPA-SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 263 (316)
T ss_pred HHHHcCCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99986 5544322 2333333333333333333455669999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=270.09 Aligned_cols=212 Identities=16% Similarity=0.236 Sum_probs=159.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...++++|||.|++|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 60 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~ 136 (343)
T cd07880 60 RAYRELRLLKHMKHENVIGLLD-VFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHA 136 (343)
T ss_pred HHHHHHHHHHhcCCCCccceee-eecCCccccccceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3447888999999999999999 4444332 234799999988899998854 348999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||+||||||+||+++.++.++++|||.+......
T Consensus 137 ~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--------------------------------------------- 171 (343)
T cd07880 137 AGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE--------------------------------------------- 171 (343)
T ss_pred CCeecCCCCHHHEEEcCCCCEEEeecccccccccC---------------------------------------------
Confidence 99999999999999999999999999887321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLG 298 (720)
.....+++.|+|||.+.+. .++.++||||||
T Consensus 172 ------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 203 (343)
T cd07880 172 ------------------------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVG 203 (343)
T ss_pred ------------------------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHH
Confidence 0013568899999998763 488999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCC-------------------------Ccc---c-cccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVL-------------------------PPQ---L-LLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~-------------------------p~~---~-~~~~p~~~~Li~~~L~ 346 (720)
|++|+|++ ||............+..... +.. + ....+...++|.+||+
T Consensus 204 ~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 283 (343)
T cd07880 204 CIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLV 283 (343)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcC
Confidence 99999999 56544332222211110000 000 1 1122345599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.||.+|||+.+++.||||......
T Consensus 284 ~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 284 LDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred CChhhCCCHHHHhcCccHhhhcCc
Confidence 999999999999999999987443
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=261.56 Aligned_cols=202 Identities=13% Similarity=0.106 Sum_probs=152.5
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++.+.. ..+++..++.
T Consensus 48 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 123 (297)
T cd05089 48 DFAGELEVLCKLGHHPNIINLLG-ACENRG---YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQ 123 (297)
T ss_pred HHHHHHHHHHhhcCCCchhheEE-EEccCC---cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHH
Confidence 344677788888 7999999999 444433 47999999 8899999994421 2488999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 124 i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~------------------------------- 172 (297)
T cd05089 124 FASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY------------------------------- 172 (297)
T ss_pred HHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce-------------------------------
Confidence 9999999999999999999999999999999999999998876311000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+ . ......+..|+|||.+.+
T Consensus 173 ----~--~------------------------------------------------------~~~~~~~~~y~aPE~~~~ 192 (297)
T cd05089 173 ----V--K------------------------------------------------------KTMGRLPVRWMAIESLNY 192 (297)
T ss_pred ----e--c------------------------------------------------------cCCCCcCccccCchhhcc
Confidence 0 0 000112456999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||..+|.+||+++++++
T Consensus 193 ~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 193 SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 889999999999999999996 66554433 333344433332222223345569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=261.19 Aligned_cols=203 Identities=18% Similarity=0.201 Sum_probs=155.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 128 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~ 128 (720)
.+|..++++++||||+++++ ++.... ..++|||| .+++|.+++.... ..+++..++.++.
T Consensus 55 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 130 (291)
T cd05094 55 QREAELLTNLQHEHIVKFYG-VCGDGD---PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 130 (291)
T ss_pred HHHHHHHhcCCCCCcceEEE-EEccCC---ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHH
Confidence 36777899999999999999 554443 57999999 8999999995422 2378999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 131 ~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~-------------------------------- 178 (291)
T cd05094 131 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY-------------------------------- 178 (291)
T ss_pred HHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCce--------------------------------
Confidence 999999999999999999999999999999999999988743211100
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
. .......++..|+|||.+.+..+
T Consensus 179 -~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 202 (291)
T cd05094 179 -Y-------------------------------------------------------RVGGHTMLPIRWMPPESIMYRKF 202 (291)
T ss_pred -e-------------------------------------------------------ecCCCCCcceeecChHHhccCCC
Confidence 0 00001346788999999998889
Q ss_pred Cccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++|||||||++|||++ ||...... .....+.....+.......+...+|+.+||+.+|++||++.++++
T Consensus 203 ~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 203 TTESDVWSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 999999999999999997 44433332 334444444333322222344569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=261.45 Aligned_cols=207 Identities=17% Similarity=0.217 Sum_probs=159.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++.... .+|+|||| .+++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 48 DIQQEITVLSQCDSPYITRYYG-SYLKGT---KLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred HHHHHHHHHHcCCCCccHhhhc-ccccCC---ceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 4457888999999999999999 444433 57999999 88999998854 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++++|||++....... .
T Consensus 122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~----------------------------------~----------- 156 (277)
T cd06642 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----------------------------------I----------- 156 (277)
T ss_pred eeccCCChheEEEeCCCCEEEccccccccccCcc----------------------------------h-----------
Confidence 9999999999999999999999988773221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|||||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06642 157 ---------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITA 191 (277)
T ss_pred ---------------------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred hhccccCCC---CchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFCPFST---GEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLltpf~~---~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||+++..+ .... .....+... .++.+....+ ...+|+.+||+.+|.+||++.++++||||...
T Consensus 192 ~el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 192 IELAKGEPPNSDLHPM-RVLFLIPKN-SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHhCCCCCcccchh-hHHhhhhcC-CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 999994333 2221 112222222 2333333333 34599999999999999999999999998764
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-29 Score=262.32 Aligned_cols=210 Identities=16% Similarity=0.225 Sum_probs=157.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
..|..++.+++||||+++++ ++.+. ...++||||.+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 50 ~~e~~~l~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H 125 (298)
T cd07841 50 LREIKLLQELKHPNIIGLLD-VFGHK---SNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILH 125 (298)
T ss_pred HHHHHHHhhcCCCCChhhhh-eeecC---CEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 36777899999999999999 55443 267999999888999999655446999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+...+....
T Consensus 126 ~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 157 (298)
T cd07841 126 RDLKPNNLLIASDGVLKLADFGLARSFGSPNR------------------------------------------------ 157 (298)
T ss_pred cCCChhhEEEcCCCCEEEccceeeeeccCCCc------------------------------------------------
Confidence 99999999999999999999888743321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+. .++.++|||||||++||
T Consensus 158 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e 195 (298)
T cd07841 158 ------------------------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAE 195 (298)
T ss_pred ------------------------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 00012457889999998654 47899999999999999
Q ss_pred cccc---CCCCchHHHHHHHhhcCC-C---------------------Ccc-----ccccCchHHHHHHHcCCCCCCCCC
Q 004989 304 LFCP---FSTGEEKTRTMSSLRHRV-L---------------------PPQ-----LLLKFPKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 304 Lltp---f~~~~~~~~~~~~l~~~~-~---------------------p~~-----~~~~~p~~~~Li~~~L~~dP~~Rp 353 (720)
|+++ |...... .....+.... . ++. +........+||.+||.++|++||
T Consensus 196 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 274 (298)
T cd07841 196 LLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRI 274 (298)
T ss_pred HHcCCccccCCccH-HHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCc
Confidence 9993 3322221 1111111000 0 000 011123445899999999999999
Q ss_pred ChHHHHcCcccCCCcc
Q 004989 354 KMGELLQSEFLNEPRD 369 (720)
Q Consensus 354 ta~eiL~hp~~~~~~~ 369 (720)
|+.|+|.||||.+...
T Consensus 275 s~~e~l~~~~~~~~~~ 290 (298)
T cd07841 275 TARQALEHPYFSNDPA 290 (298)
T ss_pred CHHHHhhCccccCCCC
Confidence 9999999999998643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=257.21 Aligned_cols=205 Identities=20% Similarity=0.261 Sum_probs=159.2
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+...|..+|++++||||+++++ ++.... ..+++||| .+++|.+++. .....+++..++.++.||+.||.||
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L 122 (267)
T cd08228 47 QDCVKEIDLLKQLNHPNVIKYLD-SFIEDN---ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM 122 (267)
T ss_pred HHHHHHHHHHHhCCCcceeeeee-eEEECC---eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 34457888999999999999999 444432 57999999 8899999883 2334589999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+|+||||+||+++.++.++++|||.+........
T Consensus 123 H~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~----------------------------------------- 161 (267)
T cd08228 123 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT----------------------------------------- 161 (267)
T ss_pred hhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH-----------------------------------------
Confidence 999999999999999999999999999887733211000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......|++.|+|||.+.+..++.++|||||
T Consensus 162 -------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~sl 192 (267)
T cd08228 162 -------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSL 192 (267)
T ss_pred -------------------------------------------------HHhcCCCCccccChhhhccCCCCchhhHHHH
Confidence 0001357889999999988889999999999
Q ss_pred hchhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 298 GVLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||.... ........+.....++......+ ...+|+.+||..+|++||++.++++
T Consensus 193 G~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 193 GCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 999999999 554432 22334444444445554433343 4569999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=253.89 Aligned_cols=206 Identities=20% Similarity=0.240 Sum_probs=159.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--------CCCCCHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------~~~l~~~~~~~i~~QIl~a 133 (720)
+..+|..++..++||||+++++ ++... ..++++||| .+++|.+++... ...+++..++.++.||+.|
T Consensus 42 ~~~~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 117 (262)
T cd00192 42 DFLKEARVMKKLGHPNVVRLLG-VCTEE---EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117 (262)
T ss_pred HHHHHHHHHhhcCCCChheeee-eecCC---CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHH
Confidence 3346777899999999999999 55443 368999999 799999999654 3569999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+|+||||+||+++.++.++|+|||.+....... .+
T Consensus 118 l~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~--- 161 (262)
T cd00192 118 MEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD---------------------------------YY--- 161 (262)
T ss_pred HHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc---------------------------------cc---
Confidence 999999999999999999999999999999998874432110 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+++.|+|||.+.+..++.++|
T Consensus 162 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 189 (262)
T cd00192 162 ----------------------------------------------------RKKTGGKLPIRWMAPESLKDGIFTSKSD 189 (262)
T ss_pred ----------------------------------------------------ccccCCCcCccccCHHHhccCCcchhhc
Confidence 0000134688899999998888999999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||||++|||++ ||..... ......+......+......+...+++.+||..+|.+|||+.+++++
T Consensus 190 i~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 190 VWSFGVLLWEIFTLGATPYPGLSN-EEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred cHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 9999999999997 4554432 23444444333332222334556699999999999999999999864
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-29 Score=260.24 Aligned_cols=202 Identities=17% Similarity=0.212 Sum_probs=154.3
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++...+||||+++++ .+.... .+|+|||| .|++|.+++.+.+ .+++..++.++.|++.||.|||+.||+||||
T Consensus 49 ~~~~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di 123 (278)
T cd05606 49 SLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNRFVVYRDL 123 (278)
T ss_pred HHHHhCCCCcEeeeee-eeecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCC
Confidence 3556678999999998 554443 57999999 8999999995543 5999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.++|+|||.+......
T Consensus 124 ~p~nili~~~~~~kl~dfg~~~~~~~~----------------------------------------------------- 150 (278)
T cd05606 124 KPANILLDEHGHVRISDLGLACDFSKK----------------------------------------------------- 150 (278)
T ss_pred CHHHEEECCCCCEEEccCcCccccCcc-----------------------------------------------------
Confidence 999999999999999999887322100
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhhhccc
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~eLlt 306 (720)
......|+..|+|||.+.+. .++.++||||+||++|||++
T Consensus 151 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~ 191 (278)
T cd05606 151 ---------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 191 (278)
T ss_pred ---------------------------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHh
Confidence 00013578999999999754 58999999999999999999
Q ss_pred ---cCCCCchH-HHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004989 307 ---PFSTGEEK-TRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 307 ---pf~~~~~~-~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
||...... .......... .++.++.. .+...+++.+||..+|.+|| ++.++++||||....
T Consensus 192 g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 192 GHSPFRQHKTKDKHEIDRMTLT-MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCCCCCCccchHHHHHHhhc-cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 56543111 1111111111 12222222 34556999999999999999 999999999998863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-29 Score=256.59 Aligned_cols=195 Identities=17% Similarity=0.150 Sum_probs=146.9
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
..+....||||+++++ ++... ..+|++||| .|++|.+++.+.. .+++..+..++.||+.||.|||++||+||||
T Consensus 37 ~~~~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl 111 (237)
T cd05576 37 LTIIPHCVPNMVCLHK-YIVSE---DSVFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDL 111 (237)
T ss_pred HHHHhcCCCceeehhh-heecC---CeEEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence 3444567999999999 44433 268999999 8999999995543 4999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.++++|||.+...+...
T Consensus 112 kp~Nil~~~~~~~~l~df~~~~~~~~~~---------------------------------------------------- 139 (237)
T cd05576 112 NPNNILLDDRGHIQLTYFSRWSEVEDSC---------------------------------------------------- 139 (237)
T ss_pred CHHHEEEcCCCCEEEecccchhcccccc----------------------------------------------------
Confidence 9999999999999999988663211000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhcccc
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
....++..|+|||.+.+..++.++||||+||++|||+++
T Consensus 140 -----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g 178 (237)
T cd05576 140 -----------------------------------------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTG 178 (237)
T ss_pred -----------------------------------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHC
Confidence 002346779999999888899999999999999999995
Q ss_pred CCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCccc
Q 004989 308 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFL 364 (720)
Q Consensus 308 f~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~ 364 (720)
..................+|+. ..+...+||.+||+.||++||++ ++++.||||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 179 KTLVECHPSGINTHTTLNIPEW---VSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cchhhcCchhcccccccCCccc---CCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 4322111000000000111211 23455699999999999999986 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-29 Score=267.18 Aligned_cols=220 Identities=15% Similarity=0.140 Sum_probs=159.4
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.++ +||||+++++...........+|++|||.+++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 48 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~gi 126 (332)
T cd07857 48 ALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANV 126 (332)
T ss_pred HHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 34677788888 5999999998443333334468999999778999999543 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......... ..
T Consensus 127 vH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~------------ 163 (332)
T cd07857 127 LHRDLKPGNLLVNADCELKICDFGLARGFSENPGE-------------------------------NA------------ 163 (332)
T ss_pred ccCCCCHHHeEEcCCCCEEeCcCCCceeccccccc-------------------------------cc------------
Confidence 99999999999999999999999988443111000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||.+.+ ..++.++|||||||++
T Consensus 164 -------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l 200 (332)
T cd07857 164 -------------------------------------------GFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCIL 200 (332)
T ss_pred -------------------------------------------ccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHH
Confidence 00011468999999998866 4589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh-----------------------c--CCCCc----cccccCchHHHHHHHcCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLR-----------------------H--RVLPP----QLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~-----------------------~--~~~p~----~~~~~~p~~~~Li~~~L~~dP 349 (720)
|+|++ ||............+. . ..... ......+...+|+.+||++||
T Consensus 201 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 280 (332)
T cd07857 201 AELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDP 280 (332)
T ss_pred HHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCc
Confidence 99998 4543322111000000 0 00001 111123455699999999999
Q ss_pred CCCCChHHHHcCcccCCCccc
Q 004989 350 SGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+|||+.+++.||||....++
T Consensus 281 ~~R~t~~~ll~~~~~~~~~~~ 301 (332)
T cd07857 281 TKRISVEEALEHPYLAIWHDP 301 (332)
T ss_pred ccCCCHHHHhcChhhhhhcCc
Confidence 999999999999999866443
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=257.22 Aligned_cols=202 Identities=17% Similarity=0.215 Sum_probs=148.7
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ ++..+. ..+++||| .+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 47 ~~e~~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii 122 (258)
T cd05078 47 FEAASMMSQLSHKHLVLNYG-VCVCGD---ESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLT 122 (258)
T ss_pred HHHHHHHHhCCCCChhheee-EEEeCC---CcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35677889999999999999 444433 46899999 89999999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++..++.+++.. +++|||++.....
T Consensus 123 H~dlkp~nili~~~~~~~~~~~~~~-------------------------------------~l~d~g~~~~~~~----- 160 (258)
T cd05078 123 HGNVCAKNVLLIREEDRKTGNPPFI-------------------------------------KLSDPGISITVLP----- 160 (258)
T ss_pred cCCCccceEEEecccccccCCCceE-------------------------------------EecccccccccCC-----
Confidence 9999999999998776544332221 2345544321110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
.....+++.|+|||++.+. .++.++|||||||++|
T Consensus 161 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~ 196 (258)
T cd05078 161 --------------------------------------------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLW 196 (258)
T ss_pred --------------------------------------------chhccccCCccCchhccCCCCCCchhhHHHHHHHHH
Confidence 0013567889999999874 4799999999999999
Q ss_pred hcccc----CCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFCP----FSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLltp----f~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||+++ |...... ........ ..+|+ ..+++..+|+.+||+.||++|||+++|++
T Consensus 197 ~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 197 EIFSGGDKPLSALDSQ-KKLQFYEDRHQLPA---PKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred HHHcCCCCChhhccHH-HHHHHHHccccCCC---CCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99993 2222221 11211111 12222 34466779999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=259.55 Aligned_cols=206 Identities=22% Similarity=0.230 Sum_probs=157.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------------CCCCCHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------------KRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----------------~~~l~~~~~~~ 125 (720)
+..+|..++++++||||+++++ ++..+. ..|++||| .+++|.+++... ...+++..+..
T Consensus 53 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (283)
T cd05090 53 EFQQEASLMAELHHPNIVCLLG-VVTQEQ---PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLH 128 (283)
T ss_pred HHHHHHHHHhhCCCCCeeeEEE-EEecCC---ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHH
Confidence 3446788999999999999999 444443 57999999 889999998422 12478899999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 129 i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~------------------------------- 177 (283)
T cd05090 129 IAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSA------------------------------- 177 (283)
T ss_pred HHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCC-------------------------------
Confidence 9999999999999999999999999999999999999999887432111
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
++.. ......++..|+|||.+.+
T Consensus 178 ---~~~~------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 200 (283)
T cd05090 178 ---DYYR------------------------------------------------------VQPKSLLPIRWMPPEAIMY 200 (283)
T ss_pred ---ccee------------------------------------------------------cccCCCccceecChHHhcc
Confidence 0000 0001235678999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||..... ...+..+.....++......+...+++.+||+.||.+||++.+|+++
T Consensus 201 ~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 201 GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 889999999999999999997 5655433 24445555444443333334555699999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=258.68 Aligned_cols=209 Identities=17% Similarity=0.143 Sum_probs=154.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|+++.||||+++++ ++... ....++++||| .|++|.+++.+....+++..+..++.||+.||.|||++|
T Consensus 52 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g 129 (284)
T cd05079 52 DLKKEIEILRNLYHENIVKYKG-ICTED-GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ 129 (284)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-EEecC-CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4557888999999999999999 44433 12357999999 899999999655456899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........ .
T Consensus 130 i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~----------- 165 (284)
T cd05079 130 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE---------------------------------Y----------- 165 (284)
T ss_pred eeecccchheEEEcCCCCEEECCCccccccccCcc---------------------------------c-----------
Confidence 99999999999999999999999888743211100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. . ......++..|+|||.+.+..++.++|||||||++
T Consensus 166 -~----------------------~--------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 202 (284)
T cd05079 166 -Y----------------------T--------------------VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTL 202 (284)
T ss_pred -e----------------------e--------------------ecCCCCCCccccCHHHhccCCCCccccchhhhhhh
Confidence 0 0 00012457789999999888899999999999999
Q ss_pred hhccccCCCC-----------------chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFCPFSTG-----------------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~-----------------~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+. .........+......+......+...+|+.+||+.+|.+|||+.++++
T Consensus 203 ~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 203 YELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred hhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999821111 0011111222222222222233455669999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=258.84 Aligned_cols=205 Identities=17% Similarity=0.232 Sum_probs=153.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ .+.... .++++||| .+++|..++... ..+++..++.++.||+.||.|||++||+
T Consensus 48 ~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~ 122 (286)
T cd07847 48 LREIRMLKQLKHPNLVNLIE-VFRRKR---KLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCI 122 (286)
T ss_pred HHHHHHHHhCCCCCEeeeee-EEeeCC---EEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 36777999999999999999 554443 57999999 777777766443 3599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........
T Consensus 123 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 155 (286)
T cd07847 123 HRDVKPENILITKQGQIKLCDFGFARILTGPGD----------------------------------------------- 155 (286)
T ss_pred ecCCChhhEEEcCCCcEEECccccceecCCCcc-----------------------------------------------
Confidence 999999999999999999999888733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......++.+|+|||.+.+. .++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~ 192 (286)
T cd07847 156 -------------------------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFA 192 (286)
T ss_pred -------------------------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHH
Confidence 00013468899999998764 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh--cC------------------CCCc-c--------ccccCchHHHHHHHcCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLR--HR------------------VLPP-Q--------LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~--~~------------------~~p~-~--------~~~~~p~~~~Li~~~L~~dP~ 350 (720)
||++ ||.............. .. ..|. . +....+...+|+.+||+++|+
T Consensus 193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 272 (286)
T cd07847 193 ELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPT 272 (286)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCcc
Confidence 9999 5654433322221110 00 0000 0 111223345999999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+||++.|++.||||
T Consensus 273 ~Rp~~~eil~~~~f 286 (286)
T cd07847 273 ERLSCEELLEHPYF 286 (286)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=258.41 Aligned_cols=204 Identities=17% Similarity=0.167 Sum_probs=156.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-------------CCCCHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------RSVDVYECLHIFRQ 129 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------~~l~~~~~~~i~~Q 129 (720)
..+|..+|..++||||+++++ ++... ...+++||| .+++|.++|...+ ..+++..+..++.|
T Consensus 55 ~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 130 (280)
T cd05049 55 FEREAELLTNFQHENIVKFYG-VCTEG---DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ 130 (280)
T ss_pred HHHHHHHHHhcCCCCchheee-EEecC---CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHH
Confidence 346777899999999999999 44444 367999999 9999999995432 34788999999999
Q ss_pred HHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccc
Q 004989 130 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 130 Il~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
|+.||.|||++|++||||||+||+++.++.++|+|||.+....... .
T Consensus 131 i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~---------------------------------~ 177 (280)
T cd05049 131 IASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTD---------------------------------Y 177 (280)
T ss_pred HHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCc---------------------------------c
Confidence 9999999999999999999999999999999999998874321110 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCC
Q 004989 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s 289 (720)
+. ......+++.|+|||++.+..++
T Consensus 178 ~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 202 (280)
T cd05049 178 YR-------------------------------------------------------VGGHTMLPIRWMPPESIMYRKFT 202 (280)
T ss_pred ee-------------------------------------------------------cCCCCcccceecChhhhccCCcc
Confidence 00 00012457889999999998899
Q ss_pred ccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||..||.+||++.|+++
T Consensus 203 ~~~Di~slG~il~e~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 203 TESDVWSFGVVLWEIFTYGKQPWYGLSNE-EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred hhhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999999999997 55443332 344444444443332233345569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=260.01 Aligned_cols=206 Identities=17% Similarity=0.186 Sum_probs=157.2
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---------------CCCCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---------------PKRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---------------~~~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... .++++||| .+++|.+++.. ....+++..++.
T Consensus 61 ~~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 136 (293)
T cd05053 61 DLVSEMEMMKMIGKHKNIINLLG-VCTQEG---PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVS 136 (293)
T ss_pred HHHHHHHHHHhhcCCCCeeeEEE-EEcCCC---CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHH
Confidence 344677788888 8999999999 444432 57999999 89999999942 234589999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||+|||+.||+||||||+||+++.++.++|+|||.+.........
T Consensus 137 i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~---------------------------- 188 (293)
T cd05053 137 FAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY---------------------------- 188 (293)
T ss_pred HHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce----------------------------
Confidence 9999999999999999999999999999999999999999887432111000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
. ......++..|+|||++.+
T Consensus 189 ----------------------------------------~--------------------~~~~~~~~~~y~aPE~~~~ 208 (293)
T cd05053 189 ----------------------------------------R--------------------KTTNGRLPVKWMAPEALFD 208 (293)
T ss_pred ----------------------------------------e--------------------ccCCCCCCccccCHHHhcc
Confidence 0 0000123567999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||.++|.+|||+.|++++
T Consensus 209 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 209 RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-EELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred CCcCcccceeehhhHHHHHhcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 889999999999999999987 5554433 23444444444333333344556699999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=255.66 Aligned_cols=199 Identities=16% Similarity=0.246 Sum_probs=155.5
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.+....+||||+++++ .+.... .+|++||| .|++|.+++.... .+++..+..++.||+.||.|||+.||+|+||
T Consensus 49 ~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl 123 (260)
T cd05611 49 IMMIQGESPYVAKLYY-SFQSKD---YLYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDI 123 (260)
T ss_pred HHhhcCCCCCeeeeee-eEEcCC---eEEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 3455679999999999 454433 67999999 8999999995543 4899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
+|+||+++.++.++|+|||.+......
T Consensus 124 ~p~nil~~~~~~~~l~dfg~~~~~~~~----------------------------------------------------- 150 (260)
T cd05611 124 KPENLLIDQTGHLKLTDFGLSRNGLEN----------------------------------------------------- 150 (260)
T ss_pred CHHHeEECCCCcEEEeecccceecccc-----------------------------------------------------
Confidence 999999999999999998876321000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
....|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 151 -----------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g 189 (260)
T cd05611 151 -----------------------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFG 189 (260)
T ss_pred -----------------------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHC
Confidence 01356888999999988888999999999999999998
Q ss_pred --cCCCCchHHHHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCCh---HHHHcCcccCCC
Q 004989 307 --PFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~--~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta---~eiL~hp~~~~~ 367 (720)
||...... .....+... ..++...... +...+||.+||+.+|++||++ .|+|.||||...
T Consensus 190 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 190 YPPFHAETPD-AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred CCCCCCCCHH-HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 66554433 233333222 2233333233 445699999999999999954 799999999765
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-29 Score=258.57 Aligned_cols=203 Identities=16% Similarity=0.219 Sum_probs=153.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ .+.... .+|+|||| .+++|.+++... ..+++..+..++.||+.||.|||+.||+
T Consensus 54 ~~e~~~l~~~~h~~ii~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 128 (267)
T cd06646 54 QQEIFMVKECKHCNIVAYFG-SYLSRE---KLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKM 128 (267)
T ss_pred HHHHHHHHhcCCCCeeeeeE-EEEeCC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36778999999999999999 444432 57999999 889999998544 3589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........
T Consensus 129 H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 161 (267)
T cd06646 129 HRDIKGANILLTDNGDVKLADFGVAAKITATIA----------------------------------------------- 161 (267)
T ss_pred ccCCCHHHEEECCCCCEEECcCccceeeccccc-----------------------------------------------
Confidence 999999999999999999999988733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccccchhhhch
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.+ ..++.++|||||||+
T Consensus 162 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~i 198 (267)
T cd06646 162 -------------------------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGIT 198 (267)
T ss_pred -------------------------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHH
Confidence 0001357889999999853 337889999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCC-CCccc--cccC-chHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRV-LPPQL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~--~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+|||++ ||........ ...+.... .++.+ ...+ +...+|+.+||..+|++|||++++|+|+|
T Consensus 199 l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 199 AIELAELQPPMFDLHPMRA-LFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHhCCCCccccchhhh-heeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 999999 4433222211 11111111 22222 1223 34459999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=255.76 Aligned_cols=200 Identities=19% Similarity=0.208 Sum_probs=153.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|..++||||+++++ ++..+. .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||++|++
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~ 126 (263)
T cd05052 51 KEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 126 (263)
T ss_pred HHHHHHHhCCCCChhheEE-EEcCCC---CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 5777899999999999999 444433 57999999 89999999944 334589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.........
T Consensus 127 H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~---------------------------------------------- 160 (263)
T cd05052 127 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------- 160 (263)
T ss_pred ecccCcceEEEcCCCcEEeCCCccccccccceee----------------------------------------------
Confidence 9999999999999999999998887432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 161 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 197 (263)
T cd05052 161 -------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 197 (263)
T ss_pred -------------------------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHH
Confidence 0000123567999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||..... ......+..... +...... +...+|+.+||..+|++||++.++++
T Consensus 198 l~t~g~~p~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 198 IATYGMSPYPGIDL-SQVYELLEKGYR-MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHcCCCCCCCCCCH-HHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 997 5554332 233444443322 2223333 44559999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=259.86 Aligned_cols=211 Identities=16% Similarity=0.205 Sum_probs=153.7
Q ss_pred hhhhhhcccCC-CCCceecccceeecCC-CCCcEEEEEecCCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGD-HLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 65 ~~e~~~L~~l~-HpnIV~l~~~~~~~~~-~~~~~~lv~E~~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+|..+++.+. ||||+++++.+..... ....+|++|||..++|.+++... ...+++..++.++.||+.||.|||
T Consensus 48 ~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH 127 (295)
T cd07837 48 LREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH 127 (295)
T ss_pred HHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 35777888885 6999999994443332 23347999999666899988432 235899999999999999999999
Q ss_pred HCCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+||+++. ++.++|+|||.+....... .
T Consensus 128 ~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~--------------------------------~--------- 166 (295)
T cd07837 128 KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV--------------------------------K--------- 166 (295)
T ss_pred HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc--------------------------------c---------
Confidence 999999999999999998 8899999998874321110 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
......++++|+|||.+.+. .++.++||||
T Consensus 167 -------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s 197 (295)
T cd07837 167 -------------------------------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWS 197 (295)
T ss_pred -------------------------------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHH
Confidence 00012458899999998764 4799999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCC------------------C---Ccc----c-cccCchHHHHHHHcCCC
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV------------------L---PPQ----L-LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~------------------~---p~~----~-~~~~p~~~~Li~~~L~~ 347 (720)
|||++|+|++ ||................. . .+. . ....+...+||.+||.+
T Consensus 198 lG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 277 (295)
T cd07837 198 VGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRY 277 (295)
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccC
Confidence 9999999999 5655443322222111100 0 000 0 11223445999999999
Q ss_pred CCCCCCChHHHHcCcccC
Q 004989 348 EPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~ 365 (720)
||.+||++.|+|.||||+
T Consensus 278 ~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 278 DPAKRISAKAALTHPYFD 295 (295)
T ss_pred ChhhcCCHHHHhcCCCcC
Confidence 999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=255.92 Aligned_cols=210 Identities=22% Similarity=0.233 Sum_probs=165.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+...|...+.+++||||+++++ ++... ...+++||| .+++|.+++... ..+++..++.++.||+.||.|||+ .
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ 119 (264)
T cd06623 45 QLLRELKTLRSCESPYVVKCYG-AFYKE---GEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKR 119 (264)
T ss_pred HHHHHHHHHHhcCCCCeeeEEE-EEccC---CeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 3447777899999999999999 44443 368999999 889999999554 459999999999999999999999 9
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||+|+||+++.++.++|+|||.+........
T Consensus 120 ~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~-------------------------------------------- 155 (264)
T cd06623 120 HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD-------------------------------------------- 155 (264)
T ss_pred CCccCCCCHHHEEECCCCCEEEccCccceecccCCC--------------------------------------------
Confidence 999999999999999999999999987733211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......++..|+|||.+.+..++.++||||||++
T Consensus 156 ----------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i 189 (264)
T cd06623 156 ----------------------------------------------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLT 189 (264)
T ss_pred ----------------------------------------------cccceeecccccCHhhhCCCCCCchhhHHHHHHH
Confidence 0001356889999999988889999999999999
Q ss_pred hhhccc---cCCCCc--hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGE--EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~--~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||.... ........+.....++.... ......+++.+||+++|+.||++.++++||||+..
T Consensus 190 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 190 LLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999 555443 33444455544444333333 23445599999999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=258.40 Aligned_cols=205 Identities=16% Similarity=0.242 Sum_probs=153.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++++++||||+++++ .+.+.. .++++|||..++|.+++.... ..+++..++.++.||+.||.|||+.||+
T Consensus 47 ~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 122 (284)
T cd07836 47 REISLMKELKHENIVRLHD-VIHTEN---KLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVL 122 (284)
T ss_pred HHHHHHHhhcCCCEeeeee-eEeeCC---cEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5777999999999999999 444443 579999996679999985433 4589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++++|||.+....... .
T Consensus 123 h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--------------------------------~--------------- 155 (284)
T cd07836 123 HRDLKPQNLLINKRGELKLADFGLARAFGIPV--------------------------------N--------------- 155 (284)
T ss_pred eCCCCHHHEEECCCCcEEEeecchhhhhcCCc--------------------------------c---------------
Confidence 99999999999999999999998873321110 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~ 192 (284)
T cd07836 156 -------------------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMA 192 (284)
T ss_pred -------------------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHH
Confidence 000135688999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-------------------CCCCcc--------ccccCchHHHHHHHcCCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH-------------------RVLPPQ--------LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-------------------~~~p~~--------~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
+|++ ||............+.. ...+.. .....+...+++.+||+.||.+|
T Consensus 193 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 272 (284)
T cd07836 193 EMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELR 272 (284)
T ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccC
Confidence 9999 55443322111111100 000000 01122344599999999999999
Q ss_pred CChHHHHcCccc
Q 004989 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
|++.++++||||
T Consensus 273 ~~~~~~l~~~~f 284 (284)
T cd07836 273 ISAHDALQHPWF 284 (284)
T ss_pred CCHHHHhcCCCC
Confidence 999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=255.33 Aligned_cols=210 Identities=16% Similarity=0.148 Sum_probs=160.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ .+.+.. ...++++||| .+++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~ei~~l~~l~h~~i~~~~~-~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~ 126 (264)
T cd06653 50 ALECEIQLLKNLRHDRIVQYYG-CLRDPE-EKKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNM 126 (264)
T ss_pred HHHHHHHHHHHcCCCCcceEEE-EEEcCC-CCEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4557888999999999999999 443332 2357899999 8999999995543 3899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+........ .+.
T Consensus 127 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-------------------------------~~~----------- 164 (264)
T cd06653 127 IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM-------------------------------SGT----------- 164 (264)
T ss_pred EecCCCCHHHEEEcCCCCEEECccccccccccccc-------------------------------cCc-----------
Confidence 99999999999999999999999988743211000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 199 (264)
T cd06653 165 ---------------------------------------------GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV 199 (264)
T ss_pred ---------------------------------------------cccccCCcccccCHhhhcCCCCCccccHHHHHHHH
Confidence 00013578899999999888889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||............ .....++.++... +...+|+.+||. +|..||++.+++.|||.
T Consensus 200 ~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 200 VEMLTEKPPWAEYEAMAAIFKI-ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHhCCCCCCccCHHHHHHHH-HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 99999 66554444333333 2222333334444 445599999999 57999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-30 Score=257.11 Aligned_cols=221 Identities=17% Similarity=0.272 Sum_probs=173.0
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|...+||.+..+-. .|+... .+|+|||| .||.|.-.|.+ .+.+++..++.+-..|+.||.|||+++||.
T Consensus 217 TE~RVL~~~~HPFLt~LKY-sFQt~d---rlCFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivY 291 (516)
T KOG0690|consen 217 TENRVLQNCRHPFLTSLKY-SFQTQD---RLCFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVY 291 (516)
T ss_pred hHHHHHHhccCcHHHHhhh-hhccCc---eEEEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeee
Confidence 5666899999999988876 454543 68999999 99999988843 456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||.+|+|++.+|++||.|||+|+.-... ++
T Consensus 292 RDlKLENLlLDkDGHIKitDFGLCKE~I~~---------------------------------g~--------------- 323 (516)
T KOG0690|consen 292 RDLKLENLLLDKDGHIKITDFGLCKEEIKY---------------------------------GD--------------- 323 (516)
T ss_pred eechhhhheeccCCceEeeecccchhcccc---------------------------------cc---------------
Confidence 999999999999999999999999532111 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
+....+|||.|+|||++....|+.++|+|.+||++|||
T Consensus 324 ------------------------------------------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEM 361 (516)
T KOG0690|consen 324 ------------------------------------------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEM 361 (516)
T ss_pred ------------------------------------------eeccccCChhhcCchhhccccccceeehhhhhHHHHHH
Confidence 01126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhh-c-CCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHH
Q 004989 305 FC---PFSTGEEKTRTMSSLR-H-RVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~-~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e 373 (720)
+| ||...+.. ..+..|. . -.+|..+ .|+...|+..+|.+||.+|. .+.||.+|+||... +...-.
T Consensus 362 mCGRLPFyn~dh~-kLFeLIl~ed~kFPr~l---s~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~ 437 (516)
T KOG0690|consen 362 MCGRLPFYNKDHE-KLFELILMEDLKFPRTL---SPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYR 437 (516)
T ss_pred HhccCcccccchh-HHHHHHHhhhccCCccC---CHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHH
Confidence 99 88775443 2222222 2 2233332 35556999999999999995 58999999999987 444555
Q ss_pred HHHHHHHhhhhh
Q 004989 374 REAAIELREQID 385 (720)
Q Consensus 374 ~~~~~~~~e~~~ 385 (720)
++..+++.+...
T Consensus 438 Kki~PPfKPqVt 449 (516)
T KOG0690|consen 438 KKIEPPFKPQVT 449 (516)
T ss_pred hccCCCCCCCcc
Confidence 555555555443
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-30 Score=255.78 Aligned_cols=210 Identities=12% Similarity=0.161 Sum_probs=166.9
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.|+.+++.|+||++|+.+|... .+|+|||| +.|++.+.++....++++.++..+++..+.||.|||...-||
T Consensus 77 KEISIMQQC~S~yVVKYYGSYFK~s----DLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIH 152 (502)
T KOG0574|consen 77 KEISIMQQCKSKYVVKYYGSYFKHS----DLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIH 152 (502)
T ss_pred HHHHHHHHcCCchhhhhhhhhccCC----ceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 7888999999999999999666544 37999999 789999999877888999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..|||++-+|+.||+|||.+-.. +|- +
T Consensus 153 RDIKAGNILLNT~G~AKLADFGVAGQL------------------------------------TDT-M------------ 183 (502)
T KOG0574|consen 153 RDIKAGNILLNTDGIAKLADFGVAGQL------------------------------------TDT-M------------ 183 (502)
T ss_pred hhcccccEEEcccchhhhhhccccchh------------------------------------hhh-H------------
Confidence 999999999999999999999988221 110 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.+....+|||.|||||++..-.|.+.+||||||++..||
T Consensus 184 -----------------------------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEM 222 (502)
T KOG0574|consen 184 -----------------------------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEM 222 (502)
T ss_pred -----------------------------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhh
Confidence 011236899999999999999999999999999999999
Q ss_pred cccCCCCchHHHHHHHhhc-CCCCccc--cccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 305 FCPFSTGEEKTRTMSSLRH-RVLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 305 ltpf~~~~~~~~~~~~l~~-~~~p~~~--~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+-++......+.....- -..||.+ +..|+... +|++.||.+.|++|.||.++++|||++....
T Consensus 223 AEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 223 AEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred hcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 9833332222111111111 1223333 23555544 9999999999999999999999999998633
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=259.20 Aligned_cols=208 Identities=18% Similarity=0.191 Sum_probs=159.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..++..++||||+++++ .+... ..+|+|||| .+++|.+++.+. ..+++..++.++.||+.||.|||+ .
T Consensus 49 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~ 123 (284)
T cd06620 49 QILRELQIMHECRSPYIVSFYG-AFLNE---NNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVH 123 (284)
T ss_pred HHHHHHHHHHHcCCCCcceEee-eEecC---CEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 3347778899999999999999 44444 368999999 899999988554 348999999999999999999997 6
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++||||||+||+++.++.++|+|||++......
T Consensus 124 ~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---------------------------------------------- 157 (284)
T cd06620 124 RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---------------------------------------------- 157 (284)
T ss_pred CeeccCCCHHHEEECCCCcEEEccCCcccchhhh----------------------------------------------
Confidence 9999999999999999999999988876221000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|+..|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~ 191 (284)
T cd06620 158 ----------------------------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGIS 191 (284)
T ss_pred ----------------------------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHH
Confidence 0001367899999999988889999999999999
Q ss_pred hhhccc---cCCCCchH----------HHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 301 LFELFC---PFSTGEEK----------TRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 301 l~eLlt---pf~~~~~~----------~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+|+|++ ||...... ......+.....+.......+ ...+|+.+||.+||.+|||+.|+++|+||..
T Consensus 192 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 192 IIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 999998 66543221 111222222211211112233 4559999999999999999999999999876
Q ss_pred C
Q 004989 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 272 ~ 272 (284)
T cd06620 272 A 272 (284)
T ss_pred c
Confidence 5
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=254.63 Aligned_cols=206 Identities=16% Similarity=0.158 Sum_probs=152.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.++||||+++++ ++.... ...+++||| .+++|.+++.+....+++..+..++.||+.||.|||+.||+
T Consensus 44 ~~e~~~l~~l~h~~iv~~~~-~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 120 (262)
T cd05058 44 LKEGIIMKDFSHPNVLSLLG-ICLPSE--GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFV 120 (262)
T ss_pred HHHHHHHccCCCCCcceEEE-EeecCC--CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 36777899999999999999 443222 246899999 89999999966555578888999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... .+...
T Consensus 121 H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~~~---------- 157 (262)
T cd05058 121 HRDLAARNCMLDESFTVKVADFGLARDIYDKE---------------------------------YYSVH---------- 157 (262)
T ss_pred ccccCcceEEEcCCCcEEECCccccccccCCc---------------------------------ceeec----------
Confidence 99999999999999999999998874321110 00000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+..++.++|||||||++||
T Consensus 158 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 194 (262)
T cd05058 158 -------------------------------------------NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 194 (262)
T ss_pred -------------------------------------------ccccCcCCccccChhHhccCccchHHHHHHHHHHHHH
Confidence 0001245678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+..+..++......+...+++.+||+++|++||++.+++.
T Consensus 195 l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 195 LMTRGAPPYPDVDSF-DITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 998 33333222 333333333222221112234569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=268.65 Aligned_cols=218 Identities=18% Similarity=0.223 Sum_probs=159.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++.+.... .....+|++|||.+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ 128 (337)
T cd07858 50 RTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSAN 128 (337)
T ss_pred HHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999333221 122358999999778999999654 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++|+|||++...... ..+
T Consensus 129 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~---------------------------------~~~----------- 164 (337)
T cd07858 129 VLHRDLKPSNLLLNANCDLKICDFGLARTTSEK---------------------------------GDF----------- 164 (337)
T ss_pred EecCCCCHHHEEEcCCCCEEECcCccccccCCC---------------------------------ccc-----------
Confidence 999999999999999999999998887332110 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
.....++..|+|||.+.+ ..++.++|||||||+
T Consensus 165 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i 198 (337)
T cd07858 165 ----------------------------------------------MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCI 198 (337)
T ss_pred ----------------------------------------------ccccccccCccChHHHhcCCCCCCcccHHHHHHH
Confidence 001356889999998865 358999999999999
Q ss_pred hhhccc---cCCCCchHH--HHHHHhhcC------------------------CCC---ccccccCchHHHHHHHcCCCC
Q 004989 301 LFELFC---PFSTGEEKT--RTMSSLRHR------------------------VLP---PQLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~--~~~~~l~~~------------------------~~p---~~~~~~~p~~~~Li~~~L~~d 348 (720)
+|+|++ ||...+... ......... ..+ .......+...+|+.+||+++
T Consensus 199 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 278 (337)
T cd07858 199 FAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFD 278 (337)
T ss_pred HHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCC
Confidence 999998 454322110 000000000 000 001122344559999999999
Q ss_pred CCCCCChHHHHcCcccCCCccch
Q 004989 349 PSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~l 371 (720)
|++|||+.++|+||||.......
T Consensus 279 P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 279 PSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred hhhccCHHHHHcCcchhhhcCcc
Confidence 99999999999999998865543
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=254.73 Aligned_cols=209 Identities=15% Similarity=0.223 Sum_probs=158.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..+|+.++||||+++++ .+..+. .++++||+ .|++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~ 121 (267)
T cd06610 46 LRKEVQAMSQCNHPNVVKYYT-SFVVGD---ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN 121 (267)
T ss_pred HHHHHHHHHhcCCCCEEEEEE-EEeeCC---EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 346777899999999999999 444433 57999999 899999999542 24589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||++++++.++|+|||.+.........
T Consensus 122 ~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~------------------------------------------- 158 (267)
T cd06610 122 GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR------------------------------------------- 158 (267)
T ss_pred CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc-------------------------------------------
Confidence 9999999999999999999999999887432111000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
. . .......|+..|+|||.+... .++.++|+|||||
T Consensus 159 ------------------------~----------------~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~ 195 (267)
T cd06610 159 ------------------------T----------------R---KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGI 195 (267)
T ss_pred ------------------------c----------------c---cccccccCChhhcChHHHccccCcCcccchHhHhH
Confidence 0 0 000113678999999998777 6899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCcccc------ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++|+|++ ||............+.. . ++.+. ...+...+|+.+||..||.+||++.++++||||
T Consensus 196 i~~~l~~g~~p~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 196 TAIELATGAAPYSKYPPMKVLMLTLQN-D-PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred HHHHHHhCCCCccccChhhhHHHHhcC-C-CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 9999999 55544333222222222 1 11111 122345699999999999999999999999997
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=266.65 Aligned_cols=210 Identities=16% Similarity=0.246 Sum_probs=157.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..++.+++||||+++++ ++.... ....+|++|||...+|.+++. ..+++..++.++.||+.||.|||++
T Consensus 61 ~~~e~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~ 136 (342)
T cd07879 61 AYRELTLLKHMQHENVIGLLD-VFTSAVSGDEFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSA 136 (342)
T ss_pred HHHHHHHHHhcCCCCccchhh-eecccccCCCCceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 347788999999999999999 443322 223579999996678888762 2489999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||++......
T Consensus 137 ~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~---------------------------------------------- 170 (342)
T cd07879 137 GIIHRDLKPGNLAVNEDCELKILDFGLARHADAE---------------------------------------------- 170 (342)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC----------------------------------------------
Confidence 9999999999999999999999999887321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
.....+++.|+|||.+.+. .++.++|||||||
T Consensus 171 -----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGv 203 (342)
T cd07879 171 -----------------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGC 203 (342)
T ss_pred -----------------------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHH
Confidence 0013568899999998764 4899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC------------------------CCC-cc----ccccCchHHHHHHHcCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHR------------------------VLP-PQ----LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~------------------------~~p-~~----~~~~~p~~~~Li~~~L~~ 347 (720)
++|||++ ||............+... ..+ .. +....+...+|+.+||+.
T Consensus 204 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 283 (342)
T cd07879 204 IMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLEL 283 (342)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCC
Confidence 9999999 665543222111111100 000 00 112234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccc
Q 004989 348 EPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+||++.+++.||||......
T Consensus 284 dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 284 DVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred ChhhCcCHHHHhcCcchhhcccc
Confidence 99999999999999999988553
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-29 Score=269.22 Aligned_cols=216 Identities=14% Similarity=0.126 Sum_probs=155.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCC----------CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAA----------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~----------~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+|..+|..++||||+++++.+...... ...+|++|||.+++|.+++... .+++..++.++.||+.||.
T Consensus 51 ~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~ 128 (342)
T cd07854 51 REIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMYQLLRGLK 128 (342)
T ss_pred HHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHHHHHHHHH
Confidence 677789999999999999844433221 1247999999667999988543 4899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 136 AAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|||+.||+||||||+||+++ .++.++++|||.+......... ..
T Consensus 129 ~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~----- 173 (342)
T cd07854 129 YIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------------------------KG----- 173 (342)
T ss_pred HHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------------------------cc-----
Confidence 99999999999999999998 4557899988877332110000 00
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCcccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sD 293 (720)
......|+..|+|||.+.+ ..++.++|
T Consensus 174 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~D 201 (342)
T cd07854 174 ----------------------------------------------------YLSEGLVTKWYRSPRLLLSPNNYTKAID 201 (342)
T ss_pred ----------------------------------------------------ccccccccccccCHHHHhCccccCchhh
Confidence 0001256889999998755 44889999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcC----------------------CCCc-----cc-cccCchHHHHHH
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR----------------------VLPP-----QL-LLKFPKEASFCL 342 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~----------------------~~p~-----~~-~~~~p~~~~Li~ 342 (720)
||||||++|+|++ ||............+... ..++ .+ ........+|+.
T Consensus 202 iwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 281 (342)
T cd07854 202 MWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLE 281 (342)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHH
Confidence 9999999999999 676544332222221110 0000 01 112234459999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 343 WLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||.+||.+|||+.++|.||||+....+
T Consensus 282 ~~L~~dP~~R~t~~ell~h~~~~~~~~~ 309 (342)
T cd07854 282 QILTFNPMDRLTAEEALMHPYMSCYSCP 309 (342)
T ss_pred HHhCCCchhccCHHHHhCCCccccccCC
Confidence 9999999999999999999999865433
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=255.41 Aligned_cols=207 Identities=14% Similarity=0.080 Sum_probs=155.1
Q ss_pred hhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..++..++||||+++++.++... ......+++||| .+++|.+++.. ....+++..++.++.||+.||.|
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 127 (272)
T cd05075 48 LSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEY 127 (272)
T ss_pred HHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 36777899999999999998443322 122357899999 88999998831 22348999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+||||||+|||++.++.++|+|||++......... .
T Consensus 128 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------~-- 169 (272)
T cd05075 128 LSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY------------------------------------R-- 169 (272)
T ss_pred HHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccce------------------------------------e--
Confidence 99999999999999999999999999999887432111000 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchh
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
......+++.|+|||.+.+..++.++||||
T Consensus 170 --------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~s 199 (272)
T cd05075 170 --------------------------------------------------QGRIAKMPVKWIAIESLADRVYTTKSDVWS 199 (272)
T ss_pred --------------------------------------------------cCCcccCCcccCCHHHccCCCcChHHHHHH
Confidence 000023467899999999888999999999
Q ss_pred hhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|||++ ||..... ......+..+..++..........+++.+||+++|.+|||+.++++
T Consensus 200 lG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 200 FGVTMWEIATRGQTPYPGVEN-SEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred HHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999999987 5554333 3444445544333322223344569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=251.82 Aligned_cols=211 Identities=21% Similarity=0.231 Sum_probs=163.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ .+.... ...+++++|| .+++|.+++.+.. .+++..++.++.|++.||.|||+.|
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (260)
T cd06606 45 ALEREIRILSSLQHPNIVRYYG-SERDEE-KNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNG 121 (260)
T ss_pred HHHHHHHHHHHcCCCCEeeEEE-EEecCC-CCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446777999999999999999 443331 2367999999 7999999996544 6999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+........ .
T Consensus 122 ~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------------------------~----------- 157 (260)
T cd06606 122 IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET---------------------------------G----------- 157 (260)
T ss_pred ccccCCCHHHEEEcCCCCEEEcccccEEecccccc---------------------------------c-----------
Confidence 99999999999999999999999988743221100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......++..|+|||.+.+..++.++||||||+++
T Consensus 158 --------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 193 (260)
T cd06606 158 --------------------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTV 193 (260)
T ss_pred --------------------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||............+......+.++... +...+|+.+||..+|.+||++.++++||||
T Consensus 194 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 194 IEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 99999 6655543333444444322333333333 344599999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=271.37 Aligned_cols=263 Identities=14% Similarity=0.164 Sum_probs=172.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..||+..+.++||+||. .|++.+ .+|+||+| .||++..+|.+.+- |+|..++.|+..+.+|+++.|..|+||
T Consensus 678 AERDILAEADn~WVVrLyy-SFQDkd---nLYFVMdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVHkmGFIH 752 (1034)
T KOG0608|consen 678 AERDILAEADNEWVVRLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVHKMGFIH 752 (1034)
T ss_pred hhhhhHhhcCCcceEEEEE-EeccCC---ceEEEEeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHhcccee
Confidence 4556999999999999999 777776 46999999 99999999966554 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||.|||+|..+.-..- ...++ .+|-. +..+
T Consensus 753 RDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd---------------------skYYq----~gdH~--------RqDS- 798 (1034)
T KOG0608|consen 753 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD---------------------SKYYQ----EGDHH--------RQDS- 798 (1034)
T ss_pred cccCccceEEccCCceeeeeccccccceeccc---------------------ccccc----CCCcc--------cccc-
Confidence 99999999999999999999999965421100 00000 00000 0000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcc--cCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~--~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+ .-...+.+.+-+...-+.+ .+..-......+||+.|+|||++....|+..+|+||.|||||
T Consensus 799 -m---------------ep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 799 -M---------------EPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred -C---------------CCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 0000111111110000000 112222233479999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-CCCCccccccCchHH-HHHHHcCCCCCCCCC---ChHHHHcCcccCCCccchHHH
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRP---KMGELLQSEFLNEPRDSMEER 374 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rp---ta~eiL~hp~~~~~~~~l~e~ 374 (720)
||+. ||.........+..+.= ..+.-....+.++++ +||.++. .++++|. .++++..||||+...-.. .+
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDfss-lR 940 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDFSS-LR 940 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccchHh-hh
Confidence 9999 67654433222221110 111111223344444 7877754 5778886 577899999999984433 33
Q ss_pred HHHHHHhhhhh
Q 004989 375 EAAIELREQID 385 (720)
Q Consensus 375 ~~~~~~~e~~~ 385 (720)
+...+....+.
T Consensus 941 kq~ApYIP~It 951 (1034)
T KOG0608|consen 941 KQRAPYIPRIT 951 (1034)
T ss_pred hccCCcCcccc
Confidence 33333444333
|
|
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=257.45 Aligned_cols=203 Identities=19% Similarity=0.230 Sum_probs=155.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
...|..++..++||||+++++ ++.... ..++++|| .+++|.+++... ...+++..++.++
T Consensus 55 ~~~e~~~~~~l~h~~iv~~~~-~~~~~~---~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (283)
T cd05091 55 FKHEAMMRSRLQHPNIVCLLG-VVTKEQ---PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV 130 (283)
T ss_pred HHHHHHHHhcCCCCCcCeEEE-EEcCCC---ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH
Confidence 346778899999999999999 554443 47899999 889999998321 1247888999999
Q ss_pred HHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccc
Q 004989 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 131 ~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------------------------------- 177 (283)
T cd05091 131 TQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAA--------------------------------- 177 (283)
T ss_pred HHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccc---------------------------------
Confidence 99999999999999999999999999999999999999887432110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC
Q 004989 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
++ .. ......+++.|+|||.+.+..
T Consensus 178 -~~------------------------------------~~------------------~~~~~~~~~~y~aPE~~~~~~ 202 (283)
T cd05091 178 -DY------------------------------------YK------------------LMGNSLLPIRWMSPEAIMYGK 202 (283)
T ss_pred -hh------------------------------------ee------------------eccCccCCccccCHHHHhcCC
Confidence 00 00 000124578899999998888
Q ss_pred CCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||...... .....+.....++. ....|. ..+|+..||+.+|.+||++.+|++
T Consensus 203 ~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 203 FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVIEMIRNRQVLPC-PDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred CCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCC-CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 9999999999999999997 55444333 44444444443332 233444 459999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=256.96 Aligned_cols=204 Identities=14% Similarity=0.094 Sum_probs=155.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++..++||||+++++ ++... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 55 ~~~~e~~~l~~~~~~~i~~~~~-~~~~~----~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 129 (279)
T cd05109 55 EILDEAYVMAGVGSPYVCRLLG-ICLTS----TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR 129 (279)
T ss_pred HHHHHHHHHHhcCCCCCceEEE-EEcCC----CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447778899999999999999 44332 35789999 899999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........ .
T Consensus 130 iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~--------------------------------~----------- 166 (279)
T cd05109 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE--------------------------------Y----------- 166 (279)
T ss_pred eeccccccceEEEcCCCcEEECCCCceeecccccce--------------------------------e-----------
Confidence 999999999999999999999999887432111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+++.|+|||.+.+..++.++|||||||++
T Consensus 167 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 201 (279)
T cd05109 167 ---------------------------------------------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTV 201 (279)
T ss_pred ---------------------------------------------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHH
Confidence 00001346789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ......+.....++......+...+++.+||..||+.||++.+++.
T Consensus 202 ~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 202 WELMTFGAKPYDGIPA-REIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHHcCCCCCCCCCCH-HHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99987 4443322 2233334443333333333445569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=260.31 Aligned_cols=204 Identities=15% Similarity=0.176 Sum_probs=154.9
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..|..+++++ +||||+++++ .+.... ..|++||| .+++|.+++.. ....+++.+++.++.||+.||.|||++|
T Consensus 86 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 161 (302)
T cd05055 86 MSELKIMSHLGNHENIVNLLG-ACTIGG---PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN 161 (302)
T ss_pred HHHHHHHHhccCCCCcceEEE-EEecCC---ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4677789999 8999999999 554443 57999999 88999999954 3334899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+|||++.++.++++|||.+....... .+
T Consensus 162 ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----------- 197 (302)
T cd05055 162 CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDS---------------------------------NY----------- 197 (302)
T ss_pred eehhhhccceEEEcCCCeEEECCCcccccccCCC---------------------------------ce-----------
Confidence 9999999999999999999999998874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||.+.+..++.++|||||||++
T Consensus 198 ---~-----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil 233 (302)
T cd05055 198 ---V-----------------------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL 233 (302)
T ss_pred ---e-----------------------------------------ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHH
Confidence 0 00002357789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||............+.....++......+...+|+.+||.++|++|||+.|+++
T Consensus 234 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 234 WEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99986 555444333333333333222222222345569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=256.70 Aligned_cols=195 Identities=17% Similarity=0.219 Sum_probs=145.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.++||||+++++ ++.... ..++|||| .+++|..++.+....+++..+..++.||+.||.|||++||+
T Consensus 64 ~~~~~~~~~l~h~niv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ii 139 (274)
T cd05076 64 FETASLMSQVSHIHLAFVHG-VCVRGS---ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLV 139 (274)
T ss_pred HHHHHHHhcCCCCCeeeEEE-EEEeCC---ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 35667899999999999999 554443 56899999 99999999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCc-------eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 144 VHNVRPSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 144 HrDLKP~NILl~~~~~-------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||||||+|||++..+. ++++|||.+ ...
T Consensus 140 H~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~---------------------------------------------~~~ 174 (274)
T cd05076 140 HGNVCAKNILLARLGLAEGTSPFIKLSDPGVS---------------------------------------------FTA 174 (274)
T ss_pred CCCCCcccEEEeccCcccCccceeeecCCccc---------------------------------------------ccc
Confidence 9999999999976432 455555443 110
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccch
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIw 295 (720)
.. .....++..|+|||.+.+ ..++.++|||
T Consensus 175 ~~-------------------------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~ 205 (274)
T cd05076 175 LS-------------------------------------------------REERVERIPWIAPECVPGGNSLSTAADKW 205 (274)
T ss_pred cc-------------------------------------------------ccccccCCcccCchhhcCCCCCCcHHHHH
Confidence 00 000245778999999876 4489999999
Q ss_pred hhhchhhhccc----cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||++|||++ ||....... ....+.. ...|+ ...+...+|+.+||+.+|++|||+.++|++
T Consensus 206 slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 206 SFGTTLLEICFDGEVPLKERTPSE-KERFYEKKHRLPE---PSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHHHHHHHhCCCCCccccChHH-HHHHHHhccCCCC---CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 99999999964 555433221 1111221 11222 234567799999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=252.22 Aligned_cols=205 Identities=16% Similarity=0.133 Sum_probs=155.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++++++||||+++++ .+.. ..++++||| .+++|.+++.+.. ..+++..++.++.||+.||.|||++
T Consensus 42 ~~~~e~~~l~~l~h~~iv~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 116 (257)
T cd05040 42 DFLKEAAIMHSLDHENLIRLYG-VVLT----HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK 116 (257)
T ss_pred HHHHHHHHHhhcCCCCccceeE-EEcC----CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 4457888999999999999999 4433 367999999 8999999995544 4689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||||+||+++.++.+||+|||.+...+..... +
T Consensus 117 ~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~---------- 154 (257)
T cd05040 117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--------------------------------Y---------- 154 (257)
T ss_pred CccccccCcccEEEecCCEEEeccccccccccccccc--------------------------------e----------
Confidence 9999999999999999999999999987443211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.. .....++..|+|||.+.+..++.++|||||||+
T Consensus 155 -------------------------~~--------------------~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~ 189 (257)
T cd05040 155 -------------------------VM--------------------EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVT 189 (257)
T ss_pred -------------------------ec--------------------ccCCCCCceecCHHHhcccCcCchhhhHHHHHH
Confidence 00 001245778999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... .....+............. +...+++.+||..+|++||++.++++
T Consensus 190 l~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 190 LWEMFTYGEEPWAGLSGS-QILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 999997 55433333 2333333211111112223 34559999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=257.30 Aligned_cols=203 Identities=14% Similarity=0.168 Sum_probs=150.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..+++.++||||+++++ ++.... ..+++||| .|++|.+++.... ..+++..++.++.||+.||.||
T Consensus 57 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L 132 (277)
T cd05036 57 LMEALIMSKFNHQNIVRLIG-VSFERL---PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132 (277)
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEccCC---CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 36777899999999999999 443332 46899999 8999999994432 2489999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 138 HSQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|++|++||||||+||+++.++ .++|+|||.++...... .+.
T Consensus 133 H~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~--- 176 (277)
T cd05036 133 EENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRAS---------------------------------YYR--- 176 (277)
T ss_pred HHCCEeecccchheEEEeccCCCcceEeccCccccccCCcc---------------------------------cee---
Confidence 999999999999999998654 58998888774321100 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
.......+..|+|||++.+..++.++||
T Consensus 177 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di 204 (277)
T cd05036 177 ----------------------------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDV 204 (277)
T ss_pred ----------------------------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHH
Confidence 0000133567999999988889999999
Q ss_pred hhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||++|||++ ||...... ..+..+.....+ ..+... +...+|+.+||..+|++||++.++++|
T Consensus 205 wslG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 205 WSFGVLLWEIFSLGYMPYPGRTNQ-EVMEFVTGGGRL-DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999996 66654333 222223222111 222223 445599999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=257.91 Aligned_cols=212 Identities=14% Similarity=0.119 Sum_probs=159.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------CCCCHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVE 132 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------~~l~~~~~~~i~~QIl~ 132 (720)
+..+|..++..++||||+++++ ++.... ..|++||| .+++|.+++.+.. ..++...+..++.||+.
T Consensus 55 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 130 (288)
T cd05061 55 EFLNEASVMKGFTCHHVVRLLG-VVSKGQ---PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 130 (288)
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEcCCC---CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHH
Confidence 3346777899999999999999 444443 57999999 8999999995321 23467788999999999
Q ss_pred HHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccc
Q 004989 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||.|||++||+||||||+||+++.++.++|+|||+++..... ++.
T Consensus 131 ~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~----------------------------------~~~- 175 (288)
T cd05061 131 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET----------------------------------DYY- 175 (288)
T ss_pred HHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccc----------------------------------ccc-
Confidence 999999999999999999999999999999999887432110 000
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccc
Q 004989 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
.......++..|+|||.+.+..++.++
T Consensus 176 -----------------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~ 202 (288)
T cd05061 176 -----------------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTSS 202 (288)
T ss_pred -----------------------------------------------------cccCCCcccccccCHHHhccCCCChHh
Confidence 000012456779999999888899999
Q ss_pred cchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc------Cc
Q 004989 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ------SE 362 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~------hp 362 (720)
|||||||++|||++ ||...... .....+.....++......+...+++.+||+++|++|||+.++++ ||
T Consensus 203 DvwslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 281 (288)
T cd05061 203 DMWSFGVVLWEITSLAEQPYQGLSNE-QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 281 (288)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence 99999999999997 56543332 333444333333322222345669999999999999999999987 88
Q ss_pred ccCCC
Q 004989 363 FLNEP 367 (720)
Q Consensus 363 ~~~~~ 367 (720)
||.+.
T Consensus 282 ~~~~~ 286 (288)
T cd05061 282 SFPEV 286 (288)
T ss_pred CCCCC
Confidence 88764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=252.52 Aligned_cols=206 Identities=17% Similarity=0.233 Sum_probs=158.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+++.++||||+++++ .+.... ..|+++|| .+++|.+++.. ....+++..++.++.||+.||.|||+.|
T Consensus 46 ~~~E~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (257)
T cd08225 46 SKKEVILLAKMKHPNIVTFFA-SFQENG---RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK 121 (257)
T ss_pred HHHHHHHHHhCCCCChhhhhh-eeccCC---eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346778999999999999999 454443 67999999 89999999944 3335899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc-eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 142 IVVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~-vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+|+||||+||+++.++. ++++|||.+...+.. .+.
T Consensus 122 i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---------------------------------~~~---------- 158 (257)
T cd08225 122 ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS---------------------------------MEL---------- 158 (257)
T ss_pred cccccCCHHHEEEcCCCCeEEecccccchhccCC---------------------------------ccc----------
Confidence 999999999999997754 699888876332111 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....|++.|+|||.+.+..++.++|+|||||+
T Consensus 159 -----------------------------------------------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~i 191 (257)
T cd08225 159 -----------------------------------------------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCV 191 (257)
T ss_pred -----------------------------------------------ccccCCCccccCHHHHcCCCCCchhhHHHHHHH
Confidence 001357889999999988889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|||++ ||........ ...+.....++..........+++.+||..+|++|||+.++++||||
T Consensus 192 l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 192 LYELCTLKHPFEGNNLHQL-VLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHhCCCCCCCccHHHH-HHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 999998 5554433322 22333333333322233455699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=256.32 Aligned_cols=208 Identities=16% Similarity=0.245 Sum_probs=159.1
Q ss_pred hchhhhhhcccCC---CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~---HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+.++|..+++.+. ||||+++++ .+..+. .+|++||| .|++|.+++... .+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~~~~vi~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh 118 (277)
T cd06917 45 DIQREVALLSQLRQSQPPNITKYYG-SYLKGP---RLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH 118 (277)
T ss_pred HHHHHHHHHHHhccCCCCCeeeEee-eeeeCC---EEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence 3446677777776 999999999 444432 57999999 899999998553 5899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+|+||+|+||+++.++.++++|||.+........
T Consensus 119 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~------------------------------------------ 156 (277)
T cd06917 119 KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS------------------------------------------ 156 (277)
T ss_pred hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc------------------------------------------
Confidence 99999999999999999999999999987743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
......|+..|+|||.+.+. .++.++|+|||
T Consensus 157 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl 188 (277)
T cd06917 157 ------------------------------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSL 188 (277)
T ss_pred ------------------------------------------------ccccccCCcceeCHHHhccCCccccchhHHHH
Confidence 00113578899999998754 37899999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++|+|++ ||....... ....+... .++.+.. .. +...+|+.+||..||++||++.+++.||||+...
T Consensus 189 G~~l~~ll~g~~p~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 189 GITIYEMATGNPPYSDVDAFR-AMMLIPKS-KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHHhCCCCCCCCChhh-hhhccccC-CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 999999999 565443322 22222222 2333322 13 3455999999999999999999999999997763
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=253.48 Aligned_cols=204 Identities=13% Similarity=0.140 Sum_probs=156.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 52 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i 127 (266)
T cd05033 52 FLTEASIMGQFDHPNIIRLEG-VVTKSR---PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY 127 (266)
T ss_pred HHHHHHHHHhCCCCCcceEeE-EEecCC---ceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 346777899999999999999 444432 57999999 8999999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+....... ..+
T Consensus 128 ~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~--------------------------------~~~------------ 163 (266)
T cd05033 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE--------------------------------ATY------------ 163 (266)
T ss_pred ccCCCCcceEEEcCCCCEEECccchhhcccccc--------------------------------cce------------
Confidence 999999999999999999999998874432100 000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 164 --------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~ 199 (266)
T cd05033 164 --------------------------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMW 199 (266)
T ss_pred --------------------------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHH
Confidence 000013467899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... .....+.....++......+...+|+.+||+.+|++||++.++++
T Consensus 200 ~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~ 260 (266)
T cd05033 200 EVMSYGERPYWDMSNQ-DVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVS 260 (266)
T ss_pred HHHccCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9987 55443322 334444443332322233344559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=265.14 Aligned_cols=218 Identities=17% Similarity=0.197 Sum_probs=161.9
Q ss_pred chhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++.+.... .....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi 124 (330)
T cd07834 46 ILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANV 124 (330)
T ss_pred HHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346777899999999999999443332 2334679999996679999995544 69999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+.........
T Consensus 125 ~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~--------------------------------------------- 159 (330)
T cd07834 125 IHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE--------------------------------------------- 159 (330)
T ss_pred ecCCCCHHHEEEcCCCCEEEcccCceEeecccccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
+.......++++|+|||.+.+. .++.++|||||||++
T Consensus 160 ------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il 197 (330)
T cd07834 160 ------------------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIF 197 (330)
T ss_pred ------------------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHH
Confidence 0000113578999999999888 689999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCcc----------------------------ccccCchHHHHHHHcCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQ----------------------------LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~----------------------------~~~~~p~~~~Li~~~L~~d 348 (720)
|+|++ ||...... ..+..+.. +..++. .....+...+||.+||+++
T Consensus 198 ~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 276 (330)
T cd07834 198 AELLTRKPLFPGRDYI-DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFD 276 (330)
T ss_pred HHHHcCCCCcCCCCHH-HHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCC
Confidence 99999 55443322 11111111 000000 0112234459999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004989 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|.+|||+.++++||||......
T Consensus 277 P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 277 PKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hhhCCCHHHHHhCccHHhhccc
Confidence 9999999999999999987553
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=250.21 Aligned_cols=204 Identities=16% Similarity=0.166 Sum_probs=156.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++..++||||+++++ ++.... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 38 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 113 (250)
T cd05085 38 KFLSEARILKQYDHPNIVKLIG-VCTQRQ---PIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN 113 (250)
T ss_pred HHHHHHHHHHhCCCCCcCeEEE-EEecCC---ccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4446778899999999999999 554443 57999999 899999999655556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||++...... .+ .
T Consensus 114 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~----------------------------------~~---~------- 149 (250)
T cd05085 114 CIHRDLAARNCLVGENNVLKISDFGMSRQEDDG----------------------------------IY---S------- 149 (250)
T ss_pred eeecccChheEEEcCCCeEEECCCccceecccc----------------------------------cc---c-------
Confidence 999999999999999999999998877321000 00 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||++.+..++.++|||||||++
T Consensus 150 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll 184 (250)
T cd05085 150 ---------------------------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILL 184 (250)
T ss_pred ---------------------------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHH
Confidence 00001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.............+...+|+.+||..+|++||++.++++
T Consensus 185 ~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 185 WETFSLGVCPYPGMTNQ-QAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred HHHhcCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99997 66554333 333444433222222223345569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=262.70 Aligned_cols=225 Identities=17% Similarity=0.178 Sum_probs=161.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++..+. .++++|||..++|.+++.... .+++..+..++.||+.||.|||+.||+
T Consensus 67 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~~i~ 141 (335)
T PTZ00024 67 TLRELKIMNEIKHENIMGLVD-VYVEGD---FINLVMDIMASDLKKVVDRKI-RLTESQVKCILLQILNGLNVLHKWYFM 141 (335)
T ss_pred HHHHHHHHHhCCCcceeeeeE-EEecCC---cEEEEEeccccCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 447788999999999999999 444443 679999996679999995443 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+...+.......... +... .
T Consensus 142 H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~--------------------------~~~~----~------ 185 (335)
T PTZ00024 142 HRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSK--------------------------DETM----Q------ 185 (335)
T ss_pred cccccHHHeEECCCCCEEECCccceeecccccccccccc--------------------------cccc----c------
Confidence 999999999999999999999998865433211100000 0000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
.........+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 186 ----------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 225 (335)
T PTZ00024 186 ----------------------------------------RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFA 225 (335)
T ss_pred ----------------------------------------ccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHH
Confidence 000001135688999999997654 799999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc---CCC--------------------Cccc----cccCchHHHHHHHcCCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH---RVL--------------------PPQL----LLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~---~~~--------------------p~~~----~~~~p~~~~Li~~~L~~dP~~R 352 (720)
||++ ||....... .+..+.. ... ++.+ ........+|+.+||.++|++|
T Consensus 226 el~tg~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 304 (335)
T PTZ00024 226 ELLTGKPLFPGENEID-QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLER 304 (335)
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhc
Confidence 9999 554443322 1111111 000 0000 1112344599999999999999
Q ss_pred CChHHHHcCcccCCCccc
Q 004989 353 PKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~ 370 (720)
||++|+|.||||+.....
T Consensus 305 ~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 305 ISAKEALKHEYFKSDPLP 322 (335)
T ss_pred cCHHHHhcCcccCCCCCC
Confidence 999999999999976443
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=286.44 Aligned_cols=103 Identities=10% Similarity=0.093 Sum_probs=90.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.... .+|+|||| .|++|.++|...+ .+++..++.|+.||+.||+|||++|
T Consensus 50 ~~~~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~g 124 (669)
T cd05610 50 QVQAERDALALSKSPFIVHLYY-SLQSAN---NVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRHG 124 (669)
T ss_pred HHHHHHHHHHhcCCCCcCeEEE-EEEECC---EEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457777888999999999998 554443 68999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
||||||||+||||+.++.++|+|||+++.
T Consensus 125 IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 125 IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-28 Score=255.54 Aligned_cols=206 Identities=17% Similarity=0.243 Sum_probs=154.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++++++||||+++++ ++.++ ...|++|||.+++|.+++.... ..+++..++.++.||+.||.|||++|++
T Consensus 46 ~~E~~~l~~l~~~~iv~~~~-~~~~~---~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~ 121 (283)
T cd07835 46 IREISLLKELNHPNIVRLLD-VVHSE---NKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVL 121 (283)
T ss_pred HHHHHHHHhcCCCCccCHhh-eeccC---CeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35777899999999999999 44444 3679999996679999994433 3589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+...+.... .
T Consensus 122 H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--------------------------------~-------------- 155 (283)
T cd07835 122 HRDLKPQNLLIDREGALKLADFGLARAFGVPVR--------------------------------T-------------- 155 (283)
T ss_pred CCCCCHHHEEEcCCCcEEEeecccccccCCCcc--------------------------------c--------------
Confidence 999999999999999999999988743211100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
.....+++.|+|||++.+. .++.++|||||||++|
T Consensus 156 --------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~ 191 (283)
T cd07835 156 --------------------------------------------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFA 191 (283)
T ss_pred --------------------------------------------cCccccccCCCCCceeecCcccCcHHHHHHHHHHHH
Confidence 0012457889999988765 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCC-------------------CC----c---c-ccccCchHHHHHHHcCCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRV-------------------LP----P---Q-LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~-------------------~p----~---~-~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
+|++ ||................. ++ + . .....+...+|+.+||+++|.+|
T Consensus 192 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 271 (283)
T cd07835 192 EMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKR 271 (283)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhC
Confidence 9999 5554433222222111100 00 0 0 11122344599999999999999
Q ss_pred CChHHHHcCccc
Q 004989 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
||+.|++.||||
T Consensus 272 pt~~~il~~~~~ 283 (283)
T cd07835 272 ISAKAALQHPYF 283 (283)
T ss_pred cCHHHHhcCCCC
Confidence 999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=248.71 Aligned_cols=205 Identities=17% Similarity=0.246 Sum_probs=159.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...+|..++++++||||+++++ ++.... ..++++|| .|++|.+++......+++..+..++.||+.||.|||+.|
T Consensus 43 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 118 (253)
T cd05122 43 KIINEIQILKKCKHPNIVKYYG-SYLKKD---ELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG 118 (253)
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecCC---eEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 3446777899999999999999 444442 57999999 889999999665456999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+...+....
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 153 (253)
T cd05122 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--------------------------------------------- 153 (253)
T ss_pred EecCCCCHHHEEEccCCeEEEeecccccccccccc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....|+..|+|||.+.+..++.++||||||+++
T Consensus 154 ----------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il 187 (253)
T cd05122 154 ----------------------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITA 187 (253)
T ss_pred ----------------------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHH
Confidence 0013568899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc--CchHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK--FPKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~--~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|+|++ ||.......... .......+...... .....+|+.+||..||++|||+.++|+|||
T Consensus 188 ~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 188 IELAEGKPPYSELPPMKALF-KIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHhCCCCCCCCchHHHHH-HHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 99999 555443322222 22222222211111 234459999999999999999999999998
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=250.14 Aligned_cols=206 Identities=21% Similarity=0.272 Sum_probs=161.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
...|..++..++|||++++++ .+... ..+++++|| .+++|.+++... ...+++..+..++.||+.||.|||+
T Consensus 46 ~~~e~~~l~~l~~~~~~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~ 121 (258)
T cd08215 46 ALNEVKILKKLNHPNIIKYYE-SFEEK---GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS 121 (258)
T ss_pred HHHHHHHHHhcCCCChhheEE-EEecC---CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 346777899999999999999 44333 368999999 889999999553 3569999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|++|+||+|+||+++.++.++|+|||.+...+....
T Consensus 122 ~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------- 158 (258)
T cd08215 122 RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD------------------------------------------- 158 (258)
T ss_pred CCEecccCChHHeEEcCCCcEEECCccceeecccCcc-------------------------------------------
Confidence 9999999999999999999999999887733211100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......|++.|+|||.+.+..++.++|+||||+
T Consensus 159 -----------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~ 191 (258)
T cd08215 159 -----------------------------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGC 191 (258)
T ss_pred -----------------------------------------------eecceeeeecccChhHhccCCCCccccHHHHHH
Confidence 000135788999999998888999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++|+|++ ||..... ......+.....++..........+++.+||..+|++|||+.++|+||||
T Consensus 192 ~~~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 192 VLYELCTLKHPFEGENL-LELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHcCCCCCCCCcH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 9999999 5554433 23333343333333222223344599999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=252.53 Aligned_cols=197 Identities=16% Similarity=0.189 Sum_probs=148.8
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..+|+.++||||+++++ ++... ..+++||| .+++|.+++......++...++.++.||+.||.|||++
T Consensus 46 ~~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 120 (259)
T cd05037 46 LAFFETASLMSQLSHKHLVKLYG-VCVRD----ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK 120 (259)
T ss_pred HHHHHHHHHHHcCCCcchhheee-EEecC----CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 34446777999999999999999 44332 35899999 89999999966554689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC-------ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 141 GIVVHNVRPSCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~-------~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
||+||||||+||+++.++ .++++|||.+......
T Consensus 121 ~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------------------------------------- 161 (259)
T cd05037 121 KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR--------------------------------------- 161 (259)
T ss_pred CeecccCccceEEEecCccccCCceeEEeCCCCcccccccc---------------------------------------
Confidence 999999999999999877 6888777766321100
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCcc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCA 291 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~ 291 (720)
....++..|+|||++.+. .++.+
T Consensus 162 -------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~ 186 (259)
T cd05037 162 -------------------------------------------------------EERVERIPWIAPECIRNGQASLTIA 186 (259)
T ss_pred -------------------------------------------------------cccccCCCccChhhhcCCCCCcchh
Confidence 002456779999999877 68999
Q ss_pred ccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 292 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||...... ............+ ........+|+.+||..+|.+|||+.++++
T Consensus 187 ~Di~slG~~~~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 187 ADKWSFGTTLLEICSNGEEPLSTLSSS-EKERFYQDQHRLP--MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred hHHHHHHHHHHHHHhCCCCCcccCCch-hHHHHHhcCCCCC--CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999999999999987 34333211 1111111111111 112256679999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-28 Score=257.89 Aligned_cols=210 Identities=19% Similarity=0.261 Sum_probs=155.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++++++||||+++++ ++.+.. ..|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~ 124 (294)
T PLN00009 49 IREISLLKEMQHGNIVRLQD-VVHSEK---RLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVL 124 (294)
T ss_pred HHHHHHHHhccCCCEeeEEE-EEecCC---eEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36778999999999999999 454443 6899999976789988843 333468889999999999999999999999
Q ss_pred eccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 144 VHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 144 HrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
||||||+||+++. ++.+|++|||.+...+....
T Consensus 125 H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 158 (294)
T PLN00009 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR---------------------------------------------- 158 (294)
T ss_pred CCCCCcceEEEECCCCEEEEcccccccccCCCcc----------------------------------------------
Confidence 9999999999985 55789999888743221100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......+++.|+|||.+.+. .++.++|||||||++
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~ 194 (294)
T PLN00009 159 --------------------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIF 194 (294)
T ss_pred --------------------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence 00013568899999998764 478999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CC-----------------C---Ccc-----ccccCchHHHHHHHcCCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RV-----------------L---PPQ-----LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~-----------------~---p~~-----~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
|+|++ ||............+.. .. . ++. .....+...+|+.+||+.+|++
T Consensus 195 ~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 274 (294)
T PLN00009 195 AEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSK 274 (294)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhh
Confidence 99999 55544333222222110 00 0 000 0112344569999999999999
Q ss_pred CCChHHHHcCcccCCCc
Q 004989 352 RPKMGELLQSEFLNEPR 368 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~ 368 (720)
||++.++++||||....
T Consensus 275 Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 275 RITARAALEHEYFKDLG 291 (294)
T ss_pred CcCHHHHhcCchHhHHh
Confidence 99999999999998763
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=251.63 Aligned_cols=203 Identities=19% Similarity=0.204 Sum_probs=154.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+++.++|||||++++ ++... .++++||| .+++|.++|.+.. .+++..++.++.||+.||.|||..|+
T Consensus 43 ~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i 116 (257)
T cd05060 43 FLREASVMAQLDHPCIVRLIG-VCKGE----PLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHF 116 (257)
T ss_pred HHHHHHHHHhcCCCCeeeEEE-EEcCC----ceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 336778999999999999999 44432 47999999 8899999995544 58999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+|||++.++.++|+|||.+...+... .+
T Consensus 117 ~H~di~p~nili~~~~~~kl~df~~~~~~~~~~---------------------------------~~------------ 151 (257)
T cd05060 117 VHRDLAARNVLLVNRHQAKISDFGMSRALGAGS---------------------------------DY------------ 151 (257)
T ss_pred eccCcccceEEEcCCCcEEeccccccceeecCC---------------------------------cc------------
Confidence 999999999999999999999998874321110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+ . ......++..|+|||.+.+..++.++|||||||++|
T Consensus 152 ---------~--------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 189 (257)
T cd05060 152 ---------Y--------------R-------------------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLW 189 (257)
T ss_pred ---------c--------------c-------------------cccCccccccccCHHHhcCCCCCccchHHHHHHHHH
Confidence 0 0 000012356799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+......+...+|+.+||.++|.+||++.++++
T Consensus 190 ~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 190 EAFSYGAKPYGEMKGA-EVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHcCCCCCcccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9996 44443332 333444433322222223345569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=255.26 Aligned_cols=204 Identities=17% Similarity=0.157 Sum_probs=154.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------CCCCHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------~~l~~~~~~~i~~ 128 (720)
..+|..++..++||||+++++ ++.... ..+++||| .+++|.+++.... ..+++..++.++.
T Consensus 54 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 129 (280)
T cd05092 54 FQREAELLTVLQHQHIVRFYG-VCTEGR---PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIAS 129 (280)
T ss_pred HHHHHHHHhcCCCCCCceEEE-EEecCC---ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHH
Confidence 336677899999999999999 554443 57999999 8999999995432 2478999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 130 qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~---------------------------------- 175 (280)
T cd05092 130 QIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST---------------------------------- 175 (280)
T ss_pred HHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCC----------------------------------
Confidence 9999999999999999999999999999999999999887322110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
++ .. ......+++.|+|||.+.+..+
T Consensus 176 ~~----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~ 201 (280)
T cd05092 176 DY----------------------------------YR--------------------VGGRTMLPIRWMPPESILYRKF 201 (280)
T ss_pred ce----------------------------------ee--------------------cCCCccccccccCHHHhccCCc
Confidence 00 00 0000235678999999998889
Q ss_pred Cccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++|||||||++|||++ ||...... .....+..+..+.......+...+|+.+||+.||.+||++.+|++
T Consensus 202 ~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 202 TTESDIWSFGVVLWEIFTYGKQPWYQLSNT-EAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred CchhhHHHHHHHHHHHHcCCCCCCccCCHH-HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 999999999999999997 44433333 233333333332222233355669999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=259.83 Aligned_cols=207 Identities=15% Similarity=0.199 Sum_probs=159.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+.... ..|+|+|| .+++|.+++.+. .+++.++..++.||+.||.|||++|++
T Consensus 64 ~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~ 137 (293)
T cd06647 64 INEILVMRENKHPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVI 137 (293)
T ss_pred HHHHHHHhhcCCCCeeehhh-eeeeCC---cEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 46777899999999999999 444433 57999999 899999999543 378999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 138 H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------- 170 (293)
T cd06647 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 170 (293)
T ss_pred eccCCHHHEEEcCCCCEEEccCcceeccccccc-----------------------------------------------
Confidence 999999999999999999999987732211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 171 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ 207 (293)
T cd06647 171 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (293)
T ss_pred -------------------------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHH
Confidence 0001357889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcc-cccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||.......... .+.....+.. .... .+...+|+.+||..+|.+||++.+++.||||....
T Consensus 208 ll~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 208 MVEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHhCCCCCCCCChhhhee-ehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 999 565543322211 1111111111 1112 23455999999999999999999999999999775
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=255.44 Aligned_cols=204 Identities=17% Similarity=0.136 Sum_probs=149.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.... ...++++||| .+++|.+++... .+++.+++.++.||+.||.|||++||+
T Consensus 54 ~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~ 129 (283)
T cd05080 54 KKEINILKTLYHENIVKYKG-CCSEQG-GKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYI 129 (283)
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEecCC-CceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 36777999999999999999 443322 2357999999 999999999543 399999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........ .+
T Consensus 130 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------~~------------- 164 (283)
T cd05080 130 HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE--------------------------------YY------------- 164 (283)
T ss_pred ccccChheEEEcCCCcEEEeecccccccCCcch--------------------------------hh-------------
Confidence 999999999999999999999998743211100 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. .....++..|+|||.+.+..++.++|||||||++||
T Consensus 165 ----------------------~~--------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~e 202 (283)
T cd05080 165 ----------------------RV--------------------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYE 202 (283)
T ss_pred ----------------------cc--------------------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHH
Confidence 00 000134667999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHH--------------HHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC---PFSTGEEKTRT--------------MSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~--------------~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||......... ...+.....++ ..... +...+|+..||.++|++|||+.++++
T Consensus 203 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 203 LLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLP-CPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred HHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCC-CCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999 44322111100 00011111111 11222 34459999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-28 Score=251.78 Aligned_cols=202 Identities=15% Similarity=0.142 Sum_probs=153.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++..++||||+++++ .+.... ..+++||| .+++|.+++.. ....++...++.++.||+.||.|||+.|+
T Consensus 49 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i 124 (261)
T cd05072 49 LEEANLMKTLQHDKLVRLYA-VVTKEE---PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 124 (261)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEcCCC---CcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 36777899999999999998 444433 57999999 89999999943 34458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 125 ~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 159 (261)
T cd05072 125 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT--------------------------------------------- 159 (261)
T ss_pred eccccchhhEEecCCCcEEECCCccceecCCCcee---------------------------------------------
Confidence 99999999999999999999988887432110000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 160 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 195 (261)
T cd05072 160 --------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLY 195 (261)
T ss_pred --------------------------------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHH
Confidence 000023467899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... .....+.+....+..........+|+.+||+.+|++||+++++++
T Consensus 196 ~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 196 EIVTYGKIPYPGMSNS-DVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHccCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9997 55443332 344444443333332222234459999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-28 Score=252.97 Aligned_cols=206 Identities=15% Similarity=0.161 Sum_probs=156.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
....|..+|.+++||||+++++ ++..+. .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 126 (267)
T cd05066 51 DFLSEASIMGQFDHPNIIHLEG-VVTKSK---PVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG 126 (267)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3346778999999999999999 554433 57999999 889999999665556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||.+.........
T Consensus 127 i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------- 162 (267)
T cd05066 127 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------------------- 162 (267)
T ss_pred EeehhhchhcEEECCCCeEEeCCCCcccccccccce--------------------------------------------
Confidence 999999999999999999999999887433111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.. ......++..|+|||.+.+..++.++|+|||||++
T Consensus 163 ------------------------~~-------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l 199 (267)
T cd05066 163 ------------------------AY-------------------TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 199 (267)
T ss_pred ------------------------ee-------------------ecCCCccceeecCHhHhccCccCchhhhHHHHHHH
Confidence 00 00001335689999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.+...++......+...+|+.+||+++|.+||++.++++
T Consensus 200 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 200 WEVMSYGERPYWEMSNQ-DVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HHHhcCCCCCcccCCHH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 99886 55443332 233334443323332223345569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=256.18 Aligned_cols=208 Identities=20% Similarity=0.287 Sum_probs=157.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+...|..+|++++||||+++++ ++.++ ..++++|||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 44 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 119 (283)
T cd05118 44 TALREIKLLKELNHPNIIKLLD-VFRHK---GDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGI 119 (283)
T ss_pred HHHHHHHHHHHhcCCCcchHHH-hhccC---CCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4446778999999999999999 44444 3689999996679999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+...+....
T Consensus 120 ~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~---------------------------------------------- 153 (283)
T cd05118 120 LHRDLKPENLLINTEGVLKLADFGLARSFGSPVR---------------------------------------------- 153 (283)
T ss_pred eecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc----------------------------------------------
Confidence 9999999999999999999999987733221100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......++.+|+|||.+.+. .++.++|||||||++
T Consensus 154 --------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l 189 (283)
T cd05118 154 --------------------------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIF 189 (283)
T ss_pred --------------------------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHH
Confidence 00013568899999999877 589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--C-------------------------cccc-ccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVL--P-------------------------PQLL-LKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~--p-------------------------~~~~-~~~p~~~~Li~~~L~~dP~ 350 (720)
|+|++ ||...+.............. + +... ....+..+||.+||++||.
T Consensus 190 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~ 269 (283)
T cd05118 190 AELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPH 269 (283)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcc
Confidence 99999 55443332211111110000 0 0011 1223445999999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+||++.+++.||||
T Consensus 270 ~Rp~~~~ll~~~~~ 283 (283)
T cd05118 270 KRITAEQALAHPYF 283 (283)
T ss_pred cCcCHHHHhhCCCC
Confidence 99999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=253.06 Aligned_cols=224 Identities=17% Similarity=0.179 Sum_probs=160.5
Q ss_pred hhhhhcccCCCC------CceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGDHL------RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~Hp------nIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.|..+|.++.+. -+|.+.+ +|+-. .+.|+|+|..|.++.++|.. +..+++...++.|.+||+.+|.|||
T Consensus 134 iEi~vLqki~~~DP~g~~rcv~m~~-wFdyr---ghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh 209 (415)
T KOG0671|consen 134 IEIEVLQKINESDPNGKFRCVQMRD-WFDYR---GHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH 209 (415)
T ss_pred HHHHHHHHHHhcCCCCceEEEeeeh-hhhcc---CceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH
Confidence 455567776432 2466666 45444 36799999999999999944 5667999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcc-cCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASC-SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+.+++|-||||+|||+.++...+.-+.+.. ... +. ..-.-+++.|||-|++..
T Consensus 210 ~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~----------------r~----------~ks~~I~vIDFGsAtf~~ 263 (415)
T KOG0671|consen 210 DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI----------------RP----------LKSTAIKVIDFGSATFDH 263 (415)
T ss_pred hcceeecCCChheEEEeccceEEEeccCCcccee----------------cc----------CCCcceEEEecCCcceec
Confidence 999999999999999988777666433221 000 00 000124556777665432
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.. ....+.|..|+|||++.+-+++..+||||+
T Consensus 264 e~------------------------------------------------hs~iVsTRHYRAPEViLgLGwS~pCDvWSi 295 (415)
T KOG0671|consen 264 EH------------------------------------------------HSTIVSTRHYRAPEVILGLGWSQPCDVWSI 295 (415)
T ss_pred cC------------------------------------------------cceeeeccccCCchheeccCcCCccCceee
Confidence 21 012577999999999999999999999999
Q ss_pred hchhhhccccC---CCCc--hHHHHHHHhhcCCCCccccccC--------------------------------------
Q 004989 298 GVLLFELFCPF---STGE--EKTRTMSSLRHRVLPPQLLLKF-------------------------------------- 334 (720)
Q Consensus 298 Gvll~eLltpf---~~~~--~~~~~~~~l~~~~~p~~~~~~~-------------------------------------- 334 (720)
||||+||.+|+ ...+ ++.++|..+.. .+|.......
T Consensus 296 GCIL~ElytG~~LFqtHen~EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~ 374 (415)
T KOG0671|consen 296 GCILVELYTGETLFQTHENLEHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQ 374 (415)
T ss_pred eeEEEEeeccceecccCCcHHHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhcc
Confidence 99999999954 3333 44456665554 2332211110
Q ss_pred -----chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 335 -----PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 335 -----p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
....||+.+||.+||.+|+|+.|+|.||||+...
T Consensus 375 ~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 375 DDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred CcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 0123899999999999999999999999998763
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=255.97 Aligned_cols=208 Identities=17% Similarity=0.236 Sum_probs=161.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+... ...|+++|| .|++|.+++......+++..+..++.||+.||.|||+.||+
T Consensus 63 ~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~ 138 (286)
T cd06614 63 INEILIMKDCKHPNIVDYYD-SYLVG---DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVI 138 (286)
T ss_pred HHHHHHHHHCCCCCeeEEEE-EEEEC---CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36777899999999999999 44444 267999999 88999999966544699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++|+|||.+....... .
T Consensus 139 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---------------------------------~-------------- 171 (286)
T cd06614 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEK---------------------------------S-------------- 171 (286)
T ss_pred eCCCChhhEEEcCCCCEEECccchhhhhccch---------------------------------h--------------
Confidence 99999999999999999999988763211000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+..++.++|||||||++|+
T Consensus 172 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~ 208 (286)
T cd06614 172 -------------------------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIE 208 (286)
T ss_pred -------------------------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHH
Confidence 0001356889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||....... .+..+.....++.. ...++ ...+|+.+||+.+|.+||++.+++.|+||...
T Consensus 209 l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 209 MAEGEPPYLREPPLR-ALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred HHhCCCCCCCCCHHH-HHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 999 555443332 22223222222211 11133 34599999999999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=252.99 Aligned_cols=202 Identities=15% Similarity=0.147 Sum_probs=151.5
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+...|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++.... ..+++..++.
T Consensus 41 ~~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 116 (270)
T cd05047 41 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 116 (270)
T ss_pred HHHHHHHHHHhhccCCCeeeEEE-EEecCC---CceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHH
Confidence 334677788888 8999999999 444433 46999999 8999999995321 2478999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||+|||+.|++||||||+||+++.++.++++|||++......
T Consensus 117 ~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~------------------------------- 165 (270)
T cd05047 117 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY------------------------------- 165 (270)
T ss_pred HHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh-------------------------------
Confidence 9999999999999999999999999999999999999988876211000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
. .......+..|+|||++.+
T Consensus 166 ------~------------------------------------------------------~~~~~~~~~~y~apE~~~~ 185 (270)
T cd05047 166 ------V------------------------------------------------------KKTMGRLPVRWMAIESLNY 185 (270)
T ss_pred ------h------------------------------------------------------hccCCCCccccCChHHHcc
Confidence 0 0000123567999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||..+|.+|||+.++++
T Consensus 186 ~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 186 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 889999999999999999996 66443322 333333333222222223345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=252.62 Aligned_cols=204 Identities=17% Similarity=0.231 Sum_probs=156.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..++..++||||+++++. +..+. ..+++||| .|++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 48 ~~~~e~~~l~~~~h~~i~~~~~~-~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 123 (267)
T cd08229 48 DCIKEIDLLKQLNHPNVIKYYAS-FIEDN---ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH 123 (267)
T ss_pred HHHHHHHHHHHccCCchhhhhhe-eEeCC---eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33467889999999999999994 43332 57999999 88999999842 2345899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++|++|+||||+||+++.++.++++|||.+........
T Consensus 124 ~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------ 161 (267)
T cd08229 124 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 161 (267)
T ss_pred HCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc------------------------------------------
Confidence 99999999999999999999999999887633211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......|+..|+|||.+.+..++.++||||||
T Consensus 162 ------------------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG 193 (267)
T cd08229 162 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 193 (267)
T ss_pred ------------------------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHH
Confidence 00013578899999999888899999999999
Q ss_pred chhhhccc---cCCCCch-HHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGEE-KTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~-~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||..... .......+.....++...... +...+|+.+||+.+|.+|||+.+|++
T Consensus 194 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 194 CLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 99999999 5543322 223333344333443333333 34559999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-28 Score=249.46 Aligned_cols=204 Identities=18% Similarity=0.210 Sum_probs=153.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++++++||||+++++ ++.... ..+++||| .|++|.+++.+....+++..++.++.|++.||.|||++|+
T Consensus 39 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i 114 (251)
T cd05041 39 FLQEAEILKQYDHPNIVKLIG-VCVQKQ---PIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNC 114 (251)
T ss_pred HHHHHHHHHhCCCCCeEEEEE-EEecCC---CeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 346677899999999999999 554443 57999999 8999999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... +.
T Consensus 115 ~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------~~----------- 149 (251)
T cd05041 115 IHRDLAARNCLVGENNVLKISDFGMSREEEGGI----------------------------------YT----------- 149 (251)
T ss_pred ehhhcCcceEEEcCCCcEEEeeccccccccCCc----------------------------------ce-----------
Confidence 999999999999999999999998874321100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......++..|+|||.+.+..++.++|||||||++|
T Consensus 150 -------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~ 186 (251)
T cd05041 150 -------------------------------------------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLW 186 (251)
T ss_pred -------------------------------------------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHH
Confidence 0000012355699999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+......+...+|+.+||..+|.+|||+.|+++
T Consensus 187 ~l~t~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 187 ETFSLGDTPYPGMSNQ-QTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred HHHhccCCCCccCCHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 9997 45444332 223333322211111122234559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=255.06 Aligned_cols=206 Identities=19% Similarity=0.264 Sum_probs=160.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ .+..+. .+|+|||| .+++|.+++... .+++..+..++.||+.||.|||+.|+
T Consensus 49 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (277)
T cd06641 49 IQQEITVLSQCDSPYVTKYYG-SYLKDT---KLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK 122 (277)
T ss_pred HHHHHHHHHhcCCCCEeEEEE-EEEeCC---eEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCCe
Confidence 336777899999999999999 454443 57999999 889999998543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+...... ++
T Consensus 123 ~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~----------------------------------~~------------ 156 (277)
T cd06641 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT----------------------------------QI------------ 156 (277)
T ss_pred ecCCCCHHhEEECCCCCEEEeecccceecccc----------------------------------hh------------
Confidence 99999999999999999999999876321100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|+.+|+|||.+.+..++.++|+|||||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~ 192 (277)
T cd06641 157 --------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAI 192 (277)
T ss_pred --------------------------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHH
Confidence 000135788999999998888899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||...... .....+... .++.+....+ ...+++.+||+.+|.+||++.++++||||...
T Consensus 193 ~l~~g~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 193 ELAKGEPPHSELHPM-KVLFLIPKN-NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHHcCCCCCCccchH-HHHHHHhcC-CCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 9999 44433322 222223222 2233333333 45599999999999999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-28 Score=251.04 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=154.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.+++||||+++++ ++.... .+|++||| .+++|.+++... +..+++..+..++.||+.||.|||+.||+
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 125 (261)
T cd05068 50 AEAQIMKKLRHPKLIQLYA-VCTLEE---PIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYI 125 (261)
T ss_pred HHHHHHHHCCCCCccceeE-EEecCC---CeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5777999999999999999 554443 57999999 799999999543 34689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+...+..... ..
T Consensus 126 H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------~~-------------- 161 (261)
T cd05068 126 HRDLAARNVLVGENNICKVADFGLARVIKEDIYE------------------------------AR-------------- 161 (261)
T ss_pred eccCCcceEEEcCCCCEEECCcceEEEccCCccc------------------------------cc--------------
Confidence 9999999999999999999999887443211000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.+ ...+..|+|||.+.+..++.++|||||||++||
T Consensus 162 --------------------------~~-------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 196 (261)
T cd05068 162 --------------------------EG-------------------AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTE 196 (261)
T ss_pred --------------------------CC-------------------CcCceeccCccccccCCCCchhhHHHHHHHHHH
Confidence 00 122457999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||.+.... .....+......+..........+++.+||+.+|.+||++.++++
T Consensus 197 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 197 IVTYGRMPYPGMTNA-EVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 998 56554433 333444333222222223345569999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-28 Score=253.85 Aligned_cols=208 Identities=15% Similarity=0.192 Sum_probs=153.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++..+. ..+++||| .++.|..++. ....+++.+++.++.||+.||.|||++|
T Consensus 46 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 46 TALREVKVLRQLRHENIVNLKE-AFRRKG---RLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred HHHHHHHHHHhcCCCCeeehhh-eEEECC---EEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3346777999999999999999 444432 57999999 5544444443 3345999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||.+........
T Consensus 121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--------------------------------------------- 155 (288)
T cd07833 121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPA--------------------------------------------- 155 (288)
T ss_pred eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
.......++.+|+|||++.+. .++.++|||||||+
T Consensus 156 --------------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~ 191 (288)
T cd07833 156 --------------------------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCI 191 (288)
T ss_pred --------------------------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHH
Confidence 000113578899999999888 68999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhh--cC------------------CCCc---------ccccc-CchHHHHHHHcCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLR--HR------------------VLPP---------QLLLK-FPKEASFCLWLLHP 347 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~--~~------------------~~p~---------~~~~~-~p~~~~Li~~~L~~ 347 (720)
+|+|++ ||.............. .. .+++ .+... .++..+|+.+||..
T Consensus 192 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 271 (288)
T cd07833 192 MAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRM 271 (288)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhcc
Confidence 999999 4544333221111100 00 0000 01111 23455999999999
Q ss_pred CCCCCCChHHHHcCccc
Q 004989 348 EPSGRPKMGELLQSEFL 364 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~ 364 (720)
+|++||++.+++.||||
T Consensus 272 ~p~~Rps~~~il~~~~f 288 (288)
T cd07833 272 DPKERLTCDELLQHPYF 288 (288)
T ss_pred CchhcccHHHHhcCCCC
Confidence 99999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=256.73 Aligned_cols=205 Identities=20% Similarity=0.267 Sum_probs=151.8
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++..+. .+|++||| .+++|.+++... ..+++..++.++.||+.||.|||+.||+
T Consensus 48 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 122 (286)
T cd07846 48 MREIRMLKQLRHENLVNLIE-VFRRKK---RLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNII 122 (286)
T ss_pred HHHHHHHHhcCCcchhhHHH-hcccCC---eEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36777899999999999999 444433 67999999 777888776443 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||++++++.++|+|||++....... .
T Consensus 123 h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--------------------------------~--------------- 155 (286)
T cd07846 123 HRDIKPENILVSQSGVVKLCDFGFARTLAAPG--------------------------------E--------------- 155 (286)
T ss_pred ccCCCHHHEEECCCCcEEEEeeeeeeeccCCc--------------------------------c---------------
Confidence 99999999999999999999998873221100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
......++.+|+|||.+.+.. ++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 192 (286)
T cd07846 156 -------------------------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVT 192 (286)
T ss_pred -------------------------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHH
Confidence 000135788999999987644 788999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh--c------------------CCCCc---------cccccCchHHHHHHHcCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLR--H------------------RVLPP---------QLLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~--~------------------~~~p~---------~~~~~~p~~~~Li~~~L~~dP~ 350 (720)
||++ ||.............. . ...+. ......+...+|+.+||+++|.
T Consensus 193 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 272 (286)
T cd07846 193 EMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPD 272 (286)
T ss_pred HHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcc
Confidence 9999 4443322111111000 0 00000 0111223455999999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+||++.++++||||
T Consensus 273 ~Rp~~~~il~~~~~ 286 (286)
T cd07846 273 DRPSSSQLLHHEFF 286 (286)
T ss_pred cchhHHHHhcCCCC
Confidence 99999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-28 Score=255.13 Aligned_cols=203 Identities=16% Similarity=0.159 Sum_probs=152.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------CCCCHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----------~~l~~~~~~~i~~QIl~a 133 (720)
.+|..++.+++||||+++++ ++..+. .++++||| .+++|.++|.... ..+++..++.++.||+.|
T Consensus 67 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 142 (296)
T cd05051 67 LKEVKILSRLSDPNIARLLG-VCTVDP---PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASG 142 (296)
T ss_pred HHHHHHHHhcCCCCEeEEEE-EEecCC---CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHH
Confidence 36778999999999999999 554442 57999999 8899999995433 258999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||+.||+||||||+||+++.++.++|+|||.+....... .+.
T Consensus 143 l~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~~-- 187 (296)
T cd05051 143 MRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSD---------------------------------YYR-- 187 (296)
T ss_pred HHHHHHcCccccccchhceeecCCCceEEccccceeecccCc---------------------------------cee--
Confidence 999999999999999999999999999999998874321110 000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
......+++.|+|||.+.+..++.++|
T Consensus 188 -----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~D 214 (296)
T cd05051 188 -----------------------------------------------------VQGRAPLPIRWMAWESVLLGKFTTKSD 214 (296)
T ss_pred -----------------------------------------------------ecCcCCCCceecCHHHhhcCCCCccch
Confidence 000134578899999998888999999
Q ss_pred chhhhchhhhccc-----cCCCCchHHHHHHHhhcC-------CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 294 IYRLGVLLFELFC-----PFSTGEEKTRTMSSLRHR-------VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt-----pf~~~~~~~~~~~~l~~~-------~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||...... ..+..+... ...+......+...+|+.+||..||.+|||+.|+++
T Consensus 215 v~slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 215 VWAFGVTLWEILTLCREQPYEHLTDQ-QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred hhhhHHHHHHHHhcCCCCCCCCcChH-HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 9999999999987 44433222 222222211 111111112244569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-28 Score=257.51 Aligned_cols=205 Identities=16% Similarity=0.172 Sum_probs=155.3
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~ 125 (720)
+..+|..++..+ +||||+++++ ++.... .+|++||| .+++|.++|.+. ...++...++.
T Consensus 66 ~~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (304)
T cd05101 66 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVS 141 (304)
T ss_pred HHHHHHHHHHhhccCCCchheeE-EEecCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHH
Confidence 445777888888 8999999999 554443 57999999 889999999542 12478889999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+||+++.++.++|+|||.++.......
T Consensus 142 ~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~----------------------------- 192 (304)
T cd05101 142 CTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY----------------------------- 192 (304)
T ss_pred HHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccc-----------------------------
Confidence 999999999999999999999999999999999999999988743321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.. ......+++.|+|||++.+
T Consensus 193 ----~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 213 (304)
T cd05101 193 ----YK-------------------------------------------------------KTTNGRLPVKWMAPEALFD 213 (304)
T ss_pred ----cc-------------------------------------------------------cccCCCCCceeeCchhhcc
Confidence 00 0000235678999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|+|++ ||... ........+.....+...........+|+.+||+++|.+||++.|+++
T Consensus 214 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 214 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCcccC-CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 889999999999999999997 44433 233444444443322222223344559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=268.73 Aligned_cols=204 Identities=17% Similarity=0.184 Sum_probs=154.7
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------------
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------------------------- 114 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------------------------- 114 (720)
..+|..+|+++. |||||++++ ++.... .+|+|||| .+++|.++|.+.
T Consensus 87 ~~~Ei~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (400)
T cd05105 87 LMSELKIMTHLGPHLNIVNLLG-ACTKSG---PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADES 162 (400)
T ss_pred HHHHHHHHHhcCCCCCeeeEEE-EEccCC---ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCccccc
Confidence 346788999996 999999999 554433 57999999 999999998431
Q ss_pred --------------------------------------------------------------------CCCCCHHHHHHH
Q 004989 115 --------------------------------------------------------------------KRSVDVYECLHI 126 (720)
Q Consensus 115 --------------------------------------------------------------------~~~l~~~~~~~i 126 (720)
...+++.++..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 242 (400)
T cd05105 163 TRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSF 242 (400)
T ss_pred ccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHH
Confidence 123778889999
Q ss_pred HHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccc
Q 004989 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 243 ~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~------------------------------ 292 (400)
T cd05105 243 TYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN------------------------------ 292 (400)
T ss_pred HHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc------------------------------
Confidence 99999999999999999999999999999999999999998743211100
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC
Q 004989 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
. .......+++.|+|||.+.+.
T Consensus 293 ---~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~ 314 (400)
T cd05105 293 ---Y-------------------------------------------------------VSKGSTFLPVKWMAPESIFDN 314 (400)
T ss_pred ---c-------------------------------------------------------cccCCcCCCcceEChhhhcCC
Confidence 0 000012467889999999888
Q ss_pred CCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||............+.....++ ....++ ...+|+.+||..||++||++.++.+
T Consensus 315 ~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 315 LYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMA-KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCC-CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 89999999999999999986 5554433333344444443332 223334 4569999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-28 Score=252.60 Aligned_cols=203 Identities=19% Similarity=0.170 Sum_probs=156.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ ++.+. ..|++||| .+++|.+++.+....+++..++.++.||+.||+|||+.|
T Consensus 53 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 127 (270)
T cd05056 53 KFLQEAYIMRQFDHPHIVKLIG-VITEN----PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR 127 (270)
T ss_pred HHHHHHHHHHhCCCCchhceeE-EEcCC----CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446788999999999999999 55443 46899999 899999999665556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||||+||+++.++.++++|||.+....... +
T Consensus 128 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------~----------- 162 (270)
T cd05056 128 FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES----------------------------------Y----------- 162 (270)
T ss_pred eeccccChheEEEecCCCeEEccCceeeeccccc----------------------------------c-----------
Confidence 9999999999999999999999988773221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||.+....++.++|||||||++
T Consensus 163 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 198 (270)
T cd05056 163 -------------------------Y-------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 198 (270)
T ss_pred -------------------------e-------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHH
Confidence 0 00001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||.++|.+|||+.+++.
T Consensus 199 ~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 199 WEILMLGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HHHHHcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99886 66655443 233344443333322223345569999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-28 Score=252.48 Aligned_cols=202 Identities=13% Similarity=0.110 Sum_probs=153.8
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CCCCCHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+|..+|..++||||+++++ ++... ...|++||| .+++|.+++... ...+++..++.++.||+.||.
T Consensus 58 ~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 133 (277)
T cd05032 58 NEASVMKEFNCHHVVRLLG-VVSTG---QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133 (277)
T ss_pred HHHHHHHhCCCCceeEEEE-EEcCC---CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHH
Confidence 6777899999999999999 44444 357999999 889999999432 123688899999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||+.||+||||||+||+++.++.++|+|||.++..... ++ .
T Consensus 134 ~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~----------------------------------~~--~-- 175 (277)
T cd05032 134 YLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYET----------------------------------DY--Y-- 175 (277)
T ss_pred HHHhCCccccccChheEEEcCCCCEEECCcccchhhccC----------------------------------cc--c--
Confidence 999999999999999999999999999998887432111 00 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.......++..|+|||.+.+..++.++|||
T Consensus 176 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 205 (277)
T cd05032 176 --------------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTKSDVW 205 (277)
T ss_pred --------------------------------------------------ccCCCCCccccccCHHHHhcCCCCcccchH
Confidence 000012457789999999888899999999
Q ss_pred hhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..... ......+.....++......+...+|+.+||.++|++|||+.++++
T Consensus 206 slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 206 SFGVVLWEMATLAEQPYQGLSN-EEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHHHHHHhhccCCCCCccCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999997 5554333 2344444433332222222344459999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-28 Score=249.09 Aligned_cols=197 Identities=17% Similarity=0.136 Sum_probs=150.7
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ ++... ..+++||| .+++|.+++... ...+++..++.++.||+.||.|||+.|+
T Consensus 47 ~~e~~~l~~~~~~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~ 121 (254)
T cd05083 47 LEETAVMTKLHHKNLVRLLG-VILHN----GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKL 121 (254)
T ss_pred HHHHHHHHhCCCCCcCeEEE-EEcCC----CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 36777899999999999999 44332 25899999 889999999543 3358999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+...... .
T Consensus 122 ~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-------------------------------------~---------- 154 (254)
T cd05083 122 VHRDLAARNILVSEDGVAKVSDFGLARVGSMG-------------------------------------V---------- 154 (254)
T ss_pred eccccCcceEEEcCCCcEEECCCccceecccc-------------------------------------C----------
Confidence 99999999999999999999998876321000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+..|+|||.+.+..++.++|||||||++|
T Consensus 155 ----------------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ 188 (254)
T cd05083 155 ----------------------------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLW 188 (254)
T ss_pred ----------------------------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHH
Confidence 0012245799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+|+.+||..+|..||++.+++.
T Consensus 189 el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 189 EVFSYGRAPYPKMSLK-EVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHhCCCCCCccCCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9986 55544332 233333333222222222344559999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-28 Score=250.68 Aligned_cols=202 Identities=13% Similarity=0.118 Sum_probs=153.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++.+++||||+++++ ++... ..|++||| .+++|.+++.. ....+++..++.++.||+.||.|||+.|
T Consensus 48 ~~~E~~~l~~l~~~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05070 48 FLEEAQIMKKLRHDKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 122 (260)
T ss_pred HHHHHHHHHhcCCCceEEEEe-EECCC----CcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346777999999999999998 44332 36899999 88999999954 3345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 123 i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------- 158 (260)
T cd05070 123 YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-------------------------------------------- 158 (260)
T ss_pred cccCCCccceEEEeCCceEEeCCceeeeeccCcccc--------------------------------------------
Confidence 999999999999999999999988887332111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05070 159 ---------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193 (260)
T ss_pred ---------------------------------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHH
Confidence 00002346679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ......+.....++..........+|+.+||.++|++|||+++++.
T Consensus 194 ~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 194 TELVTKGRVPYPGMNN-REVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHHHhcCCCCCCCCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99997 4544333 2344444443333322223344559999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-28 Score=251.28 Aligned_cols=205 Identities=13% Similarity=0.153 Sum_probs=157.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++.+++||||+++++ ++.... ..|++||| .+++|.+++......+++..+..++.|++.||+|||+.|+
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 128 (268)
T cd05063 53 FLSEASIMGQFSHHNIIRLEG-VVTKFK---PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY 128 (268)
T ss_pred HHHHHHHHhcCCCCCeeEEEE-EEccCC---CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777899999999999999 554443 57999999 8899999996655668999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++++|||++........ ..+
T Consensus 129 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-------------------------------~~~------------ 165 (268)
T cd05063 129 VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE-------------------------------GTY------------ 165 (268)
T ss_pred eccccchhhEEEcCCCcEEECCCccceecccccc-------------------------------cce------------
Confidence 9999999999999999999999988743211000 000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......++.|+|||++.+..++.++|||||||++|
T Consensus 166 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ 201 (268)
T cd05063 166 --------------------------------------------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMW 201 (268)
T ss_pred --------------------------------------------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHH
Confidence 000012356799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||..... ......+......+......+...+|+.+||..+|.+||++.++++
T Consensus 202 ell~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 202 EVMSFGERPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred HHHhCCCCCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9886 5544333 2344444444333333333445569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=261.75 Aligned_cols=217 Identities=18% Similarity=0.197 Sum_probs=158.0
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+++++ +||||+++++ ++... ....+|+||||.+++|.+++... .+++..++.++.||+.||.|||+.||
T Consensus 53 ~~~E~~~l~~l~~h~ni~~~~~-~~~~~-~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i 128 (337)
T cd07852 53 TFREIMFLQELGDHPNIVKLLN-VIKAE-NDKDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNV 128 (337)
T ss_pred hhHHHHHHHHhcCCCCccceee-eeccC-CCceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 33678899999 9999999999 44332 22357999999667999998554 58999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......... .
T Consensus 129 ~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~--------------------------------~------------ 164 (337)
T cd07852 129 IHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN--------------------------------P------------ 164 (337)
T ss_pred ecCCCCHHHEEEcCCCcEEEeeccchhcccccccc--------------------------------c------------
Confidence 99999999999999999999999987432111000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
..+ ......||++|+|||.+.+. .++.++|||||||++
T Consensus 165 ----------------------------------------~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l 203 (337)
T cd07852 165 ----------------------------------------ENP-VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCIL 203 (337)
T ss_pred ----------------------------------------cCc-chhcccccccccCceeeeccccccccchHHHHHHHH
Confidence 000 00114679999999988654 478999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHh--------------------------hcCC--CCccccc-cCchHHHHHHHcCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSL--------------------------RHRV--LPPQLLL-KFPKEASFCLWLLHPEP 349 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l--------------------------~~~~--~p~~~~~-~~p~~~~Li~~~L~~dP 349 (720)
|+|++ ||............. .... ....... ..+...+||.+||+.+|
T Consensus 204 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P 283 (337)
T cd07852 204 GEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNP 283 (337)
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCc
Confidence 99999 554432221111000 0000 0011111 23344599999999999
Q ss_pred CCCCChHHHHcCcccCCCcc
Q 004989 350 SGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||+.++++||||.....
T Consensus 284 ~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 284 NKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred ccccCHHHHhhChhhhhhcc
Confidence 99999999999999988644
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=255.80 Aligned_cols=209 Identities=17% Similarity=0.187 Sum_probs=154.3
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCce
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 143 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIv 143 (720)
+|..++.. .+||||+++++ .+.++. .+|++|||.+++|..++......+++..+..++.||+.||.|||+ .||+
T Consensus 62 ~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~ 137 (296)
T cd06618 62 MDLDVVLKSHDCPYIVKCYG-YFITDS---DVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVI 137 (296)
T ss_pred HHHHHHHhccCCCchHhhhe-eeecCC---eEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEe
Confidence 34434444 45999999999 444443 579999997778888875544569999999999999999999997 6999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+.......
T Consensus 138 H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~------------------------------------------------ 169 (296)
T cd06618 138 HRDVKPSNILLDASGNVKLCDFGISGRLVDSK------------------------------------------------ 169 (296)
T ss_pred cCCCcHHHEEEcCCCCEEECccccchhccCCC------------------------------------------------
Confidence 99999999999999999999988763221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----CCccccchhhhc
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGV 299 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGv 299 (720)
......+++.|+|||.+.+.. ++.++|||||||
T Consensus 170 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~ 206 (296)
T cd06618 170 -------------------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGI 206 (296)
T ss_pred -------------------------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHH
Confidence 000124678899999997653 789999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccc--cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|+|++ ||............+.....+... ........+|+.+||+.||.+||++.++++||||.....
T Consensus 207 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 207 SLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred HHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 9999999 554433322333333222221111 112334569999999999999999999999999987633
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-29 Score=268.05 Aligned_cols=224 Identities=16% Similarity=0.201 Sum_probs=182.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..||...+.|.||++|. .|.+.. ++|+.||- .||.|...|+..+. +++..++.|+..+++|++|||++|||.
T Consensus 469 sEr~Im~~~~s~fIvrLYr-Tfrd~k---yvYmLmEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH~k~iIY 543 (732)
T KOG0614|consen 469 SERNIMMECRSDFIVRLYR-TFRDSK---YVYMLMEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLHRKGIIY 543 (732)
T ss_pred hHHHHHHhcCchHHHHHHH-Hhccch---hhhhhHHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHHhcCcee
Confidence 4555788888999999999 454443 67999999 99999999966655 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|.+++.+|.+||+|||+|+..|...
T Consensus 544 RDLKPENllLd~~Gy~KLVDFGFAKki~~g~------------------------------------------------- 574 (732)
T KOG0614|consen 544 RDLKPENLLLDNRGYLKLVDFGFAKKIGSGR------------------------------------------------- 574 (732)
T ss_pred ccCChhheeeccCCceEEeehhhHHHhccCC-------------------------------------------------
Confidence 9999999999999999999999885543321
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
+.-..+|||.|.|||++.+...+.++|.||||+++|||
T Consensus 575 ------------------------------------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~EL 612 (732)
T KOG0614|consen 575 ------------------------------------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYEL 612 (732)
T ss_pred ------------------------------------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHH
Confidence 01126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHHH
Q 004989 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEER 374 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e~ 374 (720)
|+ ||.+.++. .++..|.+++-.-.++...++.+ +||+++...+|.+|. .+.+|-.|-||... +..+..+
T Consensus 613 L~G~pPFs~~dpm-ktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~ 691 (732)
T KOG0614|consen 613 LTGSPPFSGVDPM-KTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSR 691 (732)
T ss_pred HcCCCCCCCCchH-HHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhc
Confidence 99 77766554 56666666665555555666665 999999999999997 48999999999987 4455555
Q ss_pred HHHHHHhhhhhh
Q 004989 375 EAAIELREQIDE 386 (720)
Q Consensus 375 ~~~~~~~e~~~~ 386 (720)
...+++.....+
T Consensus 692 ~L~pPi~~~va~ 703 (732)
T KOG0614|consen 692 TLPPPIIPSVAN 703 (732)
T ss_pred cCCCCccccCCC
Confidence 555555554444
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-28 Score=249.00 Aligned_cols=205 Identities=20% Similarity=0.253 Sum_probs=161.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..++++++||||+++++.++. . ...|++||| .+++|.+++.+ ....+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~-~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh 120 (256)
T cd08530 45 DAVNEIRILASVNHPNIISYKEAFLD-G---NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120 (256)
T ss_pred HHHHHHHHHHhCCCCCchhhhhhhcc-C---CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 44477889999999999999994443 3 368999999 89999999844 2345899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.|++|+||+|+||+++.++.++|+|||.+...... +
T Consensus 121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------------------------~-------- 157 (256)
T cd08530 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------------------------M-------- 157 (256)
T ss_pred hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------------------------C--------
Confidence 999999999999999999999999998877322110 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....|++.|+|||.+.+..++.++|+||||
T Consensus 158 -------------------------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG 188 (256)
T cd08530 158 -------------------------------------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLG 188 (256)
T ss_pred -------------------------------------------------cccccCCccccCHHHHCCCCCCchhhHHHHH
Confidence 0002468899999999888899999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+++|+|++ ||...... .....+.....++..........+++.+||+.+|.+||++.++++||++
T Consensus 189 ~~~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 189 CLLYEMATFAPPFEARSMQ-DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 99999998 56554433 3333344444444333333455699999999999999999999999985
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=255.39 Aligned_cols=204 Identities=15% Similarity=0.136 Sum_probs=155.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------CCCCCHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------KRSVDVY 121 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------------~~~l~~~ 121 (720)
..+|..++++++||||+++++ ++..+. ..+++||| .+++|.+++... ...+++.
T Consensus 55 ~~~ei~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (288)
T cd05050 55 FQREAALMAEFDHPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCT 130 (288)
T ss_pred HHHHHHHHHhcCCCchheEEE-EEcCCC---ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHH
Confidence 346788999999999999999 555543 56999999 889999999532 1247888
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.++.||+.||.|||++|++||||||+||+++.++.++++|||.+........
T Consensus 131 ~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------- 185 (288)
T cd05050 131 EQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY------------------------- 185 (288)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcc-------------------------
Confidence 9999999999999999999999999999999999999999999988743211100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
+ . .......+..|+|||
T Consensus 186 --------~---~----------------------------------------------------~~~~~~~~~~y~aPE 202 (288)
T cd05050 186 --------Y---K----------------------------------------------------ASENDAIPIRWMPPE 202 (288)
T ss_pred --------c---c----------------------------------------------------ccCCCccChhhcCHH
Confidence 0 0 000012356799999
Q ss_pred cccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHH
Q 004989 282 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 357 (720)
Q Consensus 282 ~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~e 357 (720)
.+.+..++.++|||||||++|||++ ||.+.... .....+.....++......+...+|+.+||..+|.+|||+.|
T Consensus 203 ~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e 281 (288)
T cd05050 203 SIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFAS 281 (288)
T ss_pred HHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 9988889999999999999999986 55544333 344444444433322223345669999999999999999999
Q ss_pred HHc
Q 004989 358 LLQ 360 (720)
Q Consensus 358 iL~ 360 (720)
+++
T Consensus 282 l~~ 284 (288)
T cd05050 282 INR 284 (288)
T ss_pred HHH
Confidence 875
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=252.17 Aligned_cols=203 Identities=19% Similarity=0.193 Sum_probs=149.1
Q ss_pred cccCCCCCceecccceeecCC-CCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 004989 71 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 71 L~~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
+..++||||+++++.+...+. ....++++|||.+++|.+++... ...+++..++.++.||+.||.|||+.|++|+||+
T Consensus 55 l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~ 134 (287)
T cd07838 55 LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLK 134 (287)
T ss_pred hhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence 445679999999994443321 22348999999667899998543 3358999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccC
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+||+++.++.++|+|||.+........
T Consensus 135 ~~nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 162 (287)
T cd07838 135 PQNILVTSDGQVKIADFGLARIYSFEMA---------------------------------------------------- 162 (287)
T ss_pred hhhEEEccCCCEEEeccCcceeccCCcc----------------------------------------------------
Confidence 9999999999999999988733211100
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc--
Q 004989 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
.....++..|+|||.+.+..++.++|||||||++|||++
T Consensus 163 ---------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~ 203 (287)
T cd07838 163 ---------------------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRR 203 (287)
T ss_pred ---------------------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCC
Confidence 000246888999999998889999999999999999999
Q ss_pred -cCCCCchHHHHHHHhhcCC-----------------CCc----cc----cccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 307 -PFSTGEEKTRTMSSLRHRV-----------------LPP----QL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~~-----------------~p~----~~----~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||............+.... ++. .+ ....+...+||.+||..||.+||++.++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 204 PLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 4444332221111111000 000 00 011233458999999999999999999999
Q ss_pred Cccc
Q 004989 361 SEFL 364 (720)
Q Consensus 361 hp~~ 364 (720)
||||
T Consensus 284 ~~~~ 287 (287)
T cd07838 284 HPYF 287 (287)
T ss_pred CcCC
Confidence 9997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=249.12 Aligned_cols=204 Identities=20% Similarity=0.256 Sum_probs=158.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++|+||+++++ .+.... .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 48 ~~~~ei~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 123 (267)
T cd08224 48 DCLKEIDLLKQLDHPNVIKYLA-SFIENN---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH 123 (267)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-eeecCC---eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 4447788999999999999999 444432 57999999 88999999842 3445899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+||||||+||+++.++.++++|||.+........
T Consensus 124 ~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------ 161 (267)
T cd08224 124 SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 161 (267)
T ss_pred hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc------------------------------------------
Confidence 99999999999999999999999999887632211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......|++.|+|||.+.+..++.++||||||
T Consensus 162 ------------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG 193 (267)
T cd08224 162 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 193 (267)
T ss_pred ------------------------------------------------ccceecCCccccCHHHhccCCCCchhcHHHHH
Confidence 00013568899999999888899999999999
Q ss_pred chhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||.... ........+..+..++......+ ...+++.+||.++|++|||+.+|++
T Consensus 194 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 194 CLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999 554332 22334445555555544432333 4559999999999999999999885
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=256.69 Aligned_cols=204 Identities=16% Similarity=0.170 Sum_probs=152.7
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHH
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i 126 (720)
...|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++... ...+++.++..+
T Consensus 64 ~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 139 (314)
T cd05099 64 LISEMELMKLIGKHKNIINLLG-VCTQEG---PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSC 139 (314)
T ss_pred HHHHHHHHHhccCCCCeeeEEE-EEccCC---ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHH
Confidence 34667788888 6999999999 554432 57999999 899999999432 134889999999
Q ss_pred HHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccc
Q 004989 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||++||+||||||+|||++.++.+||+|||.++.......
T Consensus 140 ~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------ 189 (314)
T cd05099 140 AYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDY------------------------------ 189 (314)
T ss_pred HHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccccccccc------------------------------
Confidence 99999999999999999999999999999999999999988743211000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC
Q 004989 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
. . ......++..|+|||++.+.
T Consensus 190 ---~--------------------------------------------------~-----~~~~~~~~~~y~aPE~~~~~ 211 (314)
T cd05099 190 ---Y--------------------------------------------------K-----KTSNGRLPVKWMAPEALFDR 211 (314)
T ss_pred ---c--------------------------------------------------c-----ccccCCCCccccCHHHHccC
Confidence 0 0 00001235679999999888
Q ss_pred CCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||..... ......+.....+........+..+|+.+||..+|++|||+.++++
T Consensus 212 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 212 VYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-EELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred CcCccchhhHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 89999999999999999998 4544332 2334444433322222222335569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-28 Score=250.01 Aligned_cols=201 Identities=13% Similarity=0.130 Sum_probs=152.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+++.++||||+++++ ++... ..+++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 49 ~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 123 (260)
T cd05069 49 LQEAQIMKKLRHDKLVPLYA-VVSEE----PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY 123 (260)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEcCC----CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 36777999999999999998 44322 46899999 88899999954 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||++++++.++|+|||.+.........
T Consensus 124 ~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 158 (260)
T cd05069 124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT--------------------------------------------- 158 (260)
T ss_pred eecccCcceEEEcCCCeEEECCCccceEccCCccc---------------------------------------------
Confidence 99999999999999999999998877332111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05069 159 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194 (260)
T ss_pred --------------------------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHH
Confidence 000023467799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++..........+|+.+||.+||.+||+++++++
T Consensus 195 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 195 ELVTKGRVPYPGMVNR-EVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9997 55544332 334444443322222222234459999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-28 Score=250.37 Aligned_cols=202 Identities=14% Similarity=0.110 Sum_probs=153.9
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++.+++||||+++++ .+... ..|++||| .+++|.+++.+ .+..+++..++.++.||+.||.|||+.|
T Consensus 48 ~~~E~~~l~~l~~~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 122 (262)
T cd05071 48 FLQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 122 (262)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EECCC----CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346777999999999999998 44332 46899999 88999999954 3345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+....... +.
T Consensus 123 i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~----------------------------------~~---------- 158 (262)
T cd05071 123 YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------YT---------- 158 (262)
T ss_pred ccccccCcccEEEcCCCcEEeccCCceeeccccc----------------------------------cc----------
Confidence 9999999999999999999999998874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||++.+..++.++|||||||++
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l 193 (262)
T cd05071 159 ---------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193 (262)
T ss_pred ---------------------------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHH
Confidence 00002356789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ..+..+......+......+...+|+.+||+++|++||++.++++
T Consensus 194 ~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 194 TELTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHcCCCCCCCCCChH-HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 99998 56544333 333333333222222223334559999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-28 Score=250.82 Aligned_cols=208 Identities=14% Similarity=0.113 Sum_probs=156.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+++.++||||+++++.++.... .....+++||| .+++|..++.. ....+++..++.++.||+.||.
T Consensus 48 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~ 127 (273)
T cd05035 48 FLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127 (273)
T ss_pred HHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHH
Confidence 3467778999999999999994443321 22347999999 99999998832 1235899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+||++++++.+||+|||.++....... +
T Consensus 128 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------~----- 169 (273)
T cd05035 128 YLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY---------------------------------Y----- 169 (273)
T ss_pred HHHhCCeeccccchheEEECCCCeEEECCccceeecccccc---------------------------------c-----
Confidence 99999999999999999999999999999988743211100 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
. ......++..|+|||.+.+..++.++|||
T Consensus 170 ------------------------------~--------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~ 199 (273)
T cd05035 170 ------------------------------R--------------------QGRIAKMPVKWIAIESLADRVYTSKSDVW 199 (273)
T ss_pred ------------------------------c--------------------ccccccCCccccCHhhcccCCCCcccchH
Confidence 0 00001236679999999888899999999
Q ss_pred hhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..... ......+.....+.......+...+++.+||..||.+|||+.|++.
T Consensus 200 SlG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 200 AFGVTMWEIATRGQTPYPGVEN-HEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred HHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999997 4544333 3444444444433333334455669999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-28 Score=248.98 Aligned_cols=202 Identities=15% Similarity=0.189 Sum_probs=153.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.|++.||.|||+.|++
T Consensus 47 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~ 122 (256)
T cd05112 47 IEEAQVMMKLSHPKLVQLYG-VCTERS---PICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVI 122 (256)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEccCC---ceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777999999999999999 444433 57999999 89999999965555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+...+.....
T Consensus 123 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------- 156 (256)
T cd05112 123 HRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT---------------------------------------------- 156 (256)
T ss_pred ccccccceEEEcCCCeEEECCCcceeecccCccc----------------------------------------------
Confidence 9999999999999999999999877432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~e 193 (256)
T cd05112 157 -------------------------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWE 193 (256)
T ss_pred -------------------------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHH
Confidence 0000134678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||..... ......+.....+...........+|+.+||+.+|++|||+.++++
T Consensus 194 l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 194 VFSEGKTPYENRSN-SEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred HHcCCCCCCCcCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 997 5544332 2334444432221111112234459999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=254.07 Aligned_cols=211 Identities=18% Similarity=0.210 Sum_probs=154.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCC-------CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEA-------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~-------~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
..+|..++.+++||||+++++ ++.+.. ....+|+++||.+++|.+++......+++..++.++.||+.||.|
T Consensus 53 ~~~e~~~~~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~ 131 (302)
T cd07864 53 AIREIKILRQLNHRNIVNLKE-IVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNY 131 (302)
T ss_pred HHHHHHHHHhCCCCCeeeeeh-eecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 346778899999999999999 443332 123689999996668888886555569999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+.||+|+||||+||+++.++.+||+|||.+........
T Consensus 132 LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------- 171 (302)
T cd07864 132 CHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES---------------------------------------- 171 (302)
T ss_pred HHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc----------------------------------------
Confidence 9999999999999999999999999999988743211100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccch
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIw 295 (720)
. ......++..|+|||.+.+. .++.++|||
T Consensus 172 ---------------------------------------------~----~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~ 202 (302)
T cd07864 172 ---------------------------------------------R----PYTNKVITLWYRPPELLLGEERYGPAIDVW 202 (302)
T ss_pred ---------------------------------------------c----ccccceeccCccChHHhcCCCCCCchhHHH
Confidence 0 00002457789999988654 378999999
Q ss_pred hhhchhhhccc---cCCCCchHHHH--HHHhhcCCCCcc--------------------------ccccCchHHHHHHHc
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRT--MSSLRHRVLPPQ--------------------------LLLKFPKEASFCLWL 344 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~--~~~l~~~~~p~~--------------------------~~~~~p~~~~Li~~~ 344 (720)
||||++|||++ ||......... +........+.. +....+...+|+.+|
T Consensus 203 slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 282 (302)
T cd07864 203 SCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHM 282 (302)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHH
Confidence 99999999999 45433322111 111111111100 111223445999999
Q ss_pred CCCCCCCCCChHHHHcCccc
Q 004989 345 LHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+.+|.+||++.+++.||||
T Consensus 283 l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 283 LTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ccCChhhCCCHHHHhcCCCC
Confidence 99999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=257.26 Aligned_cols=205 Identities=17% Similarity=0.171 Sum_probs=154.7
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+...|..++..+ +||||+++++ ++.... .+|++||| .+++|.++|.... ..++..+++.
T Consensus 69 ~~~~e~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 144 (307)
T cd05098 69 DLISEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVS 144 (307)
T ss_pred HHHHHHHHHHHhcCCCCEeeEEE-EEecCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHH
Confidence 344677788888 7999999999 554443 57999999 8899999995421 2488899999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||+|||++|++||||||+||+++.++.++|+|||.+......
T Consensus 145 ~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~------------------------------- 193 (307)
T cd05098 145 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------------------------------- 193 (307)
T ss_pred HHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccccccc-------------------------------
Confidence 9999999999999999999999999999999999999999887432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
++.. ......+++.|+|||.+.+
T Consensus 194 ---~~~~------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 216 (307)
T cd05098 194 ---DYYK------------------------------------------------------KTTNGRLPVKWMAPEALFD 216 (307)
T ss_pred ---chhh------------------------------------------------------ccccCCCccceeChHHhcc
Confidence 0000 0000124568999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||... ........+.....++......+...+|+.+||+.+|.+||++.++++
T Consensus 217 ~~~~~~~DvwslG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 217 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-CHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 889999999999999999987 45433 333444444444333322223345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=251.54 Aligned_cols=207 Identities=19% Similarity=0.262 Sum_probs=155.3
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|...+.+++ ||||+++++ ++.++ ...|++|||.+++|.+++.... ..+++..++.++.||+.+|.|||++
T Consensus 43 ~~~~e~~~l~~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~ 118 (283)
T cd07830 43 MNLREVKSLRKLNEHPNIVKLKE-VFREN---DELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH 118 (283)
T ss_pred HHHHHHHHHHhccCCCCchhHHH-HhhcC---CcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3446777888999 999999999 44443 3679999998889999885443 4589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 119 ~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--------------------------------------------- 153 (283)
T cd07830 119 GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--------------------------------------------- 153 (283)
T ss_pred CcccCCCChhhEEEcCCCCEEEeecccceeccCCC---------------------------------------------
Confidence 99999999999999999999999988763211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
......++..|+|||++.+. .++.++|||||||
T Consensus 154 ----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~ 187 (283)
T cd07830 154 ----------------------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGC 187 (283)
T ss_pred ----------------------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHH
Confidence 00013578899999988554 4799999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh--cC------------------CCC--------ccccccCchHHHHHHHcCCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLR--HR------------------VLP--------PQLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~--~~------------------~~p--------~~~~~~~p~~~~Li~~~L~~d 348 (720)
++|||++ ||.............. .. .++ ..+....+...+|+.+||+.+
T Consensus 188 ~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 267 (283)
T cd07830 188 IMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWD 267 (283)
T ss_pred HHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccC
Confidence 9999999 4544333222111110 00 000 001112345569999999999
Q ss_pred CCCCCChHHHHcCccc
Q 004989 349 PSGRPKMGELLQSEFL 364 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~ 364 (720)
|++|||+.|++.||||
T Consensus 268 p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 268 PKKRPTASQALQHPYF 283 (283)
T ss_pred cccCCCHHHHhhCCCC
Confidence 9999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-28 Score=259.72 Aligned_cols=210 Identities=17% Similarity=0.176 Sum_probs=156.8
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..++.+++||||+++++.+..... .+|++|||.+++|.+++... .+++..+..++.||+.||.|||++||+||
T Consensus 58 ~E~~~l~~l~hpniv~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~iiH~ 132 (328)
T cd07856 58 RELKLLKHLRHENIISLSDIFISPLE---DIYFVTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHR 132 (328)
T ss_pred HHHHHHHhcCCCCeeeEeeeEecCCC---cEEEEeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 67778999999999999994333232 57899999888999988543 38899999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccc
Q 004989 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.++|+|||.+......
T Consensus 133 dl~p~Nili~~~~~~~l~dfg~~~~~~~~--------------------------------------------------- 161 (328)
T cd07856 133 DLKPSNILINENCDLKICDFGLARIQDPQ--------------------------------------------------- 161 (328)
T ss_pred CCCHHHEeECCCCCEEeCccccccccCCC---------------------------------------------------
Confidence 99999999999999999988876321000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchhhhc
Q 004989 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eL 304 (720)
.....+++.|+|||.+.+ ..++.++|||||||++|+|
T Consensus 162 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el 199 (328)
T cd07856 162 ------------------------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEM 199 (328)
T ss_pred ------------------------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHH
Confidence 001356888999999866 4589999999999999999
Q ss_pred cc---cCCCCchHHHH--HHH------------------------hhcC-CCCc-cc-cccCchHHHHHHHcCCCCCCCC
Q 004989 305 FC---PFSTGEEKTRT--MSS------------------------LRHR-VLPP-QL-LLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 305 lt---pf~~~~~~~~~--~~~------------------------l~~~-~~p~-~~-~~~~p~~~~Li~~~L~~dP~~R 352 (720)
++ ||......... ... +... ..|. .. ....+...++|.+||..+|++|
T Consensus 200 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 279 (328)
T cd07856 200 LEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKR 279 (328)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhC
Confidence 99 55443221100 000 0000 0000 01 1122345699999999999999
Q ss_pred CChHHHHcCcccCCCccchHH
Q 004989 353 PKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~l~e 373 (720)
||+.+++.||||.....+..+
T Consensus 280 ~t~~ell~~~~~~~~~~~~~~ 300 (328)
T cd07856 280 ISAAEALAHPYLAPYHDPTDE 300 (328)
T ss_pred CCHHHHhcCCccccccCCccc
Confidence 999999999999887666554
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-28 Score=250.42 Aligned_cols=208 Identities=20% Similarity=0.261 Sum_probs=159.0
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
...+..+|..++.+++||||+++++ .+.+.. ..+++||| .+++|.+++. .....+++.+++.++.||+.||.
T Consensus 45 ~~~~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (260)
T cd08222 45 ETVQANQEAQLLSKLDHPAIVKFHA-SFLERD---AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120 (260)
T ss_pred hHHHHHHHHHHHHhCCCCcHHHHHH-HHhcCC---ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHH
Confidence 3344556778899999999999999 443333 57999999 8899999884 23456899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||+.|++|+||||+||+++. +.++++|||.+...... .+.
T Consensus 121 ~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~---------------------------------~~~----- 161 (260)
T cd08222 121 YMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS---------------------------------CDL----- 161 (260)
T ss_pred HHHHcCccccCCChhheEeec-CCEeecccCceeecCCC---------------------------------ccc-----
Confidence 999999999999999999974 67999988876332100 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.....|++.|+|||.+.+..++.++|+|
T Consensus 162 ----------------------------------------------------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~ 189 (260)
T cd08222 162 ----------------------------------------------------ATTFTGTPYYMSPEALKHQGYDSKSDIW 189 (260)
T ss_pred ----------------------------------------------------ccCCCCCcCccCHHHHccCCCCchhhHH
Confidence 0013468899999999888789999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||+++|+|++ ||...... .....+.....+. +...+ +...+++.+||..+|++||++.++++||||
T Consensus 190 slG~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 190 SLGCILYEMCCLAHAFEGQNFL-SVVLRIVEGPTPS-LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHHHhCCCCCCCccHH-HHHHHHHcCCCCC-CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 99999999998 56544333 3333333333333 23333 345599999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-28 Score=252.98 Aligned_cols=209 Identities=19% Similarity=0.138 Sum_probs=151.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.++..+ ...++++||| .+++|.+++.+....+++..++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~ 128 (284)
T cd05081 51 DFEREIEILKSLQHDNIVKYKGVCYSAG--RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR 128 (284)
T ss_pred HHHHHHHHHHhCCCCCeeEEEEEEccCC--CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447778999999999999999443322 2357999999 899999999655455899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++....... ++
T Consensus 129 i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----------- 164 (284)
T cd05081 129 YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK---------------------------------EY----------- 164 (284)
T ss_pred ceeccCCHhhEEECCCCeEEECCCcccccccCCC---------------------------------cc-----------
Confidence 9999999999999999999999988874321100 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
... .....++..|+|||.+.+..++.++|||||||++
T Consensus 165 -----------------------~~~--------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 201 (284)
T cd05081 165 -----------------------YKV--------------------REPGESPIFWYAPESLTESKFSVASDVWSFGVVL 201 (284)
T ss_pred -----------------------eee--------------------cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHH
Confidence 000 0001234569999999888899999999999999
Q ss_pred hhcccc---CCCCchH---------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFCP---FSTGEEK---------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltp---f~~~~~~---------------~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++. +...... ......+.....++......+...+|+.+||.++|++|||+.|+++
T Consensus 202 ~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 202 YELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 999982 2111100 0011111222222222222234559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=247.17 Aligned_cols=206 Identities=18% Similarity=0.233 Sum_probs=160.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++... ..++++||| .+++|.+++... ..+++..+..++.||+.||.|||+.|
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~ 119 (254)
T cd06627 45 SIMQEIDLLKNLKHPNIVKYIG-SIETS---DSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG 119 (254)
T ss_pred HHHHHHHHHHhCCCCCccEEEE-EEEeC---CEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4447778899999999999999 44443 257999999 889999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 120 i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 154 (254)
T cd06627 120 VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK--------------------------------------------- 154 (254)
T ss_pred cccCCCCHHHEEECCCCCEEEeccccceecCCCcc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++||||||+++
T Consensus 155 ---------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l 189 (254)
T cd06627 155 ---------------------------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTV 189 (254)
T ss_pred ---------------------------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHH
Confidence 00013568899999999887789999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||...... ..+..+.....++......+...+|+.+||..+|++|||+.+++.||||
T Consensus 190 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 190 IELLTGNPPYYDLNPM-AALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHhCCCCCCCccHH-HHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 99999 55544433 2222232333332222223445599999999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-28 Score=252.22 Aligned_cols=209 Identities=19% Similarity=0.205 Sum_probs=155.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++.... ....+++|||.+++|.+++......+++..++.++.||+.||.|||++|++
T Consensus 45 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~ 122 (287)
T cd07840 45 AIREIKLLQKLRHPNIVRLKE-IVTSKG-KGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGIL 122 (287)
T ss_pred HHHHHHHHHhccCCCeeehee-eEecCC-CCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 336777899999999999999 443331 236899999966799999966545699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 123 h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------- 155 (287)
T cd07840 123 HRDIKGSNILINNDGVLKLADFGLARPYTKRNS----------------------------------------------- 155 (287)
T ss_pred eccCcHHHeEEcCCCCEEEccccceeeccCCCc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
.......++..|+|||.+.+. .++.++|||||||++|
T Consensus 156 ------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~ 193 (287)
T cd07840 156 ------------------------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILA 193 (287)
T ss_pred ------------------------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHH
Confidence 000012467889999987654 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--CC-----------------------C----cccccc-CchHHHHHHHcCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR--VL-----------------------P----PQLLLK-FPKEASFCLWLLHPEP 349 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--~~-----------------------p----~~~~~~-~p~~~~Li~~~L~~dP 349 (720)
||++ ||....... ....+... .. + ..+... .+...+++.+||..+|
T Consensus 194 el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P 272 (287)
T cd07840 194 ELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDP 272 (287)
T ss_pred HHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCCh
Confidence 9999 555443321 11111110 00 0 001111 3444599999999999
Q ss_pred CCCCChHHHHcCccc
Q 004989 350 SGRPKMGELLQSEFL 364 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~ 364 (720)
.+||++.++++||||
T Consensus 273 ~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 273 KKRISADQALQHEYF 287 (287)
T ss_pred hhCcCHHHHhhCcCC
Confidence 999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=247.98 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=153.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++..++||||+++++ ++.+. ...+++||| .+++|.+++.... ..+++..++.++.||+.||.|||++
T Consensus 46 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~ 121 (256)
T cd05039 46 AFLAEASVMTTLRHPNLVQLLG-VVLQG---NPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK 121 (256)
T ss_pred HHHHHHHHHHhcCCcceeeeEE-EEcCC---CCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4447778999999999999999 44443 357999999 8899999995433 3589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||.+.......
T Consensus 122 ~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--------------------------------------------- 156 (256)
T cd05039 122 NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--------------------------------------------- 156 (256)
T ss_pred CccchhcccceEEEeCCCCEEEccccccccccccc---------------------------------------------
Confidence 99999999999999999999999988873321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....++..|+|||.+.+..++.++|||||||+
T Consensus 157 ------------------------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~i 188 (256)
T cd05039 157 ------------------------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188 (256)
T ss_pred ------------------------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHH
Confidence 00123557999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||..... ......+.....+ ...... +...+|+.+||..+|++||++.+++.
T Consensus 189 l~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 189 LWEIYSFGRVPYPRIPL-KDVVPHVEKGYRM-EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHhcCCCCCCCCCH-HHHHHHHhcCCCC-CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 999986 5544332 2333333333222 222233 44559999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=260.25 Aligned_cols=207 Identities=19% Similarity=0.218 Sum_probs=153.4
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------------------
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------- 115 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------------- 115 (720)
..+|..+|.++ +||||+++++.+...+ ..++++||| .+++|.+++....
T Consensus 57 ~~~E~~~l~~l~~h~niv~~~~~~~~~~---~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (343)
T cd05103 57 LMSELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISED 133 (343)
T ss_pred HHHHHHHHHhccCCccHhhhcceeecCC---CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhh
Confidence 33677788888 6899999999433332 257899999 9999999984321
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 004989 116 ----------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 155 (720)
Q Consensus 116 ----------------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~ 155 (720)
..++...+..++.||+.||.|||++||+||||||+|||++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~ 213 (343)
T cd05103 134 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 213 (343)
T ss_pred hhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc
Confidence 2367788899999999999999999999999999999999
Q ss_pred cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccc
Q 004989 156 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 235 (720)
Q Consensus 156 ~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~ 235 (720)
.++.++|+|||++....... .+
T Consensus 214 ~~~~~kl~dfg~~~~~~~~~---------------------------------~~------------------------- 235 (343)
T cd05103 214 ENNVVKICDFGLARDIYKDP---------------------------------DY------------------------- 235 (343)
T ss_pred CCCcEEEEecccccccccCc---------------------------------ch-------------------------
Confidence 99999999999874321110 00
Q ss_pred cccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCC
Q 004989 236 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTG 311 (720)
Q Consensus 236 ~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~ 311 (720)
. ......+++.|+|||.+.+..++.++|||||||++|+|++ ||...
T Consensus 236 ------------~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 285 (343)
T cd05103 236 ------------V------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 285 (343)
T ss_pred ------------h------------------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence 0 0000234677999999988889999999999999999986 55543
Q ss_pred chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 312 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 312 ~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
.........+..+..++......+...+++.+||+.||++|||+.||++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 286 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred cccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 32223333333333222222233566799999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-28 Score=265.18 Aligned_cols=200 Identities=19% Similarity=0.229 Sum_probs=159.2
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.++.+++|||||++||+..... ++|+|||+ .||+|.++|++.+..++..+...++.+.+.||+|||++++||
T Consensus 210 ~EArvMr~l~H~NVVr~yGVa~~~~----Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IH 285 (474)
T KOG0194|consen 210 KEARVMRQLNHPNVVRFYGVAVLEE----PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIH 285 (474)
T ss_pred HHHHHHHhCCCCCEEEEEEEEcCCC----ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcc
Confidence 8999999999999999999444333 68999999 999999999777667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||-..|+|++.++.+||+|||+++.-..... ..+
T Consensus 286 RDIAARNcL~~~~~~vKISDFGLs~~~~~~~~-------------------------------~~~-------------- 320 (474)
T KOG0194|consen 286 RDIAARNCLYSKKGVVKISDFGLSRAGSQYVM-------------------------------KKF-------------- 320 (474)
T ss_pred hhHhHHHheecCCCeEEeCccccccCCcceee-------------------------------ccc--------------
Confidence 99999999999999999999988732100000 000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
..--...|+|||.+....|++++|||||||++||+
T Consensus 321 ---------------------------------------------~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Ei 355 (474)
T KOG0194|consen 321 ---------------------------------------------LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEI 355 (474)
T ss_pred ---------------------------------------------cccCcceecChhhhccCccccccchhheeeeEEee
Confidence 00114579999999998999999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004989 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||.+.... .....+....++...+...|.+. .++..|+..+|++||++.++.+
T Consensus 356 f~~g~~Py~g~~~~-~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 356 FENGAEPYPGMKNY-EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred eccCCCCCCCCCHH-HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 98 77776655 44455533223333333555554 8889999999999999999875
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-28 Score=283.86 Aligned_cols=220 Identities=19% Similarity=0.318 Sum_probs=152.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------CCCCCHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------KRSVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----------~~~l~~~~~~~i~~QIl 131 (720)
|..+|..++++++||||+++++ ++.++. ..|++||| .|++|.+++... ...++...++.++.||+
T Consensus 48 rflrEi~ILs~L~HPNIVkl~~-v~~d~~---~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa 123 (932)
T PRK13184 48 RFLREAKIAADLIHPGIVPVYS-ICSDGD---PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKIC 123 (932)
T ss_pred HHHHHHHHHHhCCCcCcCeEEE-EEeeCC---EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHH
Confidence 4457888999999999999999 554443 57999999 999999998431 12355678899999999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||+|||++||+||||||+|||++.++.++|+|||++.......... .+.
T Consensus 124 ~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~-----------------------------~~l- 173 (932)
T PRK13184 124 ATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDL-----------------------------LDI- 173 (932)
T ss_pred HHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccc-----------------------------ccc-
Confidence 99999999999999999999999999999999999985542110000 000
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcc
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.... ...+ ... .......+||+.|+|||++.+..++.+
T Consensus 174 --~~~~----~~s~-----------------------------------~s~-~t~~g~~vGT~~YmAPE~l~g~~~S~k 211 (932)
T PRK13184 174 --DVDE----RNIC-----------------------------------YSS-MTIPGKIVGTPDYMAPERLLGVPASES 211 (932)
T ss_pred --cccc----cccc-----------------------------------ccc-cccCCCCCCCCCCCCHHHhcCCCCCcH
Confidence 0000 0000 000 000012479999999999999999999
Q ss_pred ccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccc--cccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||.............. ..|... .... +...+++.+||.+||++||+..+.+.
T Consensus 212 SDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i--~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 212 TDIYALGVILYQMLTLSFPYRRKKGRKISYRDVI--LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred hHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhc--cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999999 5654332211111111 111111 1123 34459999999999999987655543
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=248.17 Aligned_cols=202 Identities=16% Similarity=0.151 Sum_probs=155.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..++..++||||+++++ ++.... .++++||| .+++|.+++.. .+..+++..++.++.||+.||.|||++|
T Consensus 49 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 124 (261)
T cd05148 49 FQKEVQALKRLRHKHLISLFA-VCSVGE---PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN 124 (261)
T ss_pred HHHHHHHHhcCCCcchhheee-eEecCC---CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346777899999999999999 554443 57999999 88999999954 3445899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+....... +
T Consensus 125 i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~----------------------------------~----------- 159 (261)
T cd05148 125 SIHRDLAARNILVGEDLVCKVADFGLARLIKEDV----------------------------------Y----------- 159 (261)
T ss_pred eeccccCcceEEEcCCceEEEccccchhhcCCcc----------------------------------c-----------
Confidence 9999999999999999999999998874321110 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. .....++..|+|||.+.+..++.++|||||||++
T Consensus 160 ---~------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l 194 (261)
T cd05148 160 ---L------------------------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILL 194 (261)
T ss_pred ---c------------------------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHH
Confidence 0 0002346789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....++......+...+++.+||..||.+|||+.++++
T Consensus 195 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 195 YEMFTYGQVPYPGMNNH-EVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHcCCCCCCCcCCHH-HHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99997 55544332 333333333333332333345569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=253.25 Aligned_cols=205 Identities=16% Similarity=0.184 Sum_probs=154.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-----------------------CCCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSV 118 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-----------------------~~~l 118 (720)
+...|..+|+.++||||+++++ .+.... ..+++||| .+++|.+++... ...+
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 124 (290)
T cd05045 49 DLLSEFNLLKQVNHPHVIKLYG-ACSQDG---PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERAL 124 (290)
T ss_pred HHHHHHHHHhhCCCCCEeeEEE-EEecCC---CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCcccccc
Confidence 3447788999999999999999 444433 46899999 889999998431 1347
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++..++.++.||+.||.|||+.||+||||||+|||++.++.++|+|||.+.......
T Consensus 125 ~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~----------------------- 181 (290)
T cd05045 125 TMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED----------------------- 181 (290)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCcc-----------------------
Confidence 889999999999999999999999999999999999999999999998874321100
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
+. . ......++..|+
T Consensus 182 ----------~~------------------------------------~-------------------~~~~~~~~~~y~ 196 (290)
T cd05045 182 ----------SY------------------------------------V-------------------KRSKGRIPVKWM 196 (290)
T ss_pred ----------ch------------------------------------h-------------------cccCCCCCcccc
Confidence 00 0 000023466899
Q ss_pred CcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||.+.+..++.++|||||||++|||++ ||.+... ......+.....++..........+|+.+||.++|.+||+
T Consensus 197 apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~ 275 (290)
T cd05045 197 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-ERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPT 275 (290)
T ss_pred CHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCC
Confidence 9999988889999999999999999997 5654433 2334444433322222223345569999999999999999
Q ss_pred hHHHHc
Q 004989 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.+++.
T Consensus 276 ~~~i~~ 281 (290)
T cd05045 276 FADISK 281 (290)
T ss_pred HHHHHH
Confidence 999975
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=249.55 Aligned_cols=203 Identities=15% Similarity=0.191 Sum_probs=147.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----RSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..++..++||||+++++ .+... ..+|++||| .+++|.++|.... ...++..++.++.||+.||.|||+
T Consensus 43 ~~e~~~~~~l~h~nii~~~~-~~~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 118 (269)
T cd05042 43 LQEVQPYRELNHPNVLQCLG-QCIES---IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ 118 (269)
T ss_pred HHHHHHHHhCCCCCcceEEE-EECCC---CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence 36777888999999999999 44433 257999999 8999999995432 224678889999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+|++|||++....... .+
T Consensus 119 ~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------------------------~~--------- 156 (269)
T cd05042 119 ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED---------------------------------YY--------- 156 (269)
T ss_pred cCEecccccHhheEecCCCcEEEeccccccccccch---------------------------------he---------
Confidence 999999999999999999999999998873221100 00
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-------CCCCccc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCAS 292 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------~~~s~~s 292 (720)
. ......+++.|+|||++.. ..++.++
T Consensus 157 ---------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~ 190 (269)
T cd05042 157 ---------------------------I-------------------TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKS 190 (269)
T ss_pred ---------------------------e-------------------ccCCCCCcccccCHHHHhhccccccccccchhh
Confidence 0 0000245678999999743 3468899
Q ss_pred cchhhhchhhhccc----cCCCCchHHHHHHHhhcCC---CCccccccCchH-HHHHHHcCCCCCCCCCChHHHHc
Q 004989 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRV---LPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~---~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|||++ ||............+.... ..+.....++.. .+++..|+ .||++|||+++|++
T Consensus 191 DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 191 NIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 99999999999998 4555444332333333221 223333344444 47888888 59999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=254.17 Aligned_cols=209 Identities=18% Similarity=0.312 Sum_probs=162.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+++.++||||+++++ .+.... ..+++||| .+++|.+++... .+++..++.++.||+.||.|||+.|
T Consensus 63 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~g 136 (292)
T cd06657 63 LLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQG 136 (292)
T ss_pred HHHHHHHHHHhcCCcchhheee-EEEeCC---EEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446778999999999999999 554443 67999999 899999988443 3899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++++|||.+...... +
T Consensus 137 ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~-----------------------------------~----------- 170 (292)
T cd06657 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-----------------------------------V----------- 170 (292)
T ss_pred eecCCCCHHHEEECCCCCEEEcccccceecccc-----------------------------------c-----------
Confidence 999999999999999999999999876321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......|++.|+|||.+.+..++.++|+|||||++
T Consensus 171 --------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil 206 (292)
T cd06657 171 --------------------------------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 206 (292)
T ss_pred --------------------------------------------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence 000013578899999999887889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|+|++ ||...... .....+... .++. .....+...+++.+||..+|.+||++.+++.||||.....
T Consensus 207 ~el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 207 IEMVDGEPPYFNEPPL-KAMKMIRDN-LPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhh-CCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 99998 56544332 222233222 2222 2223455669999999999999999999999999998754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=248.87 Aligned_cols=208 Identities=14% Similarity=0.171 Sum_probs=154.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ ++..+. .++++||| .+++|.+++......+++.+++.++.|++.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~ni~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g 126 (269)
T cd05065 51 DFLSEASIMGQFDHPNIIHLEG-VVTKSR---PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN 126 (269)
T ss_pred HHHHHHHHHHhCCCcCcceEEE-EECCCC---ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3346778999999999999999 444433 57999999 889999999665566899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||||+||+++.++.++++|||.+......... ..+
T Consensus 127 ~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~~----------- 165 (269)
T cd05065 127 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD------------------------------PTY----------- 165 (269)
T ss_pred EeecccChheEEEcCCCcEEECCCccccccccCccc------------------------------ccc-----------
Confidence 999999999999999999999998876432111000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. .......+..|+|||.+.+..++.++|||||||++
T Consensus 166 -------------------------~-------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l 201 (269)
T cd05065 166 -------------------------T-------------------SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 201 (269)
T ss_pred -------------------------c-------------------cccCCCcceeecCHhHhccCcccchhhhhhhHHHH
Confidence 0 00001124579999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+......+......+...+++.+||..+|.+||++.+++.
T Consensus 202 ~e~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 202 WEVMSYGERPYWDMSNQ-DVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HHHhcCCCCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99886 56544333 333333332222222222234459999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=252.14 Aligned_cols=204 Identities=17% Similarity=0.187 Sum_probs=151.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------CCCCHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------RSVDVYECLHIFRQIV 131 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------~~l~~~~~~~i~~QIl 131 (720)
..+|..+|.+++||||+++++ ++.... ..+++||| .+++|.+++.... ..+++..++.++.||+
T Consensus 64 ~~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 139 (295)
T cd05097 64 FLKEIKIMSRLKNPNIIRLLG-VCVSDD---PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIA 139 (295)
T ss_pred HHHHHHHHHhCCCCCcCeEEE-EEcCCC---ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHH
Confidence 346777999999999999999 554443 57999999 8999999994321 2368889999999999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||.|||++|++||||||+||+++.++.+||+|||++...... ..
T Consensus 140 ~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----------------------------------~~- 184 (295)
T cd05097 140 SGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSG----------------------------------DY- 184 (295)
T ss_pred HHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccC----------------------------------cc-
Confidence 9999999999999999999999999999999999887332100 00
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcc
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.. ......++..|+|||++.+..++.+
T Consensus 185 -~~----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~ 211 (295)
T cd05097 185 -YR----------------------------------------------------IQGRAVLPIRWMAWESILLGKFTTA 211 (295)
T ss_pred -ee----------------------------------------------------ccCcCcCceeecChhhhccCCcCch
Confidence 00 0001245778999999988889999
Q ss_pred ccchhhhchhhhccc-----cCCCCchHHHHHHHh----h---cCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHH
Q 004989 292 SDIYRLGVLLFELFC-----PFSTGEEKTRTMSSL----R---HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 292 sDIwSLGvll~eLlt-----pf~~~~~~~~~~~~l----~---~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
+|||||||++|+|++ ||....... ....+ . ............+...+|+.+||..+|.+||++++|+
T Consensus 212 ~DvwSlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~ 290 (295)
T cd05097 212 SDVWAFGVTLWEMFTLCKEQPYSLLSDEQ-VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIH 290 (295)
T ss_pred hhHHHHHHHHHHHHHcCCCCCCcccChHH-HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 999999999999987 555433221 11111 1 1111111112234556999999999999999999997
Q ss_pred c
Q 004989 360 Q 360 (720)
Q Consensus 360 ~ 360 (720)
+
T Consensus 291 ~ 291 (295)
T cd05097 291 H 291 (295)
T ss_pred H
Confidence 5
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=248.12 Aligned_cols=205 Identities=15% Similarity=0.137 Sum_probs=152.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC------CCCCCCHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..+|+.++||||+++++ ++.... ..+++||| .+++|.+++.. ....+++.+++.++.||+.||.
T Consensus 45 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (269)
T cd05044 45 EFLKEAHLMSNFNHPNIVKLLG-VCLLNE---PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120 (269)
T ss_pred HHHHHHHHHHhcCCCCeeeEee-eecCCC---CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH
Confidence 3446778999999999999999 444433 57999999 89999999943 2234788999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCC-----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFN-----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~-----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
|||+.+++|+||||+||+++.++ .++++|||++........ +
T Consensus 121 ~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~ 167 (269)
T cd05044 121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDY---------------------------------Y 167 (269)
T ss_pred HHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccc---------------------------------c
Confidence 99999999999999999999877 899988887743211000 0
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
.......++..|+|||.+.+..++.
T Consensus 168 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 192 (269)
T cd05044 168 -------------------------------------------------------RKEGEGLLPVRWMAPESLLDGKFTT 192 (269)
T ss_pred -------------------------------------------------------ccCcccCCCccccCHHHHccCCccc
Confidence 0000023467899999999888999
Q ss_pred cccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||||||++|||++ ||...... .....+.....+.......+...+|+.+||.++|.+||++.++++
T Consensus 193 ~~Dv~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 193 QSDVWSFGVLMWEILTLGQQPYPALNNQ-EVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred chhHHHHHHHHHHHHHcCCCCCcccCHH-HHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999997 55543332 333333332222211222234459999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-28 Score=272.25 Aligned_cols=206 Identities=20% Similarity=0.238 Sum_probs=165.4
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------C----CCCCHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------K----RSVDVYECLH 125 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~----~~l~~~~~~~ 125 (720)
.....+||+.+|+.++|||||+|+|++.+.+ ++|+|+|| ..|||.+||+.. + .+++..+.++
T Consensus 532 ~~~dF~REaeLla~l~H~nIVrLlGVC~~~~----P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~ 607 (774)
T KOG1026|consen 532 ARQDFRREAELLAELQHPNIVRLLGVCREGD----PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLH 607 (774)
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEEEEccCC----eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHH
Confidence 3444558888999999999999999544444 68999999 999999999421 1 2388999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
|+.||+.|+.||-++.+|||||-..|+|+.++-.|||.|||++++.=.
T Consensus 608 iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYs-------------------------------- 655 (774)
T KOG1026|consen 608 IATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYS-------------------------------- 655 (774)
T ss_pred HHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhh--------------------------------
Confidence 999999999999999999999999999999999999999999976311
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+|+ .+.... -+=...|||||.+..
T Consensus 656 --sDY----------------------------------Yk~~~~--------------------t~lPIRWMppEsIly 679 (774)
T KOG1026|consen 656 --SDY----------------------------------YKVRGN--------------------TLLPIRWMPPESILY 679 (774)
T ss_pred --hhh----------------------------------hcccCC--------------------ceeeeecCCHHHhhc
Confidence 111 000000 012567999999999
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHH
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL 359 (720)
++|+++|||||+||+|||+++ ||.+.... +.+..++.+.+-+.. ..+|.. .+||..||+.+|++||++.||-
T Consensus 680 ~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~-EVIe~i~~g~lL~~P-e~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 680 GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ-EVIECIRAGQLLSCP-ENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred CcccchhhhhhhhhhhhhhhccccCcccccchH-HHHHHHHcCCcccCC-CCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 999999999999999999999 88776554 677778877764443 445555 4999999999999999999984
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-28 Score=281.39 Aligned_cols=249 Identities=14% Similarity=0.195 Sum_probs=184.7
Q ss_pred CcccccccccCCcccccccccCCCCCC----------cccccccccCCCCccchhhchhhhhhcccCCCCCceeccccee
Q 004989 18 SSDSAWQDSDSSRALNISGVSDRNPRL----------LRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVC 87 (720)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~ 87 (720)
+..-.|.+....+.+|.+.|+...-+. ..+.-..+....+.......-+|+.+|+.++|||||+++|+.+
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l 765 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL 765 (1025)
T ss_pred cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence 334456677777888888777622111 1111111112222223334448999999999999999999555
Q ss_pred ecCCCCCcEEEEEec-CCCCHHHHHhCC------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCce
Q 004989 88 ENEAAIDPFVHAIEW-GDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 160 (720)
Q Consensus 88 ~~~~~~~~~~lv~E~-~ggsL~~~L~~~------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~v 160 (720)
... ..+|++|| .||+|..||++. ...++..+.+.++.||+.|+.||+++++|||||-..|+||+....|
T Consensus 766 ~~~----~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 766 DSG----PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred CCC----CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcE
Confidence 422 56999999 999999999776 6668999999999999999999999999999999999999999999
Q ss_pred EEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccc
Q 004989 161 SFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240 (720)
Q Consensus 161 kliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~ 240 (720)
||.|||+|+|.-.. |+
T Consensus 842 KIaDFGlArDiy~~----------------------------------~y------------------------------ 857 (1025)
T KOG1095|consen 842 KIADFGLARDIYDK----------------------------------DY------------------------------ 857 (1025)
T ss_pred EEcccchhHhhhhc----------------------------------hh------------------------------
Confidence 99999999743111 00
Q ss_pred ccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHH
Q 004989 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTR 316 (720)
Q Consensus 241 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~ 316 (720)
+...+ . .+-...|||||.+....++.++|||||||+|||+++ ||........
T Consensus 858 ------yr~~~---------~---------a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v 913 (1025)
T KOG1095|consen 858 ------YRKHG---------E---------AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV 913 (1025)
T ss_pred ------eeccC---------c---------cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH
Confidence 00000 0 011346999999999889999999999999999999 8888777655
Q ss_pred HHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004989 317 TMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 317 ~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+...+..+.+++. ..+|+.. ++|..||+.+|++||++..|++
T Consensus 914 ~~~~~~ggRL~~P--~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 914 LLDVLEGGRLDPP--SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHhCCccCCC--CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 5445555544432 3555544 9999999999999999999987
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-28 Score=267.98 Aligned_cols=211 Identities=17% Similarity=0.219 Sum_probs=157.9
Q ss_pred hchhhhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCC---CHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV---DVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l---~~~~~~~i~~QIl~aL~yLH 138 (720)
+..||+..|.. =.|||||++|+ .+......||..|.+..+|.+++......+ .....+.++.|++.||++||
T Consensus 548 ~A~rEi~lL~eSD~H~NviRyyc----~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH 623 (903)
T KOG1027|consen 548 FAQREIQLLQESDEHPNVIRYYC----SEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH 623 (903)
T ss_pred HHHHHHHHHHhccCCCceEEEEe----eccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH
Confidence 34477777776 45999999999 444445789999999999999996632111 11456889999999999999
Q ss_pred HCCceeccCCCCcEEEcc---C--CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 139 SQGIVVHNVRPSCFVMSS---F--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~---~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
+.+||||||||.||||+. + ..++|.|||+|+..+... ..|
T Consensus 624 sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~--------------------------------sS~--- 668 (903)
T KOG1027|consen 624 SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK--------------------------------SSF--- 668 (903)
T ss_pred hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc--------------------------------chh---
Confidence 999999999999999985 2 357888888885532220 001
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
. +.....||.+|+|||++....-+.++|
T Consensus 669 -------------------~---------------------------------r~s~~sGt~GW~APE~L~~~~~~~avD 696 (903)
T KOG1027|consen 669 -------------------S---------------------------------RLSGGSGTSGWQAPEQLREDRKTQAVD 696 (903)
T ss_pred -------------------h---------------------------------cccCCCCcccccCHHHHhccccCcccc
Confidence 0 001146899999999999988888999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc--hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p--~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||||++|+.++ ||...- ....+|..+...-......+ ...+||.+||+++|..||+|.++|.||||-..
T Consensus 697 iFslGCvfyYvltgG~HpFGd~~---~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 697 IFSLGCVFYYVLTGGSHPFGDSL---ERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred hhhcCceEEEEecCCccCCCchH---HhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 9999999999999 665533 33334444443332222233 55699999999999999999999999999886
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=245.19 Aligned_cols=204 Identities=20% Similarity=0.257 Sum_probs=159.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ .++.+. ..|++||| .+++|.+++.... .+++..+..++.||+.||.|||+.|
T Consensus 39 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~ 113 (250)
T cd05123 39 HTLTERNILSRINHPFIVKLHY-AFQTEE---KLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLG 113 (250)
T ss_pred HHHHHHHHHHHcCCCcHHHHHH-HeecCC---eeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4456677899999999999998 444443 57999999 6999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+....... +
T Consensus 114 ~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------~------------ 148 (250)
T cd05123 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---------------------------------S------------ 148 (250)
T ss_pred ceecCCCcceEEEcCCCcEEEeecCcceecccCC---------------------------------C------------
Confidence 9999999999999999999999998874321110 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+...+.++|+||||+++
T Consensus 149 ---------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~ 183 (250)
T cd05123 149 ---------------------------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLL 183 (250)
T ss_pred ---------------------------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHH
Confidence 00113568889999999888889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCCh---HHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKM---GELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta---~eiL~hp~~ 364 (720)
|+|++ ||...... .....+....+ .+... .....+|+.+||..||..||++ .++++||||
T Consensus 184 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 184 YEMLTGKPPFYAEDRK-EIYEKILKDPL--RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHhcCCC--CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 99999 66544432 33333332211 12222 3445699999999999999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=254.23 Aligned_cols=203 Identities=16% Similarity=0.126 Sum_probs=154.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++... ..++++|| .+++|.+++......+++..+..++.||+.||.|||++||
T Consensus 56 ~~~e~~~~~~l~h~niv~~~~-~~~~~----~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 130 (303)
T cd05110 56 FMDEALIMASMDHPHLVRLLG-VCLSP----TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 130 (303)
T ss_pred HHHHHHHHHhCCCCCcccEEE-EEcCC----CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 346778899999999999999 54433 24788999 8899999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+......... +
T Consensus 131 vH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~------------ 166 (303)
T cd05110 131 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE--------------------------------Y------------ 166 (303)
T ss_pred eccccccceeeecCCCceEEccccccccccCcccc--------------------------------c------------
Confidence 99999999999999999999999887432110000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 167 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~ 202 (303)
T cd05110 167 --------------------------------------------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIW 202 (303)
T ss_pred --------------------------------------------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHH
Confidence 000023567899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++.......+..+++..||..+|++||++.++++
T Consensus 203 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 203 ELMTFGGKPYDGIPTR-EIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9986 56543222 222333333333322233455669999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=246.50 Aligned_cols=205 Identities=15% Similarity=0.190 Sum_probs=148.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
...+|..++.+++||||+++++ .+.... .+++|||| .+++|.++|... ...+++..++.++.||+.||.||
T Consensus 41 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l 116 (269)
T cd05087 41 KFLEEAQPYRSLQHSNLLQCLG-QCTEVT---PYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHL 116 (269)
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEcCCC---CcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH
Confidence 3446788999999999999999 444432 57999999 889999999432 12356778889999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+.|++||||||+||+++.++.++|+|||.+...... ++
T Consensus 117 H~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~----------------------------------~~------- 155 (269)
T cd05087 117 HKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE----------------------------------DY------- 155 (269)
T ss_pred HHCCEeccccCcceEEEcCCCcEEECCccccccccCc----------------------------------ce-------
Confidence 9999999999999999999999999999887321110 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-------CCCc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-------PVSC 290 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-------~~s~ 290 (720)
........|++.|+|||++.+. .++.
T Consensus 156 -----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~ 188 (269)
T cd05087 156 -----------------------------------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTK 188 (269)
T ss_pred -----------------------------------------------eecCCCcCCcccccCHhHhccccccccccCCCc
Confidence 0000113567889999998643 2578
Q ss_pred cccchhhhchhhhccc----cCCCCchHHHHHHHhhc---CCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRH---RVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~---~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||||||++|||++ ||............+.. ....+.+... .+...+++..|+ .+|++|||++||+.
T Consensus 189 ~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 189 ESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred cchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 9999999999999986 66554433222222221 1112222222 234458999998 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=246.47 Aligned_cols=202 Identities=14% Similarity=0.143 Sum_probs=153.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++.+++||||+++++ ++... .++++||| .+++|.+++.. .+..+++.+++.++.||+.||.|||+.|
T Consensus 48 ~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ 122 (260)
T cd05067 48 FLAEANLMKQLQHPRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN 122 (260)
T ss_pred HHHHHHHHHhcCCcCeeeEEE-EEccC----CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 346778999999999999998 44332 47999999 89999999843 3446899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||.+.........
T Consensus 123 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------- 158 (260)
T cd05067 123 YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT-------------------------------------------- 158 (260)
T ss_pred eecccccHHhEEEcCCCCEEEccCcceeecCCCCcc--------------------------------------------
Confidence 999999999999999999999998887332110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05067 159 ---------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 193 (260)
T ss_pred ---------------------------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHH
Confidence 00002346789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++..........+|+.+||..+|++||++++++.
T Consensus 194 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 194 TEIVTYGRIPYPGMTNP-EVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHHhCCCCCCCCCChH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99997 56544332 333333333222222222234569999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=244.14 Aligned_cols=201 Identities=20% Similarity=0.272 Sum_probs=155.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~-l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|..++||||+++++ ++... ..++++||| .+++|.+++...... +++..++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~ 125 (258)
T smart00219 50 REARIMRKLDHPNIVKLLG-VCTEE---EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFI 125 (258)
T ss_pred HHHHHHHhcCCCchheEEE-EEcCC---CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 5667888999999999999 44443 257999999 899999999554433 89999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........ +
T Consensus 126 h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~------------- 159 (258)
T smart00219 126 HRDLAARNCLVGENLVVKISDFGLSRDLYDDDY---------------------------------Y------------- 159 (258)
T ss_pred ecccccceEEEccCCeEEEcccCCceecccccc---------------------------------c-------------
Confidence 999999999999999999999998743211100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+..++.++|||||||++|+
T Consensus 160 -------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~ 196 (258)
T smart00219 160 -------------------------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWE 196 (258)
T ss_pred -------------------------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHH
Confidence 0000125788999999987779999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||... ........+.....++......+...+++.+||..+|++|||+.++++
T Consensus 197 l~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 197 IFTLGESPYPGM-SNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHhCCCCCCCCC-CHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 997 44432 333444444444443333333345569999999999999999999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=250.52 Aligned_cols=203 Identities=16% Similarity=0.159 Sum_probs=149.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------CCCCHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----------~~l~~~~~~~i~~QIl~a 133 (720)
.+|..+|..++||||+++++ ++.... .++++||| .+++|.+++.... ..+++..+..++.||+.|
T Consensus 67 ~~E~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 142 (296)
T cd05095 67 LKEIKIMSRLKDPNIIRLLA-VCITSD---PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASG 142 (296)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHH
Confidence 36777899999999999999 454443 47999999 8899999995422 236778999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|+|||+.||+||||||+|||++.++.++|+|||.+....... .+
T Consensus 143 l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~--- 186 (296)
T cd05095 143 MKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGD---------------------------------YY--- 186 (296)
T ss_pred HHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCc---------------------------------ce---
Confidence 999999999999999999999999999999988874321100 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+++.|+|||...+..++.++|
T Consensus 187 ----------------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~D 214 (296)
T cd05095 187 ----------------------------------------------------RIQGRAVLPIRWMSWESILLGKFTTASD 214 (296)
T ss_pred ----------------------------------------------------eccCcCcCccccCCHHHHhcCCccchhh
Confidence 0000023467899999988888999999
Q ss_pred chhhhchhhhccc-----cCCCCchHHHHHHHh-------hcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 294 IYRLGVLLFELFC-----PFSTGEEKTRTMSSL-------RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt-----pf~~~~~~~~~~~~l-------~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||....... ..... ......+......+...+|+.+||+.||.+||++.+|++
T Consensus 215 iwSlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 215 VWAFGVTLWEILTLCKEQPYSQLSDEQ-VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred hhHHHHHHHHHHHhCCCCCccccChHH-HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999996 554332221 11111 111111222222244559999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=252.88 Aligned_cols=203 Identities=23% Similarity=0.274 Sum_probs=150.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|...+.+++||||+++++ ++.... .+++|||| .+++|.++|... ...+++..+..|+.||+.||.|||+++|
T Consensus 49 ~~e~~~l~~l~h~ni~~~~g-~~~~~~---~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~i 124 (259)
T PF07714_consen 49 LNEIQILRKLRHPNIVKLYG-FCIENE---PLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNI 124 (259)
T ss_dssp HHHHHHHHTHSBTTBE-EEE-EEESSS---SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred eecccccccccccccccccc-cccccc---cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36777899999999999999 444332 48999999 889999999655 5569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.+||+|||.+.........
T Consensus 125 iH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~--------------------------------------------- 159 (259)
T PF07714_consen 125 IHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY--------------------------------------------- 159 (259)
T ss_dssp EEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE---------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccc---------------------------------------------
Confidence 99999999999999999999998887432110000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......+...|+|||.+.+..++.++||||||+++|
T Consensus 160 -----------------------~--------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ 196 (259)
T PF07714_consen 160 -----------------------K--------------------NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLY 196 (259)
T ss_dssp -----------------------E--------------------ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHH
T ss_pred -----------------------c--------------------cccccccccccccccccccccccccccccccccccc
Confidence 0 000023467899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++..........+++..||+.+|.+||++.+|++
T Consensus 197 ei~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 197 EILTLGKFPFSDYDNE-EIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHTTSSGTTTTSCHH-HHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred cccccccccccccccc-cccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 9999 56555333 444455444333322223344559999999999999999999985
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=247.26 Aligned_cols=203 Identities=17% Similarity=0.214 Sum_probs=147.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..+++.++||||+++++ .+.+.. ..|++||| .+++|.+++.+. ...+++..++.++.||+.||.|||+.
T Consensus 43 ~~e~~~~~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 118 (268)
T cd05086 43 LQQGDPYRILQHPNILQCLG-QCVEAI---PYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH 118 (268)
T ss_pred HHHHHHHhccCCcchhheEE-EecCCC---ccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 36667888999999999999 554443 57999999 889999999542 23467778899999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+|+||||||+|||++.++.++|+|||.+...... ++
T Consensus 119 ~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~----------------------------------~~---------- 154 (268)
T cd05086 119 NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE----------------------------------DY---------- 154 (268)
T ss_pred CeeccCCccceEEEcCCccEEecccccccccCcc----------------------------------hh----------
Confidence 9999999999999999999999998876221000 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-------CCCCcccc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASD 293 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------~~~s~~sD 293 (720)
........|+..|+|||++.. ..++.++|
T Consensus 155 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~D 190 (268)
T cd05086 155 --------------------------------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSN 190 (268)
T ss_pred --------------------------------------------hhcccCCcCcccccCchhcccccCccccCCCCCcch
Confidence 000001357889999999853 23578999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcC---CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHR---VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~---~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||............+... .+.+.+...+ +...+++..|| .+|.+||++.++++
T Consensus 191 iwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 191 VWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 9999999999986 565544432222222221 1223333333 34458999999 67999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=256.69 Aligned_cols=204 Identities=17% Similarity=0.173 Sum_probs=153.7
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHH
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i 126 (720)
..+|..++.++ +||||+++++ ++.... .++++||| .+++|.++|.+. ...++...++.+
T Consensus 64 ~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 139 (334)
T cd05100 64 LVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSC 139 (334)
T ss_pred HHHHHHHHHhhcCCCCeeeeeE-EEccCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHH
Confidence 34677788888 8999999999 444432 57999999 899999999532 224788899999
Q ss_pred HHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccc
Q 004989 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||++||+||||||+|||++.++.++|+|||.++.......
T Consensus 140 ~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------ 189 (334)
T cd05100 140 AYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY------------------------------ 189 (334)
T ss_pred HHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc------------------------------
Confidence 99999999999999999999999999999999999999988743211100
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC
Q 004989 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
+. ......++..|+|||++.+.
T Consensus 190 ---~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 211 (334)
T cd05100 190 ---YK-------------------------------------------------------KTTNGRLPVKWMAPEALFDR 211 (334)
T ss_pred ---cc-------------------------------------------------------cccCCCcCceEcCHHHhccC
Confidence 00 00001345679999999888
Q ss_pred CCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||.... .......+.....++..........+|+.+||+.+|.+||++.|+++
T Consensus 212 ~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 212 VYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred CcCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 89999999999999999987 454433 23344444433333332233345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-28 Score=251.15 Aligned_cols=220 Identities=20% Similarity=0.258 Sum_probs=159.8
Q ss_pred hhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.++. ||||+++++ ++.... .++++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~~~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~ 124 (280)
T cd05581 50 IEKEVLTRLNGHPGIIKLYY-TFQDEE---NLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGII 124 (280)
T ss_pred HHHHHHHhcccCCCchhHHH-HhcCCc---eEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5666788888 999999999 444433 57999999 7999999996554 599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++++|||.+...+........... . ..++..
T Consensus 125 H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~--------------~--------~~~~~~----------- 171 (280)
T cd05581 125 HRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGD--------------A--------TNIDSQ----------- 171 (280)
T ss_pred ecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCC--------------C--------cccccc-----------
Confidence 9999999999999999999999988654332111000000 0 000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
............|+..|+|||.+.+..++.++|||||||++|+
T Consensus 172 -------------------------------------~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~ 214 (280)
T cd05581 172 -------------------------------------IEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQ 214 (280)
T ss_pred -------------------------------------ccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHH
Confidence 0000001112467899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCccc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~ 364 (720)
|++ ||...... .....+.. ..+|+. ..+...+|+.+||+.+|.+||++ .++++||||
T Consensus 215 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 215 MLTGKPPFRGSNEY-LTFQKILKLEYSFPPN---FPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHhCCCCCCCccHH-HHHHHHHhcCCCCCCc---cCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 999 55444332 22222222 112222 12445699999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=247.83 Aligned_cols=205 Identities=19% Similarity=0.198 Sum_probs=154.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-------CCCCHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------RSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------~~l~~~~~~~i~~QIl~aL 134 (720)
+..+|..++..++||||+++++.++... ...++++|| .+++|.+++.... ..+++..++.++.||+.||
T Consensus 54 ~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l 130 (280)
T cd05043 54 LLLQESCLLYGLSHQNILPILHVCIEDG---EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGM 130 (280)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEecCC---CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence 3447778899999999999999433332 246899999 8899999994421 4589999999999999999
Q ss_pred HHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||++|++||||||+||+++.++.+|++|||+++..... ++..
T Consensus 131 ~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~----------------------------------~~~~-- 174 (280)
T cd05043 131 SYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPM----------------------------------DYHC-- 174 (280)
T ss_pred HHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCC----------------------------------ceEE--
Confidence 9999999999999999999999999999999887432111 0000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
. .....++..|+|||.+.+..++.++||
T Consensus 175 --------------------------------~--------------------~~~~~~~~~y~apE~~~~~~~~~~~Di 202 (280)
T cd05043 175 --------------------------------L--------------------GDNENRPVKWMALESLVNKEYSSASDV 202 (280)
T ss_pred --------------------------------e--------------------CCCCCcchhccCHHHHhcCCCCchhhH
Confidence 0 000134667999999988889999999
Q ss_pred hhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||++|||++ ||...... .....+.....++. ....| ...+++.+||.++|++|||+.++++
T Consensus 203 ~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 203 WSFGVLLWELMTLGQTPYVEIDPF-EMAAYLKDGYRLAQ-PINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHhHHHHHHHhcCCCCCcCcCCHH-HHHHHHHcCCCCCC-CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 999999999997 56544332 33333333322222 22333 4569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=248.36 Aligned_cols=204 Identities=18% Similarity=0.222 Sum_probs=154.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------CCCCHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------~~l~~~~~~~i~~QIl~a 133 (720)
+..+|..+|.+++||||+++++ ++.+.. ..|++||| .+++|.+++.... ..+++..++.++.||+.|
T Consensus 54 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 129 (275)
T cd05046 54 EFRRELDMFRKLSHKNVVRLLG-LCREAE---PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALG 129 (275)
T ss_pred HHHHHHHHHHhcCCcceeeeEE-EECCCC---cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHH
Confidence 3446788999999999999999 554433 56999999 8899999994432 158999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||+.||+||||||+||+++.++.++++|||.+...... .+
T Consensus 130 l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~----------------------------------~~--- 172 (275)
T cd05046 130 MDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNS----------------------------------EY--- 172 (275)
T ss_pred HHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcc----------------------------------cc---
Confidence 99999999999999999999999999999888876321100 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
. ......++..|+|||.+.+..++.++|
T Consensus 173 -----------~-----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~D 200 (275)
T cd05046 173 -----------Y-----------------------------------------KLRNALIPLRWLAPEAVQEDDFSTKSD 200 (275)
T ss_pred -----------c-----------------------------------------ccCCceeEEeecChhhhccCCCCchhh
Confidence 0 000124567799999998888899999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|+|++ ||...... .....+.....+.......|. ..+++.+||..+|.+||++.+++.
T Consensus 201 i~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~ 271 (275)
T cd05046 201 VWSFGVLMWEVFTQGELPFYGLSDE-EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271 (275)
T ss_pred HHHHHHHHHHHHhCCCCCccccchH-HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999997 56443332 333344433332222233444 459999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=247.51 Aligned_cols=204 Identities=14% Similarity=0.101 Sum_probs=157.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.. ...+++||| .+++|.+++......+++..+..++.||+.||+|||++|
T Consensus 55 ~~~~e~~~l~~l~h~~i~~~~~-~~~~----~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 129 (279)
T cd05057 55 EILDEAYVMASVDHPHVVRLLG-ICLS----SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR 129 (279)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEec----CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 5544 257999999 899999999765556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.++....... -+
T Consensus 130 i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~--------------------------------~~----------- 166 (279)
T cd05057 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK--------------------------------EY----------- 166 (279)
T ss_pred EEecccCcceEEEcCCCeEEECCCcccccccCccc--------------------------------ce-----------
Confidence 99999999999999999999999988743211100 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+....++.++|||||||++
T Consensus 167 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 201 (279)
T cd05057 167 ---------------------------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTV 201 (279)
T ss_pred ---------------------------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHH
Confidence 00001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+......+..........+++.+||..+|..||++.++++
T Consensus 202 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 202 WELMTFGAKPYEGIPAV-EIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HHHhcCCCCCCCCCCHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99997 55444332 333344433333332333455669999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=247.58 Aligned_cols=206 Identities=20% Similarity=0.266 Sum_probs=155.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
..|..++..++||||+++++ ++... ..++++|||.+++|.+++.+....+++..++.++.||+.||.|||++||+|
T Consensus 46 ~~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 121 (282)
T cd07829 46 LREISLLKELKHPNIVKLLD-VIHTE---RKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILH 121 (282)
T ss_pred HHHHHHHHhcCCCCHHHHHh-hhhcC---CceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 36777899999999999999 44443 367999999667999999665456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||+|+||+++.++.++|+|||.+........ .+
T Consensus 122 ~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--------------------------------~~-------------- 155 (282)
T cd07829 122 RDLKPQNILINRDGVLKLADFGLARAFGIPLR--------------------------------TY-------------- 155 (282)
T ss_pred CCCChheEEEcCCCCEEEecCCcccccCCCcc--------------------------------cc--------------
Confidence 99999999999999999999988743211100 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
....++..|+|||.+.+. .++.++|||||||++||
T Consensus 156 --------------------------------------------~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~ 191 (282)
T cd07829 156 --------------------------------------------THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAE 191 (282)
T ss_pred --------------------------------------------CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHH
Confidence 002457789999999776 68999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhh-------------------cCCCCc--------cccccCchHHHHHHHcCCCCCCCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLR-------------------HRVLPP--------QLLLKFPKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~-------------------~~~~p~--------~~~~~~p~~~~Li~~~L~~dP~~Rp 353 (720)
|++ ||.............. ...++. .+....+...+|+.+||..+|++||
T Consensus 192 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 271 (282)
T cd07829 192 MITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI 271 (282)
T ss_pred HHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCC
Confidence 999 4544322211111100 001110 0111223456999999999999999
Q ss_pred ChHHHHcCccc
Q 004989 354 KMGELLQSEFL 364 (720)
Q Consensus 354 ta~eiL~hp~~ 364 (720)
++.+++.||||
T Consensus 272 ~~~~~l~~p~~ 282 (282)
T cd07829 272 SAKEALKHPYF 282 (282)
T ss_pred CHHHHhhCcCC
Confidence 99999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=249.86 Aligned_cols=210 Identities=17% Similarity=0.218 Sum_probs=157.6
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..+|.++ +||||+++++ +++.+. .+|++||| .+++|.+++... ..+++..+..++.||+.||.|||+.|
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ 125 (290)
T cd05613 51 TRTERQVLEHIRQSPFLVTLHY-AFQTDT---KLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLG 125 (290)
T ss_pred HHHHHHHHHhcccCCChhceee-EeecCC---eEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 34677788888 5999999998 555443 57999999 899999999554 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+|||++.++.++|+|||++.........
T Consensus 126 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------- 161 (290)
T cd05613 126 IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE-------------------------------------------- 161 (290)
T ss_pred eeccCCCHHHeEECCCCCEEEeeCccceeccccccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCccccchhhhc
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGv 299 (720)
......|+..|+|||.+.+. .++.++|||||||
T Consensus 162 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~ 196 (290)
T cd05613 162 ---------------------------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGV 196 (290)
T ss_pred ---------------------------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHH
Confidence 00013578899999998754 3788999999999
Q ss_pred hhhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004989 300 LLFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
++|+|++ ||.... ........+.... ++......+...+|+.+||..+|++|| ++.+++.||||....
T Consensus 197 ~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 197 LMYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHHHHhcCCCCCCcCCccccHHHHHHHhhccC-CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 9999999 453211 1112222222221 221122334456999999999999997 899999999998864
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=250.52 Aligned_cols=218 Identities=21% Similarity=0.300 Sum_probs=172.7
Q ss_pred hhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q 004989 69 VELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 146 (720)
Q Consensus 69 ~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrD 146 (720)
.+|+- -+-|.++++.. +|+.-+ .+|+|||| .||+|.-.|.+-++ +.+..+..|+..|+-||-|||++|||.||
T Consensus 401 rvLAL~~kppFL~qlHS-cFQTmD---RLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~kgIiYRD 475 (683)
T KOG0696|consen 401 RVLALPGKPPFLVQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSKGIIYRD 475 (683)
T ss_pred hheecCCCCchHHHHHH-Hhhhhh---heeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcCCeeeee
Confidence 34544 34677788887 565544 57999999 99999988866665 99999999999999999999999999999
Q ss_pred CCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccc
Q 004989 147 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 147 LKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
||.+||||+.+|++||+|||+|+.--.+ -
T Consensus 476 LKLDNvmLd~eGHiKi~DFGmcKEni~~-------------------------------------~-------------- 504 (683)
T KOG0696|consen 476 LKLDNVMLDSEGHIKIADFGMCKENIFD-------------------------------------G-------------- 504 (683)
T ss_pred ccccceEeccCCceEeeecccccccccC-------------------------------------C--------------
Confidence 9999999999999999999998432111 0
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc
Q 004989 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt 306 (720)
.+....+|||.|+|||++...+|+.++|+||+||+|||||.
T Consensus 505 ---------------------------------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmla 545 (683)
T KOG0696|consen 505 ---------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 545 (683)
T ss_pred ---------------------------------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHc
Confidence 00112689999999999999999999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCC-----hHHHHcCcccCCC-ccchHHHHH
Q 004989 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPK-----MGELLQSEFLNEP-RDSMEEREA 376 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~-~~~l~e~~~ 376 (720)
||.+.++.........+....|. ..++++ ++|..+|.+.|.+|.. -.+|-.||||+.. ++.++.++.
T Consensus 546 GQpPFdGeDE~elF~aI~ehnvsyPK---slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~ei 622 (683)
T KOG0696|consen 546 GQPPFDGEDEDELFQAIMEHNVSYPK---SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREI 622 (683)
T ss_pred CCCCCCCCCHHHHHHHHHHccCcCcc---cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccC
Confidence 88888776544444444443322 335555 9999999999999963 4678899999977 667777776
Q ss_pred HHHHhhhh
Q 004989 377 AIELREQI 384 (720)
Q Consensus 377 ~~~~~e~~ 384 (720)
++++.+..
T Consensus 623 qPPfkPk~ 630 (683)
T KOG0696|consen 623 QPPFKPKI 630 (683)
T ss_pred CCCCCCcc
Confidence 66666655
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=244.55 Aligned_cols=203 Identities=14% Similarity=0.151 Sum_probs=154.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++++++||||+++++ ++.... ..+++||| .+++|.+++... +..+++..++.++.||+.||.|||++|
T Consensus 48 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~ 123 (261)
T cd05034 48 FLQEAQIMKKLRHDKLVQLYA-VCSEEE---PIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN 123 (261)
T ss_pred HHHHHHHHhhCCCCCEeeeee-eeecCC---ceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346778999999999999999 444432 57999999 899999999543 346899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++++|||.+...+.....
T Consensus 124 i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-------------------------------------------- 159 (261)
T cd05034 124 YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT-------------------------------------------- 159 (261)
T ss_pred cccCCcchheEEEcCCCCEEECccccceeccchhhh--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 160 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il 194 (261)
T cd05034 160 ---------------------------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILL 194 (261)
T ss_pred ---------------------------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHH
Confidence 00001235679999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+......+......+...+++.+||..+|.+||+++++++
T Consensus 195 ~~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 195 TEIVTYGRVPYPGMTNR-EVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99997 56544332 333444333222222222344569999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-27 Score=242.84 Aligned_cols=201 Identities=13% Similarity=0.137 Sum_probs=152.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+++.++|+||+++++ ++.. ..++++||| .+++|.+++.+ ....++...++.++.||+.||.|||+.|+
T Consensus 49 ~~e~~~l~~l~~~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 123 (260)
T cd05073 49 LAEANVMKTLQHDKLVKLHA-VVTK----EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 123 (260)
T ss_pred HHHHHHHHhcCCCCcceEEE-EEcC----CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 35677899999999999999 4433 257999999 78999999954 34457889999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++..+.++|+|||.+.........
T Consensus 124 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--------------------------------------------- 158 (260)
T cd05073 124 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYT--------------------------------------------- 158 (260)
T ss_pred cccccCcceEEEcCCCcEEECCCcceeeccCCCcc---------------------------------------------
Confidence 99999999999999999999988877332110000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||++.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05073 159 --------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLM 194 (260)
T ss_pred --------------------------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHH
Confidence 000023466799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... .....+......+..........+++.+||+++|++||++.+++.
T Consensus 195 ~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 195 EIVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHhcCCCCCCCCCHH-HHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 9998 56544332 333344433322222223334559999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-28 Score=240.74 Aligned_cols=229 Identities=17% Similarity=0.186 Sum_probs=173.7
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCC
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSV 118 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l 118 (720)
..-+++||...-...+..+++.+-|. +++.-+.||||++||+.|..++ +|+.||++..+|..+.+ -....+
T Consensus 90 ~~mAVKrIr~~n~~keq~rll~e~d~-~mks~~cp~IVkfyGa~F~EGd----cWiCMELMd~SlDklYk~vy~vq~~~i 164 (361)
T KOG1006|consen 90 KLMAVKRIRSNNIEKEQKRLLMEHDT-VMKSSNCPNIVKFYGALFSEGD----CWICMELMDISLDKLYKRVYSVQKSRI 164 (361)
T ss_pred cEEEEEEeeeccchHHHHHHHHHHHH-HHhhcCCcHHHHHhhhhhcCCc----eeeeHHHHhhhHHHHHHHHHHHHhccC
Confidence 34577788777776666777777665 4555689999999998886664 79999999889877652 123448
Q ss_pred CHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchh
Q 004989 119 DVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (720)
+|...-+|..-.+.||+||-. ..|||||+||+|||++..|.|||||||.|-+.-
T Consensus 165 pE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv------------------------- 219 (361)
T KOG1006|consen 165 PENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV------------------------- 219 (361)
T ss_pred cHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH-------------------------
Confidence 999999999999999999996 689999999999999999999999999982210
Q ss_pred hhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcc
Q 004989 198 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277 (720)
Q Consensus 198 ~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y 277 (720)
|- . ..+.-.|...|
T Consensus 220 -----------~S-i------------------------------------------------------AkT~daGCrpY 233 (361)
T KOG1006|consen 220 -----------DS-I------------------------------------------------------AKTVDAGCRPY 233 (361)
T ss_pred -----------HH-H------------------------------------------------------HhhhccCCccc
Confidence 00 0 01113678899
Q ss_pred cCcccccCC--CCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-----ccCchHHHHHHHcCCC
Q 004989 278 ASPEELAGA--PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-----LKFPKEASFCLWLLHP 347 (720)
Q Consensus 278 ~APE~l~~~--~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-----~~~p~~~~Li~~~L~~ 347 (720)
||||-+... .|+-+||+||||++|||+.| ||..++...+....+..+.+|.-.. ....+...||.-||.+
T Consensus 234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~K 313 (361)
T KOG1006|consen 234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIK 313 (361)
T ss_pred cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhc
Confidence 999999543 38999999999999999999 5555544444333343443332211 1334556999999999
Q ss_pred CCCCCCChHHHHcCcccCCC
Q 004989 348 EPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~ 367 (720)
|-+.||...+++.+||+...
T Consensus 314 d~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 314 DRSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred ccccCcchhhhhcCchhhhh
Confidence 99999999999999999876
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-27 Score=258.52 Aligned_cols=205 Identities=15% Similarity=0.176 Sum_probs=154.9
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------------------
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------- 115 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------------- 115 (720)
..+|..+|.++. |||||++++ .+.... .+++|||| .+++|.++|.+..
T Consensus 87 ~~~E~~~l~~l~~H~niv~~~~-~~~~~~---~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (401)
T cd05107 87 LMSELKIMSHLGPHLNIVNLLG-ACTKGG---PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLS 162 (401)
T ss_pred HHHHHHHHHhcCCCCCeEEEEE-EEccCC---CcEEEEeccCCCcHHHHHHhccccchhhhccccccccccccccccccc
Confidence 347888999997 999999999 454433 57999999 9999999994321
Q ss_pred -----------------------------------------------------------------------CCCCHHHHH
Q 004989 116 -----------------------------------------------------------------------RSVDVYECL 124 (720)
Q Consensus 116 -----------------------------------------------------------------------~~l~~~~~~ 124 (720)
..+++..++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 242 (401)
T cd05107 163 QRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLV 242 (401)
T ss_pred ccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHH
Confidence 135677889
Q ss_pred HHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhc
Q 004989 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 125 ~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
.|+.||+.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 243 ~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~----------------------------- 293 (401)
T cd05107 243 GFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDS----------------------------- 293 (401)
T ss_pred HHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccc-----------------------------
Confidence 999999999999999999999999999999999999999999874321110
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc
Q 004989 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
.+ .......+++.|+|||.+.
T Consensus 294 ----~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~ 314 (401)
T cd05107 294 ----NY-------------------------------------------------------ISKGSTFLPLKWMAPESIF 314 (401)
T ss_pred ----cc-------------------------------------------------------ccCCCcCCCCceeChHHhc
Confidence 00 0000124678899999998
Q ss_pred CCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 285 GAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 285 ~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+..++.++|||||||++|||++ ||............+..+..++......+...+|+.+||+++|.+||++.+|++
T Consensus 315 ~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~ 394 (401)
T cd05107 315 NNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH 394 (401)
T ss_pred CCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8889999999999999999997 565443333333334333222222223345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=243.43 Aligned_cols=208 Identities=21% Similarity=0.225 Sum_probs=152.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++..+.||||+++++ ++... .....+++||| .+++|.+++......+++..++.++.||+.||.|||+.||
T Consensus 53 ~~~ei~~l~~l~~~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 130 (284)
T cd05038 53 FEREIEILRTLDHENIVKYKG-VCEKP-GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRY 130 (284)
T ss_pred HHHHHHHHHhCCCCChheEEe-eeecC-CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346677899999999999998 44432 23357999999 8999999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+....... ++
T Consensus 131 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~------------ 165 (284)
T cd05038 131 IHRDLAARNILVESEDLVKISDFGLAKVLPEDK---------------------------------DY------------ 165 (284)
T ss_pred ecCCCCHHhEEEcCCCCEEEcccccccccccCC---------------------------------cc------------
Confidence 999999999999999999999998874332110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.. ......++..|+|||.+.+..++.++|||||||++|
T Consensus 166 -----------------------------------------~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~ 203 (284)
T cd05038 166 -----------------------------------------YY-VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLY 203 (284)
T ss_pred -----------------------------------------ee-ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhh
Confidence 00 000013456799999998888999999999999999
Q ss_pred hccc---cCCCCchH--------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt---pf~~~~~~--------------~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... ......+......+..........+|+.+||.++|.+|||+.|+++
T Consensus 204 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 204 ELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred eeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 9999 43322111 1111122222211111112234559999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-27 Score=245.96 Aligned_cols=211 Identities=18% Similarity=0.214 Sum_probs=157.2
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++.++ +||||+++++ .+..+. .+|+|||| .+++|.+++... ..+++..++.++.|++.||.|||+.
T Consensus 50 ~~~~E~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~ 124 (288)
T cd05583 50 HTRTERQVLEAVRRCPFLVTLHY-AFQTDT---KLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQL 124 (288)
T ss_pred HHHHHHHHHHhccCCcchhhhhe-eeecCC---EEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 334677788888 6999999998 444443 57999999 889999999544 3489999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++||||||+||+++.++.++++|||++..+.... ..
T Consensus 125 ~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~---------- 161 (288)
T cd05583 125 GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE---------------------------------EE---------- 161 (288)
T ss_pred CeeccCCCHHHeEECCCCCEEEEECcccccccccc---------------------------------cc----------
Confidence 99999999999999999999999999874321110 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchhhh
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLG 298 (720)
......|+..|+|||.+.+.. .+.++||||||
T Consensus 162 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG 195 (288)
T cd05583 162 ----------------------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLG 195 (288)
T ss_pred ----------------------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHH
Confidence 000135788999999987765 78899999999
Q ss_pred chhhhccc---cCCCCch---HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCCc
Q 004989 299 VLLFELFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 368 (720)
Q Consensus 299 vll~eLlt---pf~~~~~---~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt---a~eiL~hp~~~~~~ 368 (720)
+++|||++ ||..... .......+.... ++......+...+|+.+||+.+|++||| +.++|+||||+...
T Consensus 196 ~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 196 VLTFELLTGASPFTVDGEQNSQSEISRRILKSK-PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred HHHHHHHhCCCCcccCcccchHHHHHHHHHccC-CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 99999999 5532211 111112222221 2221222345569999999999999998 56789999998873
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-27 Score=268.24 Aligned_cols=188 Identities=16% Similarity=0.200 Sum_probs=129.2
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCC-------------------CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 004989 93 IDPFVHAIEW-GDVSLRQWLDKPKRS-------------------VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152 (720)
Q Consensus 93 ~~~~~lv~E~-~ggsL~~~L~~~~~~-------------------l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI 152 (720)
...++++||| .+++|.+++...... .....+..|+.||+.||.|||++||+||||||+||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI 286 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI 286 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence 3468999999 899999998543211 12345678999999999999999999999999999
Q ss_pred EEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCc
Q 004989 153 VMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 153 Ll~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
|++. ++.+||+|||++....... +.
T Consensus 287 Ll~~~~~~~KL~DFGlA~~l~~~~---------------------------------~~--------------------- 312 (566)
T PLN03225 287 IFSEGSGSFKIIDLGAAADLRVGI---------------------------------NY--------------------- 312 (566)
T ss_pred EEeCCCCcEEEEeCCCcccccccc---------------------------------cc---------------------
Confidence 9985 5789999999884321100 00
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----------------------CC
Q 004989 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----------------------VS 289 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----------------------~s 289 (720)
.....+||+.|+|||.+.... ++
T Consensus 313 -----------------------------------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 313 -----------------------------------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred -----------------------------------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 001146788999999764322 34
Q ss_pred ccccchhhhchhhhccccCCCC-chHHHHHHHhhcCCC---------Ccccccc-----------CchHHHHHHHcCCCC
Q 004989 290 CASDIYRLGVLLFELFCPFSTG-EEKTRTMSSLRHRVL---------PPQLLLK-----------FPKEASFCLWLLHPE 348 (720)
Q Consensus 290 ~~sDIwSLGvll~eLltpf~~~-~~~~~~~~~l~~~~~---------p~~~~~~-----------~p~~~~Li~~~L~~d 348 (720)
.++|||||||+||||++|.... .........+..... ++..... .....+||.+||++|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 4569999999999999954332 222222222221111 1110000 111238999999999
Q ss_pred CCCCCChHHHHcCcccCCCcc
Q 004989 349 PSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~ 369 (720)
|.+|||+.++|+||||.....
T Consensus 438 P~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 438 GRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred cccCCCHHHHhCCcCcCCCCc
Confidence 999999999999999987633
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=246.79 Aligned_cols=206 Identities=14% Similarity=0.105 Sum_probs=149.6
Q ss_pred hhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 68 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 68 ~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
...+..+.|+||+++++............++++|+...++.+.+... ...++..++.++.||+.||.|||++||+||||
T Consensus 74 ~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDi 152 (294)
T PHA02882 74 WKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDI 152 (294)
T ss_pred HHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 34566789999999998444444444456888888667888877443 33688899999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.++|+|||+++.+...... ...
T Consensus 153 Kp~Nill~~~~~~~l~DFGla~~~~~~~~~------------------------------~~~----------------- 185 (294)
T PHA02882 153 KPENIMVDGNNRGYIIDYGIASHFIIHGKH------------------------------IEY----------------- 185 (294)
T ss_pred CHHHEEEcCCCcEEEEEcCCceeeccCCcc------------------------------ccc-----------------
Confidence 999999999999999999988543211000 000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
.........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 186 ------------------------------------~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g 229 (294)
T PHA02882 186 ------------------------------------SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGI 229 (294)
T ss_pred ------------------------------------ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 0000011368999999999999989999999999999999998
Q ss_pred --cCCCCchHHHH--------HHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 307 --PFSTGEEKTRT--------MSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 --pf~~~~~~~~~--------~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||......... ...+..... .....|+ ..+++..|+..+|++||++.++++
T Consensus 230 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 230 KLPWKGFGHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCCCCccccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 77654222111 122222111 1122344 449999999999999999999975
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=240.52 Aligned_cols=208 Identities=13% Similarity=0.082 Sum_probs=152.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|+.++||||+++++.+..... .....++++|| .+++|.+++.. ....++...++.++.||+.||+
T Consensus 48 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~ 127 (273)
T cd05074 48 FLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGME 127 (273)
T ss_pred HHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3467789999999999999994333222 12245788999 88999988732 1224789999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||+.||+||||||+||+++.++.++++|||.+......... .
T Consensus 128 ~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~----- 170 (273)
T cd05074 128 YLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYY--------------------------------R----- 170 (273)
T ss_pred HHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcce--------------------------------e-----
Confidence 999999999999999999999999999999877432111000 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
......+++.|++||.+.+..++.++|||
T Consensus 171 ---------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~ 199 (273)
T cd05074 171 ---------------------------------------------------QGCASKLPVKWLALESLADNVYTTHSDVW 199 (273)
T ss_pred ---------------------------------------------------cCCCccCchhhcCHhHHhcCccchhhhhH
Confidence 00001345679999999888899999999
Q ss_pred hhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..... ......+.............+...+++.+||..+|++||++.++++
T Consensus 200 slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 200 AFGVTMWEIMTRGQTPYAGVEN-SEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHHHHHHhhCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999997 4443333 2333333333222222233355569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-27 Score=258.36 Aligned_cols=201 Identities=18% Similarity=0.243 Sum_probs=158.2
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|...|++-+|.||+=+.| ++..+. +.||.-+ .|-+|+.+|.-...+|.....+.|++||++|++|||.++|||
T Consensus 437 nEVa~lkkTRH~NIlLFMG-~~~~p~----~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIH 511 (678)
T KOG0193|consen 437 NEVAVLKKTRHENILLFMG-ACMNPP----LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIH 511 (678)
T ss_pred HHHHHHhhcchhhheeeeh-hhcCCc----eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 6778999999999999999 554442 3788888 999999999666667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..||+|.+++.|||.|||++.....-. ++-
T Consensus 512 rDLKSnNIFl~~~~kVkIgDFGLatvk~~w~--------------------------------g~~-------------- 545 (678)
T KOG0193|consen 512 RDLKSNNIFLHEDLKVKIGDFGLATVKTRWS--------------------------------GEQ-------------- 545 (678)
T ss_pred hhccccceEEccCCcEEEecccceeeeeeec--------------------------------ccc--------------
Confidence 9999999999999999998887763211100 000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC---CCCccccchhhhchh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll 301 (720)
......|...|||||+++.. +|++.+|||||||++
T Consensus 546 ------------------------------------------q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~ 583 (678)
T KOG0193|consen 546 ------------------------------------------QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW 583 (678)
T ss_pred ------------------------------------------ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHH
Confidence 00012467889999999744 499999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchH-HHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||. ......++-.+..+.+.+. .....|++ .+|+..||.+++++||...+||.
T Consensus 584 YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 584 YELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred HHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 99999 887 4444455555555644443 34566744 49999999999999999999986
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=240.10 Aligned_cols=201 Identities=15% Similarity=0.226 Sum_probs=153.2
Q ss_pred chhhhhhcc-cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~L~-~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
...|..++. .++||||+++++ ++..+. ..+++||| .|++|.+++. .....+++..++.++.||+.||.|||
T Consensus 55 ~~~e~~~l~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 130 (269)
T cd08528 55 IVSEVTIIKEQLRHPNIVRYYK-TFLEND---RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH 130 (269)
T ss_pred HHHHHHHHhhcCCCCCeeeEEe-eEccCC---eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 335666665 489999999999 444432 67999999 8999999872 34455899999999999999999999
Q ss_pred H-CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 S-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+ .||+|+||||+||+++.++.++|+|||.+.......
T Consensus 131 ~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------ 168 (269)
T cd08528 131 KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES------------------------------------------ 168 (269)
T ss_pred cCCceeecCCCHHHEEECCCCcEEEecccceeeccccc------------------------------------------
Confidence 6 789999999999999999999999998873321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......|+..|+|||.+.+..++.++|||||
T Consensus 169 -------------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~sl 199 (269)
T cd08528 169 -------------------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAF 199 (269)
T ss_pred -------------------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHH
Confidence 0001357888999999998889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||...... .....+.....++... ...+...+|+.+||..||++||++.|+..
T Consensus 200 G~ll~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 200 GCILYQMCTLQPPFYSTNML-SLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred HHHHHHHHhCCCcccccCHH-HHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 999999999 55443332 2333333333333222 22345569999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-27 Score=239.63 Aligned_cols=217 Identities=18% Similarity=0.289 Sum_probs=166.9
Q ss_pred cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 004989 73 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 151 (720)
Q Consensus 73 ~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~N 151 (720)
.-+||.+|.+.. +|+.+. .+++|.|| .||+|.-.+ +..++++++.++.|-..|+.||.|||++|||.||||.+|
T Consensus 307 asn~pflvglhs-cfqtes---rlffvieyv~ggdlmfhm-qrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldn 381 (593)
T KOG0695|consen 307 ASNNPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDN 381 (593)
T ss_pred ccCCCeEEehhh-hhcccc---eEEEEEEEecCcceeeeh-hhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccc
Confidence 468999999999 776665 56999999 999998777 445669999999999999999999999999999999999
Q ss_pred EEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCc
Q 004989 152 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 152 ILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
+|++..|++||.|+|.|+.--.+ +|.
T Consensus 382 vlldaeghikltdygmcke~l~~---------------------------------gd~--------------------- 407 (593)
T KOG0695|consen 382 VLLDAEGHIKLTDYGMCKEGLGP---------------------------------GDT--------------------- 407 (593)
T ss_pred eEEccCCceeecccchhhcCCCC---------------------------------Ccc---------------------
Confidence 99999999999999999542111 221
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cC
Q 004989 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 308 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf 308 (720)
....+|||.|+|||++++..|++++|+|+|||++|||+. ||
T Consensus 408 ------------------------------------tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspf 451 (593)
T KOG0695|consen 408 ------------------------------------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 451 (593)
T ss_pred ------------------------------------cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCc
Confidence 012689999999999999999999999999999999998 66
Q ss_pred CC------C-chHHHHHHHhh-cCCCCccccccCchHHHHHHHcCCCCCCCCC------ChHHHHcCcccCCC-ccchHH
Q 004989 309 ST------G-EEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRP------KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 309 ~~------~-~~~~~~~~~l~-~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp------ta~eiL~hp~~~~~-~~~l~e 373 (720)
.- . +...-.+..+. +.+.-|. +..-+...+++..|.+||.+|. ...++..|+||+.. ++.+++
T Consensus 452 divgm~n~d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 452 DIVGMDNPDMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred ceecCCCcccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhh
Confidence 42 1 12222233333 3332222 2234556899999999999995 47899999999976 455555
Q ss_pred HHHHHHHhhhhhh
Q 004989 374 REAAIELREQIDE 386 (720)
Q Consensus 374 ~~~~~~~~e~~~~ 386 (720)
+.-.+++.+....
T Consensus 530 k~v~ppf~p~i~~ 542 (593)
T KOG0695|consen 530 KQVLPPFQPQITD 542 (593)
T ss_pred cccCCCCCCcccc
Confidence 5555555555544
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-27 Score=226.84 Aligned_cols=208 Identities=15% Similarity=0.216 Sum_probs=156.9
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..||..||..|. ||||++++++ ..+.... ...+++|| ...+...+. ..++..+++.++.||+.||+|||++|
T Consensus 79 IkREikIL~nL~gg~NIi~L~Di-V~Dp~Sk-tpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~G 152 (338)
T KOG0668|consen 79 IKREIKILQNLRGGPNIIKLLDI-VKDPESK-TPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMG 152 (338)
T ss_pred HHHHHHHHHhccCCCCeeehhhh-hcCcccc-CchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcC
Confidence 338999999988 9999999994 4343333 45789999 888887755 34889999999999999999999999
Q ss_pred ceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 142 IVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+|||+||.|++|+. .-.++|||+|+|..+... .++
T Consensus 153 ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~---------------------------------~eY---------- 189 (338)
T KOG0668|consen 153 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG---------------------------------KEY---------- 189 (338)
T ss_pred cccccCCcceeeechhhceeeeeecchHhhcCCC---------------------------------cee----------
Confidence 999999999999994 456899999887332110 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
...+.+..|.-||++..-. |+.+-|+|||||
T Consensus 190 ------------------------------------------------nVRVASRyfKGPELLVdy~~YDYSLD~WS~Gc 221 (338)
T KOG0668|consen 190 ------------------------------------------------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 221 (338)
T ss_pred ------------------------------------------------eeeeehhhcCCchheeechhccccHHHHHHHH
Confidence 1146678899999997766 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh-------------c--CCCCccccc---------------------cCchHHHH
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLR-------------H--RVLPPQLLL---------------------KFPKEASF 340 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~-------------~--~~~p~~~~~---------------------~~p~~~~L 340 (720)
+|..|+. ||.-..........+. + -.++|.+.. ..|+..||
T Consensus 222 mlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDl 301 (338)
T KOG0668|consen 222 MLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDL 301 (338)
T ss_pred HHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHH
Confidence 9999998 8765432222111111 1 123333221 12556699
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 341 CLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+.++|.+|-.+|+||.|++.||||....
T Consensus 302 ldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 302 LDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred HHHHHhhccccccchHHHhcCchHHHHH
Confidence 9999999999999999999999998763
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-26 Score=231.63 Aligned_cols=205 Identities=23% Similarity=0.288 Sum_probs=160.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|...+++++|+||+++++ .+... ...++++|| .+++|.+++..... ++...++.++.+|+.+|.|||+.||
T Consensus 34 ~~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i 108 (244)
T smart00220 34 ILREISILKKLKHPNIVRLYD-VFEDE---DKLYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGI 108 (244)
T ss_pred HHHHHHHHHhCCCCcHHHHHh-heeeC---CEEEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCe
Confidence 336667888899999999999 44333 267999999 77799999955433 8999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|.||+++.++.++++|||.+.......
T Consensus 109 ~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----------------------------------------------- 141 (244)
T smart00220 109 IHRDLKPENILLDEDGHVKLADFGLARQLDPGG----------------------------------------------- 141 (244)
T ss_pred ecCCcCHHHeEECCCCcEEEccccceeeecccc-----------------------------------------------
Confidence 999999999999999999999998873321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++||||||+++|
T Consensus 142 --------------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~ 177 (244)
T smart00220 142 --------------------------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILY 177 (244)
T ss_pred --------------------------------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHH
Confidence 000135688899999998888899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccc--cCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||............+.....+..... ......+++.+||..+|++||++.++++||||
T Consensus 178 ~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 178 ELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 9999 66553344444444444433332222 22345699999999999999999999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=251.88 Aligned_cols=212 Identities=17% Similarity=0.238 Sum_probs=163.7
Q ss_pred chhhhhhccc-CCCCCceeccccee-ecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTH-GDHLRNQGGLSGVC-ENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~-l~HpnIV~l~~~~~-~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.|.|..+|.. -+|||++.+|++++ .+....+++|+|||| .|||.-|++++ .+..+.|..+..|++.++.||.+||.
T Consensus 62 iE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~ 141 (953)
T KOG0587|consen 62 IELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN 141 (953)
T ss_pred HHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh
Confidence 3344445444 67999999999666 344566789999999 99999998833 36669999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
..++|||||-.|||++.++.|||+|||++.+..+..
T Consensus 142 nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~-------------------------------------------- 177 (953)
T KOG0587|consen 142 NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV-------------------------------------------- 177 (953)
T ss_pred cceeeecccCceEEEeccCcEEEeeeeeeeeeeccc--------------------------------------------
Confidence 999999999999999999999999999884421110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-----CCccccc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sDI 294 (720)
| +....+|||.|||||++...+ |+..+|+
T Consensus 178 -------------------------------g---------------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~ 211 (953)
T KOG0587|consen 178 -------------------------------G---------------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDL 211 (953)
T ss_pred -------------------------------c---------------cccCcCCCcccccceeeecccCCCCCcccccch
Confidence 0 112258999999999996543 7889999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccc--cccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++..||.- |+....+.-..+... +.+||.+ +..|.+.. +||..||++|-.+||++.++|+|||++..
T Consensus 212 WsLGITaIEladG~PPl~DmHPmraLF~Ip--RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 212 WSLGITAIEMAEGAPPLCDMHPMRALFLIP--RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred hhccceeehhcCCCCCccCcchhhhhccCC--CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 999999999998 333333332222222 2334443 34565554 99999999999999999999999999954
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=251.97 Aligned_cols=205 Identities=20% Similarity=0.250 Sum_probs=144.5
Q ss_pred ecCCCcccccccccCCccccccccc-CCCC---CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeec
Q 004989 14 IMEGSSDSAWQDSDSSRALNISGVS-DRNP---RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCEN 89 (720)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~ 89 (720)
.|.+...-.|...+..+..+.+.|- .+|. +.++++-+. ....-.-+-|--+|..+|.+++|||||++++ +-++
T Consensus 6 ~l~~~~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~--~~~~~r~~e~~~~EieilkKLnh~NIVk~f~-iee~ 82 (732)
T KOG4250|consen 6 VLTSGENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFN--KESSLRPRERWCREIEILKKLNHPNIVKLFD-IEET 82 (732)
T ss_pred ccccCCCcceeehhhhcCCccceeeeecccccccchhHHhhh--hhcccchHHHHHHHHHHHHHcCchhhhhhcc-cCCc
Confidence 3444555678886654433333222 2332 223333222 2222233334458999999999999999999 4433
Q ss_pred CC---CCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcc--CCc--
Q 004989 90 EA---AIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS--FNH-- 159 (720)
Q Consensus 90 ~~---~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~--~~~-- 159 (720)
.. -...-.++||| .||||+..|+++ ...|++.+++.++..++.||.|||.+|||||||||.||++-. +|+
T Consensus 83 ~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~I 162 (732)
T KOG4250|consen 83 KFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSI 162 (732)
T ss_pred cccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceE
Confidence 32 03345889999 999999999543 345999999999999999999999999999999999999863 233
Q ss_pred eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccc
Q 004989 160 VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLV 239 (720)
Q Consensus 160 vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~ 239 (720)
.||+|||.|+....++
T Consensus 163 yKLtDfG~Arel~d~s---------------------------------------------------------------- 178 (732)
T KOG4250|consen 163 YKLTDFGAARELDDNS---------------------------------------------------------------- 178 (732)
T ss_pred EeeecccccccCCCCC----------------------------------------------------------------
Confidence 5676666664432210
Q ss_pred cccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchhhhccc---cCCCCc
Q 004989 240 EGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGE 312 (720)
Q Consensus 240 ~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eLlt---pf~~~~ 312 (720)
.-+..+||+.|.+||++.. ..|+..+|.|||||++|++.| ||.+..
T Consensus 179 ---------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 179 ---------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred ---------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 0022689999999999984 779999999999999999999 666553
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-26 Score=246.09 Aligned_cols=203 Identities=19% Similarity=0.206 Sum_probs=163.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..-.|+.++.+++|||||+++| ++... ++|+|||+ .-|.|+.||..+...++......+.+||+.||.|||+..
T Consensus 437 kflqEa~iMrnfdHphIikLIG-v~~e~----P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr 511 (974)
T KOG4257|consen 437 KFLQEASIMRNFDHPHIIKLIG-VCVEQ----PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR 511 (974)
T ss_pred HHHHHHHHHHhCCCcchhheee-eeecc----ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc
Confidence 4448899999999999999999 55554 47999999 889999999777677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+|||||-..|||+.+...|||.|||+++-...+..-
T Consensus 512 fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY-------------------------------------------- 547 (974)
T KOG4257|consen 512 FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY-------------------------------------------- 547 (974)
T ss_pred hhhhhhhhhheeecCcceeeecccchhhhccccchh--------------------------------------------
Confidence 999999999999999999999888877433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. . ..... ..-|||||.++-..++.+||||-|||.+
T Consensus 548 -k-----------------------a------------S~~kL---------PIKWmaPESINfRrFTtASDVWMFgVCm 582 (974)
T KOG4257|consen 548 -K-----------------------A------------SRGKL---------PIKWMAPESINFRRFTTASDVWMFGVCM 582 (974)
T ss_pred -h-----------------------c------------ccccc---------ceeecCccccchhcccchhhHHHHHHHH
Confidence 0 0 00111 3469999999988999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++. ||.+-... ..+..+.++..+|..+..-|....|+.+||.+||.+||++.||..
T Consensus 583 WEIl~lGvkPfqgvkNs-DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 583 WEILSLGVKPFQGVKNS-DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHHHHhcCCcccccccc-ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 99998 88876554 344455566665555445455569999999999999999988863
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=242.57 Aligned_cols=201 Identities=20% Similarity=0.213 Sum_probs=162.1
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|+.++..+.|||+|+|++ +|..+. +|||+.|| +.|+|.+||+.-. ..++....+.++.||..|+.||..+++|
T Consensus 312 kEAAvMKeikHpNLVqLLG-VCT~Ep---PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFI 387 (1157)
T KOG4278|consen 312 KEAAVMKEIKHPNLVQLLG-VCTHEP---PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFI 387 (1157)
T ss_pred HHHHHHHhhcCccHHHHhh-hhccCC---CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 6778999999999999999 554443 68999999 9999999995543 3478888889999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||-..|.|+.++..||++|||+++....+...
T Consensus 388 HRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT---------------------------------------------- 421 (1157)
T KOG4278|consen 388 HRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT---------------------------------------------- 421 (1157)
T ss_pred hhhhhhhhccccccceEEeeccchhhhhcCCcee----------------------------------------------
Confidence 9999999999999999999888877443222110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+.. ...|| .-|.|||-|....++.++|||+|||+|||
T Consensus 422 ------------------------AHA----------GAKFP---------IKWTAPEsLAyNtFSiKSDVWAFGVLLWE 458 (1157)
T KOG4278|consen 422 ------------------------AHA----------GAKFP---------IKWTAPESLAYNTFSIKSDVWAFGVLLWE 458 (1157)
T ss_pred ------------------------ccc----------CccCc---------ccccCcccccccccccchhhHHHHHHHHH
Confidence 011 12233 35899999999999999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.| ||++.+- ...+..+.++.........-|+..+|++.||++.|++||+++||-+
T Consensus 459 IATYGMsPYPGidl-SqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 459 IATYGMSPYPGIDL-SQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HHhcCCCCCCCccH-HHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 999 7877544 3666666666655555566677779999999999999999999854
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.1e-25 Score=232.80 Aligned_cols=92 Identities=14% Similarity=0.053 Sum_probs=79.5
Q ss_pred hhhhhcccC--------CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHG--------DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 66 ~e~~~L~~l--------~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
-|+.+|.++ .-.+||+|++.|-..+.++.++|+|+|+.|.+|..|| ....+.++...++.|++||+.||+|
T Consensus 123 DEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdY 202 (590)
T KOG1290|consen 123 DEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDY 202 (590)
T ss_pred HHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHH
Confidence 455566653 2357999999888999999999999999999999999 4455669999999999999999999
Q ss_pred HHH-CCceeccCCCCcEEEccC
Q 004989 137 AHS-QGIVVHNVRPSCFVMSSF 157 (720)
Q Consensus 137 LHs-~gIvHrDLKP~NILl~~~ 157 (720)
||. .||||-||||+|||+...
T Consensus 203 LH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 203 LHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred HHHhcCccccCCCcceeeeecc
Confidence 997 599999999999999754
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-25 Score=231.40 Aligned_cols=214 Identities=16% Similarity=0.219 Sum_probs=160.1
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--CCc
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS--QGI 142 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs--~gI 142 (720)
||..|-..|+||.||++|+.+-.+.. .||-|+|| .|.+|.-||+++. .+++.+++.|+.||+.||.||.. -.|
T Consensus 516 REyrIHKeLDHpRIVKlYDyfslDtd---sFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEikpPI 591 (775)
T KOG1151|consen 516 REYRIHKELDHPRIVKLYDYFSLDTD---SFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEIKPPI 591 (775)
T ss_pred HHHhhhhccCcceeeeeeeeeeeccc---cceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence 77778899999999999994434433 58999999 9999999996554 48999999999999999999997 479
Q ss_pred eeccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 143 VVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||-||||.||||- ..|.+||.|||+++....++.. .+.|+--+
T Consensus 592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~------------------------------~vdGmeLT---- 637 (775)
T KOG1151|consen 592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYN------------------------------SVDGMELT---- 637 (775)
T ss_pred eeeccCCccEEEecCcccceeEeeecchhhhccCCccC------------------------------cccceeee----
Confidence 9999999999995 4578999988888664433211 11111000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC----CCCccccch
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIY 295 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sDIw 295 (720)
....||.||++||.+.-. ..+.++|||
T Consensus 638 -------------------------------------------------SQgAGTYWYLPPEcFvVgkePPKIsnKVDVW 668 (775)
T KOG1151|consen 638 -------------------------------------------------SQGAGTYWYLPPECFVVGKEPPKISNKVDVW 668 (775)
T ss_pred -------------------------------------------------cccCceeeecCcceeecCCCCCccccceeeE
Confidence 014789999999998544 279999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHH-----HhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMS-----SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~-----~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|||+|..+. ||........++. ....-.+|+. +-..+...+||++||.+--++|..+.++..||||..-
T Consensus 669 SvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh 747 (775)
T KOG1151|consen 669 SVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH 747 (775)
T ss_pred eeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence 99999999998 6765433222211 1111223333 2234555699999999999999999999999998763
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-26 Score=226.91 Aligned_cols=214 Identities=20% Similarity=0.249 Sum_probs=158.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCC---cEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAID---PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~---~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
|..+|..+|..++|.|++..++ +.+.. +.. .+|++.|+...+|...|-.+. .++...++-+++||+.||.|||+
T Consensus 98 rvFre~kmLcfFkHdNVLSaLD-ILQPp-h~dfFqEiYV~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHs 174 (449)
T KOG0664|consen 98 RVFREIKMLSSFRHDNVLSLLD-ILQPA-NPSFFQELYVLTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHT 174 (449)
T ss_pred HHHHHHHHHHhhccccHHHHHH-hcCCC-CchHHHHHHHHHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhh
Confidence 6668888999999999999999 33222 221 258889998889999885554 49999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||.||||||.|+|++++..+||||||+++....+..
T Consensus 175 A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~------------------------------------------- 211 (449)
T KOG0664|consen 175 ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR------------------------------------------- 211 (449)
T ss_pred cchhhccCCCccEEeccCceEEecccccccccchhhh-------------------------------------------
Confidence 9999999999999999999999988888754322100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
..| +..+-|-+|+|||++.|.. |+.++||||+|
T Consensus 212 --------------------------------------------~hM--TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVG 245 (449)
T KOG0664|consen 212 --------------------------------------------LNM--THEVVTQYYRAPELLMGARRYTGAVDIWSVG 245 (449)
T ss_pred --------------------------------------------hhh--HHHHHHHHhccHHHhhcchhhcCccceehhh
Confidence 000 1135688999999999987 99999999999
Q ss_pred chhhhccc---cCCCCch--------------HHHHHHH---------hhcCCCCccccccC---------chHHHHHHH
Q 004989 299 VLLFELFC---PFSTGEE--------------KTRTMSS---------LRHRVLPPQLLLKF---------PKEASFCLW 343 (720)
Q Consensus 299 vll~eLlt---pf~~~~~--------------~~~~~~~---------l~~~~~p~~~~~~~---------p~~~~Li~~ 343 (720)
||+.||+. -|....+ ..+.|.. ++....+|.+.-.+ -...+++..
T Consensus 246 CIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~ 325 (449)
T KOG0664|consen 246 CIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQK 325 (449)
T ss_pred HHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHH
Confidence 99999997 2322111 1111211 22222333322111 122388899
Q ss_pred cCCCCCCCCCChHHHHcCcccCCCc
Q 004989 344 LLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++||.+|.+.++++.|+++.+.+
T Consensus 326 ~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 326 LLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred HhCCCCcccccHhhhcccccccccc
Confidence 9999999999999999999987753
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-25 Score=247.88 Aligned_cols=204 Identities=16% Similarity=0.227 Sum_probs=164.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
-.-.|+.||.+++||||++|-|++-... +++|+.|| ++|+|..||+++.+.++..+..-+++.|+.|+.||-+.|
T Consensus 676 dFL~EAsIMGQFdHPNIIrLEGVVTks~----PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~ 751 (996)
T KOG0196|consen 676 DFLSEASIMGQFDHPNIIRLEGVVTKSK----PVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN 751 (996)
T ss_pred hhhhhhhhcccCCCCcEEEEEEEEecCc----eeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC
Confidence 3348999999999999999999554443 68999999 999999999888888999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+|||||-..|||++.+-..|+.|||+++....+ .
T Consensus 752 YVHRDLAARNILVNsnLvCKVsDFGLSRvledd-----------------------------------~----------- 785 (996)
T KOG0196|consen 752 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD-----------------------------------P----------- 785 (996)
T ss_pred chhhhhhhhheeeccceEEEeccccceeecccC-----------------------------------C-----------
Confidence 999999999999999999999888887533211 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
+..+...| ... ...|.|||.+...+++.+|||||+||+|
T Consensus 786 ----------------------~~~ytt~G----------GKI---------PiRWTAPEAIa~RKFTsASDVWSyGIVm 824 (996)
T KOG0196|consen 786 ----------------------EAAYTTLG----------GKI---------PIRWTAPEAIAYRKFTSASDVWSYGIVM 824 (996)
T ss_pred ----------------------CccccccC----------Ccc---------ceeecChhHhhhcccCchhhccccceEE
Confidence 00011111 111 4579999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcC-CCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~-~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||.++ ||...... ..++.+..+ .+||.. .+|... .|+++||++|-.+||++.+|+.
T Consensus 825 WEVmSyGERPYWdmSNQ-dVIkaIe~gyRLPpPm--DCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 825 WEVMSYGERPYWDMSNQ-DVIKAIEQGYRLPPPM--DCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred EEecccCCCcccccchH-HHHHHHHhccCCCCCC--CCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 99998 88877666 445555544 344432 455554 9999999999999999999986
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-25 Score=237.35 Aligned_cols=204 Identities=17% Similarity=0.262 Sum_probs=153.4
Q ss_pred hhhhhcccCC------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGD------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~L~~l~------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yL 137 (720)
+|..||.+|+ --|+|+||..|+. ..++|||+|-...+|+++|++.+. .|....++.|+.|++.||..|
T Consensus 477 ~EleiLkKL~~AD~Edk~Hclrl~r~F~h----knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklL 552 (752)
T KOG0670|consen 477 KELEILKKLNDADPEDKFHCLRLFRHFKH----KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLL 552 (752)
T ss_pred HHHHHHHHhhccCchhhhHHHHHHHHhhh----cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHH
Confidence 5667888776 3478898884433 337899999988899999976554 378889999999999999999
Q ss_pred HHCCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 138 HSQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
-..||+|.||||+|||++. .+.+||||||.|...+...+
T Consensus 553 K~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei---------------------------------------- 592 (752)
T KOG0670|consen 553 KKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI---------------------------------------- 592 (752)
T ss_pred HhcCeeecccCccceEeccCcceeeeccCccccccccccc----------------------------------------
Confidence 9999999999999999995 45689999998855433321
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchh
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
++++-+..|.|||++.|.+|++..|+||
T Consensus 593 ----------------------------------------------------tPYLVSRFYRaPEIiLG~~yd~~iD~WS 620 (752)
T KOG0670|consen 593 ----------------------------------------------------TPYLVSRFYRAPEIILGLPYDYPIDTWS 620 (752)
T ss_pred ----------------------------------------------------cHHHHHHhccCcceeecCcccCCcccee
Confidence 1235577899999999999999999999
Q ss_pred hhchhhhcccc---CCCCchH--HHHHHHhhcCCCCcc------------------------------------------
Q 004989 297 LGVLLFELFCP---FSTGEEK--TRTMSSLRHRVLPPQ------------------------------------------ 329 (720)
Q Consensus 297 LGvll~eLltp---f~~~~~~--~~~~~~l~~~~~p~~------------------------------------------ 329 (720)
+||+||||.|+ |++.... ...+..+. +.+|..
T Consensus 621 vgctLYElYtGkIlFpG~TNN~MLrl~me~K-Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtk 699 (752)
T KOG0670|consen 621 VGCTLYELYTGKILFPGRTNNQMLRLFMELK-GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTK 699 (752)
T ss_pred eceeeEEeeccceecCCCCcHHHHHHHHHhc-CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcch
Confidence 99999999993 5543222 11111111 111100
Q ss_pred -ccc------cCc--------hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 330 -LLL------KFP--------KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 330 -~~~------~~p--------~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+.. .+| ...+|+..||..||++|.|..++|.||||+.
T Consensus 700 dl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 700 DLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred hHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 000 011 1238999999999999999999999999985
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-25 Score=242.38 Aligned_cols=205 Identities=16% Similarity=0.154 Sum_probs=154.2
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~-l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+-..+|+.+|++++|||||++++++..++ ++++++|| ..|+|.+||.++..+ +.-.....|+.||+.|++||.+
T Consensus 580 ~~F~kEIkiLsqLkhPNIveLvGVC~~De----PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes 655 (807)
T KOG1094|consen 580 NDFLKEIKILSRLKHPNIVELLGVCVQDD----PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES 655 (807)
T ss_pred HHHHHHHHHHhccCCCCeeEEEeeeecCC----chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh
Confidence 34448899999999999999999555555 57999999 889999999555333 3556677799999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.++|||||.+.|+|++.++++||+|||.++..-. +|+
T Consensus 656 ~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys----------------------------------g~y--------- 692 (807)
T KOG1094|consen 656 LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS----------------------------------GDY--------- 692 (807)
T ss_pred hchhhccccccceeecCcccEEecCccccccccc----------------------------------CCc---------
Confidence 9999999999999999999999999988853211 111
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.+. +...+-...|||||.+.-++++++||+|+|||
T Consensus 693 -------------------------y~v--------------------qgr~vlpiRwmawEsillgkFttaSDvWafgv 727 (807)
T KOG1094|consen 693 -------------------------YRV--------------------QGRAVLPIRWMAWESILLGKFTTASDVWAFGV 727 (807)
T ss_pred -------------------------eee--------------------ecceeeeeeehhHHHHHhccccchhhhhhhHH
Confidence 000 00123367899999999899999999999999
Q ss_pred hhhhccc-----cCCCCchHHHHHHHhh----cCCC--CccccccCchHH-HHHHHcCCCCCCCCCChHHHH
Q 004989 300 LLFELFC-----PFSTGEEKTRTMSSLR----HRVL--PPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 300 ll~eLlt-----pf~~~~~~~~~~~~l~----~~~~--p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL 359 (720)
++||+++ ||...... ....+.. ++.. -+..+..+|... +++.+||..|-++||+.+++.
T Consensus 728 TlwE~~~~C~e~Py~~lt~e-~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh 798 (807)
T KOG1094|consen 728 TLWEVFMLCREQPYSQLTDE-QVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLH 798 (807)
T ss_pred HHHHHHHHHhhCchhhhhHH-HHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence 9999998 87764332 2222221 1111 111223445444 999999999999999999984
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-25 Score=215.74 Aligned_cols=159 Identities=18% Similarity=0.211 Sum_probs=122.2
Q ss_pred CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccccccc
Q 004989 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQN 184 (720)
Q Consensus 105 gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~ 184 (720)
|+|.+++...+..+++.+++.|+.||+.||.|||+++ ||+|||++.++.+++ ||.+...+..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 6899999765667999999999999999999999998 999999999999998 8876321100
Q ss_pred ccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCC
Q 004989 185 METKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPF 264 (720)
Q Consensus 185 ~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~ 264 (720)
T Consensus 63 -------------------------------------------------------------------------------- 62 (176)
T smart00750 63 -------------------------------------------------------------------------------- 62 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCc-----cccccCc-
Q 004989 265 PMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-----QLLLKFP- 335 (720)
Q Consensus 265 ~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-----~~~~~~p- 335 (720)
...||+.|+|||++.+..++.++|||||||++|||++ ||............+.....+. ......+
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSA 137 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHh
Confidence 0246899999999999999999999999999999999 6654333222333332221111 1111222
Q ss_pred --hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 336 --KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 336 --~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
...+|+.+||..+|.+||++.|+++|+|+..
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 3569999999999999999999999998753
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-24 Score=240.85 Aligned_cols=212 Identities=17% Similarity=0.173 Sum_probs=141.1
Q ss_pred hhhhhcccCCCCCc-----eecccceeecC----CCCCcEEEEEec-CCCCHHHHHhCCC--------------------
Q 004989 66 SDGVELTHGDHLRN-----QGGLSGVCENE----AAIDPFVHAIEW-GDVSLRQWLDKPK-------------------- 115 (720)
Q Consensus 66 ~e~~~L~~l~HpnI-----V~l~~~~~~~~----~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------- 115 (720)
.|..++.++.|.++ +++++.+.... ......++|||| .+++|.++|....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 45566667766655 56666222111 112347999999 9999999985321
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCC
Q 004989 116 ---RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 192 (720)
Q Consensus 116 ---~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~ 192 (720)
..+++..++.++.||+.+|.|||+++|+||||||+|||++.++.++|+|||++.......
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~----------------- 363 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI----------------- 363 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----------------
Confidence 123567788999999999999999999999999999999999999999999874321100
Q ss_pred CCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccc
Q 004989 193 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLM 272 (720)
Q Consensus 193 ~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 272 (720)
.+ ......
T Consensus 364 ----------------~~--------------------------------------------------------~~~~g~ 371 (507)
T PLN03224 364 ----------------NF--------------------------------------------------------NPLYGM 371 (507)
T ss_pred ----------------cc--------------------------------------------------------CccccC
Confidence 00 000024
Q ss_pred cCCcccCcccccCCC--------------------CC--ccccchhhhchhhhccccCC-CCch---H---H-------H
Q 004989 273 ETNWYASPEELAGAP--------------------VS--CASDIYRLGVLLFELFCPFS-TGEE---K---T-------R 316 (720)
Q Consensus 273 GT~~Y~APE~l~~~~--------------------~s--~~sDIwSLGvll~eLltpf~-~~~~---~---~-------~ 316 (720)
+|+.|+|||++.... |+ ...||||+||++|+|++|.. +... . . .
T Consensus 372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~ 451 (507)
T PLN03224 372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLN 451 (507)
T ss_pred CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHH
Confidence 588999999985432 11 24799999999999998432 1110 0 0 0
Q ss_pred HHHHhhcCCCC-ccccccCchHHHHHHHcCCCCC---CCCCChHHHHcCcccCC
Q 004989 317 TMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEP---SGRPKMGELLQSEFLNE 366 (720)
Q Consensus 317 ~~~~l~~~~~p-~~~~~~~p~~~~Li~~~L~~dP---~~Rpta~eiL~hp~~~~ 366 (720)
.+.......+. +.+....+...+|+.+||..+| .+|+|+.|+|+||||..
T Consensus 452 ~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 452 RWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred HHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 01111111111 1122233445699999999766 68999999999999975
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-25 Score=230.31 Aligned_cols=206 Identities=15% Similarity=0.190 Sum_probs=151.5
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-----
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS----- 139 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs----- 139 (720)
+|+.----|+|+||+.+++.=..+.....++|||.+| +.|||.|||... .++.....+++..++.||+|||-
T Consensus 254 tEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GT 331 (513)
T KOG2052|consen 254 TEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGT 331 (513)
T ss_pred HHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcC
Confidence 3333333488999999999655666667789999999 999999999663 39999999999999999999994
Q ss_pred ---CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 140 ---QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 ---~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
-.|+|||||..|||+..+|...|+|+|+|.....+.
T Consensus 332 qgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t----------------------------------------- 370 (513)
T KOG2052|consen 332 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDT----------------------------------------- 370 (513)
T ss_pred CCCchhhccccccccEEEccCCcEEEeeceeeEEecccC-----------------------------------------
Confidence 359999999999999999999999998884332210
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC------CCc
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSC 290 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~s~ 290 (720)
...+......+||..|||||+|...- .-.
T Consensus 371 ---------------------------------------------~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk 405 (513)
T KOG2052|consen 371 ---------------------------------------------DTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYK 405 (513)
T ss_pred ---------------------------------------------CcccCCCCCccceeeccChHHhhhhcChhhhhhhh
Confidence 00111223369999999999996543 234
Q ss_pred cccchhhhchhhhccc-------------cCCCC---chHHHHHH-HhhcCCCCccccccC---ch---HHHHHHHcCCC
Q 004989 291 ASDIYRLGVLLFELFC-------------PFSTG---EEKTRTMS-SLRHRVLPPQLLLKF---PK---EASFCLWLLHP 347 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt-------------pf~~~---~~~~~~~~-~l~~~~~p~~~~~~~---p~---~~~Li~~~L~~ 347 (720)
.+||||||.++||+.. ||... ++..+.|. .+.-+.+.|.+++.| |. ...+++.||..
T Consensus 406 ~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~ 485 (513)
T KOG2052|consen 406 RADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYA 485 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcC
Confidence 6899999999999986 66543 23333332 233334444444433 22 23899999999
Q ss_pred CCCCCCChHHHH
Q 004989 348 EPSGRPKMGELL 359 (720)
Q Consensus 348 dP~~Rpta~eiL 359 (720)
||..|.||-.|.
T Consensus 486 Np~aRltALriK 497 (513)
T KOG2052|consen 486 NPAARLTALRIK 497 (513)
T ss_pred CchhhhHHHHHH
Confidence 999999876553
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=238.33 Aligned_cols=207 Identities=16% Similarity=0.145 Sum_probs=164.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|+.+|.+|+|||+|+|||++.. . ...+|||+ ..|+|.+.|++ ....|.......|+.||+.|+.||.++++
T Consensus 159 lrEas~M~~L~H~hliRLyGvVl~-q----p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrl 233 (1039)
T KOG0199|consen 159 LREASHMLKLQHPHLIRLYGVVLD-Q----PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRL 233 (1039)
T ss_pred HHHHHHHHhccCcceeEEeeeecc-c----hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhh
Confidence 377889999999999999995554 3 36899999 99999999965 55568888999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||-..|+|+-....|||+|||+.+..|..+-... |
T Consensus 234 vHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv------------------------------m------------ 271 (1039)
T KOG0199|consen 234 VHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV------------------------------M------------ 271 (1039)
T ss_pred hhhhhhhhhheecccceeeeecccceeccCCCCcceE------------------------------e------------
Confidence 9999999999999999999999998876544311000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+ .. ..-...|+|||.|+...++.+||+|++||++|
T Consensus 272 ----------------------------~------p~-----------rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiW 306 (1039)
T KOG0199|consen 272 ----------------------------A------PQ-----------RKVPFAWCAPESLRHRKFSHASDVWMYGVTIW 306 (1039)
T ss_pred ----------------------------c------CC-----------CcCcccccCHhHhccccccccchhhhhhhhHH
Confidence 0 00 11245699999999999999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||++ ||.+.... .++..+..+..-+.......+..++++.||..+|.+|||+..|...-+.
T Consensus 307 EMFtyGEePW~G~~g~-qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 307 EMFTYGEEPWVGCRGI-QILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred hhhccCCCCCCCCCHH-HHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 9999 77776554 5666666655544444444455599999999999999999988754333
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-25 Score=235.77 Aligned_cols=147 Identities=24% Similarity=0.352 Sum_probs=128.1
Q ss_pred hhhhhcccCC---CCCceecccceeecCCCCCcEEEEEec--CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 66 SDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~L~~l~---HpnIV~l~~~~~~~~~~~~~~~lv~E~--~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.|+.||+.++ |+||+++++ +|+++. ++|++||. .|.+|.++|..+. .++|.++..||+||+.|+++||++
T Consensus 615 ~EIqIla~l~~~sH~NIlKlLd-fFEddd---~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~ 689 (772)
T KOG1152|consen 615 SEIQILATLNKHSHENILKLLD-FFEDDD---YYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQ 689 (772)
T ss_pred hhHHHHHHhhhcCccchhhhhh-eeecCC---eeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccccc
Confidence 7888999998 999999999 888775 68999998 8899999995444 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||||-+|+.++.+|-+||||||.+.-. +-+.|
T Consensus 690 ~ivhrdikdenvivd~~g~~klidfgsaa~~----------------------------------ksgpf---------- 725 (772)
T KOG1152|consen 690 GIVHRDIKDENVIVDSNGFVKLIDFGSAAYT----------------------------------KSGPF---------- 725 (772)
T ss_pred CceecccccccEEEecCCeEEEeeccchhhh----------------------------------cCCCc----------
Confidence 9999999999999999999999999987321 00122
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGv 299 (720)
...+||..|.|||++.|.+| +..-|||+||+
T Consensus 726 ------------------------------------------------d~f~gtv~~aapevl~g~~y~gk~qdiwalgi 757 (772)
T KOG1152|consen 726 ------------------------------------------------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGI 757 (772)
T ss_pred ------------------------------------------------ceeeeeccccchhhhCCCccCCCcchhhhhhh
Confidence 12589999999999999986 88899999999
Q ss_pred hhhhccc---cCC
Q 004989 300 LLFELFC---PFS 309 (720)
Q Consensus 300 ll~eLlt---pf~ 309 (720)
+||.++. ||.
T Consensus 758 llytivykenpyy 770 (772)
T KOG1152|consen 758 LLYTIVYKENPYY 770 (772)
T ss_pred eeeEEEeccCCCc
Confidence 9999887 664
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-24 Score=262.55 Aligned_cols=192 Identities=17% Similarity=0.213 Sum_probs=140.5
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCC
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---SQG 141 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH---s~g 141 (720)
.|..++.+++|||||++++ ++.+.. ..|+|||| .+++|.++++. +++..+..|+.||+.||+||| +.+
T Consensus 732 ~~~~~l~~l~HpnIv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~ 803 (968)
T PLN00113 732 SEIADMGKLQHPNIVKLIG-LCRSEK---GAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPA 803 (968)
T ss_pred HHHHHHhhCCCCCcceEEE-EEEcCC---CCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 4577899999999999999 555443 46999999 89999999942 889999999999999999999 679
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++..++. |+..... .
T Consensus 804 iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~------------------------------------------~------- 833 (968)
T PLN00113 804 VVVGNLSPEKIIIDGKDEPHLR-LSLPGLL------------------------------------------C------- 833 (968)
T ss_pred eecCCCCHHhEEECCCCceEEE-ecccccc------------------------------------------c-------
Confidence 9999999999999988777763 3221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 834 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl 868 (968)
T PLN00113 834 ---------------------------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLIL 868 (968)
T ss_pred ---------------------------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHH
Confidence 00012578999999999988899999999999999
Q ss_pred hhccc---cCCCCch----HHHHHH-Hhhc----CCCCcccc-------ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEE----KTRTMS-SLRH----RVLPPQLL-------LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~----~~~~~~-~l~~----~~~p~~~~-------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ...... .... ....+.+. .......+++.+||+.||++|||+.|+++
T Consensus 869 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 869 IELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred HHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 99999 5532211 100000 0000 01111111 11122348999999999999999999986
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-24 Score=227.51 Aligned_cols=233 Identities=13% Similarity=0.119 Sum_probs=161.7
Q ss_pred ccccccccCCCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEec-CCCCHH
Q 004989 31 ALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLR 108 (720)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~-~ggsL~ 108 (720)
+||.--...-+.+.++++.|... +...|..|+++.-+-.+.|+||+++++ .-+.. .....++||+|| ..|+|.
T Consensus 222 rfg~V~KaqL~~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~-~ekr~t~~~~eywLVt~fh~kGsL~ 296 (534)
T KOG3653|consen 222 RFGCVWKAQLDNRLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIG-AEKRGTADRMEYWLVTEFHPKGSLC 296 (534)
T ss_pred ccceeehhhccCceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhc-hhccCCccccceeEEeeeccCCcHH
Confidence 34433333345566665544332 234456667777778899999999999 22222 123468999999 999999
Q ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---------CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccc
Q 004989 109 QWLDKPKRSVDVYECLHIFRQIVEIVYAAHS---------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEG 179 (720)
Q Consensus 109 ~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs---------~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~ 179 (720)
+||..+. +++.+..+|+..+++||+|||+ ..|+|||||..|||+..+++..|+|||++..+......
T Consensus 297 dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~-- 372 (534)
T KOG3653|consen 297 DYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQ-- 372 (534)
T ss_pred HHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCC--
Confidence 9996654 8999999999999999999996 57999999999999999999999999988543211000
Q ss_pred cccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhc
Q 004989 180 LNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEE 259 (720)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~ 259 (720)
+|
T Consensus 373 ----------------------------~d-------------------------------------------------- 374 (534)
T KOG3653|consen 373 ----------------------------GD-------------------------------------------------- 374 (534)
T ss_pred ----------------------------cc--------------------------------------------------
Confidence 00
Q ss_pred ccCCCCccccccccCCcccCcccccCCC-C-----Cccccchhhhchhhhccc---------------cCCC---Cch-H
Q 004989 260 KKQPFPMKQILLMETNWYASPEELAGAP-V-----SCASDIYRLGVLLFELFC---------------PFST---GEE-K 314 (720)
Q Consensus 260 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~-----s~~sDIwSLGvll~eLlt---------------pf~~---~~~-~ 314 (720)
....+||..|||||+|.+.. + -.+.||||+|.+||||++ ||.. ..+ .
T Consensus 375 --------~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~ 446 (534)
T KOG3653|consen 375 --------THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTL 446 (534)
T ss_pred --------hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCH
Confidence 01158999999999997764 2 247999999999999998 1221 111 1
Q ss_pred HHHHHHhhcCCCCccccccCc---h---HHHHHHHcCCCCCCCCCChHHH
Q 004989 315 TRTMSSLRHRVLPPQLLLKFP---K---EASFCLWLLHPEPSGRPKMGEL 358 (720)
Q Consensus 315 ~~~~~~l~~~~~p~~~~~~~p---~---~~~Li~~~L~~dP~~Rpta~ei 358 (720)
.++.....+....|.++..|- . ..+.+..||..||+.|.|+.=+
T Consensus 447 e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 447 EEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred HHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 222222223333344443332 2 2388999999999999997544
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-23 Score=219.88 Aligned_cols=249 Identities=17% Similarity=0.217 Sum_probs=157.4
Q ss_pred hchhhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
|...|..+|.. ..+.||+++.+ ++...+ .+.+|||| +..+..+++.. ++..+++.|++.++.||.++|.+
T Consensus 80 ri~~El~~L~~~gG~~ni~~~~~-~~rnnd---~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 80 RILNELEMLYRLGGSDNIIKLNG-CFRNND---QVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred HHHHHHHHHHHhccchhhhcchh-hhccCC---eeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhcc
Confidence 55566667777 45999999999 443333 68999999 88888888743 78999999999999999999999
Q ss_pred CceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||||||+|||.+ ..+.-.|+|||+|.......-. .+ .+ +.-++
T Consensus 152 GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~----~~-----------------s~-----~~~~~------- 198 (418)
T KOG1167|consen 152 GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT----EH-----------------SR-----SYSGR------- 198 (418)
T ss_pred CccccCCCccccccccccCCceEEechhHHHHHhhhhh----hh-----------------hh-----hhhcc-------
Confidence 999999999999998 5677899999999631111000 00 00 00000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcc--cCCCCccccccccCCcccCcccccCCC-CCccccchh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYR 296 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~--~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwS 296 (720)
+...+.|.. ....+... .+......+ ....+.......||++|+|||++...+ .++++||||
T Consensus 199 -------~~~~~~g~~------~~~~~~~~--~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 199 -------HATPAMGKD------VHCQSVAT--ASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred -------cCCccccCc------cccccccc--ccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 000000000 00000000 000000000 111222334578999999999998776 799999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHh---------h-----cCC--C-------------------------C-----
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSL---------R-----HRV--L-------------------------P----- 327 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l---------~-----~~~--~-------------------------p----- 327 (720)
.|||+.-+++ ||........+...+ + .+. + +
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 9999999998 764321111000000 0 000 0 0
Q ss_pred ---ccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 328 ---PQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 328 ---~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.......| ...+|+.+||+.||.+|.||+++|.||||...
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00011122 23499999999999999999999999999954
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-23 Score=228.71 Aligned_cols=207 Identities=18% Similarity=0.233 Sum_probs=160.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.++...+|||||.||+.+...+ ..++.||| +||+|.+.- ....++++.++.++.+..+.||.|||++|=+|
T Consensus 61 qei~~~~dc~h~nivay~gsylr~d----klwicMEycgggslQdiy-~~TgplselqiayvcRetl~gl~ylhs~gk~h 135 (829)
T KOG0576|consen 61 QEIGMLRDCRHPNIVAYFGSYLRRD----KLWICMEYCGGGSLQDIY-HVTGPLSELQIAYVCRETLQGLKYLHSQGKIH 135 (829)
T ss_pred cceeeeecCCCcChHHHHhhhhhhc----CcEEEEEecCCCccccee-eecccchhHHHHHHHhhhhccchhhhcCCccc
Confidence 5667888899999999999443333 46999999 899999855 55566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||-.|||+++.|.+|+.|||.+-+++.. +
T Consensus 136 RdiKGanilltd~gDvklaDfgvsaqitat-------------------------------------i------------ 166 (829)
T KOG0576|consen 136 RDIKGANILLTDEGDVKLADFGVSAQITAT-------------------------------------I------------ 166 (829)
T ss_pred ccccccceeecccCceeecccCchhhhhhh-------------------------------------h------------
Confidence 999999999999999999999987433211 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhhchh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvll 301 (720)
.+.....|||+|||||+.. ...|...+|||++|+..
T Consensus 167 -----------------------------------------~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitA 205 (829)
T KOG0576|consen 167 -----------------------------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITA 205 (829)
T ss_pred -----------------------------------------hhhhcccCCccccchhHHHHHhcccccccccccccccch
Confidence 0112258999999999873 34499999999999998
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc--cCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.||-- |.+...+....+..-..+.-||.+.. .|.... +|++.+|..+|++||+++.+|+|||+...
T Consensus 206 iel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 206 IELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 88876 43333333222222223344554433 444444 99999999999999999999999999987
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-23 Score=198.55 Aligned_cols=167 Identities=17% Similarity=0.174 Sum_probs=130.4
Q ss_pred hchhhhhh-cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVE-LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~-L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
|.-+|..+ +.....|.+|.+||..+..+ .+++.||....+|..+.+ +.+..++|..+=+|+..|+.||.|||
T Consensus 90 r~L~dldi~~r~~~CPf~V~FyGa~~reg----dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~ 165 (282)
T KOG0984|consen 90 RLLMDLDIIMRTVDCPFTVHFYGALFREG----DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLH 165 (282)
T ss_pred HHHHhhhhhccCCCCCeEEEeehhhhccc----cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHH
Confidence 33344433 44578999999999666544 479999998889987762 35566999999999999999999999
Q ss_pred HC-CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 SQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++ .|||||+||+||||+..|+||+||||.+-.. .|- .|
T Consensus 166 ~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L------------------------------------~dS-iA---- 204 (282)
T KOG0984|consen 166 SKLSVIHRDVKPSNILINYDGQVKICDFGISGYL------------------------------------VDS-IA---- 204 (282)
T ss_pred HHhhhhhccCCcceEEEccCCcEEEcccccceee------------------------------------hhh-hH----
Confidence 85 8999999999999999999999999987211 010 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC----CCCcccc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASD 293 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sD 293 (720)
+. ...|...|||||.+... .|+-+||
T Consensus 205 ----------------------------kt----------------------~daGCkpYmaPEri~~e~n~~gY~vksD 234 (282)
T KOG0984|consen 205 ----------------------------KT----------------------MDAGCKPYMAPERINPELNQKGYSVKSD 234 (282)
T ss_pred ----------------------------HH----------------------HhcCCCccCChhhcCcccCcccceeehh
Confidence 01 12467889999998543 4999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcC
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR 324 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~ 324 (720)
|||||++++||.+ ||+.+.......+.+...
T Consensus 235 vWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 235 VWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred hhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 9999999999998 888887777777666544
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=235.01 Aligned_cols=202 Identities=17% Similarity=0.207 Sum_probs=160.0
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHH
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 128 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~ 128 (720)
.|..+|.. ..|||||.+++ ++.. ...+++++|| ..|+|.++|++.. ..++..+...+..
T Consensus 350 ~El~~m~~~g~H~niv~llG-~~t~---~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~ 425 (609)
T KOG0200|consen 350 SELNVLKELGKHPNIVNLLG-ACTQ---DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAY 425 (609)
T ss_pred HHHHHHHHhcCCcchhhhee-eecc---CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHH
Confidence 66667777 55999999999 4433 2368999999 9999999996554 2488999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.|++||++..+|||||-..|||+..+..+|++|||++++......
T Consensus 426 QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~-------------------------------- 473 (609)
T KOG0200|consen 426 QIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDY-------------------------------- 473 (609)
T ss_pred HHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCc--------------------------------
Confidence 999999999999999999999999999999999999998865322100
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc--CCcccCcccccCC
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME--TNWYASPEELAGA 286 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G--T~~Y~APE~l~~~ 286 (720)
+ -+ .+ -.| ...|||||.+...
T Consensus 474 -y-~~------------------------------------~~-------------------~~~~LP~kWmApEsl~~~ 496 (609)
T KOG0200|consen 474 -Y-RT------------------------------------KS-------------------SAGTLPVKWMAPESLFDR 496 (609)
T ss_pred -e-Ee------------------------------------cC-------------------CCCccceeecCHHHhccC
Confidence 0 00 00 011 2349999999998
Q ss_pred CCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.|+.++||||+||+|||+++ ||++.......+..++.+...+......++..++++.||+.+|++||+..++.+
T Consensus 497 ~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 497 VFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred cccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 89999999999999999999 888755344556677777666555555555569999999999999999999874
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-23 Score=225.51 Aligned_cols=183 Identities=28% Similarity=0.459 Sum_probs=154.3
Q ss_pred cEEEEEec-CCCCHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCC
Q 004989 95 PFVHAIEW-GDVSLRQWLD--KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 95 ~~~lv~E~-~ggsL~~~L~--~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
++|+.|++ .-.+|.+||+ ......+...++.++.|++.|++| +|.+|||+||.||++..+.++||.|||+....
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 58999999 8889999994 344457888999999999999999 99999999999999998888988777665321
Q ss_pred CCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 004989 172 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 251 (720)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g 251 (720)
... . +...++
T Consensus 407 ~~~---------------------------------------------~------~~~~~~------------------- 416 (516)
T KOG1033|consen 407 DKD---------------------------------------------E------TVAPAA------------------- 416 (516)
T ss_pred ccC---------------------------------------------C------cccchh-------------------
Confidence 111 0 000000
Q ss_pred cchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccccCCCCchHHHHHHHhhcCCCCcccc
Q 004989 252 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLL 331 (720)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~ 331 (720)
...+..+||.|||+||++.+..|+.++||||||+|||||+.+|....+...++.+++++++||.+.
T Consensus 417 --------------a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~ 482 (516)
T KOG1033|consen 417 --------------ASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFL 482 (516)
T ss_pred --------------hhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHh
Confidence 012336899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 332 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 332 ~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
..+|.+.+|+.+||++.|.+||++.+.--|+|.
T Consensus 483 ~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 483 QDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 999999999999999999999988777767664
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-22 Score=224.97 Aligned_cols=239 Identities=15% Similarity=0.077 Sum_probs=173.8
Q ss_pred CCcccccccccCCCCCCcccccc----cccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-
Q 004989 28 SSRALNISGVSDRNPRLLRGERF----GVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW- 102 (720)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~r~----~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~- 102 (720)
++++||+-..+.+-|+...++-- ++....+..+....-.|+.+|++++|||+++|++ ++.... +.||++|
T Consensus 705 GsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLg-vc~~s~----~qlvtq~m 779 (1177)
T KOG1025|consen 705 GSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLG-VCMLST----LQLVTQLM 779 (1177)
T ss_pred ccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhh-hcccch----HHHHHHhc
Confidence 34555554444455553221111 1223333333333448899999999999999999 554442 5789999
Q ss_pred CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccccc
Q 004989 103 GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNT 182 (720)
Q Consensus 103 ~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~ 182 (720)
++|+|.++++.+...+.....+.|..||+.|+.|||.+++|||||-..|||+...+++|+.|||+++....+..+..
T Consensus 780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~--- 856 (1177)
T KOG1025|consen 780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS--- 856 (1177)
T ss_pred ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccc---
Confidence 99999999987777799999999999999999999999999999999999999999999999998865444322100
Q ss_pred ccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccC
Q 004989 183 QNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQ 262 (720)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~ 262 (720)
++.
T Consensus 857 -----------------------------------------------------------------~~~------------ 859 (1177)
T KOG1025|consen 857 -----------------------------------------------------------------APG------------ 859 (1177)
T ss_pred -----------------------------------------------------------------ccc------------
Confidence 000
Q ss_pred CCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH
Q 004989 263 PFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA 338 (720)
Q Consensus 263 ~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~ 338 (720)
..-.+.|||-|.+....|+.++||||+||++|||+| |+.+.... ++-..+..+..-+..+...-+..
T Consensus 860 --------gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~-eI~dlle~geRLsqPpiCtiDVy 930 (1177)
T KOG1025|consen 860 --------GKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE-EIPDLLEKGERLSQPPICTIDVY 930 (1177)
T ss_pred --------cccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH-HhhHHHhccccCCCCCCccHHHH
Confidence 011456899999999999999999999999999999 77765443 33344444433333323333455
Q ss_pred HHHHHcCCCCCCCCCChHHHHc
Q 004989 339 SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 339 ~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
-++.+||..|+..||+++++..
T Consensus 931 ~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 931 MVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHHHHhccCcccCccHHHHHH
Confidence 8999999999999999988864
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=193.66 Aligned_cols=176 Identities=27% Similarity=0.335 Sum_probs=145.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|...+..+.|++|+++++ .+... ...+++||+ .|++|.+++......++...++.++.+++.+|.+||+.|
T Consensus 37 ~~~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 112 (215)
T cd00180 37 ELLREIEILKKLNHPNIVKLYG-VFEDE---NHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG 112 (215)
T ss_pred HHHHHHHHHHhcCCCCeeeEee-eeecC---CeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446677899999999999999 44333 367999999 779999999654345899999999999999999999999
Q ss_pred ceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 142 IVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
++|+||+|.||+++. .+.++|+|||.+........
T Consensus 113 ~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------- 148 (215)
T cd00180 113 IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------------------------------------------- 148 (215)
T ss_pred eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--------------------------------------------
Confidence 999999999999998 89999999988743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
......+...|++||.+... .++.++|+|+||+
T Consensus 149 ----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~ 182 (215)
T cd00180 149 ----------------------------------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGV 182 (215)
T ss_pred ----------------------------------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHH
Confidence 00012457789999999887 6899999999999
Q ss_pred hhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCc
Q 004989 300 LLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSE 362 (720)
Q Consensus 300 ll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp 362 (720)
++++| +...+++.+||..+|++||++.+++.++
T Consensus 183 ~~~~l------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 183 ILYEL------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHH------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 99998 4456999999999999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-21 Score=198.19 Aligned_cols=205 Identities=20% Similarity=0.234 Sum_probs=157.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-----C--CCCCCCHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-----K--PKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-----~--~~~~l~~~~~~~i~~QIl~aL 134 (720)
+.-.|...|-.+.|||++.+.++..++... -++.+.+ +-++|..||. . ..+.++..+...++.||+.|+
T Consensus 333 ~~L~es~lly~~sH~nll~V~~V~ie~~~~---P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am 409 (563)
T KOG1024|consen 333 LLLQESMLLYGASHPNLLSVLGVSIEDYAT---PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAM 409 (563)
T ss_pred HHHHHHHHHhcCcCCCccceeEEEeeccCc---ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHH
Confidence 444677778889999999999966665543 3677777 7789999995 2 233478888999999999999
Q ss_pred HHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
+|||++||||.||-..|.+|++.-+|||+|..++++.=. +|+-
T Consensus 410 ~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP----------------------------------~DYh--- 452 (563)
T KOG1024|consen 410 EHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFP----------------------------------GDYH--- 452 (563)
T ss_pred HHHHhcCcccchhhhhcceehhheeEEeccchhccccCc----------------------------------cccc---
Confidence 999999999999999999999999999999998876311 1220
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
| +.|. .--...||+||.+....|+.++|+
T Consensus 453 ----------c---------------------LGDn--------------------EnRPvkWMslEal~n~~yssasDv 481 (563)
T KOG1024|consen 453 ----------C---------------------LGDN--------------------ENRPVKWMSLEALQNSHYSSASDV 481 (563)
T ss_pred ----------c---------------------cCCC--------------------CCCcccccCHHHHhhhhhcchhhh
Confidence 0 0000 011446999999999999999999
Q ss_pred hhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004989 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||+||||+| |+...++. ++...+..+.. -..+..+|++. .++..||...|++||+.+++.+
T Consensus 482 WsfGVllWELmtlg~~PyaeIDPf-Em~~ylkdGyR-laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 482 WSFGVLLWELMTLGKLPYAEIDPF-EMEHYLKDGYR-LAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHHHHHHHHHhcCCCCccccCHH-HHHHHHhccce-ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 999999999999 66655443 34444444432 22334677776 9999999999999999999875
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.8e-21 Score=220.84 Aligned_cols=213 Identities=17% Similarity=0.239 Sum_probs=156.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+-+.+.||||+..+..+++... .+..||| .+ +|..++... ..++..++..++.||+.||+|+|+.||
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~----~~~~mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~Gi 441 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDG----ILQSMEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMGL 441 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhccc----chhhhhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcCc
Confidence 3467777788999999988884443332 2334999 55 999998554 348999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
.||||||+|+++...|.+|++|||.+..+-.+.-.
T Consensus 442 ahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~--------------------------------------------- 476 (601)
T KOG0590|consen 442 AHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK--------------------------------------------- 476 (601)
T ss_pred eeccCccccEEEecCCceEEeecCcceeeccCcch---------------------------------------------
Confidence 99999999999999999999999998443221000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc-cccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC-ASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~-~sDIwSLGvll 301 (720)
... .....+|+..|+|||++.+..|.+ ..||||.|+++
T Consensus 477 ----------------------~~~-------------------~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~ 515 (601)
T KOG0590|consen 477 ----------------------NIH-------------------ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIY 515 (601)
T ss_pred ----------------------hhh-------------------hhcCcccCCcCcCcccccccccCcchhhhhhccceE
Confidence 000 011258899999999999999865 78999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh---cC---CCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLR---HR---VLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~---~~---~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+.|.+ ||.........+.... +. .-+..++...|... .+|-+||++||.+|.|+++|++.+||+...
T Consensus 516 ~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 516 ICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred EEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 99999 3332211111101111 11 11233444555554 899999999999999999999999999863
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-20 Score=184.61 Aligned_cols=180 Identities=16% Similarity=0.206 Sum_probs=136.3
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 004989 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
.|.|||.-|++.|+..+ .++++||| +-|+|..-+...+ +.|...+.++.|++.|++|+|+.++||||||.+|||
T Consensus 79 ~H~hIi~tY~vaFqt~d---~YvF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiL 153 (378)
T KOG1345|consen 79 PHQHIIDTYEVAFQTSD---AYVFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENIL 153 (378)
T ss_pred cchhhhHHHHHHhhcCc---eEEEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEE
Confidence 49999999998887765 67899999 9999999774433 899999999999999999999999999999999999
Q ss_pred Ec--cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCc
Q 004989 154 MS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 154 l~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
|- +...|||||||.....|...-
T Consensus 154 if~~df~rvKlcDFG~t~k~g~tV~------------------------------------------------------- 178 (378)
T KOG1345|consen 154 IFDADFYRVKLCDFGLTRKVGTTVK------------------------------------------------------- 178 (378)
T ss_pred EecCCccEEEeeecccccccCceeh-------------------------------------------------------
Confidence 96 445789988887744322200
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-----CCccccchhhhchhhhccc
Q 004989 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sDIwSLGvll~eLlt 306 (720)
..-.+..|.+||++.... ..+.+|||.||+++|.+|+
T Consensus 179 --------------------------------------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~clt 220 (378)
T KOG1345|consen 179 --------------------------------------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLT 220 (378)
T ss_pred --------------------------------------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeec
Confidence 011255689999874332 5889999999999999999
Q ss_pred cCCCCc------hHHHHHHHhh---cCCCCccccccCchHHHHHHHcCCCCCCCC
Q 004989 307 PFSTGE------EKTRTMSSLR---HRVLPPQLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 307 pf~~~~------~~~~~~~~l~---~~~~p~~~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
+-.++. .....+.... ...+|..+....+....+.++-|.++|++|
T Consensus 221 G~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 221 GKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred CCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 443331 1112222222 234566666677778899999999999999
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-19 Score=186.14 Aligned_cols=229 Identities=17% Similarity=0.210 Sum_probs=151.3
Q ss_pred CCCcccccccccCCCCccchhhch-hhhhhcccCCCCCceecccceeecCC------------------------CCCcE
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKH-SDGVELTHGDHLRNQGGLSGVCENEA------------------------AIDPF 96 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~-~e~~~L~~l~HpnIV~l~~~~~~~~~------------------------~~~~~ 96 (720)
.+.+|+.+....+++ +...||.- +..+.|. .|||||+++..|+. .. +...+
T Consensus 243 ~ElvPa~~~a~~~e~-~~~t~R~l~nqtvhLa--~HPNIvri~~aF~d-sv~~lPda~~~YPdalp~R~~p~g~g~~~tl 318 (598)
T KOG4158|consen 243 NELVPAPNAAKLLEG-QMGTFRPLPNQTVHLA--KHPNIVRIQTAFID-SVKVLPDAIERYPDALPARWYPSGAGEPKTL 318 (598)
T ss_pred hhccCcchhhhhccc-ccceeeeCCCCCcccC--CCCCEEeehhhhhh-hhccCCchhhhCcccccceecccccCCCceE
Confidence 334444444444333 23334443 4444444 59999999995542 21 12237
Q ss_pred EEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc--cCC--ceEEeecCcccCCC
Q 004989 97 VHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS--SFN--HVSFIESASCSDSG 172 (720)
Q Consensus 97 ~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~--~~~--~vkliDfg~a~~~g 172 (720)
|+||.-...+|+++|.... .+......|+.|+++|+.|||.+||.|||||.+|||+. +++ .+.+.|||+|-...
T Consensus 319 ylvMkrY~~tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~ 396 (598)
T KOG4158|consen 319 YLVMKRYRQTLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADD 396 (598)
T ss_pred EEehhcchhhHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecc
Confidence 9999987789999995544 67888899999999999999999999999999999995 333 47888888882211
Q ss_pred CCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 004989 173 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252 (720)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~ 252 (720)
.- |...+. .....|
T Consensus 397 ~h----------------------------------------------------------Glqlpy-----~S~~Vd--- 410 (598)
T KOG4158|consen 397 NH----------------------------------------------------------GLQLPY-----ESDEVD--- 410 (598)
T ss_pred cc----------------------------------------------------------cccccc-----cccccc---
Confidence 10 000000 011122
Q ss_pred chhhhhcccCCCCccccccccCCcccCcccccCCC------CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhc
Q 004989 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH 323 (720)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~ 323 (720)
.-|...-||||+....+ --.++|.|+.|.+.||+++ ||....+..-.....++
T Consensus 411 ------------------~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe 472 (598)
T KOG4158|consen 411 ------------------LGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE 472 (598)
T ss_pred ------------------CCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh
Confidence 23677889999986544 1347899999999999998 98874332222222444
Q ss_pred CCCCccccccCchHHHHHHHcCCCCCCCCCCh---HHHHc
Q 004989 324 RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQ 360 (720)
Q Consensus 324 ~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta---~eiL~ 360 (720)
..+|+-.....|...+++..+|++||++|++. +.+|+
T Consensus 473 ~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 473 SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred hhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 45555444444555699999999999999874 44554
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.5e-19 Score=177.63 Aligned_cols=170 Identities=25% Similarity=0.290 Sum_probs=131.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|...+.+++|+||+++++ .+... ...++++|+ .+++|.+++......+++..+..++.|++.+|.+||+.|
T Consensus 43 ~~~~e~~~~~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 118 (225)
T smart00221 43 EFLREIRILKKLKHPNIVKLYG-VFEDP---EPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG 118 (225)
T ss_pred HHHHHHHHHHhCCCCChhhhee-eeecC---CceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3346667888899999999999 44433 257999999 777999999544333899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+....... .+
T Consensus 119 i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~--------------------------------~~------------ 154 (225)
T smart00221 119 IVHRDLKPENILLGMDGLVKLADFGLARFIHRDL--------------------------------AA------------ 154 (225)
T ss_pred eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc--------------------------------cc------------
Confidence 9999999999999999999999998874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc-cCCCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l-~~~~~s~~sDIwSLGvl 300 (720)
......++..|++||.+ ....++.++|||+||++
T Consensus 155 ---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~ 189 (225)
T smart00221 155 ---------------------------------------------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVI 189 (225)
T ss_pred ---------------------------------------------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHH
Confidence 00013567889999998 55568889999999999
Q ss_pred hhhccc---cCCC-CchHHHHHHHhhcCC
Q 004989 301 LFELFC---PFST-GEEKTRTMSSLRHRV 325 (720)
Q Consensus 301 l~eLlt---pf~~-~~~~~~~~~~l~~~~ 325 (720)
+|+|++ ||.. .+....++..+..+.
T Consensus 190 ~~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 190 LYELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred HHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 999999 6755 344445666666554
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.3e-17 Score=169.94 Aligned_cols=219 Identities=22% Similarity=0.270 Sum_probs=160.3
Q ss_pred hhhchhhhhhcccCCCC-CceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHL-RNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~Hp-nIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~y 136 (720)
.....+|..+++.+.|+ +|+++++ .+.... ..++++++ .+++|.+++.... ..++...+..++.|++.++.|
T Consensus 41 ~~~~~~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (384)
T COG0515 41 VERFLREIQILASLNHPPNIVKLYD-FFQDEG---SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116 (384)
T ss_pred HHHHHHHHHHHHHccCCcceeeEEE-EEecCC---EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHH
Confidence 33445777789999999 7999999 443332 37999999 9999998775543 259999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
+|+.|++||||||+||+++..+ .++++|||.+......... .
T Consensus 117 ~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~--------------------------------~----- 159 (384)
T COG0515 117 LHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST--------------------------------S----- 159 (384)
T ss_pred HHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc--------------------------------c-----
Confidence 9999999999999999999888 7999999987432111000 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCAS 292 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~s 292 (720)
..........||.+|+|||.+.+ ..+....
T Consensus 160 -----------------------------------------------~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~ 192 (384)
T COG0515 160 -----------------------------------------------SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSS 192 (384)
T ss_pred -----------------------------------------------cccccccccccccccCCHHHhcCCCCCCCCchH
Confidence 00000112578999999999988 4689999
Q ss_pred cchhhhchhhhccc---cCCCCch---HHHHHHHhhcCCCC---ccccccC-----chHHHHHHHcCCCCCCCCCChHHH
Q 004989 293 DIYRLGVLLFELFC---PFSTGEE---KTRTMSSLRHRVLP---PQLLLKF-----PKEASFCLWLLHPEPSGRPKMGEL 358 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~---~~~~~~~l~~~~~p---~~~~~~~-----p~~~~Li~~~L~~dP~~Rpta~ei 358 (720)
|+|++|++++++++ ||..... .......+.....+ ....... ....+++..++..+|..|.+..+.
T Consensus 193 D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 272 (384)
T COG0515 193 DIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSD 272 (384)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHH
Confidence 99999999999888 5554442 33444444443322 1222221 244599999999999999999998
Q ss_pred HcCcccCCC
Q 004989 359 LQSEFLNEP 367 (720)
Q Consensus 359 L~hp~~~~~ 367 (720)
..+++....
T Consensus 273 ~~~~~~~~~ 281 (384)
T COG0515 273 LSHDLLAHL 281 (384)
T ss_pred hhchHhhCc
Confidence 887655544
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.6e-18 Score=189.17 Aligned_cols=215 Identities=17% Similarity=0.202 Sum_probs=162.7
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++...+ ||.+|++.. .++.+. ..++++++ .|+.|...+.+. ..+.+.....+...++-+++++|+.
T Consensus 42 ~t~~er~il~~~~~~~f~v~lhy-afqt~~---kl~l~ld~~rgg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l 116 (612)
T KOG0603|consen 42 HTKQERIILAFVHNTPFLVKLHY-AFQTDG---KLYLILDFLRGGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKL 116 (612)
T ss_pred ccccHHHHHhhccCCCceeeeee-eecccc---chhHhhhhcccchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchh
Confidence 4456667888877 999999998 454544 46899999 888999888444 3488999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|||+|++||+++.+|++++.|||..+..-
T Consensus 117 ~iiyrd~k~enilld~~Ghi~~tdfglske~v------------------------------------------------ 148 (612)
T KOG0603|consen 117 GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAV------------------------------------------------ 148 (612)
T ss_pred HHHHhcccccceeecccCccccCCchhhhHhH------------------------------------------------
Confidence 99999999999999999999998777663210
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
+. ...+||.-|||||+++ ....++|.||+|++
T Consensus 149 -------------------------------------~~---------~~~cgt~eymApEI~~--gh~~a~D~ws~gvl 180 (612)
T KOG0603|consen 149 -------------------------------------KE---------KIACGTYEYRAPEIIN--GHLSAADWWSFGVL 180 (612)
T ss_pred -------------------------------------hh---------hhcccchhhhhhHhhh--ccCCcccchhhhhh
Confidence 00 0127899999999998 56899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccch
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSM 371 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l 371 (720)
+|||++ ||.+ ..+..|....++ .....++...+++..++..+|.+|. -+.|+++|+||... +..+
T Consensus 181 ~felltg~~pf~~-----~~~~~Il~~~~~-~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l 254 (612)
T KOG0603|consen 181 AFELLTGTLPFGG-----DTMKRILKAELE-MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNEL 254 (612)
T ss_pred HHHHhhCCCCCch-----HHHHHHhhhccC-CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhH
Confidence 999999 6665 344444332111 1112234445899999999999995 46899999999987 4445
Q ss_pred HHHHHHHHHhhhh
Q 004989 372 EEREAAIELREQI 384 (720)
Q Consensus 372 ~e~~~~~~~~e~~ 384 (720)
..+....++....
T Consensus 255 ~~r~~~~~fkp~~ 267 (612)
T KOG0603|consen 255 EARSRPPPFKPGS 267 (612)
T ss_pred hhcCCCCCCCCcc
Confidence 5555555554433
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.1e-18 Score=192.84 Aligned_cols=202 Identities=19% Similarity=0.213 Sum_probs=141.2
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 004989 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 71 L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~ 150 (720)
...++|||.+.+-- +..... ..|+|-+|--.+|.|.|.. .+-+...+.+-|+.||+.||.-+|..||+|||||.+
T Consensus 75 ~~l~~~pn~lPfqk-~~~t~k---AAylvRqyvkhnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsE 149 (1431)
T KOG1240|consen 75 FALMKAPNCLPFQK-VLVTDK---AAYLVRQYVKHNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSE 149 (1431)
T ss_pred HHhhcCCcccchHH-HHHhhH---HHHHHHHHHhhhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccc
Confidence 56678999999877 444443 3488889977799999933 334788999999999999999999999999999999
Q ss_pred cEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCC
Q 004989 151 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 230 (720)
Q Consensus 151 NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~ 230 (720)
||||++-+.+.|.||..-+..=.+ +|- -+||+.-
T Consensus 150 NILiTSWNW~~LtDFAsFKPtYLP---------------------eDN--------Padf~fF----------------- 183 (1431)
T KOG1240|consen 150 NILITSWNWLYLTDFASFKPTYLP---------------------EDN--------PADFTFF----------------- 183 (1431)
T ss_pred eEEEeeechhhhhcccccCCccCC---------------------CCC--------cccceEE-----------------
Confidence 999999999999999754221000 000 0455321
Q ss_pred ccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC----------C-CCccccchhhhc
Q 004989 231 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----------P-VSCASDIYRLGV 299 (720)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----------~-~s~~sDIwSLGv 299 (720)
.|.. ---..|+|||-+... + .+++.||||+||
T Consensus 184 -----------------FDTS--------------------rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GC 226 (1431)
T KOG1240|consen 184 -----------------FDTS--------------------RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGC 226 (1431)
T ss_pred -----------------EecC--------------------CceeeecChHhhhccccccccCCcccccChhhhhhhhhH
Confidence 1111 012369999988541 1 578999999999
Q ss_pred hhhhccc-cCCCCchHHHHHHHhhc-CCCCccccccCc--hHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 300 LLFELFC-PFSTGEEKTRTMSSLRH-RVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 300 ll~eLlt-pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p--~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+++||++ +-+.++ ..+....-++ ...+...+...+ ....|+..|++.||++|.+|++.|+.
T Consensus 227 ViaELf~Eg~PlF~-LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 227 VIAELFLEGRPLFT-LSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhcCCCccc-HHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 9999999 222221 1222222222 223333333333 34599999999999999999999984
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-16 Score=183.47 Aligned_cols=164 Identities=18% Similarity=0.241 Sum_probs=118.5
Q ss_pred HHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 131 l~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+.+++|||+-||+|||+||+|.+|+.-|++|+.|||+.+........
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at--------------------------------- 199 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT--------------------------------- 199 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc---------------------------------
Confidence 78999999999999999999999999999999999887442211000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
++..-.+.+...+- .....+|||.|+|||++....|+.
T Consensus 200 -----------------------------------nl~eg~I~k~t~Ef-------~dKqvcgTPeyiaPeVilrqgygk 237 (1205)
T KOG0606|consen 200 -----------------------------------NLKEGHIEKDTHEF-------QDKQVCGTPEYIAPEVILRQGYGK 237 (1205)
T ss_pred -----------------------------------hhhhcchHHHHHHh-------hhccccCCccccChhhhhhhccCC
Confidence 00000000000000 011158999999999999999999
Q ss_pred cccchhhhchhhhccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcc
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEF 363 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~Li~~~L~~dP~~Rp---ta~eiL~hp~ 363 (720)
.+|+|++|+|+||.+. ||++..+..-.-..+...+ .|..-....++.+++|..+|+.+|..|. .+-++.+|+|
T Consensus 238 pvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~f 317 (1205)
T KOG0606|consen 238 PVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGF 317 (1205)
T ss_pred CccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccc
Confidence 9999999999999987 8888765543334444433 3444333445556999999999999994 6778899999
Q ss_pred cCCCcc
Q 004989 364 LNEPRD 369 (720)
Q Consensus 364 ~~~~~~ 369 (720)
|.....
T Consensus 318 f~~LDw 323 (1205)
T KOG0606|consen 318 FQLLDW 323 (1205)
T ss_pred eeeccc
Confidence 998844
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.63 E-value=9e-16 Score=157.88 Aligned_cols=122 Identities=11% Similarity=0.188 Sum_probs=99.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
+...+||...+-.++.+.+ +|.+||.||+|+|||+.||||+.|++|++||..++.... ..+ .|+..|
T Consensus 136 D~TvR~WD~~TeTp~~t~K-----gH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g-------~~l~gH~K~I 203 (480)
T KOG0271|consen 136 DTTVRLWDLDTETPLFTCK-----GHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG-------RALRGHKKWI 203 (480)
T ss_pred CceEEeeccCCCCcceeec-----CCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc-------ccccCcccce
Confidence 4456788888777777776 359999999999999999999999999999988762111 122 235669
Q ss_pred EEEEEecCCC----CEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 660 SSICWNSYIK----SQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~w~~~~~----~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
++|+|.|.+. .+|||+|.||+|+|||+..|+++.. |+||.|...+. +-+||.|.-
T Consensus 204 t~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gl-iySgS~Drt 269 (480)
T KOG0271|consen 204 TALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGL-IYSGSQDRT 269 (480)
T ss_pred eEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCce-EEecCCCce
Confidence 9999998654 4899999999999999999999987 99999997765 457888753
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-15 Score=156.20 Aligned_cols=125 Identities=10% Similarity=0.131 Sum_probs=107.6
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~ 658 (720)
.+.+.+.|...+.+-+..| .||...|.+|+|+|+|..+||||.|+++||||++.. .++..|.. .+-
T Consensus 323 lD~~~RvWDlRtgr~im~L-----~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r--------~~ly~ipAH~nl 389 (459)
T KOG0272|consen 323 LDSLGRVWDLRTGRCIMFL-----AGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR--------SELYTIPAHSNL 389 (459)
T ss_pred ccchhheeecccCcEEEEe-----cccccceeeEeECCCceEEeecCCCCcEEEeeeccc--------ccceecccccch
Confidence 3445677777777777666 456999999999999999999999999999999876 24555544 667
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+.|+|+|..+.+|+|||||++|+||.-.+.+++++ |.|++.++.+..+.+++||--..
T Consensus 390 VS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~K 455 (459)
T KOG0272|consen 390 VSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIK 455 (459)
T ss_pred hhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceee
Confidence 999999998899999999999999999999999987 99999999999999999996543
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.8e-16 Score=155.86 Aligned_cols=112 Identities=15% Similarity=0.223 Sum_probs=97.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE--EecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV--EMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
|..+.|.|..|+|||+||+|||+||-|.|||+.++. -..|..|... .|.+...|.|++||.+ ..+||||+.||.||
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GK-lrKDLkYQAqd~fMMmd~aVlci~FSRD-sEMlAsGsqDGkIK 288 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGK-LRKDLKYQAQDNFMMMDDAVLCISFSRD-SEMLASGSQDGKIK 288 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccch-hhhhhhhhhhcceeecccceEEEeeccc-HHHhhccCcCCcEE
Confidence 346779999999999999999999999999998872 2335555553 4667889999999985 56999999999999
Q ss_pred EEECCCCcEEEE--------EEEEeecCCceEEEecCccceEEc
Q 004989 683 VGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 683 lWD~~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
||-+.||+|++. |+|+.|+++++.+.++|||.+..+
T Consensus 289 vWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRi 332 (508)
T KOG0275|consen 289 VWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRI 332 (508)
T ss_pred EEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEE
Confidence 999999999985 899999999999999999997654
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.6e-15 Score=154.49 Aligned_cols=119 Identities=12% Similarity=0.195 Sum_probs=97.7
Q ss_pred hccccceEEeeeec-cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEE
Q 004989 586 YLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSIC 663 (720)
Q Consensus 586 ~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~ 663 (720)
|..-.-|||.+..+ ...+.||+..|.|++|+|+|..|||||-|-|+|+||+.+. .|...+ .|.++|.||+
T Consensus 93 yqpqavfrvrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te--------Tp~~t~KgH~~WVlcva 164 (480)
T KOG0271|consen 93 YQPQAVFRVRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE--------TPLFTCKGHKNWVLCVA 164 (480)
T ss_pred eccchhhcccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC--------CcceeecCCccEEEEEE
Confidence 34445577888888 7789999999999999999999999999999999999876 355554 4588999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EEEEeecC-----CceEEEecCcc
Q 004989 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LYCIVLNK-----LLIIFRYGMFQ 713 (720)
Q Consensus 664 w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------v~~v~~~~-----~~~~~~~~~~~ 713 (720)
|+|++ ..||||+.||+|++||..+|+++.. |++++|.| .+-.++++|=|
T Consensus 165 wsPDg-k~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skD 226 (480)
T KOG0271|consen 165 WSPDG-KKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKD 226 (480)
T ss_pred ECCCc-chhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCC
Confidence 99965 5999999999999999999998875 88888854 34445554433
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.5e-15 Score=161.62 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=75.8
Q ss_pred hchhhhhhcccCCCCCcee-cccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQG-GLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~-l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|+||+. +++ .+ ..|+|||| .|++|.. + .. .. ...++.|++.+|.|||++
T Consensus 67 ~~~~E~~iL~~L~h~~iv~~l~~----~~----~~~LVmE~~~G~~L~~-~-~~---~~---~~~~~~~i~~aL~~lH~~ 130 (365)
T PRK09188 67 LAAREIRALKTVRGIGVVPQLLA----TG----KDGLVRGWTEGVPLHL-A-RP---HG---DPAWFRSAHRALRDLHRA 130 (365)
T ss_pred HHHHHHHHHHhccCCCCCcEEEE----cC----CcEEEEEccCCCCHHH-h-Cc---cc---hHHHHHHHHHHHHHHHHC
Confidence 3458889999999999985 443 11 36999999 8899973 2 11 11 146889999999999999
Q ss_pred CceeccC-CCCcEEEccCCceEEeecCcccCC
Q 004989 141 GIVVHNV-RPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 141 gIvHrDL-KP~NILl~~~~~vkliDfg~a~~~ 171 (720)
||+|||| ||+|||++.++.++|+|||+++.+
T Consensus 131 gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 131 GITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred CCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 9999999 999999998999999999998654
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.1e-15 Score=155.90 Aligned_cols=124 Identities=12% Similarity=0.145 Sum_probs=102.9
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004989 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+-.++..+.|.++.=.+++ +|.||..-|..|+|+|+|+||+||+.|.+-|+||+.+.... +..-+|..
T Consensus 237 ~s~Dgtvklw~~~~e~~l~-----~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~El-------L~QEGHs~ 304 (459)
T KOG0272|consen 237 ASADGTVKLWKLSQETPLQ-----DLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSEL-------LLQEGHSK 304 (459)
T ss_pred eccCCceeeeccCCCcchh-----hhhcchhhheeeeecCCCceeeecccccchhhcccccchhh-------Hhhccccc
Confidence 3445577788877655544 55677999999999999999999999999999999886321 11223455
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.|.+|+|+|+ +++++||+.|..-||||++||.||+. |++|+|+|.+-.+++||-|-
T Consensus 305 ~v~~iaf~~D-GSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dn 367 (459)
T KOG0272|consen 305 GVFSIAFQPD-GSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDN 367 (459)
T ss_pred ccceeEecCC-CceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCC
Confidence 6999999995 57999999999999999999999986 99999999999999999874
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.4e-14 Score=151.58 Aligned_cols=212 Identities=16% Similarity=0.101 Sum_probs=139.4
Q ss_pred chhhhhhcccCCC----CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDH----LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~L~~l~H----pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
...|..+|..+.. +++..+++... .....-|+||+..|.+|.++.+.. .+.++...+..|+.|++.+|.+||
T Consensus 63 l~~E~~vl~~l~~~~~~~~~~~~~~~G~---~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH 139 (322)
T KOG1164|consen 63 LKIEIQVLKKLEKKNGPSHFPKLLDHGR---STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH 139 (322)
T ss_pred chhHHHHHHHHhhhcCCCCCCEEEEecc---CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH
Confidence 3355556666653 57777777221 233357999999999999977433 367999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccC-----CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 139 SQGIVVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
+.|++||||||+|+++... ..+.++|||+++.+... .+.|-.
T Consensus 140 ~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~---------------------------------~~~~~~ 186 (322)
T KOG1164|consen 140 SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYV---------------------------------GDSGGN 186 (322)
T ss_pred hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcccccc---------------------------------CCCCcc
Confidence 9999999999999999854 46899999998632110 000000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcc--ccccccCCcccCcccccCCCCCcc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK--QILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
..+.+ .....||..|+++....+...+.+
T Consensus 187 -------------------------------------------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~ 217 (322)
T KOG1164|consen 187 -------------------------------------------------LRPPRPQKGLFRGTLRYASINVHLGIEQGRR 217 (322)
T ss_pred -------------------------------------------------cccCCCCccCCCCccccccHHHhCCCccCCc
Confidence 00000 011469999999999999999999
Q ss_pred ccchhhhchhhhccc---cCCCCchH--HHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.|+||++-++.||+. ||...... ...+...........+....|.+. .+...+-..+...+|....+..
T Consensus 218 DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 218 DDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred hhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 999999999999997 55443321 111222221111111222233333 4555555567777776655543
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.6e-14 Score=143.63 Aligned_cols=112 Identities=15% Similarity=0.197 Sum_probs=92.5
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC-CCEEEEEeCCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~-~~~laS~s~D~ 679 (720)
.-|.||+..|.||+|++|...|+|||.|++|++||.-... .|.+.+-.+++.|+||+|+|.. ..+|+|+|.|+
T Consensus 99 ~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~c------k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk 172 (315)
T KOG0279|consen 99 RRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVC------KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK 172 (315)
T ss_pred EEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccE------EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc
Confidence 3467889999999999999999999999999999975541 1222332337789999999974 56999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEEc
Q 004989 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
||||||+++-+...+ ++.+++||+++...||-=|-..+|
T Consensus 173 tvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~L 218 (315)
T KOG0279|consen 173 TVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAML 218 (315)
T ss_pred eEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEE
Confidence 999999998876665 899999999999999976655554
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.2e-15 Score=145.39 Aligned_cols=195 Identities=16% Similarity=0.126 Sum_probs=144.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-c
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG-I 142 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g-I 142 (720)
.|.-.|.-+.||||+.+++ .|.... ...++..| +-++|...|... +-.++..++..++.+|+.|+.|||+.. +
T Consensus 236 eefp~lrifshpnilpvlg-acnspp---nlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ 311 (448)
T KOG0195|consen 236 EEFPALRIFSHPNILPVLG-ACNSPP---NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPM 311 (448)
T ss_pred hhCcceeeecCCchhhhhh-hccCCC---CceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchh
Confidence 4455677788999999999 555554 45777778 888999999433 334688899999999999999999853 3
Q ss_pred -eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 143 -VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 -vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
----|....++|+++-+.+|.= + .+-|.+
T Consensus 312 ipr~~lns~hvmidedltarism---a--------------------------------------d~kfsf--------- 341 (448)
T KOG0195|consen 312 IPRFYLNSKHVMIDEDLTARISM---A--------------------------------------DTKFSF--------- 341 (448)
T ss_pred hhhhhcccceEEecchhhhheec---c--------------------------------------cceeee---------
Confidence 3345777788888776666520 0 011100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC---Cccccchhhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV---SCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---s~~sDIwSLG 298 (720)
+..-..-.|.||+||.+...+- -.++|+|||.
T Consensus 342 ---------------------------------------------qe~gr~y~pawmspealqrkped~n~raadmwsfa 376 (448)
T KOG0195|consen 342 ---------------------------------------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFA 376 (448)
T ss_pred ---------------------------------------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHH
Confidence 0000234788999999987773 4589999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHH
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
+++|||-| ||....+...-|+...++..+...+...+....|+.-|+..||.+||..+.|+
T Consensus 377 illwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 377 ILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred HHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 99999999 99988877777777666655555555667778999999999999999987764
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.6e-14 Score=150.72 Aligned_cols=109 Identities=15% Similarity=0.259 Sum_probs=91.1
Q ss_pred cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCC--------CC
Q 004989 600 QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYI--------KS 670 (720)
Q Consensus 600 ~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~--------~~ 670 (720)
-..+.||.+.|+++.|+|.|.+|||||.|+|+|||...... .+..|.. ...|..+.|+|.+ +.
T Consensus 352 ~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~--------~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~ 423 (524)
T KOG0273|consen 352 VKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN--------SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNL 423 (524)
T ss_pred ceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc--------chhhhhhhccceeeEeecCCCCccCCCcCCc
Confidence 46788899999999999999999999999999999975531 1112222 3347778777754 35
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 671 QIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 671 ~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.|||++.|+||++||+..|+++.+ ||+++|+|.+.++++||||.-.
T Consensus 424 ~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V 476 (524)
T KOG0273|consen 424 MLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCV 476 (524)
T ss_pred eEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCee
Confidence 799999999999999999999987 8999999999999999999754
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.2e-15 Score=149.06 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=76.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCC----CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAA----IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~----~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.++|+..+.++.||+|..+.+.+...... ....+++||| .|.+|.++.. +++ ....+|+.+|..+|
T Consensus 82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH 152 (232)
T PRK10359 82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH 152 (232)
T ss_pred HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH
Confidence 35787889999999999998833322211 2347999999 9999998741 333 34669999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCccc
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
..|++|||+||+||+++++| ++++|||...
T Consensus 153 ~~gi~H~Dikp~Nili~~~g-i~liDfg~~~ 182 (232)
T PRK10359 153 QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKR 182 (232)
T ss_pred HcCCccCCCChHHEEEeCCC-EEEEECCCcc
Confidence 99999999999999999888 9999998763
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.5e-14 Score=157.12 Aligned_cols=114 Identities=15% Similarity=0.106 Sum_probs=94.9
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+| |+.+|||||.|++|+|||+...... .....|+..+. |..+|.+|+|+|...++||||+.|++
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~-~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLT-QNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccc-cccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 567899999999999 8999999999999999998754110 11123555554 46789999999977789999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+|||+.+++.+.. |++++|++.+..+++|+.|....
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~Ir 193 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLN 193 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEE
Confidence 99999999988765 89999999999999999986543
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.3e-14 Score=157.96 Aligned_cols=108 Identities=10% Similarity=0.123 Sum_probs=93.6
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.+.+|...|++|+|+|||++++||+.|++|||||..... .+..+..+|...|+||+|+|.+ +.|+||++|++|
T Consensus 198 ~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~------~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tv 270 (456)
T KOG0266|consen 198 ELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG------RNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTV 270 (456)
T ss_pred cccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC------eEEEEecCCCCceEEEEecCCC-CEEEEecCCCcE
Confidence 457889999999999999999999999999999983221 1223344678889999999977 899999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|||+++|+++.. |.+++|++.+..+.+++.|...
T Consensus 271 riWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i 312 (456)
T KOG0266|consen 271 RIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTI 312 (456)
T ss_pred EEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccE
Confidence 9999999999887 8999999999999999988654
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.9e-14 Score=143.37 Aligned_cols=99 Identities=9% Similarity=0.099 Sum_probs=77.5
Q ss_pred hhhhhhcccC-----CCCCceecccceeecCCCCCc-EEEEEecCC---CCHHHHHhCCCCCCCHHHHHHHHHHHHHHH-
Q 004989 65 HSDGVELTHG-----DHLRNQGGLSGVCENEAAIDP-FVHAIEWGD---VSLRQWLDKPKRSVDVYECLHIFRQIVEIV- 134 (720)
Q Consensus 65 ~~e~~~L~~l-----~HpnIV~l~~~~~~~~~~~~~-~~lv~E~~g---gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL- 134 (720)
.+|+.++.++ +||||+++|+ +++++..... +.+||||.| ++|.+++.+. .+++. ..++.|++.++
T Consensus 44 ~rEi~~l~~L~~~~~~h~nIvr~yg-~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~ 118 (210)
T PRK10345 44 RRELKYYAHLSRRLIDWSGIPRYYG-TVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLK 118 (210)
T ss_pred HHHHHHHHHhhccCCCCcccceeeE-EEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHH
Confidence 4777788888 6899999999 6666543334 447899944 8999999553 26655 36688888888
Q ss_pred HHHHHCCceeccCCCCcEEEccC----CceEEeecCcc
Q 004989 135 YAAHSQGIVVHNVRPSCFVMSSF----NHVSFIESASC 168 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~----~~vkliDfg~a 168 (720)
+|||+++||||||||+|||++.. .+++|+||+.+
T Consensus 119 ~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 119 RYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999999999999743 37999995554
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.6e-13 Score=149.96 Aligned_cols=198 Identities=17% Similarity=0.256 Sum_probs=144.3
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCC
Q 004989 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI-VVHNVR 148 (720)
Q Consensus 71 L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI-vHrDLK 148 (720)
|.++.|.|+.++++.++. + ..++++.+| .-|+|.+.+......++..-...++++|+.||.|||.-.| .|+.|+
T Consensus 1 l~~l~h~n~~~f~g~~~~-~---~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD-G---PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEec-C---CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeec
Confidence 467899999999995444 4 367999999 8899999997767778999999999999999999998766 999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccC
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
+.|.+++..-.+|+.|||+....... .++..
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~---------------------------------~~~~~---------------- 107 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEET---------------------------------AEPEA---------------- 107 (484)
T ss_pred cccceeeeeEEEEechhhhccccccc---------------------------------ccccc----------------
Confidence 99999999999999888876322100 00000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-------CCccccchhhhchh
Q 004989 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-------VSCASDIYRLGVLL 301 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~s~~sDIwSLGvll 301 (720)
.....-...|.|||.+.+.. .+.+.||||+|+++
T Consensus 108 ---------------------------------------~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 108 ---------------------------------------HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred ---------------------------------------cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 00011244689999997742 36789999999999
Q ss_pred hhccc---cCCCCc---hHHHHHHHhhc-CC--CCcccc-c-cCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGE---EKTRTMSSLRH-RV--LPPQLL-L-KFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~---~~~~~~~~l~~-~~--~p~~~~-~-~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+++ ||.... ...+....+.+ +. +.|... . ..+ ....++..||..+|..||+++.+-.
T Consensus 149 ~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 149 YEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 99999 776531 11233333443 21 222222 1 333 3558999999999999999988754
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.8e-14 Score=156.59 Aligned_cols=119 Identities=9% Similarity=0.165 Sum_probs=102.4
Q ss_pred ccccceEEeeeec-c--CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEE
Q 004989 587 LSFSKLRVKADLN-Q--GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSI 662 (720)
Q Consensus 587 ~~~~~~~~~~~l~-~--~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l 662 (720)
....+.+++++-+ + +-+-||-+-|.||+|+|+..|+||||.|+++|+||..++. .|..+. |++.|++|
T Consensus 512 s~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~--------~VRiF~GH~~~V~al 583 (707)
T KOG0263|consen 512 SHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGN--------SVRIFTGHKGPVTAL 583 (707)
T ss_pred CCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCc--------EEEEecCCCCceEEE
Confidence 4455667777766 2 4577899999999999999999999999999999998872 355554 48889999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|||. |.+||||+.||.|+|||+.+|..+.+ ++++.|++.+.++++|+.|-
T Consensus 584 ~~Sp~-Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~Dn 641 (707)
T KOG0263|consen 584 AFSPC-GRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADN 641 (707)
T ss_pred EEcCC-CceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCC
Confidence 99995 56999999999999999999988875 99999999999999999874
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.7e-13 Score=153.06 Aligned_cols=126 Identities=17% Similarity=0.165 Sum_probs=95.9
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE
Q 004989 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI 662 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l 662 (720)
+++...+...+.. +.+|.+.|.+|+|+|+ +.+|||||.|++|+|||+.+..........|+..+ .|...|.+|
T Consensus 57 ~L~~~~r~~~v~~-----L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sV 131 (568)
T PTZ00420 57 RLENQMRKPPVIK-----LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISII 131 (568)
T ss_pred EeeecCCCceEEE-----EcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEE
Confidence 4444444444444 4567999999999997 78999999999999999875311111111244444 346789999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|.+..+||||+.|++|+|||+++++.+.+ |++++|++.+..++.++-|..
T Consensus 132 af~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~ 190 (568)
T PTZ00420 132 DWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKH 190 (568)
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCE
Confidence 99998777789999999999999999987654 899999999999998887753
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.1e-13 Score=143.46 Aligned_cols=90 Identities=20% Similarity=0.357 Sum_probs=74.9
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----cCCCCEEEEEEec
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----ASRSKLSSICWNS 666 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~i~~l~w~~ 666 (720)
-||-..+++ .|+..|+||.|+|||++|||+|.||+|.|||-.++. -+.++ .|.+.|..|+|+|
T Consensus 179 PFKFk~s~r-----~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge--------~vg~l~~~~aHkGsIfalsWsP 245 (603)
T KOG0318|consen 179 PFKFKSSFR-----EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGE--------KVGELEDSDAHKGSIFALSWSP 245 (603)
T ss_pred Ceeeeeccc-----ccccceeeEEECCCCCeEEEecCCccEEEEcCCCcc--------EEEEecCCCCccccEEEEEECC
Confidence 345555665 358899999999999999999999999999987762 23333 3578899999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004989 667 YIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
+. .+++|+|.|+++|||||.+++++++
T Consensus 246 Ds-~~~~T~SaDkt~KIWdVs~~slv~t 272 (603)
T KOG0318|consen 246 DS-TQFLTVSADKTIKIWDVSTNSLVST 272 (603)
T ss_pred CC-ceEEEecCCceEEEEEeeccceEEE
Confidence 65 6999999999999999999999886
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.1e-13 Score=151.40 Aligned_cols=127 Identities=13% Similarity=0.179 Sum_probs=104.0
Q ss_pred hhhhhccccceEEeeeecc----CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCC
Q 004989 582 GLCKYLSFSKLRVKADLNQ----GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASR 656 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~----~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 656 (720)
.|...+...++|+++.... ..+.+|.+.|+||+|+|+|+++++||.|++|||||+.++ .++..+ .|.
T Consensus 217 ~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~--------~~~~~l~~hs 288 (456)
T KOG0266|consen 217 YLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG--------ECVRKLKGHS 288 (456)
T ss_pred EEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC--------eEEEeeeccC
Confidence 3555566666776666222 456788999999999999999999999999999999885 244433 346
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc--EEEE---------EEEEeecCCceEEEecCcc-ceEE
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI--YFSA---------LYCIVLNKLLIIFRYGMFQ-EVKY 717 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~--~~~~---------v~~v~~~~~~~~~~~~~~~-~~~~ 717 (720)
+.|++++|+++ +++|+++++|++|+|||+.+|+ ++.+ ++++.|+|.+.++..+..| .+++
T Consensus 289 ~~is~~~f~~d-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~ 360 (456)
T KOG0266|consen 289 DGISGLAFSPD-GNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKL 360 (456)
T ss_pred CceEEEEECCC-CCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEE
Confidence 78999999995 5799999999999999999999 4443 6999999999999999999 6666
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.6e-14 Score=164.61 Aligned_cols=217 Identities=13% Similarity=0.157 Sum_probs=156.4
Q ss_pred ccchhhchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHH
Q 004989 58 NDFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 58 ~~~~~r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL 134 (720)
.+...+.-.|..+-..+. |+|++++++ ........++.++| .|+++.+.+ .......+...+..++.|+..+|
T Consensus 61 ~~~~~~i~~e~~~~~~~s~h~n~~~~~~----~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l 136 (601)
T KOG0590|consen 61 EDSSEHIDTETDIQKKLSKHSNTVHMIE----PSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGL 136 (601)
T ss_pred cchhhhcCccccccccccccccccccCC----ccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCc
Confidence 333444445555555566 999999999 33444467999999 999999988 44443578889999999999999
Q ss_pred HHHH-HCCceeccCCCCcEEEccCC-ceEEeecCcccCCCC-CCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 135 YAAH-SQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 135 ~yLH-s~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.|+| ..++.||||||+|.+++.++ .+++.|||++..+.. ...+
T Consensus 137 ~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~---------------------------------- 182 (601)
T KOG0590|consen 137 SYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAE---------------------------------- 182 (601)
T ss_pred cccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcc----------------------------------
Confidence 9999 99999999999999999988 888888887744322 1000
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc-CCcccCcccccCCC-CC
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME-TNWYASPEELAGAP-VS 289 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~-~s 289 (720)
......+| ++.|+|||...+.. ..
T Consensus 183 ------------------------------------------------------~~~~~~~g~s~~y~a~E~~~~~~~~~ 208 (601)
T KOG0590|consen 183 ------------------------------------------------------RSLKDRCGSSPPYGAPEHLSGKAYRG 208 (601)
T ss_pred ------------------------------------------------------eeeecccCCCCCCCCcccccchhhcC
Confidence 00112467 99999999998854 68
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHH-HHHhhcC-C-CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRT-MSSLRHR-V-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~-~~~l~~~-~-~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+..|+||+|+++.-+++ |+......... ....... . ....+........+++.++|..+|..|.+.+++-.+||
T Consensus 209 ~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~ 288 (601)
T KOG0590|consen 209 PSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNW 288 (601)
T ss_pred CCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccccc
Confidence 89999999999999998 43322111111 1111111 1 11222233445569999999999999999999999999
Q ss_pred cCC
Q 004989 364 LNE 366 (720)
Q Consensus 364 ~~~ 366 (720)
+..
T Consensus 289 ~~~ 291 (601)
T KOG0590|consen 289 LSS 291 (601)
T ss_pred ccc
Confidence 998
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2e-13 Score=152.35 Aligned_cols=127 Identities=13% Similarity=0.063 Sum_probs=104.4
Q ss_pred hhhhhhccccceEEeeeecc---CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCC
Q 004989 581 EGLCKYLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~---~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 656 (720)
.-|..+...++.|.+.-... -.+.||...|+.|.|+|.|-||||||.|++.++|..... +|...+ +|-
T Consensus 464 rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~--------~PlRifaghl 535 (707)
T KOG0263|consen 464 RFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHN--------KPLRIFAGHL 535 (707)
T ss_pred cceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccC--------Cchhhhcccc
Confidence 33555555555555554442 346689999999999999999999999999999997654 577554 457
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+.|.|+.|.|+ .+++|+||.|+|||+||+.+|..++- |.+++|+|++-++++|+=|-+.
T Consensus 536 sDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I 601 (707)
T KOG0263|consen 536 SDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLI 601 (707)
T ss_pred cccceEEECCc-ccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcE
Confidence 78999999995 67999999999999999999999875 8999999999999999877543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.46 E-value=3e-13 Score=138.52 Aligned_cols=195 Identities=15% Similarity=0.129 Sum_probs=140.6
Q ss_pred CCcccccccccC----CCCCCcccccccccCCCCccchhhch-hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec
Q 004989 28 SSRALNISGVSD----RNPRLLRGERFGVRGDDSNDFELRKH-SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW 102 (720)
Q Consensus 28 ~~~~~~~~~~~~----~~~~~~~~~r~~~~~~~~~~~~~r~~-~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~ 102 (720)
-++.+|-+.|+. .|.-.+.-.-|.|-...+..-.+|.| |--.+|. .-++|..+|. .+..+-+-.+|||+
T Consensus 32 VGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~--g~~GIP~vYY----FGqeG~~NiLVidL 105 (449)
T KOG1165|consen 32 VGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLG--GTEGIPQVYY----FGQEGKYNILVIDL 105 (449)
T ss_pred eccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHc--CCCCCCceee----eccccchhhhhhhh
Confidence 344555555443 33333333334455555555556666 5555665 4788888776 33333455899999
Q ss_pred CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccC-----CceEEeecCcccCCCCCCcc
Q 004989 103 GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHE 177 (720)
Q Consensus 103 ~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~ 177 (720)
.|.+|.|++.--++.++...+..++.|++.-++|+|++.+|.|||||+|+||... +.+.++|||+|+.+..+...
T Consensus 106 LGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tk 185 (449)
T KOG1165|consen 106 LGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTK 185 (449)
T ss_pred hCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcccc
Confidence 9999999987778889999999999999999999999999999999999999743 45888999888765444221
Q ss_pred cccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhh
Q 004989 178 EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV 257 (720)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 257 (720)
. +++..|.
T Consensus 186 q--------------------------------------------------------HIPYrE~---------------- 193 (449)
T KOG1165|consen 186 Q--------------------------------------------------------HIPYREH---------------- 193 (449)
T ss_pred c--------------------------------------------------------cCccccc----------------
Confidence 1 1111111
Q ss_pred hcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCC
Q 004989 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 311 (720)
Q Consensus 258 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~ 311 (720)
....||..||+---..|...+..-|+=|||-++++.|- ||.+.
T Consensus 194 -----------KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 194 -----------KSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred -----------cccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 12579999999998889989999999999988888777 66653
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-14 Score=150.56 Aligned_cols=157 Identities=20% Similarity=0.318 Sum_probs=97.5
Q ss_pred EEEEEecCCCCHHHHHh---CCCC---CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCccc
Q 004989 96 FVHAIEWGDVSLRQWLD---KPKR---SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 96 ~~lv~E~~ggsL~~~L~---~~~~---~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
.+++|+-..++|.+++. .... .+.....+.+..|++..+++||+.||||+||||+||+++.+|.+.|.||+...
T Consensus 114 ~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~ 193 (288)
T PF14531_consen 114 RFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLV 193 (288)
T ss_dssp EEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEE
T ss_pred hhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHe
Confidence 47788887889988862 1111 12333445666999999999999999999999999999999999998876553
Q ss_pred CCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccc
Q 004989 170 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 249 (720)
Q Consensus 170 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d 249 (720)
..|....
T Consensus 194 r~g~~~~------------------------------------------------------------------------- 200 (288)
T PF14531_consen 194 RAGTRYR------------------------------------------------------------------------- 200 (288)
T ss_dssp ETTEEEE-------------------------------------------------------------------------
T ss_pred ecCceee-------------------------------------------------------------------------
Confidence 2211100
Q ss_pred cccchhhhhcccCCCCccccccccCCcccCcccccCC--------CCCccccchhhhchhhhccc---cCCCCchHHHHH
Q 004989 250 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTM 318 (720)
Q Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--------~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~ 318 (720)
....+..|.+||..... .++.+.|.|+||+++|.|+| ||..........
T Consensus 201 --------------------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~ 260 (288)
T PF14531_consen 201 --------------------CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPE 260 (288)
T ss_dssp --------------------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG
T ss_pred --------------------ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccc
Confidence 01224678899877432 37899999999999999999 776543221100
Q ss_pred HHhhcCCCCccccccCchH-HHHHHHcCCCCCCCC
Q 004989 319 SSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGR 352 (720)
Q Consensus 319 ~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~R 352 (720)
..+... . ..|+. ..||..||+++|.+|
T Consensus 261 ~~f~~C------~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 261 WDFSRC------R-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GGGTTS------S----HHHHHHHHHHT-SSGGGS
T ss_pred ccchhc------C-CcCHHHHHHHHHHccCCcccC
Confidence 011111 1 23433 489999999999988
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2e-13 Score=153.61 Aligned_cols=112 Identities=16% Similarity=0.312 Sum_probs=90.6
Q ss_pred CCCC-CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc----------------------------ccc----c-----
Q 004989 601 GDLL-NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA----------------------------IIN----E----- 642 (720)
Q Consensus 601 ~~~~-~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~----------------------------~~~----~----- 642 (720)
.++. .|.+.|.++.|++||+||||||.|+.||||.+.. ... .
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3455 7899999999999999999999999999998644 000 0
Q ss_pred -----cccc----------ccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEee
Q 004989 643 -----NRDI----------HYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVL 700 (720)
Q Consensus 643 -----~~~~----------~~~~~~-~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~ 700 (720)
...+ ..|+.+ ++|...|..|+||.+ ++|.|+|.|+|||||++.+.+|+.. |+||+|
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn--~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaF 417 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN--NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAF 417 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccC--CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEe
Confidence 0001 124444 356778999999984 5999999999999999999999998 899999
Q ss_pred cCC-ceEEEecCccc
Q 004989 701 NKL-LIIFRYGMFQE 714 (720)
Q Consensus 701 ~~~-~~~~~~~~~~~ 714 (720)
+|. ..++.+||+|-
T Consensus 418 nPvDDryFiSGSLD~ 432 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDG 432 (712)
T ss_pred cccCCCcEeeccccc
Confidence 996 58999999984
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-13 Score=136.77 Aligned_cols=101 Identities=10% Similarity=0.069 Sum_probs=78.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA-HSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL-Hs~gIv 143 (720)
.|..+|.++.|++|...+. .. .. ..++|||| .|++|...+... ..++..++..++.||+.+|.|+ |+.||+
T Consensus 68 ~E~~~l~~l~~~~v~~p~~-~~-~~----~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H~~gii 140 (190)
T cd05147 68 KEMRNLKRLVTAGIPCPEP-IL-LK----SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQDCRLV 140 (190)
T ss_pred HHHHHHHHHHHCCCCCCcE-EE-ec----CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5778888888888744333 21 11 12799999 666665543232 3589999999999999999999 799999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCC
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSD 174 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~ 174 (720)
||||||+|||++ ++.++|+|||++...+.+
T Consensus 141 HrDlkP~NIli~-~~~v~LiDFG~a~~~~~~ 170 (190)
T cd05147 141 HADLSEYNLLYH-DGKLYIIDVSQSVEHDHP 170 (190)
T ss_pred cCCCCHHHEEEE-CCcEEEEEccccccCCCc
Confidence 999999999998 588999999999654433
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.2e-13 Score=131.67 Aligned_cols=106 Identities=12% Similarity=0.215 Sum_probs=89.6
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
|.||++.|..|+.++||.++.|||.|+++|+||+.++ .+... .+|...|.+|+|||+. .+|+|||.|+||
T Consensus 59 ~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g--------~~t~~f~GH~~dVlsva~s~dn-~qivSGSrDkTi 129 (315)
T KOG0279|consen 59 LTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATG--------ESTRRFVGHTKDVLSVAFSTDN-RQIVSGSRDKTI 129 (315)
T ss_pred eeccceEecceEEccCCceEEeccccceEEEEEecCC--------cEEEEEEecCCceEEEEecCCC-ceeecCCCccee
Confidence 5678999999999999999999999999999999886 23433 3456679999999975 589999999999
Q ss_pred EEEECCCCcEEEE--------EEEEeecCC--ceEEEecCccceEE
Q 004989 682 QVGQVLHLIYFSA--------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWD~~tg~~~~~--------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
+|||+-.+....- |.||.|+|. ..+|++++-|+.-.
T Consensus 130 klwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvK 175 (315)
T KOG0279|consen 130 KLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVK 175 (315)
T ss_pred eeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEE
Confidence 9999976543321 899999999 89999999998643
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.6e-13 Score=141.08 Aligned_cols=127 Identities=14% Similarity=0.149 Sum_probs=100.6
Q ss_pred cchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-C
Q 004989 577 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-S 655 (720)
Q Consensus 577 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~ 655 (720)
++-..+..|||.-+ +.++.... -+|+..|.+++|+|....|+|||.|++|+|||+....++ ..+. |
T Consensus 155 SgD~gG~iKyWqpn-mnnVk~~~----ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee--------~vL~GH 221 (464)
T KOG0284|consen 155 SGDKGGMIKYWQPN-MNNVKIIQ----AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEE--------RVLRGH 221 (464)
T ss_pred EcCCCceEEecccc-hhhhHHhh----HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchh--------heeccC
Confidence 33344577888764 33333332 135789999999999999999999999999998765322 1223 3
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.-.|.||.|.|. +..|||+|.|..||+||.++|.|+.+ |..+.|++.++.+.++|=|..-.
T Consensus 222 gwdVksvdWHP~-kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~k 289 (464)
T KOG0284|consen 222 GWDVKSVDWHPT-KGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCK 289 (464)
T ss_pred CCCcceeccCCc-cceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEE
Confidence 556999999995 67999999999999999999999987 89999999999999999987643
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-12 Score=127.26 Aligned_cols=105 Identities=15% Similarity=0.122 Sum_probs=90.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
|..+.+.|..+.|+.||.|.+|+|.|++||+|+...+. .+.+.. |...|..++-+.+. ..+|||+.|+.|
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~--------liktYsghG~EVlD~~~s~Dn-skf~s~GgDk~v 83 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA--------LIKTYSGHGHEVLDAALSSDN-SKFASCGGDKAV 83 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEeecccccc--------eeeeecCCCceeeeccccccc-cccccCCCCceE
Confidence 44568999999999999999999999999999986652 344443 45569999888754 589999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.+|||.||+.++. |+.|.||+..+++.+||||--.
T Consensus 84 ~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~ 125 (307)
T KOG0316|consen 84 QVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSV 125 (307)
T ss_pred EEEEcccCeeeeecccccceeeEEEecCcceEEEecccccee
Confidence 9999999999886 9999999999999999999643
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.8e-13 Score=133.00 Aligned_cols=100 Identities=13% Similarity=0.096 Sum_probs=78.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHH-HHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CC
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQ-WLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~-~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
.+|...+.++.|++|..... +.... .|+|||| .|+++.. .+.. ..++..++..++.|++.+|.++|+ +|
T Consensus 67 ~~E~~~l~~l~~~~i~~p~~-~~~~~-----~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~g 138 (190)
T cd05145 67 EKEFRNLKRLYEAGVPVPEP-ILLKK-----NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAG 138 (190)
T ss_pred HHHHHHHHHHHhCCCCCceE-EEecC-----CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 46778888999998754333 11111 3799999 6665443 3432 347889999999999999999999 99
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 173 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~ 173 (720)
|+||||||+|||++ ++.++|+|||++.....
T Consensus 139 ivHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 139 LVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 99999999999998 89999999999966543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.6e-12 Score=143.84 Aligned_cols=85 Identities=20% Similarity=0.301 Sum_probs=73.9
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
...+|...+.|++++|||+++|||+.|++|||||..++. |-++.-.|++.|+.++|.. .++.|.|+|-||||
T Consensus 345 KQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf-------C~vTFteHts~Vt~v~f~~-~g~~llssSLDGtV 416 (893)
T KOG0291|consen 345 KQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF-------CFVTFTEHTSGVTAVQFTA-RGNVLLSSSLDGTV 416 (893)
T ss_pred eccccccceeeEEECCCCcEEEeccCCCcEEEEeccCce-------EEEEeccCCCceEEEEEEe-cCCEEEEeecCCeE
Confidence 346789999999999999999999999999999988763 4455556788999999998 46799999999999
Q ss_pred EEEECCCCcEEEE
Q 004989 682 QVGQVLHLIYFSA 694 (720)
Q Consensus 682 ~lWD~~tg~~~~~ 694 (720)
|.||+....+.++
T Consensus 417 RAwDlkRYrNfRT 429 (893)
T KOG0291|consen 417 RAWDLKRYRNFRT 429 (893)
T ss_pred Eeeeecccceeee
Confidence 9999988877775
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=9e-13 Score=130.86 Aligned_cols=92 Identities=12% Similarity=0.126 Sum_probs=76.3
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. |++|+++++ + . ..|++||| .|.+|.+.+.. ....++.|++.+|.++|++
T Consensus 47 l~~rE~~iL~~L~~~~~vP~ll~-~---~----~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~ 110 (218)
T PRK12274 47 LARREALALRQLDGLPRTPRLLH-W---D----GRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRC 110 (218)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEE-E---c----CEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHC
Confidence 4568999999995 478999888 2 1 35899999 99999764411 1235789999999999999
Q ss_pred CceeccC-CCCcEEEccCCceEEeecCcccC
Q 004989 141 GIVVHNV-RPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 141 gIvHrDL-KP~NILl~~~~~vkliDfg~a~~ 170 (720)
||+|||| ||+|||++.++.++|+|||++..
T Consensus 111 GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 111 GVAHNDLAKEANWLVQEDGSPAVIDFQLAVR 141 (218)
T ss_pred cCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence 9999999 79999999999999999999964
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.5e-13 Score=144.20 Aligned_cols=127 Identities=13% Similarity=0.126 Sum_probs=103.6
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec
Q 004989 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 654 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 654 (720)
|.+-.+-+.|+|.|.+- ++.- -.++||++.|.+|+|+| |...|||||.|+|||||.+.+. .|..++.
T Consensus 113 LtsSDDm~iKlW~we~~--wa~~--qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~--------~~nfTl~ 180 (794)
T KOG0276|consen 113 LTSSDDMTIKLWDWENE--WACE--QTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSP--------HPNFTLE 180 (794)
T ss_pred EecCCccEEEEeeccCc--eeee--eEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCC--------CCceeee
Confidence 44455667888888532 2222 34889999999999998 5678999999999999998665 2555554
Q ss_pred C-CCCEEEEEEec-CCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 655 S-RSKLSSICWNS-YIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 655 ~-~~~i~~l~w~~-~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+ ...|+||++-+ .++.+|+||+.|.+|||||.+|.+|+++ |.++.|+|...+|.+||=|-
T Consensus 181 gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDG 249 (794)
T KOG0276|consen 181 GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDG 249 (794)
T ss_pred ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCc
Confidence 4 55699999976 3467999999999999999999999998 89999999999999999774
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-12 Score=128.64 Aligned_cols=135 Identities=19% Similarity=0.213 Sum_probs=104.4
Q ss_pred cEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc---cCCceEEeecCcccCC
Q 004989 95 PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDS 171 (720)
Q Consensus 95 ~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~---~~~~vkliDfg~a~~~ 171 (720)
+-.+||++.|.+|.+++.--.+.++...++.++-|++.-|+|+|.+++|||||||+|+|+. ..+.+.+||||+++.+
T Consensus 85 ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 85 YNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred cceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 4589999999999998865556699999999999999999999999999999999999996 4567899999988654
Q ss_pred CCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 004989 172 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 251 (720)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g 251 (720)
-..... .+++..++
T Consensus 165 ~d~~t~--------------------------------------------------------~HIpyre~---------- 178 (341)
T KOG1163|consen 165 RDIRTR--------------------------------------------------------QHIPYRED---------- 178 (341)
T ss_pred cccccc--------------------------------------------------------ccCccccC----------
Confidence 221110 11111111
Q ss_pred cchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCc
Q 004989 252 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE 312 (720)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~ 312 (720)
....||..|.+--...+...+..-|+=|+|-+|.++.- ||.+..
T Consensus 179 -----------------r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 179 -----------------RNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred -----------------CccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 22689999999888888778899999999966655444 777653
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.38 E-value=3e-12 Score=131.62 Aligned_cols=119 Identities=13% Similarity=0.176 Sum_probs=98.3
Q ss_pred ccceEEeeeec---cCCCCCCCCCeEEEEECCC---------------CCEEEEeeCCCcEEEeeCCcccccccccccce
Q 004989 589 FSKLRVKADLN---QGDLLNSSNLVCSLSFDRD---------------GELFAAAGVNKKIKVFECDAIINENRDIHYPV 650 (720)
Q Consensus 589 ~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~d---------------g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~ 650 (720)
..+++++-.-. -..|..|...|-||+|-|+ |+++++||.||+||+||+.++. |..
T Consensus 256 dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~-------cL~ 328 (406)
T KOG0295|consen 256 DQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM-------CLF 328 (406)
T ss_pred CceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe-------EEE
Confidence 34555544332 1456778999999999654 2588999999999999999872 444
Q ss_pred EEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 651 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 651 ~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+..+|.++|+.++|+| +|.+|+|+..|+|++|||+.+++|..+ |+|++|....-+.++|+.|+-
T Consensus 329 tL~ghdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt 399 (406)
T KOG0295|consen 329 TLVGHDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQT 399 (406)
T ss_pred EEecccceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccce
Confidence 5566788999999999 567999999999999999999999997 899999999999999999863
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.1e-12 Score=133.37 Aligned_cols=128 Identities=13% Similarity=0.128 Sum_probs=100.1
Q ss_pred hhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE-EecCCC
Q 004989 579 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRS 657 (720)
Q Consensus 579 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~ 657 (720)
-.+...+-|...+.+.+.++.. .-..+||+.+|...+||+||.|+.||+||.+++. ..-+.. ..+|.+
T Consensus 278 SwDHTIk~WDletg~~~~~~~~------~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~-----gs~v~~s~~gH~n 346 (423)
T KOG0313|consen 278 SWDHTIKVWDLETGGLKSTLTT------NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGD-----GSVVSQSLIGHKN 346 (423)
T ss_pred cccceEEEEEeecccceeeeec------CcceeEeecccccceeeecCCCCceeecCCCCCC-----CceeEEeeecchh
Confidence 3444555555555555555543 4678999999999999999999999999999872 222333 356688
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-EEEE-------EEEEeecCCceEEEecCccceEEc
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI-YFSA-------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~-~~~~-------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
.|+.|.|+|-+-.+|+|+|||++|||||+++-+ .+.+ |+||+|+.. .+|++|..|.-.+.
T Consensus 347 wVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~-~~IvSGGaD~~l~i 414 (423)
T KOG0313|consen 347 WVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG-GLIVSGGADNKLRI 414 (423)
T ss_pred hhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC-ceEEeccCcceEEE
Confidence 999999999999999999999999999999887 6665 899999975 46788888865543
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.6e-12 Score=131.60 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=93.4
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
+-+.+|.+||.||+++|-++.|||||.|++|+|||++++. ....++ |-..|..|++|+-+ .||-|++.|+
T Consensus 145 rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~--------LkltltGhi~~vr~vavS~rH-pYlFs~gedk 215 (460)
T KOG0285|consen 145 RVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ--------LKLTLTGHIETVRGVAVSKRH-PYLFSAGEDK 215 (460)
T ss_pred hhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe--------EEEeecchhheeeeeeecccC-ceEEEecCCC
Confidence 3466789999999999999999999999999999999872 222333 46779999999966 4999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.||-||+...+.|+. |+|++..|..-.+.+|+=|-+..
T Consensus 216 ~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~R 260 (460)
T KOG0285|consen 216 QVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIR 260 (460)
T ss_pred eeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEE
Confidence 999999999998876 99999999999999999887653
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.4e-13 Score=140.04 Aligned_cols=107 Identities=14% Similarity=0.174 Sum_probs=92.0
Q ss_pred CCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 601 GDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
..+.||+..|+++.|-| .+.+|++||.|++|+|||+..- .+|-.+.+.|+..|..++||+. +..+.|+|||+
T Consensus 208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~------~~~lrtf~gH~k~Vrd~~~s~~-g~~fLS~sfD~ 280 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD------RRCLRTFKGHRKPVRDASFNNC-GTSFLSASFDR 280 (503)
T ss_pred eeccCCccccchhhhccceeeEEEecCCCceEEEEEEecC------cceehhhhcchhhhhhhhcccc-CCeeeeeecce
Confidence 35678899999999999 9999999999999999997552 2233344566777999999985 56889999999
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCc-eEEEecCccc
Q 004989 680 VVQVGQVLHLIYFSA------LYCIVLNKLL-IIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------v~~v~~~~~~-~~~~~~~~~~ 714 (720)
+||+||++||+++.. ++||.|+|.. +++.-|++|.
T Consensus 281 ~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ 322 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDK 322 (503)
T ss_pred eeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCC
Confidence 999999999999987 7999999999 9999999886
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.6e-12 Score=125.23 Aligned_cols=87 Identities=15% Similarity=0.087 Sum_probs=70.1
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
..+.||.+.|+.+.|+|||.+|||||.|+.|-+|+...-++... +.-.|.+.|..|.|+++ +++|.|++.|++
T Consensus 41 m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~------~lkgHsgAVM~l~~~~d-~s~i~S~gtDk~ 113 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFW------VLKGHSGAVMELHGMRD-GSHILSCGTDKT 113 (338)
T ss_pred hhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecccccccee------eeccccceeEeeeeccC-CCEEEEecCCce
Confidence 45678999999999999999999999999999999533211111 11145778999999994 679999999999
Q ss_pred EEEEECCCCcEEEE
Q 004989 681 VQVGQVLHLIYFSA 694 (720)
Q Consensus 681 v~lWD~~tg~~~~~ 694 (720)
|+.||++||+++..
T Consensus 114 v~~wD~~tG~~~rk 127 (338)
T KOG0265|consen 114 VRGWDAETGKRIRK 127 (338)
T ss_pred EEEEecccceeeeh
Confidence 99999999998874
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.3e-11 Score=138.54 Aligned_cols=103 Identities=11% Similarity=0.119 Sum_probs=84.9
Q ss_pred CCCCCCCeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+|++.. |||||.|++|+|||+++.. .+..+.+...|.+++|+|+ +++||+++.|++|
T Consensus 121 L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~--------~~~~i~~~~~V~Slswspd-G~lLat~s~D~~I 191 (568)
T PTZ00420 121 LKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK--------RAFQINMPKKLSSLKWNIK-GNLLSGTCVGKHM 191 (568)
T ss_pred eecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc--------EEEEEecCCcEEEEEECCC-CCEEEEEecCCEE
Confidence 4577899999999999985 6899999999999998762 2333445567999999995 5699999999999
Q ss_pred EEEECCCCcEEEE------------EEEEeecCCceEEEecCccc
Q 004989 682 QVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg~~~~~------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|||+++++.+.+ +++..|++....+.++.||.
T Consensus 192 rIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~ 236 (568)
T PTZ00420 192 HIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSK 236 (568)
T ss_pred EEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCC
Confidence 9999999988765 35556778888899988884
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=136.39 Aligned_cols=125 Identities=15% Similarity=0.196 Sum_probs=108.0
Q ss_pred hhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCC
Q 004989 579 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRS 657 (720)
Q Consensus 579 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~ 657 (720)
-.+.++|.|+.-.+++.++|+ ||...|.||.|+|..+++||+|.|+|||||.+.+. .++..+. |.+
T Consensus 482 SqDktaKiW~le~~~l~~vLs-----GH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f--------SClkT~eGH~~ 548 (775)
T KOG0319|consen 482 SQDKTAKIWDLEQLRLLGVLS-----GHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF--------SCLKTFEGHTS 548 (775)
T ss_pred ccccceeeecccCceEEEEee-----CCccceEEEEeccccceeEeccCCceEEEEEeccc--------eeeeeecCccc
Confidence 355688888888777777775 56999999999999999999999999999999887 3566665 578
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|..++|-.++ ..|+||+.||.||||++.|+.|+++ ||..+-++....+.+|.-|-+.-
T Consensus 549 aVlra~F~~~~-~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~ 614 (775)
T KOG0319|consen 549 AVLRASFIRNG-KQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRII 614 (775)
T ss_pred eeEeeeeeeCC-cEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEE
Confidence 89999998755 5899999999999999999999998 99999999999999988876543
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.6e-11 Score=119.62 Aligned_cols=116 Identities=11% Similarity=0.180 Sum_probs=89.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~ 669 (720)
..|+.+++| +||.+.|.||+|+++|.||||+|.||.|=||+..... +..|--+.-.|...|.-|.|.| ..
T Consensus 93 ~efecv~~l-----EGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~dedd----Efec~aVL~~HtqDVK~V~WHP-t~ 162 (312)
T KOG0645|consen 93 GEFECVATL-----EGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDD----EFECIAVLQEHTQDVKHVIWHP-TE 162 (312)
T ss_pred CceeEEeee-----eccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCC----cEEEEeeeccccccccEEEEcC-Cc
Confidence 456777776 6679999999999999999999999999999976321 1112112234567799999999 45
Q ss_pred CEEEEEeCCCcEEEEECCCC---cEEE-------EEEEEeecCCceEEEecCccce
Q 004989 670 SQIASSNFEGVVQVGQVLHL---IYFS-------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~tg---~~~~-------~v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+|+|+|||.|||+|+-..+ +|++ ||||++|++.+.-.++++-|--
T Consensus 163 dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~t 218 (312)
T KOG0645|consen 163 DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGT 218 (312)
T ss_pred ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcc
Confidence 69999999999999976622 3344 3999999999988788776643
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-11 Score=126.98 Aligned_cols=128 Identities=11% Similarity=0.105 Sum_probs=106.3
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-
Q 004989 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA- 654 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~- 654 (720)
+.+-.+.+.|+|..-.-++| +++.||-+.|.|++.+|.-+.|+|||.|.+|||||+++. .+|..|.
T Consensus 209 Fs~gedk~VKCwDLe~nkvI-----R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr--------~~V~~l~G 275 (460)
T KOG0285|consen 209 FSAGEDKQVKCWDLEYNKVI-----RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTR--------ASVHVLSG 275 (460)
T ss_pred EEecCCCeeEEEechhhhhH-----HHhccccceeEEEeccccceeEEecCCcceEEEeeeccc--------ceEEEecC
Confidence 44445567777776444444 335677899999999999999999999999999999987 3565665
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 655 ~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++.|..|.++|.+. .++|||.|+||++||++.|+...+ |.|++.+|..+.+++++-|-.|.
T Consensus 276 H~~~V~~V~~~~~dp-qvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~ 344 (460)
T KOG0285|consen 276 HTNPVASVMCQPTDP-QVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQ 344 (460)
T ss_pred CCCcceeEEeecCCC-ceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCcccee
Confidence 588899999999765 789999999999999999998776 88999999999999999887763
|
|
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.2e-11 Score=122.74 Aligned_cols=103 Identities=12% Similarity=0.208 Sum_probs=82.8
Q ss_pred CCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
.+-|++|+||| ..-++|.||.|++||+||+.... . -.|.....+.+.|.++||+.+ ++.+++|+.||.+|+||
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g-~----~~~ka~~~~~~PvL~v~Wsdd-gskVf~g~~Dk~~k~wD 100 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSG-Q----LVPKAQQSHDGPVLDVCWSDD-GSKVFSGGCDKQAKLWD 100 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCC-c----ccchhhhccCCCeEEEEEccC-CceEEeeccCCceEEEE
Confidence 46799999999 44567899999999999987630 0 123333345788999999985 57999999999999999
Q ss_pred CCCCcEEEE------EEEEeecCCce--EEEecCccce
Q 004989 686 VLHLIYFSA------LYCIVLNKLLI--IFRYGMFQEV 715 (720)
Q Consensus 686 ~~tg~~~~~------v~~v~~~~~~~--~~~~~~~~~~ 715 (720)
+.+||..+- |-+++|=+... ++++||+|+-
T Consensus 101 L~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKT 138 (347)
T KOG0647|consen 101 LASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKT 138 (347)
T ss_pred ccCCCeeeeeecccceeEEEEecCCCcceeEecccccc
Confidence 999987654 88889966666 9999999984
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.4e-11 Score=135.24 Aligned_cols=102 Identities=15% Similarity=0.151 Sum_probs=82.0
Q ss_pred CCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 602 DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.|.+|...|.+|+|+|++ .+|||||.|++|+|||+.+. .++..+. |...|.+|+|+|+ +++|||++.||
T Consensus 120 ~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg--------~~~~~l~~h~~~V~sla~spd-G~lLatgs~Dg 190 (493)
T PTZ00421 120 HLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG--------KAVEVIKCHSDQITSLEWNLD-GSLLCTTSKDK 190 (493)
T ss_pred EecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC--------eEEEEEcCCCCceEEEEEECC-CCEEEEecCCC
Confidence 356789999999999986 69999999999999999865 2344443 4667999999995 57999999999
Q ss_pred cEEEEECCCCcEEEEE--------EEEeecCCceEEEecCc
Q 004989 680 VVQVGQVLHLIYFSAL--------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~v--------~~v~~~~~~~~~~~~~~ 712 (720)
+|+|||+++++.+.++ .++.|.+....+.+..|
T Consensus 191 ~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~ 231 (493)
T PTZ00421 191 KLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGC 231 (493)
T ss_pred EEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEec
Confidence 9999999999988762 35677777666665444
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.2e-11 Score=127.55 Aligned_cols=102 Identities=10% Similarity=0.028 Sum_probs=78.8
Q ss_pred hchhhhhhcccCCCCCc--eecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnI--V~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
|..+|..++.++.|++| +..++.........+..+++||+ .| .+|.+++... .+++. .+.||+.+|.+||
T Consensus 86 r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH 159 (239)
T PRK01723 86 RAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFH 159 (239)
T ss_pred HHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHH
Confidence 45578889999999886 56666323222222234699999 65 7999988542 35554 3678999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
++||+||||||.|||++.++.++|+|||.+..
T Consensus 160 ~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 160 DAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 99999999999999999989999999998855
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.9e-11 Score=120.49 Aligned_cols=119 Identities=14% Similarity=0.159 Sum_probs=98.7
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cC
Q 004989 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-AS 655 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~ 655 (720)
.-.+..|.+|..-+.+.+..+ .||++-|.+++++| ++..|+|||.|++.+|||++.+ ..++.+ +|
T Consensus 162 ~SGD~TCalWDie~g~~~~~f-----~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~--------~c~qtF~gh 228 (343)
T KOG0286|consen 162 GSGDMTCALWDIETGQQTQVF-----HGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG--------QCVQTFEGH 228 (343)
T ss_pred cCCCceEEEEEcccceEEEEe-----cCCcccEEEEecCCCCCCeEEecccccceeeeeccCc--------ceeEeeccc
Confidence 344556777777666555554 57799999999999 9999999999999999998876 345554 45
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
.+.|+.|+|-|. +.-+||||.|+|+|++|++..+.+.. |++|+||..+-+.-.|
T Consensus 229 esDINsv~ffP~-G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfag 291 (343)
T KOG0286|consen 229 ESDINSVRFFPS-GDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAG 291 (343)
T ss_pred ccccceEEEccC-CCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEee
Confidence 788999999995 56899999999999999999998876 8999999888776655
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-11 Score=137.29 Aligned_cols=218 Identities=17% Similarity=0.131 Sum_probs=158.6
Q ss_pred chhhchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHH----HH
Q 004989 60 FELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVE----IV 134 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~----aL 134 (720)
..+|+.+|+.-...++ |+|.++.+..+. ... +.|+-+|++|.+|.++......-++...++.++.+... ||
T Consensus 160 ~~~~k~~~~~s~~~i~~~~~~v~~~~~~e-~~~---~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al 235 (524)
T KOG0601|consen 160 DSKRKLREFLSHHKIDSHENPVRDSPAWE-GSG---ILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTAL 235 (524)
T ss_pred ccccccchhhcccccCccccccccCcccc-cCC---cceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccc
Confidence 4456667765555543 999999888333 332 57999999999999998776666899999999999999 99
Q ss_pred HHHHHCCceeccCCCCcEEEccC-CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 135 YAAHSQGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
.++|+.+++|-|+||+||++..+ ...++.|||....++... | +
T Consensus 236 ~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~----------------------------------~--~ 279 (524)
T KOG0601|consen 236 SHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGN----------------------------------F--S 279 (524)
T ss_pred cccCCCcccccccchhheecccccceeecCCcceeEEccCCc----------------------------------c--c
Confidence 99999999999999999999988 778888887765443321 1 1
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.... ......|...|++||.+.+. ++++.|
T Consensus 280 ~~~~-------------------------------------------------~~~r~~~~~~Y~~ke~~~~l-~~~~~d 309 (524)
T KOG0601|consen 280 SVFK-------------------------------------------------VSKRPEGDCIYAAKELLNGL-ATFASD 309 (524)
T ss_pred ccee-------------------------------------------------eeecCCCCceEeChhhhccc-cchHhh
Confidence 0000 00012467789999999777 899999
Q ss_pred chhhhchhhhccccCCCC-chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 294 IYRLGVLLFELFCPFSTG-EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 294 IwSLGvll~eLltpf~~~-~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||+||.++.+..+.+... ......+..+++..+|..+.... ......+..|+..+|-.|+++..+++|+++...
T Consensus 310 i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 310 IFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred hcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 999999999877732211 11112234455555666554332 333368889999999999999999999999854
|
|
| >KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.9e-11 Score=126.96 Aligned_cols=112 Identities=14% Similarity=0.179 Sum_probs=95.4
Q ss_pred CCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCC-CEEEEEEecCCCCEEEEEeCCC
Q 004989 602 DLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS-KLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~i~~l~w~~~~~~~laS~s~D~ 679 (720)
-+-||+..|..++|+|-++ .|||||.|-+|+||++-... ...+...|++++.++. +|--|.|.|--.|.|+|+++|.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~-l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENG-LTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcc-cccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 3568999999999999665 69999999999999975321 1123335898887644 5999999999999999999999
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004989 680 VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|.|||+.||+.+-+ ||+++||..++.+.+..=|+
T Consensus 155 ~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDK 195 (472)
T KOG0303|consen 155 TVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDK 195 (472)
T ss_pred eEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccc
Confidence 999999999998876 99999999999999998776
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=7e-11 Score=118.64 Aligned_cols=108 Identities=7% Similarity=0.016 Sum_probs=93.2
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
..|.+|++.++|+.|-+| ..|+|||-|.|+-+||+.++. .+..+ +|.+.|.+|+++|.+.+.++||+.|+
T Consensus 139 r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~--------~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~ 209 (343)
T KOG0286|consen 139 RELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQ--------QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDK 209 (343)
T ss_pred eeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccce--------EEEEecCCcccEEEEecCCCCCCeEEeccccc
Confidence 346778999999999884 467788999999999998872 33333 45778999999997788999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.+|||++.|.|.++ |++|.|.|.+-.+++||=|..-.
T Consensus 210 ~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcR 254 (343)
T KOG0286|consen 210 SAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCR 254 (343)
T ss_pred ceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeE
Confidence 999999999999998 89999999999999999876543
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-11 Score=137.06 Aligned_cols=104 Identities=9% Similarity=0.143 Sum_probs=92.7
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.+.||+.-|..|+|+.++ +|+|+|+|||||+|++... .++..+.|.+-|+||+|+|.+.++++|||-||.|
T Consensus 364 ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~--------~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~Kv 434 (712)
T KOG0283|consen 364 EFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRK--------ECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKV 434 (712)
T ss_pred hhhccchhheecccccCC-eeEeccccccEEeecCCCc--------ceeeEEecCCeeEEEEecccCCCcEeecccccce
Confidence 456779999999999854 8899999999999998755 5677888999999999999999999999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004989 682 QVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|||++...+.+.. |++|.|.|.|.+.+=|+|+=
T Consensus 435 RiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G 473 (712)
T KOG0283|consen 435 RLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNG 473 (712)
T ss_pred EEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEecc
Confidence 9999988877664 89999999999999999874
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=3e-12 Score=129.38 Aligned_cols=125 Identities=17% Similarity=0.237 Sum_probs=107.2
Q ss_pred hhhhhhccccceEEeeeecc---CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cC
Q 004989 581 EGLCKYLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--AS 655 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~---~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~ 655 (720)
+++...|.|.+.|+..+|++ ..|..+...|.|+.|++|.+++|||+.||+||||-+.++. ++..+ .|
T Consensus 234 DGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~--------ClRrFdrAH 305 (508)
T KOG0275|consen 234 DGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ--------CLRRFDRAH 305 (508)
T ss_pred cceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecch--------HHHHhhhhh
Confidence 44667899999999999993 4588899999999999999999999999999999998871 23222 23
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
...|+||.||.++ +.|.|+|+|.||||--+.+|+++++ |+-+.|++.+..+.+.|-|-
T Consensus 306 tkGvt~l~FSrD~-SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg 370 (508)
T KOG0275|consen 306 TKGVTCLSFSRDN-SQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG 370 (508)
T ss_pred ccCeeEEEEccCc-chhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc
Confidence 5569999999965 5899999999999999999999987 78899999999999988764
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.5e-11 Score=144.94 Aligned_cols=123 Identities=18% Similarity=0.249 Sum_probs=100.5
Q ss_pred EEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-------cCCceEEeecCc
Q 004989 96 FVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-------SFNHVSFIESAS 167 (720)
Q Consensus 96 ~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-------~~~~vkliDfg~ 167 (720)
-++|+|| .-|||.++++ ..+.+++..++.+..|++..|++||..+|||+||||+|+||. .+--++|||||.
T Consensus 769 S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred ceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 4899999 9999999995 555699999999999999999999999999999999999996 233589999998
Q ss_pred ccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccc
Q 004989 168 CSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI 247 (720)
Q Consensus 168 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~ 247 (720)
+.|.-.- . .
T Consensus 848 siDm~lf---------------------------------------p--~------------------------------ 856 (974)
T KOG1166|consen 848 SIDMKLF---------------------------------------P--D------------------------------ 856 (974)
T ss_pred ceeeeEc---------------------------------------C--C------------------------------
Confidence 7442100 0 0
Q ss_pred cccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhcccc
Q 004989 248 LDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 248 ~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
..+-...++|-.+-.+|+..|.++++.+|.|.|..+++-||.+
T Consensus 857 -----------------~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG 899 (974)
T KOG1166|consen 857 -----------------GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG 899 (974)
T ss_pred -----------------CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence 0000114678889999999999999999999999999999974
|
|
| >KOG0302 consensus Ribosome Assembly protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.6e-11 Score=122.89 Aligned_cols=108 Identities=16% Similarity=0.207 Sum_probs=83.5
Q ss_pred CCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.-|.+|+.-|-.++|||..+ .|||||.|++|||||++..... ..+..-.|.+.|+-|+||.... +||||+.||
T Consensus 251 ~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~-----~~~~~kAh~sDVNVISWnr~~~-lLasG~DdG 324 (440)
T KOG0302|consen 251 RPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK-----AAVSTKAHNSDVNVISWNRREP-LLASGGDDG 324 (440)
T ss_pred ccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc-----ceeEeeccCCceeeEEccCCcc-eeeecCCCc
Confidence 34778999999999999775 7999999999999999876221 1222345577899999998655 999999999
Q ss_pred cEEEEECC---CCcEEEE-------EEEEeecCC--ceEEEecCccc
Q 004989 680 VVQVGQVL---HLIYFSA-------LYCIVLNKL--LIIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWD~~---tg~~~~~-------v~~v~~~~~--~~~~~~~~~~~ 714 (720)
+++|||++ .|+.+.+ |+||.|+|. ..+-++|.=++
T Consensus 325 t~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~Q 371 (440)
T KOG0302|consen 325 TLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQ 371 (440)
T ss_pred eEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCc
Confidence 99999997 4555655 899999863 44445554333
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.2e-11 Score=119.37 Aligned_cols=109 Identities=13% Similarity=0.181 Sum_probs=89.2
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+++.+|...|.||+|+-||..+|+|+.|++++||++.... - ......-.|++.|-.+||+|.+...+|+++.|++
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r-~----~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ 88 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR-F----RKELVYRGHTDSVDQLCWDPKHPDLFATASGDKT 88 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchh-h----hhhhcccCCCcchhhheeCCCCCcceEEecCCce
Confidence 5677889999999999999999999999999999976541 0 0111223456789999999999999999999999
Q ss_pred EEEEECCCCcEEEEE------EEEeecCCceEEEecCccc
Q 004989 681 VQVGQVLHLIYFSAL------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 681 v~lWD~~tg~~~~~v------~~v~~~~~~~~~~~~~~~~ 714 (720)
|++||+++++|+.++ .=+.|+|.+.++.-|.=|.
T Consensus 89 ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD 128 (313)
T KOG1407|consen 89 IRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDD 128 (313)
T ss_pred EEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcc
Confidence 999999999999873 2468999998887776543
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.5e-12 Score=128.24 Aligned_cols=207 Identities=18% Similarity=0.154 Sum_probs=139.5
Q ss_pred cccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHC--Cce
Q 004989 71 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ--GIV 143 (720)
Q Consensus 71 L~~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~--gIv 143 (720)
|-++.|.|||+++..|-.... +...+.++.|| ..|+|.++|+ +.+..+......+|+.||+.||.|||+. -|+
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii 200 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII 200 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence 556889999999984432222 34457889999 8999999993 3445588889999999999999999984 699
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+++...-|++..+|-+|+- .. .+ |+- .
T Consensus 201 hgnlTc~tifiq~ngLIkig---~~----ap----------------------------------~s~--h--------- 228 (458)
T KOG1266|consen 201 HGNLTCDTIFIQHNGLIKIG---SV----AP----------------------------------DST--H--------- 228 (458)
T ss_pred cCCcchhheeecCCceEEec---cc----Cc----------------------------------ccc--c---------
Confidence 99999999999999988872 11 00 000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+ +. .+ .....+-++|.|||.-.....+.++|||++|....|
T Consensus 229 ----------------------~s~~~~---~~-~E--------k~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 229 ----------------------PSVNST---RE-AE--------KSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred ----------------------hhhhhh---hH-hh--------hhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 000000 00 00 001235678999998666667889999999988888
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|.. |-.+.... ..-..+. .-.+....+..++++.+||..+|..||+|+++|.||.+-+..
T Consensus 275 mailEiq~tnseS~~-~~ee~ia----~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 275 MAILEIQSTNSESKV-EVEENIA----NVIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVH 338 (458)
T ss_pred HHHheeccCCCccee-ehhhhhh----hheeeccCccccCcCcccccCCCCCCcchhhhhcCceeeecc
Confidence 875 22221110 1111111 111222334445899999999999999999999999877653
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.21 E-value=7e-11 Score=115.33 Aligned_cols=125 Identities=12% Similarity=0.167 Sum_probs=106.4
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~ 658 (720)
.+.-+.+|.-++.||+..++ +|...|+.|+|+-+...+++||.|.++|+||+++... .|++.+.. ...
T Consensus 79 gDk~v~vwDV~TGkv~Rr~r-----gH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~------ePiQildea~D~ 147 (307)
T KOG0316|consen 79 GDKAVQVWDVNTGKVDRRFR-----GHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSF------EPIQILDEAKDG 147 (307)
T ss_pred CCceEEEEEcccCeeeeecc-----cccceeeEEEecCcceEEEeccccceeEEEEcccCCC------CccchhhhhcCc
Confidence 34467889999999988776 3589999999999999999999999999999987532 47776654 778
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----EEEEeecCCceEEEecCccceEEc
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-----v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|++|..+. +.|++||.||+||.+|++.|+.... |+||.|++.+++..-|++|-...|
T Consensus 148 V~Si~v~~---heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrL 209 (307)
T KOG0316|consen 148 VSSIDVAE---HEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRL 209 (307)
T ss_pred eeEEEecc---cEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeee
Confidence 99999985 4799999999999999999988765 999999999999999998865443
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.6e-11 Score=124.56 Aligned_cols=105 Identities=15% Similarity=0.157 Sum_probs=88.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccce--EEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV--VEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
|..|++.|.=+.||++|+|||||+.|.+.-||+...- .|..+ +..+|...|+-+.|||++ .+|.+|+.|..
T Consensus 220 l~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d------~~~kl~~tlvgh~~~V~yi~wSPDd-ryLlaCg~~e~ 292 (519)
T KOG0293|consen 220 LQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYD------VHFKLKKTLVGHSQPVSYIMWSPDD-RYLLACGFDEV 292 (519)
T ss_pred HhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecC------cceeeeeeeecccCceEEEEECCCC-CeEEecCchHh
Confidence 4567999999999999999999999999999996432 22112 234567789999999976 58999999999
Q ss_pred EEEEECCCCcEEEE--------EEEEeecCCceEEEecCccc
Q 004989 681 VQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 681 v~lWD~~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+++|||.||.+... +.|++|.|++--++.||-|-
T Consensus 293 ~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr 334 (519)
T KOG0293|consen 293 LSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDR 334 (519)
T ss_pred eeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCC
Confidence 99999999988764 78999999999999999874
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-10 Score=121.02 Aligned_cols=112 Identities=20% Similarity=0.290 Sum_probs=93.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc-----------------ccccccceEEec-CCCCEEEEEEec
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE-----------------NRDIHYPVVEMA-SRSKLSSICWNS 666 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~-----------------~~~~~~~~~~~~-~~~~i~~l~w~~ 666 (720)
||...|-||+-++||..|+|||.|.+|+||+..+-... ......|+..+. |+.+|++|.|++
T Consensus 191 GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d 270 (423)
T KOG0313|consen 191 GHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD 270 (423)
T ss_pred ccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC
Confidence 89999999999999999999999999999994331000 012345777665 488899999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccceEEc
Q 004989 667 YIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
...+.|+|+|-|||+||+.||+++.+ ++||++++.+..+++|+-|.-..|
T Consensus 271 --~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl 326 (423)
T KOG0313|consen 271 --ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRL 326 (423)
T ss_pred --CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceee
Confidence 45899999999999999999999887 899999999999999998875443
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.8e-11 Score=121.01 Aligned_cols=128 Identities=9% Similarity=0.062 Sum_probs=102.7
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC
Q 004989 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
++.|.+...+-|...++--+-++. +|..||..|+-+.||.+||+||.|.++++|=+.+.. |....-.|
T Consensus 209 lS~srD~tik~We~~tg~cv~t~~-----~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~-------~k~~lR~h 276 (406)
T KOG0295|consen 209 LSCSRDNTIKAWECDTGYCVKTFP-----GHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQ-------CKAELREH 276 (406)
T ss_pred eecccccceeEEecccceeEEecc-----CchHhEEEEEecCCeeEEEecCCCceEEEEEeccch-------hhhhhhcc
Confidence 677777777888887777666665 458899999999999999999999999999887751 11111123
Q ss_pred CCCEEEEEEecCC--------------CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 656 RSKLSSICWNSYI--------------KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 656 ~~~i~~l~w~~~~--------------~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
...|-|++|-|.. +++|+|+|.|+|||+||+.||.|+.+ |..++|+|.|.++.|-+=|+
T Consensus 277 Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDk 356 (406)
T KOG0295|consen 277 EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDK 356 (406)
T ss_pred ccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCC
Confidence 4568888886642 25899999999999999999999998 88999999999999877665
Q ss_pred e
Q 004989 715 V 715 (720)
Q Consensus 715 ~ 715 (720)
-
T Consensus 357 t 357 (406)
T KOG0295|consen 357 T 357 (406)
T ss_pred c
Confidence 3
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.2e-11 Score=138.05 Aligned_cols=232 Identities=17% Similarity=0.188 Sum_probs=156.8
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++-...||-+++.+. ........+++++| .|++|...|.+.+ ..+..-++.++..++.+++|||+..++|+|++
T Consensus 857 ~~i~p~~P~v~~~~~----s~~~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~ 931 (1205)
T KOG0606|consen 857 ILITPRSPAVVRSFP----SFPCRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLK 931 (1205)
T ss_pred ccccCCCCceecccC----CCCCCCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhccccc
Confidence 333345677777666 23334467999999 8999999886655 37788888899999999999999999999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc-ccccCCCCCCccccccc
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL-QLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df-gla~~~~~~~~~~~~~q 227 (720)
|.|+++..+++.++.+||+....|.-... .+. |..+.....+
T Consensus 932 p~~~l~~~~gh~~l~~~~t~~~vg~~~p~------------------------------~~~sg~~~~~~~~~------- 974 (1205)
T KOG0606|consen 932 PDSLLIAYDGHRPLTDFGTLSKVGLIPPT------------------------------TDLSGPSSSGTPRR------- 974 (1205)
T ss_pred ccchhhcccCCcccCccccccccccccCc------------------------------CCcccccccCcccc-------
Confidence 99999999999999999976543322110 011 0000000000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
+. .......+ ... -.......+||+.|.+||.+.+...+..+|+|++|++++|.++
T Consensus 975 ----~~------~~~~~~~l------------~~~-~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen 975 ----LS------RSERRPQL------------SAD-EARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred ----cc------cccccccc------------ccc-hhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC
Confidence 00 00000000 000 0001123589999999999999999999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCC-ccccccC-chHHHHHHHcCCCCCCCCCChH---HHHcCcccCCC
Q 004989 307 --PFSTGEEKTRTMSSLRHRVLP-PQLLLKF-PKEASFCLWLLHPEPSGRPKMG---ELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p-~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~---eiL~hp~~~~~ 367 (720)
||.... .......+..+..| +.-.... +...+++..+|..+|.+|..+. ++-.|+||+..
T Consensus 1032 ~pp~na~t-pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1032 IPPFNAET-PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred CCCCCCcc-hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence 444433 34555555554433 3322333 3344999999999999998766 88899999987
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.5e-11 Score=120.39 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=80.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..+.|++|+.... ++.+.. ..+++||| .|++|.+++.... . +...++.+|+.+|.++|+.|
T Consensus 45 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 45 RTRREARIMSRARKAGVNVPAV-YFVDPE---NFIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAG 115 (211)
T ss_pred HHHHHHHHHHHHHHCCCCCCeE-EEEeCC---CCEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCC
Confidence 4457888899999999866555 332322 35899999 8999999985422 2 88899999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
++|+|++|.|||++ ++.++++|||.+..
T Consensus 116 i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 116 IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999998 78999999998843
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.5e-10 Score=113.74 Aligned_cols=108 Identities=13% Similarity=0.229 Sum_probs=85.6
Q ss_pred CCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 602 DLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
.+.+|.+.|.++||+|- |.+|||||.||+||||+.... .. . ...+.+ .|+-.|.+|+|+|+ +++|||||+|
T Consensus 9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~-~s---~-~ck~vld~~hkrsVRsvAwsp~-g~~La~aSFD 82 (312)
T KOG0645|consen 9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSG-DS---W-TCKTVLDDGHKRSVRSVAWSPH-GRYLASASFD 82 (312)
T ss_pred eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCC-Cc---E-EEEEeccccchheeeeeeecCC-CcEEEEeecc
Confidence 45678999999999998 999999999999999997642 11 0 111111 34667999999995 5699999999
Q ss_pred CcEEEEECCCC--cEEEE-------EEEEeecCCceEEEecCccce
Q 004989 679 GVVQVGQVLHL--IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWD~~tg--~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.|+-||-=..+ +|+.+ |-||+||+.+.++++-|=|+-
T Consensus 83 ~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKS 128 (312)
T KOG0645|consen 83 ATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKS 128 (312)
T ss_pred ceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCe
Confidence 99999976644 45554 899999999999998887764
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=115.01 Aligned_cols=118 Identities=10% Similarity=0.154 Sum_probs=91.7
Q ss_pred cceEEeeeec-c--CCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEe
Q 004989 590 SKLRVKADLN-Q--GDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~-~--~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~ 665 (720)
.++|+++..+ . ..+.||.+.|...+|+| .+.+||++|.|++++|||++... .++....|...|.|+-||
T Consensus 127 ~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g-------k~~~i~ah~~Eil~cdw~ 199 (311)
T KOG0277|consen 127 GTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPG-------KFMSIEAHNSEILCCDWS 199 (311)
T ss_pred CceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCC-------ceeEEEeccceeEeeccc
Confidence 3556666555 2 35778999999999998 66899999999999999987641 233333456689999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecCC-ceEEEecCccc
Q 004989 666 SYIKSQIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNKL-LIIFRYGMFQE 714 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg-~~~~~-------v~~v~~~~~-~~~~~~~~~~~ 714 (720)
+++.++||||+-|+.||.||++.- +.+.+ |..|.|||- .+++++.|+|=
T Consensus 200 ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDm 257 (311)
T KOG0277|consen 200 KYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDM 257 (311)
T ss_pred ccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccc
Confidence 999999999999999999999743 33443 788999875 45667777763
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.1e-10 Score=129.70 Aligned_cols=100 Identities=6% Similarity=0.066 Sum_probs=85.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.|.--|+||+.+|+.++|||||.||+.|||++.... -+..+ +|+-.|.||.|+|++ +.|||+|.|+||||
T Consensus 461 aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~--------l~~vLsGH~RGvw~V~Fs~~d-q~laT~SgD~TvKI 531 (775)
T KOG0319|consen 461 AHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLR--------LLGVLSGHTRGVWCVSFSKND-QLLATCSGDKTVKI 531 (775)
T ss_pred hhcccccceEecCCCceEEecccccceeeecccCce--------EEEEeeCCccceEEEEecccc-ceeEeccCCceEEE
Confidence 457889999999999999999999999999987541 22233 446679999999976 59999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 684 WD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+.+..|+++ |..+.|-..+..+.|+--|
T Consensus 532 W~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~ad 568 (775)
T KOG0319|consen 532 WSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGAD 568 (775)
T ss_pred EEeccceeeeeecCccceeEeeeeeeCCcEEEeccCC
Confidence 99999999998 7888998888888876554
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.6e-11 Score=119.54 Aligned_cols=109 Identities=10% Similarity=0.148 Sum_probs=88.8
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+..|+..+.|+.|+... .++||||+|+.||+||++... .|+.++.+ .-.|..|.|||++.++|||+|||.|
T Consensus 186 i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-------~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT 258 (311)
T KOG0277|consen 186 IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR-------TPLFELNGHGLAVRKVKFSPHHASLLASASYDMT 258 (311)
T ss_pred EEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc-------ccceeecCCceEEEEEecCcchhhHhhhccccce
Confidence 45678899999999866 479999999999999998762 47777755 4569999999999999999999999
Q ss_pred EEEEECCCCcEEEE--------EEEEeecCC-ceEEEecCccceEEc
Q 004989 681 VQVGQVLHLIYFSA--------LYCIVLNKL-LIIFRYGMFQEVKYL 718 (720)
Q Consensus 681 v~lWD~~tg~~~~~--------v~~v~~~~~-~~~~~~~~~~~~~~~ 718 (720)
+||||...+....+ |..++||.. ...+++-..||..|.
T Consensus 259 ~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~V 305 (311)
T KOG0277|consen 259 VRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYV 305 (311)
T ss_pred EEecccccchhhhhhhhccceEEeccccccccCceeeecccccceee
Confidence 99999986654433 667788765 456788888887764
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.17 E-value=5e-11 Score=134.01 Aligned_cols=128 Identities=11% Similarity=0.146 Sum_probs=103.6
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC
Q 004989 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
|..--++.+++|.|.-- +|- ..|..|.+.|..|+|+|++.+|+|||.|.+||||++.+.. |-.+..+|
T Consensus 25 LtslHsG~IQlWDYRM~----tli-~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr-------clftL~GH 92 (1202)
T KOG0292|consen 25 LTSLHSGVIQLWDYRMG----TLI-DRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR-------CLFTLLGH 92 (1202)
T ss_pred EEeecCceeeeehhhhh----hHH-hhhhccCCccceeeecCCCCeEEecCCccEEEEEecccce-------ehhhhccc
Confidence 33344557788888322 221 2466789999999999999999999999999999998751 22234455
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
-+-|..+.|.+ -..+|.|+|.|.|||||+-.+++||.. |-|..|+|.--.++|+|+|+-.
T Consensus 93 lDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTV 159 (1202)
T KOG0292|consen 93 LDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTV 159 (1202)
T ss_pred cceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceE
Confidence 66799999987 456999999999999999999999987 7899999999999999999854
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-10 Score=122.89 Aligned_cols=121 Identities=17% Similarity=0.215 Sum_probs=101.5
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 658 (720)
.+...+||.-++.-|.++| .+|++.|.|.+|+|... +++|||-|++||+||.++.. .++.++.|..+
T Consensus 131 Dd~v~k~~d~s~a~v~~~l-----~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~-------~~v~elnhg~p 198 (487)
T KOG0310|consen 131 DDKVVKYWDLSTAYVQAEL-----SGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT-------SRVVELNHGCP 198 (487)
T ss_pred CCceEEEEEcCCcEEEEEe-----cCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC-------ceeEEecCCCc
Confidence 3457788888888876555 56699999999999765 89999999999999987652 46788899999
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE--------EEEEEEeecCCceEEEecCccc
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF--------SALYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~--------~~v~~v~~~~~~~~~~~~~~~~ 714 (720)
|..|++=| .+++||||+ ...|||||+.+|..+ ++|+|..++..+....+|++|-
T Consensus 199 Ve~vl~lp-sgs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~ 260 (487)
T KOG0310|consen 199 VESVLALP-SGSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDR 260 (487)
T ss_pred eeeEEEcC-CCCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeeccccc
Confidence 99999998 457999998 579999999976443 2499999999999999999984
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.2e-10 Score=123.11 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=79.1
Q ss_pred hhhhccccceEEeeee----c-cCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004989 583 LCKYLSFSKLRVKADL----N-QGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l----~-~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
++.....++|.++.+- + ......|++.|+||+|+|-++ +|||||.|++|++||+++... ++.....|.
T Consensus 243 F~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~------~lh~~e~H~ 316 (422)
T KOG0264|consen 243 FGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK------PLHTFEGHE 316 (422)
T ss_pred heeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc------CceeccCCC
Confidence 3445555666555544 1 345678899999999999776 699999999999999998741 233444567
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~t 688 (720)
..|.+|.|||+..++|||++.|+.+.|||+..
T Consensus 317 dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 317 DEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred cceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 78999999999999999999999999999963
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=123.04 Aligned_cols=104 Identities=15% Similarity=0.236 Sum_probs=82.2
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc--------c-------------------------cccc
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE--------N-------------------------RDIH 647 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~--------~-------------------------~~~~ 647 (720)
..|..|.+.|.+|.|+.+|.||++||+|+++-|||..++... + .+..
T Consensus 270 ~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~ 349 (524)
T KOG0273|consen 270 STLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGED 349 (524)
T ss_pred hhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCC
Confidence 345678999999999999999999999999999997442100 0 1234
Q ss_pred cceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCce
Q 004989 648 YPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLI 705 (720)
Q Consensus 648 ~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~ 705 (720)
.|+..+ .|+++|++|.|+|. +.+|||||+|+|+|||....+.++.. +|.+.|+|.+.
T Consensus 350 ~P~~t~~GH~g~V~alk~n~t-g~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~ 414 (524)
T KOG0273|consen 350 RPVKTFIGHHGEVNALKWNPT-GSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGP 414 (524)
T ss_pred CcceeeecccCceEEEEECCC-CceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCC
Confidence 577555 45889999999995 56999999999999999876666543 88899988764
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.5e-11 Score=122.96 Aligned_cols=103 Identities=13% Similarity=0.048 Sum_probs=78.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG- 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g- 141 (720)
.++|..++.++.+. ++.+.. ++... ..++|||| .|.+|..++... ..+...++..++.||+.+|.+||++|
T Consensus 97 ~~~E~~~L~~L~~~-~i~~p~-~~~~~----~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~g~ 169 (237)
T smart00090 97 AEKEFRNLQRLYEA-GVPVPK-PIAWR----RNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKEGE 169 (237)
T ss_pred HHHHHHHHHHHHhc-CCCCCe-eeEec----CceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhcCC
Confidence 34788888888753 333323 12122 23799999 777887655222 33677778899999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD 174 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~ 174 (720)
|+||||||+||+++ ++.++++|||.+...+.+
T Consensus 170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~ 201 (237)
T smart00090 170 LVHGDLSEYNILVH-DGKVVIIDVSQSVELDHP 201 (237)
T ss_pred EEeCCCChhhEEEE-CCCEEEEEChhhhccCCc
Confidence 99999999999998 889999999999765554
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.4e-11 Score=123.52 Aligned_cols=104 Identities=8% Similarity=0.016 Sum_probs=79.8
Q ss_pred hhhhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004989 581 EGLCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+.++++...++++++.... ...|.||.--|.||+|+|.--+|||||.|..||+||.+++. |-.....|+.
T Consensus 193 skF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~-------cl~tlh~HKn 265 (464)
T KOG0284|consen 193 SKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGS-------CLATLHGHKN 265 (464)
T ss_pred ceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcc-------hhhhhhhccc
Confidence 4467788888999999887 36789999999999999999999999999999999998862 1112223456
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF 692 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~ 692 (720)
.|..+.|+|++ ++|+|+|.|.+++|.|+++-+.+
T Consensus 266 tVl~~~f~~n~-N~Llt~skD~~~kv~DiR~mkEl 299 (464)
T KOG0284|consen 266 TVLAVKFNPNG-NWLLTGSKDQSCKVFDIRTMKEL 299 (464)
T ss_pred eEEEEEEcCCC-CeeEEccCCceEEEEehhHhHHH
Confidence 67777777754 77777777777777777744433
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.6e-10 Score=121.58 Aligned_cols=106 Identities=11% Similarity=0.111 Sum_probs=87.4
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+..|+..|..+.|+|++ ++|++||.|+.+++||+++. +-..++. |++-|.|.+|+|-..++++||||||+
T Consensus 106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a--------~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~ 177 (487)
T KOG0310|consen 106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA--------YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK 177 (487)
T ss_pred HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc--------EEEEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence 55679999999999866 57999999999999999876 2233443 47779999999988889999999999
Q ss_pred EEEEECCCC-cEEEE------EEEEeecCCceEEEecCccceE
Q 004989 681 VQVGQVLHL-IYFSA------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg-~~~~~------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+||.++- ..+.+ |.+|-|=|.+..|++..=-+||
T Consensus 178 vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vk 220 (487)
T KOG0310|consen 178 VRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGGNSVK 220 (487)
T ss_pred EEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCCCeEE
Confidence 999999877 56665 7888998888888876655555
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.5e-11 Score=135.92 Aligned_cols=94 Identities=18% Similarity=0.225 Sum_probs=79.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
|..+|..++..+.|++|+..+. +..... ..+++||| .|++|.+++. ....++.||+.+|.+||+.|
T Consensus 382 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~g 448 (535)
T PRK09605 382 RTRAEARLLSEARRAGVPTPVI-YDVDPE---EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAG 448 (535)
T ss_pred HHHHHHHHHHhhcccCCCeeEE-EEEeCC---CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCC
Confidence 4458888999999999987655 232322 35899999 9999999884 45789999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
|+||||||+|||+ .++.++++|||+++.
T Consensus 449 iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 449 IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999999999 678999999999854
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.8e-10 Score=135.39 Aligned_cols=105 Identities=9% Similarity=0.080 Sum_probs=85.8
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+| +|.+|||||.|++|+|||+.+. .++..+.++..|.+++|++..+.+||+|+.||+|
T Consensus 571 ~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~--------~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I 642 (793)
T PLN00181 571 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG--------VSIGTIKTKANICCVQFPSESGRSLAFGSADHKV 642 (793)
T ss_pred ecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC--------cEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeE
Confidence 456789999999996 8899999999999999998765 2344444566799999987778899999999999
Q ss_pred EEEECCCCc-EEEE-------EEEEeecCCceEEEecCccceE
Q 004989 682 QVGQVLHLI-YFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWD~~tg~-~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++||+++++ .+.+ |+++.|. .+..+++++.|...
T Consensus 643 ~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~i 684 (793)
T PLN00181 643 YYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTL 684 (793)
T ss_pred EEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEE
Confidence 999998765 2332 8899997 56678888888643
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.5e-10 Score=111.41 Aligned_cols=85 Identities=7% Similarity=0.100 Sum_probs=70.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
+..|...+..|.||||++||||+|.|++++||+....+. ...+.-.|..++..++||.+ +.+|++|+.|+++|
T Consensus 211 ~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~k------le~~l~gh~rWvWdc~FS~d-g~YlvTassd~~~r 283 (311)
T KOG0315|consen 211 FQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFK------LELVLTGHQRWVWDCAFSAD-GEYLVTASSDHTAR 283 (311)
T ss_pred eecccceEEEEEECCCCcEEEeecCCceEEEEecCCcee------eEEEeecCCceEEeeeeccC-ccEEEecCCCCcee
Confidence 445588899999999999999999999999999876521 12333345678999999985 56999999999999
Q ss_pred EEECCCCcEEEE
Q 004989 683 VGQVLHLIYFSA 694 (720)
Q Consensus 683 lWD~~tg~~~~~ 694 (720)
+||+..|+.++.
T Consensus 284 lW~~~~~k~v~q 295 (311)
T KOG0315|consen 284 LWDLSAGKEVRQ 295 (311)
T ss_pred ecccccCceeee
Confidence 999999998876
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.5e-10 Score=126.81 Aligned_cols=130 Identities=10% Similarity=0.149 Sum_probs=96.7
Q ss_pred hhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc-------cc-------cc
Q 004989 583 LCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-------EN-------RD 645 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~-------~~-------~~ 645 (720)
+.+=....|.|++.+.. -..+..|++.|..+.|+.+|..+.++|.||+||.||+..-.+ .+ .|
T Consensus 365 iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD 444 (893)
T KOG0291|consen 365 IATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVD 444 (893)
T ss_pred EEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEc
Confidence 44455668888888887 257888999999999999999999999999999999754100 00 00
Q ss_pred -----------cccce-----------EEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-------EE
Q 004989 646 -----------IHYPV-----------VEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-------AL 695 (720)
Q Consensus 646 -----------~~~~~-----------~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~-------~v 695 (720)
-++.+ -.+ +|.++|++|+|+|. ++.|||+|+|+|||+||+-...... .+
T Consensus 445 ~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~-~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdv 523 (893)
T KOG0291|consen 445 PSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPD-GSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDV 523 (893)
T ss_pred CCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccc-cCeEEeccccceEEEEEeeccCceeeeEeeccce
Confidence 01111 112 45888999999995 6799999999999999996442222 28
Q ss_pred EEEeecCCceEEEecCcc
Q 004989 696 YCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 696 ~~v~~~~~~~~~~~~~~~ 713 (720)
..|+|.|.+.-+.-...|
T Consensus 524 l~vsfrPdG~elaVaTld 541 (893)
T KOG0291|consen 524 LAVSFRPDGKELAVATLD 541 (893)
T ss_pred eEEEEcCCCCeEEEEEec
Confidence 999999998877766655
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.2e-10 Score=116.23 Aligned_cols=95 Identities=14% Similarity=0.181 Sum_probs=74.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
|..+|..++..+.|+++..... ++.... ..+++||| .|++|.+++..... .++.||+.+|.+||+.|
T Consensus 43 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~g 110 (199)
T TIGR03724 43 RTRNEARLLSRARKAGVNTPVV-YDVDPD---NKTIVMEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKAG 110 (199)
T ss_pred HHHHHHHHHHHHHHCCCCCCEE-EEEECC---CCEEEEEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHCC
Confidence 4447888888888887543332 122222 35899999 89999998843221 78999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
++|+|++|.||+++ ++.++++|||.+..
T Consensus 111 i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 111 IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999999998 89999999998743
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.9e-10 Score=111.07 Aligned_cols=98 Identities=9% Similarity=0.140 Sum_probs=81.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.+.+|+.-|.+|.|.-||+...|||.||++||||++.. .....+.+.+.|++|+.+|+.. .|.||+.+|-|
T Consensus 78 t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~--------~~qR~~~~~spVn~vvlhpnQt-eLis~dqsg~i 148 (311)
T KOG0315|consen 78 TFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL--------SCQRNYQHNSPVNTVVLHPNQT-ELISGDQSGNI 148 (311)
T ss_pred EEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCc--------ccchhccCCCCcceEEecCCcc-eEEeecCCCcE
Confidence 45778889999999999999999999999999999875 1234556678999999999654 89999999999
Q ss_pred EEEECCCCcEEEE--------EEEEeecCCceEEE
Q 004989 682 QVGQVLHLIYFSA--------LYCIVLNKLLIIFR 708 (720)
Q Consensus 682 ~lWD~~tg~~~~~--------v~~v~~~~~~~~~~ 708 (720)
+|||+.+..|..+ |.+++..+.+++..
T Consensus 149 rvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~ 183 (311)
T KOG0315|consen 149 RVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLA 183 (311)
T ss_pred EEEEccCCccccccCCCCCcceeeEEEcCCCcEEE
Confidence 9999998876654 67777766666554
|
|
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=9.2e-11 Score=115.35 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=77.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.|.+||.+|+|+.|.++|+|||.+|-+||||++... .|..++.+ .+.|..+-|-.-+ +.|.|+++|++||+
T Consensus 98 ~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~-------App~E~~ghtg~Ir~v~wc~eD-~~iLSSadd~tVRL 169 (334)
T KOG0278|consen 98 EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK-------APPKEISGHTGGIRTVLWCHED-KCILSSADDKTVRL 169 (334)
T ss_pred hhhheeeeEEecccchhhhccchHHHhhhhhccCCC-------CCchhhcCCCCcceeEEEeccC-ceEEeeccCCceEE
Confidence 458999999999999999999999999999987763 34445544 7789999998644 57888899999999
Q ss_pred EECCCCcEEEE------EEEEeecCCceEE
Q 004989 684 GQVLHLIYFSA------LYCIVLNKLLIIF 707 (720)
Q Consensus 684 WD~~tg~~~~~------v~~v~~~~~~~~~ 707 (720)
||.+||+.+++ |.+.-.++.+-++
T Consensus 170 WD~rTgt~v~sL~~~s~VtSlEvs~dG~il 199 (334)
T KOG0278|consen 170 WDHRTGTEVQSLEFNSPVTSLEVSQDGRIL 199 (334)
T ss_pred EEeccCcEEEEEecCCCCcceeeccCCCEE
Confidence 99999999987 5666666655443
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.5e-10 Score=130.78 Aligned_cols=111 Identities=14% Similarity=0.177 Sum_probs=89.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcc-----ccc-----ccccccceE-EecCCCCEEEEEEecCCCCEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI-----INE-----NRDIHYPVV-EMASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~-----~~~-----~~~~~~~~~-~~~~~~~i~~l~w~~~~~~~l 672 (720)
..|.+-|+||.|+|||+|||+||.|+-|.||+.... .+. .++-...+. ...|.+.|..|+|+|+ ..+|
T Consensus 66 ~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~-~~~l 144 (942)
T KOG0973|consen 66 DDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD-DSLL 144 (942)
T ss_pred ccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC-ccEE
Confidence 345899999999999999999999999999998731 111 011111222 3356788999999995 5699
Q ss_pred EEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 673 ASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 673 aS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+|.|++|-|||..|.+++.. |=.|.|.|.+.++++-+.|.-
T Consensus 145 vS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrt 194 (942)
T KOG0973|consen 145 VSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRT 194 (942)
T ss_pred EEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCce
Confidence 9999999999999999988776 678999999999999999863
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.6e-10 Score=111.28 Aligned_cols=112 Identities=13% Similarity=0.256 Sum_probs=91.7
Q ss_pred hhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEE
Q 004989 584 CKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSS 661 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~ 661 (720)
.....|-.||++.+++ | ..--.||+|+|+|+|||+||.|--+-+||+...+ ++..+.- .-+|..
T Consensus 171 v~ILsypsLkpv~si~AH------~snCicI~f~p~GryfA~GsADAlvSLWD~~ELi--------C~R~isRldwpVRT 236 (313)
T KOG1407|consen 171 VEILSYPSLKPVQSIKAH------PSNCICIEFDPDGRYFATGSADALVSLWDVDELI--------CERCISRLDWPVRT 236 (313)
T ss_pred EEEEeccccccccccccC------CcceEEEEECCCCceEeeccccceeeccChhHhh--------hheeeccccCceEE
Confidence 4556778899999987 5 6667789999999999999999999999987652 2222222 446999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEec
Q 004989 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 662 l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~ 710 (720)
|+||- ++.+|||||.|-.|-|=+|.||..+-+ .++|+|+|.-.+++|.
T Consensus 237 lSFS~-dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA 290 (313)
T KOG1407|consen 237 LSFSH-DGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYA 290 (313)
T ss_pred EEecc-CcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEE
Confidence 99996 567999999999999999999988877 5889999988887764
|
|
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3e-10 Score=114.73 Aligned_cols=111 Identities=10% Similarity=0.116 Sum_probs=92.5
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.|..|...|++++|+|...+|++|+.|++||+||+..... ......+.....|.|++|.| .+.+|+.|-.--++
T Consensus 167 TlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~sa-----KrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~ 240 (430)
T KOG0640|consen 167 TLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSA-----KRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTL 240 (430)
T ss_pred ehhhccCcccceeecchhheEEeccCCCeEEEEecccHHH-----HHHHHHhhccceeeeEeecC-CCceEEEecCCCce
Confidence 4566799999999999999999999999999999976411 11222233356799999999 66799988888999
Q ss_pred EEEECCCCcEEEE----------EEEEeecCCceEEEecCccceEEc
Q 004989 682 QVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 682 ~lWD~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
+|+||+|-||... |+||.||+.++++++||.|-...|
T Consensus 241 rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Ikl 287 (430)
T KOG0640|consen 241 RLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKL 287 (430)
T ss_pred eEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEe
Confidence 9999999999875 999999999999999999876543
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.2e-10 Score=120.02 Aligned_cols=107 Identities=10% Similarity=0.189 Sum_probs=83.1
Q ss_pred CCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 601 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
..+.+|...|..|+|++-. .+|+++|.|+++.|||.++. .. .|. ..-.|...|.||.|||++..+|||||.|
T Consensus 221 ~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~-----~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D 294 (422)
T KOG0264|consen 221 TIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TS-----KPSHSVKAHSAEVNCVAFNPFNEFILATGSAD 294 (422)
T ss_pred EEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CC-----CCcccccccCCceeEEEeCCCCCceEEeccCC
Confidence 3466789999999999855 58999999999999999862 11 122 2234578899999999999999999999
Q ss_pred CcEEEEECCCC-cEEEE-------EEEEeecCCc-eEEEecCcc
Q 004989 679 GVVQVGQVLHL-IYFSA-------LYCIVLNKLL-IIFRYGMFQ 713 (720)
Q Consensus 679 ~~v~lWD~~tg-~~~~~-------v~~v~~~~~~-~~~~~~~~~ 713 (720)
+||+|||++.- +++.+ |++|-|+|-. .++++..+|
T Consensus 295 ~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D 338 (422)
T KOG0264|consen 295 KTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTD 338 (422)
T ss_pred CcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccC
Confidence 99999999743 34444 9999999865 344554444
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.9e-10 Score=122.97 Aligned_cols=109 Identities=17% Similarity=0.382 Sum_probs=81.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc--------ccc------cccce-----------------
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE--------NRD------IHYPV----------------- 650 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~--------~~~------~~~~~----------------- 650 (720)
.|.||+-+|++++++|.|..|+|||.|.+|+.|||.-.... +.+ +.|++
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~ 241 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLL 241 (641)
T ss_pred eccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEE
Confidence 45678999999999999999999999999999998641000 000 00111
Q ss_pred -------E----------Ee----cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcE----EEE---------EE
Q 004989 651 -------V----------EM----ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIY----FSA---------LY 696 (720)
Q Consensus 651 -------~----------~~----~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~----~~~---------v~ 696 (720)
. .| +|...|+|.||+|..+..+.|+++|||+|||||..-+. |.+ ++
T Consensus 242 DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~t 321 (641)
T KOG0772|consen 242 DRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVT 321 (641)
T ss_pred ccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCce
Confidence 0 11 23445799999999999999999999999999975433 232 78
Q ss_pred EEeecCCceEEEec
Q 004989 697 CIVLNKLLIIFRYG 710 (720)
Q Consensus 697 ~v~~~~~~~~~~~~ 710 (720)
+++||+.+..|+.|
T Consensus 322 sC~~nrdg~~iAag 335 (641)
T KOG0772|consen 322 SCAWNRDGKLIAAG 335 (641)
T ss_pred eeecCCCcchhhhc
Confidence 99999999887644
|
|
| >KOG1273 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.5e-10 Score=113.84 Aligned_cols=84 Identities=13% Similarity=0.249 Sum_probs=69.5
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEEeeCCccc-ccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004989 610 VCSLSFDRDGELFAAAGVNKKIKVFECDAII-NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~t 688 (720)
-.||.|||-|.++|.|..||.|-|||+.+.. ...... |-..|+|||||+++ ..|.|+|.|..|++||+..
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsa--------H~~pi~sl~WS~dg-r~LltsS~D~si~lwDl~~ 96 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSA--------HVRPITSLCWSRDG-RKLLTSSRDWSIKLWDLLK 96 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhc--------cccceeEEEecCCC-CEeeeecCCceeEEEeccC
Confidence 6899999999999999999999999998862 111122 34579999999965 5899999999999999999
Q ss_pred CcEEEE------EEEEeecC
Q 004989 689 LIYFSA------LYCIVLNK 702 (720)
Q Consensus 689 g~~~~~------v~~v~~~~ 702 (720)
|.+++. ||.+-|.|
T Consensus 97 gs~l~rirf~spv~~~q~hp 116 (405)
T KOG1273|consen 97 GSPLKRIRFDSPVWGAQWHP 116 (405)
T ss_pred CCceeEEEccCccceeeecc
Confidence 999887 56666654
|
|
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.9e-10 Score=122.76 Aligned_cols=94 Identities=13% Similarity=0.269 Sum_probs=82.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCCEEEEEEecCCCCEEEEEe--CCC
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSN--FEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~i~~l~w~~~~~~~laS~s--~D~ 679 (720)
+.+|...||.++|++||.+||+||.|.++.|||.... .|+ ....|...|..++|+|...++||||+ .|+
T Consensus 297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~--------~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~ 368 (484)
T KOG0305|consen 297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP--------EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR 368 (484)
T ss_pred hhcccceeeeeEECCCCCeeccCCCccceEeccCCCc--------cccEEEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence 6789999999999999999999999999999998433 233 34466888999999999999999987 699
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCc
Q 004989 680 VVQVGQVLHLIYFSA------LYCIVLNKLL 704 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------v~~v~~~~~~ 704 (720)
+|++||+.+|+.+.. |.++.|++..
T Consensus 369 ~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~ 399 (484)
T KOG0305|consen 369 CIKFWNTNTGARIDSVDTGSQVCSLIWSKKY 399 (484)
T ss_pred EEEEEEcCCCcEecccccCCceeeEEEcCCC
Confidence 999999999999987 7788887766
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-09 Score=108.19 Aligned_cols=134 Identities=15% Similarity=0.157 Sum_probs=109.5
Q ss_pred hhhhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc--------------
Q 004989 581 EGLCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-------------- 643 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-------------- 643 (720)
+.|-.+...++..|+-.+. -|.+.||++.|.||+.+.+.+++.||+.|.++||||+.++....
T Consensus 23 DLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~ 102 (327)
T KOG0643|consen 23 DLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFS 102 (327)
T ss_pred cEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeec
Confidence 3466788889999999987 38999999999999999999999999999999999987631100
Q ss_pred -------------------------------cccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcE
Q 004989 644 -------------------------------RDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIY 691 (720)
Q Consensus 644 -------------------------------~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~ 691 (720)
.+...|+.-+.+ .++|+..-|+|-+ ..|++|..||.|..||+++|+.
T Consensus 103 ~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~-~~ii~Ghe~G~is~~da~~g~~ 181 (327)
T KOG0643|consen 103 FGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLG-ETIIAGHEDGSISIYDARTGKE 181 (327)
T ss_pred cCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccC-CEEEEecCCCcEEEEEcccCce
Confidence 011234443433 6789999999954 5999999999999999999976
Q ss_pred EEE--------EEEEeecCCceEEEecCccce
Q 004989 692 FSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 692 ~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+.. ++.+-|+++..++.+||=|.-
T Consensus 182 ~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dtt 213 (327)
T KOG0643|consen 182 LVDSDEEHSSKINDLQFSRDRTYFITGSKDTT 213 (327)
T ss_pred eeechhhhccccccccccCCcceEEecccCcc
Confidence 654 889999999999999998754
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-09 Score=119.54 Aligned_cols=118 Identities=9% Similarity=0.048 Sum_probs=95.5
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE
Q 004989 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI 662 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l 662 (720)
.+.-.|++++-+.+.. .|++.|.||+-+|.--++.|+|.|.+||+||+... + ...+.+ +|..-|.+|
T Consensus 79 IrVfnynt~ekV~~Fe-----AH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~-w------a~~qtfeGH~HyVMqv 146 (794)
T KOG0276|consen 79 IRVFNYNTGEKVKTFE-----AHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-W------ACEQTFEGHEHYVMQV 146 (794)
T ss_pred EEEEecccceeeEEee-----ccccceeeeeecCCCCeEEecCCccEEEEeeccCc-e------eeeeEEcCcceEEEEE
Confidence 4555677777666654 45899999999999999999999999999999875 1 123333 345569999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc--eEEEecCcc
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL--IIFRYGMFQ 713 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~--~~~~~~~~~ 713 (720)
+|||.+.+.+||||-|+|||||.+.+..+..| |+||+|-+.+ -++.+|+=|
T Consensus 147 ~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD 206 (794)
T KOG0276|consen 147 AFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADD 206 (794)
T ss_pred EecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCC
Confidence 99999999999999999999999988777666 8999997766 577777655
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 720 | ||||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 8e-13 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 3e-11 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-04 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-04 |
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 720 | |||
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 3e-23 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 7e-20 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 1e-15 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 6e-14 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 3e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 8e-10 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 3e-09 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 9e-09 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 1e-08 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 2e-07 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 5e-07 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 8e-07 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 1e-06 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 2e-06 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 3e-06 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 3e-06 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 3e-06 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 4e-06 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 6e-06 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 1e-05 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 1e-05 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 2e-05 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 6e-05 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 9e-05 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 2e-04 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 2e-04 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 3e-04 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 6e-04 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 7e-04 |
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPK 336
Y SPE++ G S DI+ LG++LFEL FST E+ R ++ +R+ P K+P+
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQ 301
Query: 337 EASFCLWLLHPEPSGRPKMGELLQSEFL 364
E +L P P+ RP+ +++++
Sbjct: 302 EHMMVQDMLSPSPTERPEATDIIENAIF 329
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 7e-20
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLK 333
T Y SPE++ G S DI+ LG++LFEL PFST E+ RT++ +R+ PP K
Sbjct: 193 TKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQK 252
Query: 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366
+P E +L P P RP+ ++++ +
Sbjct: 253 YPCEYVMVQDMLSPSPMERPEAINIIENAVFED 285
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 1e-15
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLK 333
T Y SPE+++ D+Y LG++L EL T E ++ + LR ++
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI---- 239
Query: 334 FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAA 377
F K+ + LL +P RP E+L++ + + ER A
Sbjct: 240 FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHTA 284
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 6e-14
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Query: 277 YASPEELAGAPV-SCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRV--LPPQLLLK 333
Y + E L G + D+Y LG++ FE+ PFSTG E+ + LR PP
Sbjct: 196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 334 FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREA 376
K L+ +P+ RP LL S +L +EA
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEA 299
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 3e-11
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y +PE L G A+D++ LG+ + E+ C GE LR LPP+
Sbjct: 222 YMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQQLRQGYLPPEFTAG 276
Query: 334 FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
E S + +L P+P R LL L +P
Sbjct: 277 LSSELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 2e-10
Identities = 92/656 (14%), Positives = 186/656 (28%), Gaps = 203/656 (30%)
Query: 59 DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 118
DFE +H + + D L D FV + DV D PK +
Sbjct: 8 DFETGEH----QYQYKDIL------------SVFEDAFVDNFDCKDV-----QDMPKSIL 46
Query: 119 DVYECLHIF---------RQIVEIVYAAHSQGI---VVHNVRPS-CFVMSSFNHVSFIES 165
E HI ++ + + + + V +R + F+MS +
Sbjct: 47 SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI-KTEQRQP 105
Query: 166 ASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225
+ + + + N + + + LQ +LR+ L+L
Sbjct: 106 SMMTRMYIEQRD---RLYN--DNQVFAKYNVSRLQPYLKLRQALLEL------------- 147
Query: 226 MQSSSAYGTHVVLVEGM-------------QEHKILDNR------VNVEQVEEKKQPFPM 266
+ VL++G+ +K+ +N++ + M
Sbjct: 148 --RPAKN----VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201
Query: 267 KQILL--METNWYASPEELAGAPVSCASDIYRLGVLL----------------------- 301
Q LL ++ NW + + + + S L LL
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 302 FELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361
F L C + + + R + + L S L H + P + L
Sbjct: 262 FNLSC---------KILLTTRFKQVTDFLSAATTTHIS----LDHHSMTLTPDEVKSLLL 308
Query: 362 EFLNEPRDSMEEREAAIELREQIDEE---------ELLLEFLLLVQQRKQESAKKLQDIV 412
++L+ +L ++ E + + L K + KL I+
Sbjct: 309 KYLDCRPQ---------DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII 359
Query: 413 SFICSDIEEVSKQQAILRKKGGLGSFAELA--NDDLSGLNIPS---------------LN 455
S + + A RK F L+ +IP+ +
Sbjct: 360 E---SSLNVLE--PAEYRK-----MFDRLSVFPPS---AHIPTILLSLIWFDVIKSDVMV 406
Query: 456 IIDNDCSATMGSRKRFRPELQLH--HLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNF 513
+++ ++ ++ + + +LE ++ H RS+ + K F
Sbjct: 407 VVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH-------RSIVDHYNIPKTF 459
Query: 514 ------KKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINN--LGSK- 564
YF + + H L + + + ++ L K
Sbjct: 460 DSDDLIPPYLDQYFYSH----------IGHH--LKNIEHPERMTLFRMVFLDFRFLEQKI 507
Query: 565 --EGYSEGRRSGWINPFLEGLCKYLSF-SKLRVKADLNQGDLLN-----SSNLVCS 612
+ + +N + L Y + K + +L+ NL+CS
Sbjct: 508 RHDSTAWNASGSILNTLQQ-LKFYKPYICDNDPKYERLVNAILDFLPKIEENLICS 562
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.2 bits (150), Expect = 5e-10
Identities = 72/523 (13%), Positives = 152/523 (29%), Gaps = 128/523 (24%)
Query: 62 LRKHSDGVELTHGDHLR-NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRS 117
L K + V+ + LR N L + E P + + + R + D K +
Sbjct: 72 LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ-RQPSMMTRMYIEQRDRLYNDNQVFAKYN 130
Query: 118 VDVYECLHIFRQIVEIVYAAHSQGIVVHN-------------VRPSCFVMSSFNHVSFIE 164
V + RQ + + ++ +++ + ++
Sbjct: 131 VSRLQPYLKLRQALLEL--RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188
Query: 165 SASCSDSGSD-SHEEGLNTQNM----ETKDLSSPLPLDMLQRRTRLRR------------ 207
+C+ + + L Q D SS + L + + LRR
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 208 --EDLQ--------------LVTAPTNDLSEASCMQSSSAYGTHVVLVE---GMQEHKIL 248
++Q L+T T + S+A TH+ L + ++
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLT--TRFKQVTDFL--SAATTTHISLDHHSMTLTPDEVK 304
Query: 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA--SDIYRLGVLLFELFC 306
+ ++ + Q P E L P + ++ R G+ ++ +
Sbjct: 305 SLLLKY--LDCRPQDLP--------------REVLTTNPRRLSIIAESIRDGLATWDNW- 347
Query: 307 PFSTGEEKTRTM-SSLRHRVLPPQLLLK-------FPK-----EASFC-LWLLHPEPSGR 352
++ T + SSL VL P K FP +W +
Sbjct: 348 KHVNCDKLTTIIESSL--NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 353 PKMGELLQSEFLNEPRDSMEER----EAAIELREQIDEE-EL---LLEFLLLVQQRKQES 404
+ +L + + + E +EL+ +++ E L +++ + + +
Sbjct: 406 VVVNKLHKYSLVE--KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD 463
Query: 405 AKKLQD---IVSFI------CSDIEEVSKQQAI----------LRKKGGLGSFAELANDD 445
S I E ++ + + +R + + +
Sbjct: 464 LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT 523
Query: 446 LSGLNIPSLNIIDNDC--SATMGSRKRF--RPELQLHHLEECD 484
L L I DND + + F + E L + D
Sbjct: 524 LQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD 566
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 5e-06
Identities = 53/398 (13%), Positives = 121/398 (30%), Gaps = 103/398 (25%)
Query: 362 EFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIV----SFICS 417
+ + P+ + + E + + L F L+ ++++ K +++++ F+ S
Sbjct: 37 DVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMS 96
Query: 418 DIEEVSKQQAILRKKGGLGSFAE----LANDD--LSGLNIPSLNIIDNDCSATMGSRKRF 471
I+ +Q +++ + + E L ND+ + N+ R
Sbjct: 97 PIKTEQRQPSMMTRM-----YIEQRDRLYNDNQVFAKYNVS-----------------RL 134
Query: 472 RPELQLH-HLEECDDNLDDNQ-----------KHNLTGNEERSLFKSSRLMK------NF 513
+P L+L L E L + K + + S +K M N
Sbjct: 135 QPYLKLRQALLE----LRPAKNVLIDGVLGSGKTWVALDVCLS-YKVQCKMDFKIFWLNL 189
Query: 514 KKLESAYFL-----TRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYS 568
K S + + P+ HS + + ++ + L + Y
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS-----NIKLRIHSIQAELRRLLKSKPYE 244
Query: 569 EG-------RRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-- 619
+ + N F CK L ++ + D L ++ SL
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLS-CKILLTTRFKQVTD----FLSAATTTHISLDHHSMTLT 299
Query: 620 -----ELFAAAGVNKKIKVFECDA--IINENRDIHYPVVEMASRSKLSSIC-WNSYIKSQ 671
L K +C + E + + + + S + W+++
Sbjct: 300 PDEVKSLLL--------KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW--KH 349
Query: 672 IASSNFEGVVQVG-QVLHLIYFSALYCIVLNKLLIIFR 708
+ +++ VL + ++ L +F
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMF-----DRLSVFP 382
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 4e-04
Identities = 48/318 (15%), Positives = 97/318 (30%), Gaps = 85/318 (26%)
Query: 408 LQDIVS-FICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMG 466
V F C D++++ K IL K+ E+ D + +
Sbjct: 26 EDAFVDNFDCKDVQDMPKS--ILSKE-------EI--DHI--IMSKD------------- 59
Query: 467 SRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCR 526
L L Q+ E F L N+K L S +
Sbjct: 60 ------AVSGTLRLFWT---LLSKQE------EMVQKFVEEVLRINYKFLMSPI---KTE 101
Query: 527 PVKPSGRPLV---RHSQLSSDGRTSKPL-VNERSSINNLGSKEGYSEGRRSGWINPFLEG 582
+PS + + +L +D + V+ L ++ E R + + ++G
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL--RQALLELRPAKNV--LIDG 157
Query: 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSF----------DRDGELFAAAGVNKKIK 632
+ L K A D+ S + C + F + + + K +
Sbjct: 158 V---LGSGK-TWVA----LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM--LQKLLY 207
Query: 633 VFECDAIINENRDIHYPVVEMASRSKLSS-ICWNSYIKSQIASSNFEGVVQVGQVLHLIY 691
+ + + + + + +++L + Y + N VQ + +
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN----VQNAKAWN--A 261
Query: 692 FSALYCIVLNKLLIIFRY 709
F+ L C K+L+ R+
Sbjct: 262 FN-LSC----KILLTTRF 274
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 8e-10
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 12/113 (10%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---P 327
T +Y SPE P + SDI+ LG +L+EL F + +M +L +++
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF-----EAGSMKNLVLKIISGSF 242
Query: 328 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIE 379
P + L + + S L P RP + +L+ F+ + + + E
Sbjct: 243 PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAE 295
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 3e-09
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---P 327
T +Y SPE++ + SDI+ LG LL+EL PF + L ++
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELAGKIREGKF 233
Query: 328 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE 366
++ ++ E +L+ + RP + E+L++ + E
Sbjct: 234 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 9e-09
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 11/110 (10%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---- 326
T +Y SPE + + SDI+ LG LL+E+ PF + SL ++
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF---YGDKMNLYSLCKKIEQCDY 255
Query: 327 PPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 375
PP + +E ++P+P RP + + +
Sbjct: 256 PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEH 305
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 56.2 bits (135), Expect = 1e-08
Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 12/114 (10%)
Query: 274 TNWYASPEEL--AGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328
YA E L + A + A + ++LG+ ++ ++C PF + +P
Sbjct: 254 PVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPG 313
Query: 329 QLLLKFPKEAS-------FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 375
L F L+ + R E +++ + ++ +
Sbjct: 314 TDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSL 367
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 13/111 (11%), Positives = 33/111 (29%), Gaps = 14/111 (12%)
Query: 277 YASPEELAGAP-----VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328
+ L ++ A D + LG+ ++ ++C P + + R P
Sbjct: 278 TTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIP 337
Query: 329 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIE 379
Q + + L R + +++ + R + +
Sbjct: 338 QPV------RALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQ 382
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 30/177 (16%)
Query: 277 YASPEELAGAP-----------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR 322
Y PE + +S SD++ LG +L+ + PF + +
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL---- 230
Query: 323 HRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAA 377
H ++ P ++FP L +P R + ELL ++ + +
Sbjct: 231 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ---- 286
Query: 378 IELREQIDEEELLLEFLLLVQQRK--QESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
+ +E + +L L+ + ++AK L + S S SK R K
Sbjct: 287 -MAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSKTFEKKRGK 342
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 8e-07
Identities = 19/104 (18%), Positives = 31/104 (29%), Gaps = 16/104 (15%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFEL---FCPFSTGEEKTRTMSSLRHRVLPPQLLLK 333
+ +PE + P A+DIY +G L L G + +L
Sbjct: 243 FQAPEIVRTGPTV-ATDIYTVGRTLAALTLDLPTR-NGR-------YVDGLPEDDPVLKT 293
Query: 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAA 377
+ + P+P R E E + + E A
Sbjct: 294 YDSYGRLLRRAIDPDPRQRFTTAE----EMSAQLTGVLREVVAQ 333
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 26/175 (14%)
Query: 277 YASPEELAGAP-----------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR 322
Y PE + +S SD++ LG +L+ + PF + +
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL---- 277
Query: 323 HRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAA 377
H ++ P ++FP L +P R + ELL ++ + +
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKG 337
Query: 378 IELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
+ +L+ L ++AK L + S S SK R K
Sbjct: 338 TTEEMKYVLGQLV---GLNSPNSILKAAKTLYEHYSGGESHNSSSSKTFEKKRGK 389
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 2e-06
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 27/126 (21%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE-----------EKTRTMSSLR 322
Y SPE+ G +DIY +G++L+E+ PF GE + +++
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF-NGETAVSIAIKHIQDSVPNVTTDV 236
Query: 323 HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELRE 382
+ +P L ++ L + + R K + E ++ + E A E
Sbjct: 237 RKDIPQSL-------SNVILRATEKDKANRYKTIQ----EMKDDLSSVLHENRAN-EDVY 284
Query: 383 QIDEEE 388
++D+ +
Sbjct: 285 ELDKMK 290
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 23/119 (19%)
Query: 274 TNWYASPEELAGAP-----------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMS 319
T Y PE + +S SD++ LG +L+ + PF + +
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL- 249
Query: 320 SLRHRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373
H ++ P ++FP L +P R + ELL ++ + +
Sbjct: 250 ---HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 305
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y +PE L+ S D++ +G +++ L PF +T + R+ +
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKETYLRIK--KNEYS 259
Query: 334 FPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNE 366
PK + +L +P+ RP + ELL EF
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 3e-06
Identities = 13/111 (11%), Positives = 34/111 (30%), Gaps = 22/111 (19%)
Query: 274 TNWYASPEELA-----------GAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMS 319
+ + PE A ++ + D + LG++++ ++C P T +
Sbjct: 265 SRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI-TKDAALGGSE 323
Query: 320 SLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369
+ P+ + L R + +++ + R
Sbjct: 324 WIFRSCKN------IPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT 368
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 4e-06
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y +PE L+ S D++ +G +++ L PF +T + R+ +
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKETYLRIK--KNEYS 233
Query: 334 FPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNE 366
PK + +L +P+ RP + ELL EF
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 6e-06
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 10/100 (10%)
Query: 274 TNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 329
+ + + E L +DI+ L + + G++ +R LP
Sbjct: 193 DSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----WHEIRQGRLPR- 247
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368
+ +E ++HP+P RP L++ L
Sbjct: 248 IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 24/99 (24%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE-----------EKTRTMSSLR 322
Y SPE+ G V SD+Y LG +L+E+ PF TG+ E S+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSVAYQHVREDPIPPSARH 243
Query: 323 HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQ 360
+ L + L L P R + E+
Sbjct: 244 EGL-SADL-------DAVVLKALAKNPENRYQTAAEMRA 274
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF---CPFSTGE 312
Y +PE + + + +DIY L +L+E P+ G+
Sbjct: 201 YMAPERFSESHATYRADIYALTCVLYECLTGSPPY-QGD 238
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y SPE + SD++ LG + + L PF T T+ + ++V+ +
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF-----DTDTVKNTLNKVV--LADYE 230
Query: 334 FPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREA 376
P S LL P+ R + +L F++ + + E
Sbjct: 231 MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 6e-05
Identities = 21/171 (12%), Positives = 56/171 (32%), Gaps = 29/171 (16%)
Query: 274 TNWYASPEELAG---APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVL 326
T + +PE L+ + DI+ G + + + PF ++ + +
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLD 248
Query: 327 PPQLLLKFPKEAS-FCLWLLHPEPSGRPKMGELL----------QSEFLNEPRDSMEERE 375
A ++ +P RP +L Q +F + D +E+
Sbjct: 249 CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKES 308
Query: 376 AAIELREQIDE-----------EELLLEFLLLVQQRKQESAKKLQDIVSFI 415
+ +Q++ E + + +++ + ++D++ +
Sbjct: 309 LDGPIVKQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVRDLLRAM 359
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 9e-05
Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Query: 277 YASPE---ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
Y +PE + + +D++ LG +L+ + P+ +K +++ L
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ 268
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
+ ++ +P RP + LL
Sbjct: 269 SPRHSSALWQLLNSMMTVDPHQRPHIPLLLS 299
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 14/135 (10%)
Query: 277 YASPEELAGAPVSCA-SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
Y +PE L G P +++ LGV L+ L PF E T+ + PP
Sbjct: 195 YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF---CELEETV---EAAIHPPY--- 245
Query: 333 KFPKEASFCL-WLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLL 391
KE + LL P P R + +L+ ++ +P + + + + + L
Sbjct: 246 LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSA 305
Query: 392 EFLLLVQQRKQESAK 406
L + + + A+
Sbjct: 306 ASLEMGNRSLSDVAQ 320
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 30/141 (21%), Positives = 43/141 (30%), Gaps = 49/141 (34%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFE------LFCPFSTGE--------------- 312
T Y S E L G+ + +DI+ + FE LF P S E
Sbjct: 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL 315
Query: 313 --------EKTRTMS-------SLRH-RVLPPQLL-------LKFPKE-----ASFCLWL 344
+ L+H L P L ++ +E F L +
Sbjct: 316 GKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPM 375
Query: 345 LHPEPSGRPKMGELLQSEFLN 365
L P R E L+ +LN
Sbjct: 376 LELIPEKRATAAECLRHPWLN 396
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 10/113 (8%)
Query: 277 YASPE---ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
Y +PE + P+ DI+ LG +L+ L PF E + + + P
Sbjct: 216 YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGKYSIPPH 271
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQ 383
++ S +L P R + E++ ++ + EL EQ
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLEQ 324
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 20/122 (16%)
Query: 277 YASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL------ 326
YA+PE G D++ LGV+L+ L PF + + LR RVL
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-----DGQNLKELRERVLRGKYRI 233
Query: 327 PPQLLLKFPKEASFCL-WLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQID 385
P + + L L P R + ++++ ++N + E + + D
Sbjct: 234 PFYM----STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 289
Query: 386 EE 387
++
Sbjct: 290 QK 291
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 7e-04
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 22/105 (20%)
Query: 277 YASPEEL-----AGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328
Y+ PE + P ++ LG+LL+++ C PF +++ L + P
Sbjct: 204 YSPPEWISRHQYHALPA----TVWSLGILLYDMVCGDIPFE-RDQEI-----LEAELHFP 253
Query: 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372
+ + L P+PS RP + E+L ++ P + +
Sbjct: 254 A---HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVP 295
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 720 | |||
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.98 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.98 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.98 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.98 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.98 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.98 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.98 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.98 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.98 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.98 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.98 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.98 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.98 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.98 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.98 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.98 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.98 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.98 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.98 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.98 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.98 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.98 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.98 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.98 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.97 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.97 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.97 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.97 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.97 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.97 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.97 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.97 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.97 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.97 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.97 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.97 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.97 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.97 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.97 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.97 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.97 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.97 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.97 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.97 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.97 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.97 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.97 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.97 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.97 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.97 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.97 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.97 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.97 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.97 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.97 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.97 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.97 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.97 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.97 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.97 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.97 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.97 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.97 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.97 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.97 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.97 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.97 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.97 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.97 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.97 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.97 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.97 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.97 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.97 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.97 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.97 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.97 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.97 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.97 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.97 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.97 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.97 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.97 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.97 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.97 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.97 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.97 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.97 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.97 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.97 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.97 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.97 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.96 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.96 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.96 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.96 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.96 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.96 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.96 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.96 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.96 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.96 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.96 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.96 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.96 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.95 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.95 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.95 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.94 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.92 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.73 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.58 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.58 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.57 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.55 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.54 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.54 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.53 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.52 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.52 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.52 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.52 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.52 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.51 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.51 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.5 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.49 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.49 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.48 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.48 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.48 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.48 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.48 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.48 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.48 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.47 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.47 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.46 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.45 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.45 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.44 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.44 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.44 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.44 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.43 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.43 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.43 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.43 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.42 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.41 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.4 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.4 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.4 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.4 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.39 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.39 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.38 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.38 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.37 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.37 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.37 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.34 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.34 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.33 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.33 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.33 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.32 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.32 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.32 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.31 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.3 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.29 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.29 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.29 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.28 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.28 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.27 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.27 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.27 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.27 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.27 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.25 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.25 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.25 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.24 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.24 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.24 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.22 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.22 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.22 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.22 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.22 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.21 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.21 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.21 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.21 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.21 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.21 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.2 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.2 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.2 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.2 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.2 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.2 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.18 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.18 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.18 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.17 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.17 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.17 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.17 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.16 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.16 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.16 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.16 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.15 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.14 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.13 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.13 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.12 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.12 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.12 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.11 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.1 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.1 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.09 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.08 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.08 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.07 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.06 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.05 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.04 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.03 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.02 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 98.99 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 98.95 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 98.93 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 98.93 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.93 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 98.92 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 98.9 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 98.84 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 98.72 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 98.51 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 98.5 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 98.4 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 98.37 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 98.34 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.32 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 98.32 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.31 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 98.3 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 98.26 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 98.24 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 98.24 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 98.21 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 98.21 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 98.2 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 98.2 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 98.19 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 98.18 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.17 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 98.16 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.15 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.15 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 98.15 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 98.14 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 98.12 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 98.07 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.05 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.02 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 98.01 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 98.0 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 97.99 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 97.98 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 97.96 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 97.93 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 97.9 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 97.88 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 97.87 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.86 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 97.85 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 97.82 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 97.72 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 97.62 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 97.59 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 97.55 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 97.53 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 97.52 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 97.51 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 97.47 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 97.42 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 97.38 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 97.35 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 97.31 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 97.3 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 97.28 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 97.25 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 97.25 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 97.21 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 97.18 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 97.1 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.06 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 97.04 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 97.04 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 96.93 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 96.83 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.75 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 96.63 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 96.61 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 96.44 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 96.41 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 96.26 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 96.23 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 96.15 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 96.14 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.04 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 96.0 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 95.95 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 95.9 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 95.87 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 95.73 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 95.66 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 95.56 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 95.53 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 95.46 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 95.35 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 95.28 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 95.27 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 95.23 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 95.16 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 95.09 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 95.06 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 94.91 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 94.62 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 94.57 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 94.45 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 94.39 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 94.13 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 94.1 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 94.09 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 94.04 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 94.01 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 93.62 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 93.21 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 92.79 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 92.71 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 92.66 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 92.52 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 92.45 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 92.38 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 92.32 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 92.21 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 91.97 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 91.67 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 91.36 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 91.31 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 90.89 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 89.69 |
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=388.94 Aligned_cols=211 Identities=14% Similarity=0.149 Sum_probs=173.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.+|++++|||||++++++.........+|+|||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||++|
T Consensus 71 ~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~ 149 (290)
T 3fpq_A 71 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4558899999999999999999433322333468999999 8999999996543 4999999999999999999999998
Q ss_pred --ceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 --IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 --IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||||+||||+ .+|.+||+|||+|+.....
T Consensus 150 ~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-------------------------------------------- 185 (290)
T 3fpq_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------- 185 (290)
T ss_dssp SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------
T ss_pred CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC--------------------------------------------
Confidence 99999999999998 4789999888887321000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|||||++.+ .|+.++||||||
T Consensus 186 ------------------------------------------------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlG 216 (290)
T 3fpq_A 186 ------------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFG 216 (290)
T ss_dssp ------------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHH
T ss_pred ------------------------------------------------ccCCcccCccccCHHHcCC-CCCcHHHHHHHH
Confidence 0012579999999999976 499999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||||+| ||.........+..+.....|+.+....+ ...+||.+||++||++|||+.|+|+||||++.
T Consensus 217 vilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 217 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 99999999 78766666677777777777776665554 45599999999999999999999999999863
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=391.84 Aligned_cols=246 Identities=24% Similarity=0.348 Sum_probs=183.9
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCC--------CCCcEEEEEec-CCCCHHHHHh
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA--------AIDPFVHAIEW-GDVSLRQWLD 112 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--------~~~~~~lv~E~-~ggsL~~~L~ 112 (720)
.+.++++++.... .....-+..+|..+|++++|||||++++++...+. ...++|+|||| .|++|.++|.
T Consensus 30 ~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~ 107 (299)
T 4g31_A 30 DCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN 107 (299)
T ss_dssp CCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHH
T ss_pred CCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHH
Confidence 4455556554332 12222344588999999999999999995443332 12247999999 8999999996
Q ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCC
Q 004989 113 KPKR--SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDL 190 (720)
Q Consensus 113 ~~~~--~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~ 190 (720)
.... ..++..++.|+.||+.||+|||++|||||||||+||||+.++.+||+|||+|+..........
T Consensus 108 ~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~----------- 176 (299)
T 4g31_A 108 GRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT----------- 176 (299)
T ss_dssp TCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC----------------------
T ss_pred hcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccc-----------
Confidence 5432 245677999999999999999999999999999999999999999999999865432211000
Q ss_pred CCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccc
Q 004989 191 SSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQIL 270 (720)
Q Consensus 191 ~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 270 (720)
.. . ........+.
T Consensus 177 ------------------~~--~-----------------------------------------------~~~~~~~~~~ 189 (299)
T 4g31_A 177 ------------------VL--T-----------------------------------------------PMPAYARHTG 189 (299)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------cc--c-----------------------------------------------ccccccccCC
Confidence 00 0 0000001122
Q ss_pred cccCCcccCcccccCCCCCccccchhhhchhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCC
Q 004989 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 271 ~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~ 350 (720)
.+||+.|||||++.+..|+.++|||||||+||||++||....+....+..+....+|+.+....|...+||.+||++||.
T Consensus 190 ~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~ 269 (299)
T 4g31_A 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPM 269 (299)
T ss_dssp --CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGG
T ss_pred cccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHccCCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChh
Confidence 58999999999999999999999999999999999999876666667777777888887777788888999999999999
Q ss_pred CCCChHHHHcCcccCCC
Q 004989 351 GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~ 367 (720)
+|||+.|+|+||||++.
T Consensus 270 ~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 270 ERPEAINIIENAVFEDL 286 (299)
T ss_dssp GSCCHHHHHTSGGGCCC
T ss_pred HCcCHHHHhcCHhhCCC
Confidence 99999999999999876
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-45 Score=389.97 Aligned_cols=239 Identities=15% Similarity=0.260 Sum_probs=184.7
Q ss_pred cccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec
Q 004989 30 RALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW 102 (720)
Q Consensus 30 ~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~ 102 (720)
+.+|.++++. .+.+.++++++...... ..-+..+|+.+|++++|||||++++ +++++. .+|+||||
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~---~~~ivmEy 152 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVMEF 152 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEECC
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeC
Confidence 3455555544 34455666666544322 1223347888999999999999999 565554 68999999
Q ss_pred -CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccc
Q 004989 103 -GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLN 181 (720)
Q Consensus 103 -~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~ 181 (720)
.||+|.+++.+. .+++.+++.|++||+.||+|||++|||||||||+||||+.+|++||+|||+|+......
T Consensus 153 ~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~------ 224 (346)
T 4fih_A 153 LEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------ 224 (346)
T ss_dssp CTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS------
T ss_pred CCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC------
Confidence 899999999653 39999999999999999999999999999999999999999999999998884331110
Q ss_pred cccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhccc
Q 004989 182 TQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKK 261 (720)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~ 261 (720)
+
T Consensus 225 ---------------------------~---------------------------------------------------- 225 (346)
T 4fih_A 225 ---------------------------P---------------------------------------------------- 225 (346)
T ss_dssp ---------------------------C----------------------------------------------------
T ss_pred ---------------------------C----------------------------------------------------
Confidence 0
Q ss_pred CCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCC-ccccc-cCch
Q 004989 262 QPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLL-KFPK 336 (720)
Q Consensus 262 ~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~-~~p~ 336 (720)
.....+||++|||||++.+..|+.++|||||||+||||++ ||...... ..+..+.....+ ..... ..+.
T Consensus 226 -----~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~ 299 (346)
T 4fih_A 226 -----RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPPRLKNLHKVSPS 299 (346)
T ss_dssp -----CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSSCCCCSCGGGSCHH
T ss_pred -----cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCCccccCCHH
Confidence 0012589999999999999999999999999999999999 77665544 445555544322 22223 3445
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
..+||.+||.+||++|||+.|+|+||||++..
T Consensus 300 ~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 300 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 56999999999999999999999999998763
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=381.11 Aligned_cols=227 Identities=17% Similarity=0.233 Sum_probs=170.2
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHH
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 121 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~ 121 (720)
.+.++++.+............+..+|..+|++++|||||++++ ++++.. .+|+||||.+|+|.++|.+.+ .+++.
T Consensus 38 ~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~ivmEy~~g~L~~~l~~~~-~l~e~ 112 (275)
T 3hyh_A 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD-VIKSKD---EIIMVIEYAGNELFDYIVQRD-KMSEQ 112 (275)
T ss_dssp CCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCEEHHHHHHHSC-SCCHH
T ss_pred CCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCHHHHHHHcC-CCCHH
Confidence 3444555443332222333345568889999999999999999 666554 689999998889999996554 49999
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.|++||+.||+|||++|||||||||+|||++.++++||+|||+|+......
T Consensus 113 ~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-------------------------- 166 (275)
T 3hyh_A 113 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------------------------- 166 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC--------------------------
Confidence 999999999999999999999999999999999999999999988874321100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.....+||+.|||||
T Consensus 167 -----------------------------------------------------------------~~~~~~GT~~Y~APE 181 (275)
T 3hyh_A 167 -----------------------------------------------------------------FLKTSCGSPNYAAPE 181 (275)
T ss_dssp -------------------------------------------------------------------------CTTSCHH
T ss_pred -----------------------------------------------------------------ccCCeeECcccCChh
Confidence 001147999999999
Q ss_pred cccCCCC-Cccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChH
Q 004989 282 ELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMG 356 (720)
Q Consensus 282 ~l~~~~~-s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~ 356 (720)
++.+..| ++++|||||||++|||++ ||...... ..+..+....++ ++.. .+...+||.+||++||++|||++
T Consensus 182 ~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~s~~ 258 (275)
T 3hyh_A 182 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNGVYT--LPKFLSPGAAGLIKRMLIVNPLNRISIH 258 (275)
T ss_dssp HHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred hhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHccCChhHCcCHH
Confidence 9998886 689999999999999999 77665443 455555554332 2223 34556999999999999999999
Q ss_pred HHHcCcccCCC
Q 004989 357 ELLQSEFLNEP 367 (720)
Q Consensus 357 eiL~hp~~~~~ 367 (720)
|+|+||||+..
T Consensus 259 eil~hpw~k~~ 269 (275)
T 3hyh_A 259 EIMQDDWFKVD 269 (275)
T ss_dssp HHHHCHHHHTT
T ss_pred HHHcCcccccC
Confidence 99999999754
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=393.15 Aligned_cols=243 Identities=17% Similarity=0.213 Sum_probs=184.5
Q ss_pred CcccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEe
Q 004989 29 SRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIE 101 (720)
Q Consensus 29 ~~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E 101 (720)
.+.+|.++++. .+.+.++++.+..... ......+..+|+.+|++++|||||++++ +++++. .+|+|||
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~-~~~~~~---~~yiVmE 103 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRE-SFEENG---SLYIVMD 103 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEE
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEE-EEEECC---EEEEEEe
Confidence 44555555554 3345555555543322 2222334558999999999999999999 555543 6899999
Q ss_pred c-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccc
Q 004989 102 W-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEG 179 (720)
Q Consensus 102 ~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~ 179 (720)
| .||+|.++|. +.+..+++.+++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+......
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV---- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH----
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc----
Confidence 9 8999999994 344558999999999999999999999999999999999999999999999888884321000
Q ss_pred cccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhc
Q 004989 180 LNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEE 259 (720)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~ 259 (720)
.
T Consensus 180 -----------------------------~-------------------------------------------------- 180 (350)
T 4b9d_A 180 -----------------------------E-------------------------------------------------- 180 (350)
T ss_dssp -----------------------------H--------------------------------------------------
T ss_pred -----------------------------c--------------------------------------------------
Confidence 0
Q ss_pred ccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch
Q 004989 260 KKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK 336 (720)
Q Consensus 260 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~ 336 (720)
.....+||+.|||||++.+..|+.++|||||||+||||++ ||...... ..+..+....+|+......+.
T Consensus 181 -------~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~~~~~~~~~s~~ 252 (350)
T 4b9d_A 181 -------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-NLVLKIISGSFPPVSLHYSYD 252 (350)
T ss_dssp -------HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCCTTSCHH
T ss_pred -------cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCCccCCHH
Confidence 0012579999999999999999999999999999999999 78766554 445555555555443334445
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+||.+||++||++|||+.|+|+||||+..
T Consensus 253 ~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 253 LRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 5699999999999999999999999999865
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=388.13 Aligned_cols=244 Identities=17% Similarity=0.210 Sum_probs=184.5
Q ss_pred CCcccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEE
Q 004989 28 SSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAI 100 (720)
Q Consensus 28 ~~~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~ 100 (720)
..+.+|.++++. .+.+.++++.+...........-+..+|..+|++++|||||++++ +++++. .+|+||
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~yivm 111 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF-TFQDDE---KLYFGL 111 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEE
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEE
Confidence 345566666654 333444444443221111222334457888999999999999999 666654 689999
Q ss_pred ec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccc
Q 004989 101 EW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEG 179 (720)
Q Consensus 101 E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~ 179 (720)
|| .||+|.++|.+.+ .+++.+++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+........
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~-- 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-- 188 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC--
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc--
Confidence 99 8999999996544 4999999999999999999999999999999999999999999999999988543211000
Q ss_pred cccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhc
Q 004989 180 LNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEE 259 (720)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~ 259 (720)
T Consensus 189 -------------------------------------------------------------------------------- 188 (311)
T 4aw0_A 189 -------------------------------------------------------------------------------- 188 (311)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCc
Q 004989 260 KKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFP 335 (720)
Q Consensus 260 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p 335 (720)
......+||+.|||||++.+..|+.++|||||||+||||++ ||...+.. ..+..+.+..+. ++. .++
T Consensus 189 ------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~--~p~~~s~ 259 (311)
T 4aw0_A 189 ------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-LIFAKIIKLEYD--FPEKFFP 259 (311)
T ss_dssp ------CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC--CCTTCCH
T ss_pred ------ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCC--CCcccCH
Confidence 00112589999999999999999999999999999999999 77765544 444445443321 222 344
Q ss_pred hHHHHHHHcCCCCCCCCCChHH------HHcCcccCCC
Q 004989 336 KEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~e------iL~hp~~~~~ 367 (720)
...+||.+||.+||++|||++| |++||||+..
T Consensus 260 ~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 260 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp HHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 5569999999999999999988 5899999986
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-44 Score=391.29 Aligned_cols=240 Identities=16% Similarity=0.262 Sum_probs=184.9
Q ss_pred CcccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEe
Q 004989 29 SRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIE 101 (720)
Q Consensus 29 ~~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E 101 (720)
.+.+|.|+++. .+.+.++++++...... ..-+..+|+.+|++++|||||++|+ +++++. .+|+|||
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~---~~~iVmE 228 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVME 228 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCCCceEE-EEEECC---EEEEEEe
Confidence 44555555554 33455666665543322 2223447888999999999999999 565554 6899999
Q ss_pred c-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccc
Q 004989 102 W-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 102 ~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~ 180 (720)
| .||+|.+++... .+++.+++.|++||+.||+|||++|||||||||+||||+.+|++||+|||+|+......
T Consensus 229 y~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~----- 301 (423)
T 4fie_A 229 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 301 (423)
T ss_dssp CCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-----
T ss_pred CCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-----
Confidence 9 899999999543 39999999999999999999999999999999999999999999999999884331110
Q ss_pred ccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004989 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
.
T Consensus 302 ----------------------------~--------------------------------------------------- 302 (423)
T 4fie_A 302 ----------------------------P--------------------------------------------------- 302 (423)
T ss_dssp ----------------------------C---------------------------------------------------
T ss_pred ----------------------------c---------------------------------------------------
Confidence 0
Q ss_pred cCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCC-cccccc-Cc
Q 004989 261 KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLK-FP 335 (720)
Q Consensus 261 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~-~p 335 (720)
.....+||++|||||++.+..|+.++|||||||++|||++ ||...... ..+..+.....+ ...... .+
T Consensus 303 ------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~~~~~~~~s~ 375 (423)
T 4fie_A 303 ------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPPRLKNLHKVSP 375 (423)
T ss_dssp ------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCCCSCTTSSCH
T ss_pred ------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCcccccCCH
Confidence 0012589999999999999999999999999999999999 77665544 445555544322 122223 34
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+||.+||.+||.+|||+.|+|+||||+...
T Consensus 376 ~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 376 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence 556999999999999999999999999998763
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=382.83 Aligned_cols=210 Identities=18% Similarity=0.241 Sum_probs=165.6
Q ss_pred hhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+..+|..+|++++|||||++++ +++++. .+|+|||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||+
T Consensus 70 ~~~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~ 144 (304)
T 3ubd_A 70 RVRTKMERDILVEVNHPFIVKLHY-AFQTEG---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHS 144 (304)
T ss_dssp CC------CCCCCCCCTTEECEEE-EEEETT---EEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 335567888999999999999999 665553 68999999 8999999996544 49999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.+|++||+|||+|+......
T Consensus 145 ~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-------------------------------------------- 180 (304)
T 3ubd_A 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-------------------------------------------- 180 (304)
T ss_dssp TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-------------------------------------------------
T ss_pred CCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC--------------------------------------------
Confidence 999999999999999999999999988884321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......+||+.|||||++.+..|+.++|||||||
T Consensus 181 ----------------------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGv 214 (304)
T 3ubd_A 181 ----------------------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGV 214 (304)
T ss_dssp ----------------------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHH
Confidence 0001257999999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
+||||++ ||.+.+.. ..+..+.+..++. .....+...+||.+||++||++|||+ +|+++||||+..
T Consensus 215 ilyemltG~~PF~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 215 LMFEMLTGTLPFQGKDRK-ETMTMILKAKLGM-PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCC-CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCcCHH-HHHHHHHcCCCCC-CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 9999999 78766554 4444444433221 11233455699999999999999984 799999999986
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=384.36 Aligned_cols=215 Identities=16% Similarity=0.101 Sum_probs=167.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|++++|||||++|+ +++++. .+|+|||| .||+|.++|++.+ .+++.+++.|+.||+.||+|||++|||
T Consensus 98 ~~E~~il~~l~HpnIV~l~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~Ii 172 (336)
T 4g3f_A 98 VEELVACAGLSSPRIVPLYG-AVREGP---WVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRIL 172 (336)
T ss_dssp THHHHTTTTCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 46888999999999999999 565553 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 144 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 144 HrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
||||||+||||+.+| ++||+|||+|+........ +
T Consensus 173 HRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~------------------------------------~-------- 208 (336)
T 4g3f_A 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG------------------------------------K-------- 208 (336)
T ss_dssp CSCCCGGGEEECTTSCCEEECCCTTCEEC---------------------------------------------------
T ss_pred ecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc------------------------------------c--------
Confidence 999999999999887 6999999988543221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........+||+.|||||++.+..|+.++|||||||+||
T Consensus 209 -----------------------------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvily 247 (336)
T 4g3f_A 209 -----------------------------------------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 247 (336)
T ss_dssp ----------------------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred -----------------------------------------ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHH
Confidence 000011257999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchH-HHHHHHcCCCCCCCCCChHHH-------------HcCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKE-ASFCLWLLHPEPSGRPKMGEL-------------LQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~ei-------------L~hp~~ 364 (720)
||++ ||...... ..+..+.....+ ..++..++.. .+||.+||++||.+|||+.|+ |+|||+
T Consensus 248 emltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~ 326 (336)
T 4g3f_A 248 HMLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK 326 (336)
T ss_dssp HHHHSSCSSTTTCCS-CCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred HHHHCcCCCCCCCHH-HHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence 9999 77654433 223333333322 2344444444 599999999999999999998 569999
Q ss_pred CCCccc
Q 004989 365 NEPRDS 370 (720)
Q Consensus 365 ~~~~~~ 370 (720)
.+..++
T Consensus 327 ~~~~~P 332 (336)
T 4g3f_A 327 GEYKEP 332 (336)
T ss_dssp SSCCCC
T ss_pred CCCCCC
Confidence 887554
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=385.03 Aligned_cols=221 Identities=15% Similarity=0.161 Sum_probs=168.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~---~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|+.+|++++|||||++++ ++... .....+|+||||.+|+|.++|.+. ..+++.+++.|++||+.||.|||+
T Consensus 99 ~~~~Ei~il~~l~HpnIv~l~~-~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~ 176 (398)
T 4b99_A 99 RTLRELKILKHFKHDNIIAIKD-ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHS 176 (398)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSSCTTTCCCEEEEEECCSEEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcceEee-eeecccccccCCEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4558999999999999999999 44332 223468999999778999999554 459999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.+|.+||+|||+++.+......
T Consensus 177 ~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~------------------------------------------ 214 (398)
T 4b99_A 177 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE------------------------------------------ 214 (398)
T ss_dssp TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC------------------------------------------------
T ss_pred CcCcCCCcCccccccCCCCCEEEeecceeeecccCccc------------------------------------------
Confidence 99999999999999999999999999988543221000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
........+||++|||||++.+.. |+.++||||||
T Consensus 215 --------------------------------------------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG 250 (398)
T 4b99_A 215 --------------------------------------------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250 (398)
T ss_dssp ---------------------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred --------------------------------------------cccccccceeChHhcCHHHhcCCCCCCChhheehhH
Confidence 000011258999999999998865 79999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CCCCcc----------------------------ccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ----------------------------LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~----------------------------~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||.+.+........+.. +.++.. +....+...+||.+||.
T Consensus 251 ~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~ 330 (398)
T 4b99_A 251 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLR 330 (398)
T ss_dssp HHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCc
Confidence 99999999 77766554333222211 111110 01123445699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
+||.+|||+.|+|+||||++..++.
T Consensus 331 ~dP~~R~ta~e~L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 331 FEPSARISAAAALRHPFLAKYHDPD 355 (398)
T ss_dssp SSTTTSCCHHHHTTSGGGTTTCCGG
T ss_pred CChhHCcCHHHHhcCHhhCcCCCCc
Confidence 9999999999999999999875543
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=359.97 Aligned_cols=238 Identities=15% Similarity=0.186 Sum_probs=175.3
Q ss_pred CcccccccccC----CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-C
Q 004989 29 SRALNISGVSD----RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-G 103 (720)
Q Consensus 29 ~~~~~~~~~~~----~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ 103 (720)
.+.+|.++++. ...+.++++.+.... .+....-+..+|+.+|++++|||||++++ ++..+ .+|+|||| .
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g-~~~~~----~~~iVmEy~~ 114 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMTKD----NLAIVTQWCE 114 (307)
T ss_dssp EEECCCCSSSEEEEEESSSEEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCS
T ss_pred eeEEeeCCCcEEEEEEECCcEEEEEEEecC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEE-EEECC----eEEEEEEcCC
Confidence 33455555544 333344544443222 22222234458899999999999999999 55433 46999999 9
Q ss_pred CCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccc
Q 004989 104 DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQ 183 (720)
Q Consensus 104 ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~ 183 (720)
||+|.++|......+++.++..|+.||+.||.|||++|||||||||+||||+.++++||+|||+|+........
T Consensus 115 gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~------ 188 (307)
T 3omv_A 115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS------ 188 (307)
T ss_dssp SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------------
T ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc------
Confidence 99999999766667999999999999999999999999999999999999999999999988887432111000
Q ss_pred cccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCC
Q 004989 184 NMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQP 263 (720)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~ 263 (720)
T Consensus 189 -------------------------------------------------------------------------------- 188 (307)
T 3omv_A 189 -------------------------------------------------------------------------------- 188 (307)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccCCcccCcccccCC---CCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccC
Q 004989 264 FPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKF 334 (720)
Q Consensus 264 ~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~ 334 (720)
......+||+.|||||++.+. +|+.++|||||||+||||+| ||............+..+..+|. ....+
T Consensus 189 --~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 266 (307)
T 3omv_A 189 --QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC 266 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTS
T ss_pred --eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccc
Confidence 000124799999999999643 48999999999999999999 88776655555555555544433 33344
Q ss_pred ch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 335 PK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 335 p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|. ..+|+.+||+.||++|||+.||++
T Consensus 267 ~~~l~~li~~cl~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 267 PKAMKRLVADCVKKVKEERPLFPQILS 293 (307)
T ss_dssp CHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred hHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 44 459999999999999999998764
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=363.87 Aligned_cols=236 Identities=18% Similarity=0.222 Sum_probs=163.4
Q ss_pred hhchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+..+|..+|..+ +|||||++++ ++++.. ++|+|||| .|++|.++++ .+++.+++.|++||+.||+|||+
T Consensus 64 ~~~~~E~~~l~~~~~h~nIv~l~~-~~~~~~---~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~ 135 (361)
T 4f9c_A 64 IRIAAELQCLTVAGGQDNVMGVKY-CFRKND---HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQ 135 (361)
T ss_dssp HHHHHHHHHHHHTCSBTTBCCCSE-EEEETT---EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceEEE-EEEECC---EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4555788888887 6999999999 665554 68999999 8999999993 39999999999999999999999
Q ss_pred CCceeccCCCCcEEEccC-CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+|||||||||+|||++.+ +.+||+|||+|+........ ..+|+.......
T Consensus 136 ~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~-----------------------------~~~~~~~~~~~~ 186 (361)
T 4f9c_A 136 FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE-----------------------------LLKFVQSEAQQE 186 (361)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG-----------------------------GGGGC-------
T ss_pred CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc-----------------------------cccccccccccc
Confidence 999999999999999866 89999999999654332111 122211111000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
......+ . .. ..........+||++|+|||++.+.. |+.++||||+
T Consensus 187 ~~~~~~~---~--------------------~~----------~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSl 233 (361)
T 4f9c_A 187 RCSQNKC---S--------------------IC----------LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSA 233 (361)
T ss_dssp ----------------------------------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHH
T ss_pred ccccccc---c--------------------cc----------ccccccccccccCccccCHHHHcCCCCCCCccchhhh
Confidence 0000000 0 00 00000112368999999999998865 8999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc---------------------CCCC--------------------------
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH---------------------RVLP-------------------------- 327 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~---------------------~~~p-------------------------- 327 (720)
||++|||++ ||.+.......+..+.. ...|
T Consensus 234 G~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~ 313 (361)
T 4f9c_A 234 GVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQ 313 (361)
T ss_dssp HHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC--------------
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccc
Confidence 999999999 77655433222222110 0000
Q ss_pred ------ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 328 ------PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 328 ------~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+.+....+...|||.+||++||++|||++|+|+||||++.
T Consensus 314 ~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 314 GHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp --------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred cccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 0011122344599999999999999999999999999875
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=350.93 Aligned_cols=204 Identities=19% Similarity=0.189 Sum_probs=162.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC------------CCCCCHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------------KRSVDVYECLHIFRQ 129 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~------------~~~l~~~~~~~i~~Q 129 (720)
+..+|+.+|++++|||||++++ ++.++. .+|+|||| .+|+|.++|.+. ...+++.+++.|+.|
T Consensus 61 ~f~~E~~il~~l~HpnIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 136 (299)
T 4asz_A 61 DFHREAELLTNLQHEHIVKFYG-VCVEGD---PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCccEEE-EEeeCC---EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHH
Confidence 4458889999999999999999 555543 57999999 999999999543 245999999999999
Q ss_pred HHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccc
Q 004989 130 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 130 Il~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
|+.||.|||+++||||||||+||||+.++.+||+|||+++..... +
T Consensus 137 ia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~----------------------------------~ 182 (299)
T 4asz_A 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST----------------------------------D 182 (299)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG----------------------------------G
T ss_pred HHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCC----------------------------------C
Confidence 999999999999999999999999999999999988887432100 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCC
Q 004989 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s 289 (720)
. . .......||+.|||||++.+..|+
T Consensus 183 ~----------------------------------~--------------------~~~~~~~gt~~ymAPE~~~~~~~~ 208 (299)
T 4asz_A 183 Y----------------------------------Y--------------------RVGGHTMLPIRWMPPESIMYRKFT 208 (299)
T ss_dssp C----------------------------------E--------------------EETTTEEECGGGCCHHHHHHCCCC
T ss_pred c----------------------------------e--------------------eecCceecChhhcCHHHHcCCCCC
Confidence 0 0 000114689999999999999999
Q ss_pred ccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHH
Q 004989 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
.++|||||||+||||+| ||...... ..+..+..+..++......+...+|+.+||+.||++|||+.||+
T Consensus 209 ~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~ 281 (299)
T 4asz_A 209 TESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIH 281 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 99999999999999997 77665544 45555555544433323334455999999999999999999995
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=350.76 Aligned_cols=223 Identities=15% Similarity=0.194 Sum_probs=169.8
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-------
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------- 114 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~------- 114 (720)
..++++++..... ....-+..+|+.+|++++|||||++++ ++.++. .+|+|||| .+|+|.++|...
T Consensus 57 ~~VAvK~l~~~~~--~~~~~~f~~E~~il~~l~HpNIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~L~~~~~~~~~~ 130 (308)
T 4gt4_A 57 QAVAIKTLKDKAE--GPLREEFRHEAMLRARLQHPNVVCLLG-VVTKDQ---PLSMIFSYCSHGDLHEFLVMRSPHSDVG 130 (308)
T ss_dssp EEEEEEECCC-CC--C-CHHHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCSSCBHHHHHHTTCSSCCCC
T ss_pred eEEEEEEECcccC--hHHHHHHHHHHHHHHhCCCCCCCCcce-EEEECC---EEEEEEEcCCCCcHHHHHHhhCcccccc
Confidence 3455555443222 222223347888999999999999999 555443 57999999 999999999432
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccccccccc
Q 004989 115 --------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNME 186 (720)
Q Consensus 115 --------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~ 186 (720)
...+++.+++.|+.||+.||.|||+++||||||||+||||+.++.+||+|||+++.....
T Consensus 131 ~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~------------ 198 (308)
T 4gt4_A 131 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA------------ 198 (308)
T ss_dssp -----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGG------------
T ss_pred ccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCC------------
Confidence 134899999999999999999999999999999999999999999999988887432100
Q ss_pred ccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCc
Q 004989 187 TKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM 266 (720)
Q Consensus 187 ~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~ 266 (720)
+. ..
T Consensus 199 ----------------------~~------------------------------------------------------~~ 202 (308)
T 4gt4_A 199 ----------------------DY------------------------------------------------------YK 202 (308)
T ss_dssp ----------------------GC------------------------------------------------------BC
T ss_pred ----------------------Cc------------------------------------------------------ee
Confidence 00 00
Q ss_pred cccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHH
Q 004989 267 KQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFC 341 (720)
Q Consensus 267 ~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li 341 (720)
.....+||+.|||||++.+..|+.++|||||||+||||+| ||...... ..+..+..+..++.. ..+|. ..+|+
T Consensus 203 ~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~p-~~~~~~~~~li 280 (308)
T 4gt4_A 203 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVVEMIRNRQVLPCP-DDCPAWVYALM 280 (308)
T ss_dssp SSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-HHHHHHHTTCCCCCC-TTCCHHHHHHH
T ss_pred EecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCc-ccchHHHHHHH
Confidence 0011478999999999999999999999999999999997 77766544 455556655554443 34444 45999
Q ss_pred HHcCCCCCCCCCChHHHHcC
Q 004989 342 LWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~h 361 (720)
.+||+.||++|||+.||+++
T Consensus 281 ~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 281 IECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCChhHCcCHHHHHHH
Confidence 99999999999999999863
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=380.75 Aligned_cols=203 Identities=17% Similarity=0.174 Sum_probs=162.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+..+++.++|||||++++ +|++.. .+|+|||| .||+|.++|.+.+ .+++..++.|+.||+.||+|||++||||
T Consensus 241 ~~l~ll~~~~HP~IV~l~~-~f~~~~---~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~gIiH 315 (689)
T 3v5w_A 241 IMLSLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVY 315 (689)
T ss_dssp HHHHHHSSSCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhhCCCCCEeEEEE-EEEECC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4456778899999999999 666654 68999999 9999999996544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||+|||+|+.....
T Consensus 316 RDLKPeNILld~~G~vKL~DFGlA~~~~~~-------------------------------------------------- 345 (689)
T 3v5w_A 316 RDLKPANILLDEHGHVRISDLGLACDFSKK-------------------------------------------------- 345 (689)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECSSC--------------------------------------------------
T ss_pred cCCchHHeEEeCCCCEEecccceeeecCCC--------------------------------------------------
Confidence 999999999999999999999888432111
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|||||++.+ ..|+.++|||||||+|||
T Consensus 346 ------------------------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYE 383 (689)
T 3v5w_A 346 ------------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383 (689)
T ss_dssp ------------------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 0011489999999999975 569999999999999999
Q ss_pred ccc---cCCCCc--hHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 304 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~--~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||.... ........+.... ..++.. .+...+||.+||++||.+|++ ++||++||||+..
T Consensus 384 mLtG~~PF~~~~~~~~~~i~~~i~~~~--~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 384 LLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp HHHSSCTTCGGGCCCHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred HHhCCCCCCCCChHHHHHHHHhhcCCC--CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 999 665422 2223333333222 122223 345569999999999999998 7999999999986
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=346.43 Aligned_cols=205 Identities=15% Similarity=0.139 Sum_probs=159.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------CCCCHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIF 127 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------~~l~~~~~~~i~ 127 (720)
+..+|+.+|++++|||||++++ ++.+.. .+|+|||| .+|+|.++|.+.. .++++.+++.|+
T Consensus 89 ~f~~E~~il~~l~HpnIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 164 (329)
T 4aoj_A 89 DFQREAELLTMLQHQHIVRFFG-VCTEGR---PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164 (329)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH
Confidence 4458889999999999999999 555443 57999999 9999999995432 358999999999
Q ss_pred HHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccc
Q 004989 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||+++||||||||+||||+.++.+||+|||+++......
T Consensus 165 ~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~-------------------------------- 212 (329)
T 4aoj_A 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-------------------------------- 212 (329)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------------------
T ss_pred HHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCC--------------------------------
Confidence 999999999999999999999999999999999999888875321110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC
Q 004989 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. .......+||+.|||||++.+..
T Consensus 213 --~------------------------------------------------------~~~~~~~~gt~~ymAPE~~~~~~ 236 (329)
T 4aoj_A 213 --Y------------------------------------------------------YRVGGRTMLPIRWMPPESILYRK 236 (329)
T ss_dssp ---------------------------------------------------------------CCCCGGGCCHHHHTTCC
T ss_pred --c------------------------------------------------------ceecCcccccccccChhhhcCCC
Confidence 0 00001147899999999999999
Q ss_pred CCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+.++|||||||+||||+| ||...... ..+..+..+..++......+...+|+.+||+.||++|||+.||++
T Consensus 237 ~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 237 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-EAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred CCccccccchHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9999999999999999997 77665544 444555554433332233344559999999999999999999986
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=369.46 Aligned_cols=209 Identities=17% Similarity=0.262 Sum_probs=171.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|+.++|||||++++ ++++.. .+|++||| .||+|.++|......+++.+++.|++||+.||.|||++||+
T Consensus 202 ~~Ei~il~~l~hpnIv~l~~-~~~~~~---~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~ii 277 (573)
T 3uto_A 202 RKEIQTMSVLRHPTLVNLHD-AFEDDN---EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 277 (573)
T ss_dssp HHHHHHHHHTCCTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 37888999999999999999 666554 68999999 89999999965555699999999999999999999999999
Q ss_pred eccCCCCcEEEccC--CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 144 VHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++.+ +.+||+|||+++......
T Consensus 278 HRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~---------------------------------------------- 311 (573)
T 3uto_A 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---------------------------------------------- 311 (573)
T ss_dssp CCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS----------------------------------------------
T ss_pred eccCChhhccccCCCCCCEEEeeccceeEccCCC----------------------------------------------
Confidence 99999999999854 899999888874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||++|||||++.+..|+.++|||||||+|
T Consensus 312 ---------------------------------------------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvil 346 (573)
T 3uto_A 312 ---------------------------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 346 (573)
T ss_dssp ---------------------------------------------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHH
Confidence 00124799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||++ ||...... ..+..+.... +++.....++ ...+||.+||++||.+|||+.|+|+||||+....
T Consensus 347 yeml~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 347 YILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHHCCCCCCCcCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 99999 77765554 4444554432 3344444444 4459999999999999999999999999997644
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=342.93 Aligned_cols=228 Identities=12% Similarity=0.104 Sum_probs=162.8
Q ss_pred CCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCC
Q 004989 41 NPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVD 119 (720)
Q Consensus 41 ~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~ 119 (720)
+...++++++... ....+..++|...+.+++|||||++++++..+......+|+|||| .+|+|.++|++. +++
T Consensus 25 ~g~~VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~ 98 (303)
T 3hmm_A 25 RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVT 98 (303)
T ss_dssp TTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBC
T ss_pred CCEEEEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC--CCC
Confidence 3344555554321 233445567888889999999999999555544444468999999 899999999654 389
Q ss_pred HHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCC
Q 004989 120 VYECLHIFRQIVEIVYAAHSQ--------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLS 191 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~--------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~ 191 (720)
+..+..|+.||+.||.|||++ |||||||||+||||+.++++||+|||+++......
T Consensus 99 ~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~---------------- 162 (303)
T 3hmm_A 99 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT---------------- 162 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC----------------
Confidence 999999999999999999987 99999999999999999999999888874321110
Q ss_pred CCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccc
Q 004989 192 SPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILL 271 (720)
Q Consensus 192 ~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 271 (720)
+. ........
T Consensus 163 -----------------~~-----------------------------------------------------~~~~~~~~ 172 (303)
T 3hmm_A 163 -----------------DT-----------------------------------------------------IDIAPNHR 172 (303)
T ss_dssp -----------------TE-----------------------------------------------------ESCC----
T ss_pred -----------------Cc-----------------------------------------------------eeeecccc
Confidence 00 00001125
Q ss_pred ccCCcccCcccccCC------CCCccccchhhhchhhhccc---cCC----------CC----chHHHHHHHhhcCCCCc
Q 004989 272 METNWYASPEELAGA------PVSCASDIYRLGVLLFELFC---PFS----------TG----EEKTRTMSSLRHRVLPP 328 (720)
Q Consensus 272 ~GT~~Y~APE~l~~~------~~s~~sDIwSLGvll~eLlt---pf~----------~~----~~~~~~~~~l~~~~~p~ 328 (720)
+||++|||||++.+. .|+.++|||||||+||||+| ||. .. .........+....+.|
T Consensus 173 ~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp 252 (303)
T 3hmm_A 173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 252 (303)
T ss_dssp -CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCC
T ss_pred cccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCC
Confidence 799999999999765 36789999999999999998 221 10 11223333343444433
Q ss_pred cccccC------chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 329 QLLLKF------PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 329 ~~~~~~------p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++..+ ....+|+.+||+.||++|||+.||++
T Consensus 253 ~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 253 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp CCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred CCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 333222 13358999999999999999999985
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-39 Score=345.80 Aligned_cols=208 Identities=20% Similarity=0.204 Sum_probs=165.0
Q ss_pred hchhhhhhcccCCC-CCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHH
Q 004989 63 RKHSDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l~H-pnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~ 125 (720)
+..+|..+|.+++| ||||++++++.+++. .+|+|||| .+|+|.++|++. ...+++.+++.
T Consensus 113 ~~~~E~~il~~l~hhpnIV~l~g~~~~~~~---~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 189 (353)
T 4ase_A 113 ALMSELKILIHIGHHLNVVNLLGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189 (353)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECCTTS---CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHH
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEEEEecCC---EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHH
Confidence 34478889999876 899999994434332 47999999 999999999532 23489999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
|+.||+.||.|||+++||||||||+|||++.++.+||+|||+|+......
T Consensus 190 ~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~------------------------------ 239 (353)
T 4ase_A 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------------------------------ 239 (353)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT------------------------------
T ss_pred HHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC------------------------------
Confidence 99999999999999999999999999999999999999888885432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+. .......||+.|||||++.+
T Consensus 240 ---~~-------------------------------------------------------~~~~~~~gt~~ymAPE~l~~ 261 (353)
T 4ase_A 240 ---DY-------------------------------------------------------VRKGDARLPLKWMAPETIFD 261 (353)
T ss_dssp ---TS-------------------------------------------------------EEETTEEECGGGCCHHHHHH
T ss_pred ---Cc-------------------------------------------------------eeeccccccccccCHHHHhc
Confidence 00 00112478999999999999
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..|+.++|||||||+||||+| ||............+..+..++......+...+||.+||+.||++|||+.||++|
T Consensus 262 ~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 262 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 999999999999999999997 7877654445555666554444333344555699999999999999999999975
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=325.31 Aligned_cols=226 Identities=24% Similarity=0.381 Sum_probs=177.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---------------------------------------------------
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--------------------------------------------------- 91 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--------------------------------------------------- 91 (720)
+..+|..+|++++|||||++++.+.+...
T Consensus 50 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (332)
T 3qd2_B 50 KVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129 (332)
T ss_dssp HHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------------------------------------------
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccC
Confidence 44578889999999999999995443321
Q ss_pred --CCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecC
Q 004989 92 --AIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 92 --~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
....++++||| .|++|.+++..... ..++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 130 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG 209 (332)
T 3qd2_B 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG 209 (332)
T ss_dssp --CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecC
Confidence 11247999999 89999999955332 35667799999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004989 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
++...+....... .+.
T Consensus 210 ~a~~~~~~~~~~~-----------------------------~~~----------------------------------- 225 (332)
T 3qd2_B 210 LVTAMDQDEEEQT-----------------------------VLT----------------------------------- 225 (332)
T ss_dssp TCEECSCC------------------------------------------------------------------------
T ss_pred cccccccchhhcc-----------------------------ccc-----------------------------------
Confidence 9855432210000 000
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccccCCCCchHHHHHHHhhcCCC
Q 004989 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVL 326 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~ 326 (720)
............||+.|+|||++.+..++.++|||||||++|||++|+.+..........+....+
T Consensus 226 --------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
T 3qd2_B 226 --------------PMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKF 291 (332)
T ss_dssp --------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCC
T ss_pred --------------cccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCC
Confidence 000000011247899999999999999999999999999999999999887776677777777777
Q ss_pred CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 327 PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 327 p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|.......+...+||.+||++||.+|||+.|+|+||||++
T Consensus 292 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 7777777788889999999999999999999999999986
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=323.30 Aligned_cols=208 Identities=17% Similarity=0.215 Sum_probs=166.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 60 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ 134 (328)
T 3fe3_A 60 KLFREVRIMKILNHPNIVKLFE-VIETEK---TLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKR 134 (328)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---EEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4558888999999999999999 555543 57999999 7999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.......
T Consensus 135 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 168 (328)
T 3fe3_A 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---------------------------------------------- 168 (328)
T ss_dssp CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC----------------------------------------------
T ss_pred EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC----------------------------------------------
Confidence 9999999999999999999999998873221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
.....+||++|+|||++.+..+ +.++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i 203 (328)
T 3fe3_A 169 ---------------------------------------------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 203 (328)
T ss_dssp ---------------------------------------------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCcceeCcccccCCCcCCchhhhhhhHHH
Confidence 0011478999999999998886 489999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|||++ ||...... .....+..+..+.. ....+...+|+.+||..||.+|||+.|+|+||||+...
T Consensus 204 l~ell~g~~pf~~~~~~-~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 204 LYTLVSGSLPFDGQNLK-ELRERVLRGKYRIP-FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCC-TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCC-CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 999999 77665544 33333333322211 12335556999999999999999999999999998753
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-36 Score=324.57 Aligned_cols=208 Identities=18% Similarity=0.261 Sum_probs=167.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++++.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 61 ~~~~E~~il~~l~hpnIv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 135 (361)
T 2yab_A 61 EIEREVSILRQVLHPNIITLHD-VYENRT---DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK 135 (361)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCCCcEEE-EEEeCC---EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 665543 68999999 799999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 142 IVVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 136 ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~------------------------------------------ 173 (361)
T 2yab_A 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV------------------------------------------ 173 (361)
T ss_dssp EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC------------------------------------------
T ss_pred cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC------------------------------------------
Confidence 99999999999998776 79999888874321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.....+||+.|+|||++.+..++.++|||||
T Consensus 174 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 204 (361)
T 2yab_A 174 -------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204 (361)
T ss_dssp -------------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------ccccCCCCccEECchHHcCCCCCccccHHHH
Confidence 0011468999999999999889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||...... ..+..+.... +++......+. ..+||.+||.+||.+|||+.|+|+||||+..
T Consensus 205 Gvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 205 GVITYILLSGASPFLGDTKQ-ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp HHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred HHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 999999999 67665443 3444444332 34444444444 4599999999999999999999999999875
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-36 Score=313.85 Aligned_cols=211 Identities=16% Similarity=0.205 Sum_probs=163.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.++. .+++||||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 47 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i 122 (292)
T 3o0g_A 47 SALREICLLKELKHKNIVRLHD-VLHSDK---KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122 (292)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCCEeeEEe-EEEeCC---EEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 4457888999999999999999 555443 689999997778888886655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+.+..
T Consensus 123 vH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 156 (292)
T 3o0g_A 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVR---------------------------------------------- 156 (292)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS----------------------------------------------
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccceecCCccc----------------------------------------------
Confidence 9999999999999999999999998844321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 157 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 192 (292)
T 3o0g_A 157 --------------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 192 (292)
T ss_dssp --------------------------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHH
Confidence 001146799999999998776 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCcc-------------------------c-cccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQ-------------------------L-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~-------------------------~-~~~~p~~~~Li~~~L~~dP~ 350 (720)
|||++ ||............+.. +..++. . ....+...+||.+||++||+
T Consensus 193 ~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 272 (292)
T 3o0g_A 193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPV 272 (292)
T ss_dssp HHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGG
T ss_pred HHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChh
Confidence 99997 54444333333333221 000000 0 11223445999999999999
Q ss_pred CCCChHHHHcCcccCCC
Q 004989 351 GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~ 367 (720)
+|||++|+|+||||+..
T Consensus 273 ~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 273 QRISAEEALQHPYFSDF 289 (292)
T ss_dssp GSCCHHHHHTSGGGTTC
T ss_pred hCCCHHHHhcCcccccC
Confidence 99999999999999875
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=315.18 Aligned_cols=210 Identities=15% Similarity=0.186 Sum_probs=168.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++..+. .+|+|||| .|++|.+++... .+++.+++.++.||+.||.|||++||
T Consensus 64 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i 137 (297)
T 3fxz_A 64 IINEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQV 137 (297)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhcCCCCCCCeEeE-EEEECC---EEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 346778999999999999999 554443 57999999 899999999654 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++........
T Consensus 138 ~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 171 (297)
T 3fxz_A 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---------------------------------------------- 171 (297)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC----------------------------------------------
T ss_pred eeCCCCHHHEEECCCCCEEEeeCCCceecCCccc----------------------------------------------
Confidence 9999999999999999999999998743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 172 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 207 (297)
T 3fxz_A 172 --------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 207 (297)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHH
Confidence 001147899999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++ ||..........................+. ..+||.+||++||.+|||+.|+|+||||+....
T Consensus 208 ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 208 EMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 9999 776665554444433333333333334444 459999999999999999999999999997643
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-36 Score=319.26 Aligned_cols=208 Identities=22% Similarity=0.288 Sum_probs=164.9
Q ss_pred hchhhhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|...+.. .+||||+++++ ++.++. .+|+||||.+++|.+++...+..+++..++.|+.||+.||.|||++|
T Consensus 102 ~~~~e~~~~~~~~~h~~iv~l~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 177 (311)
T 3p1a_A 102 RKLAEVGSHEKVGQHPCCVRLEQ-AWEEGG---ILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177 (311)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCcEEEEEE-EEEeCC---EEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 44445444444 48999999999 555443 68999999888999999665666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...+...
T Consensus 178 ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 211 (311)
T 3p1a_A 178 LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG---------------------------------------------- 211 (311)
T ss_dssp EECCCCSGGGEEECGGGCEEECCCTTCEECC-------------------------------------------------
T ss_pred EecCCCCHHHEEECCCCCEEEccceeeeecccCC----------------------------------------------
Confidence 9999999999999999999999998874322110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+ .++.++|||||||++
T Consensus 212 ---------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il 245 (311)
T 3p1a_A 212 ---------------------------------------------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTI 245 (311)
T ss_dssp ------------------------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHH
T ss_pred ---------------------------------------------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHH
Confidence 0011368999999999987 599999999999999
Q ss_pred hhccccCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||+++....... .....+.....++.+....+.. .+||.+||++||.+|||+.|+|+||||+++
T Consensus 246 ~el~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~p 311 (311)
T 3p1a_A 246 LEVACNMELPHGG-EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311 (311)
T ss_dssp HHHHHTCCCCSSH-HHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSCC
T ss_pred HHHHhCCCCCCCc-cHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccCC
Confidence 9999943322222 2344556666676666655555 499999999999999999999999999864
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-36 Score=317.46 Aligned_cols=212 Identities=16% Similarity=0.212 Sum_probs=164.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.++. .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 65 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i 140 (311)
T 3niz_A 65 TAIREISLLKELHHPNIVSLID-VIHSER---CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140 (311)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECCSS---CEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHcCCCCEeeeee-EEccCC---EEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3447888999999999999999 555443 679999996679999997766679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...+....
T Consensus 141 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------- 174 (311)
T 3niz_A 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVR---------------------------------------------- 174 (311)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC----------------------------------------------
T ss_pred ccCCCchHhEEECCCCCEEEccCcCceecCCCcc----------------------------------------------
Confidence 9999999999999999999999998844321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+. .++.++|||||||++
T Consensus 175 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 210 (311)
T 3niz_A 175 --------------------------------------------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIF 210 (311)
T ss_dssp -----------------------------------------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHH
Confidence 00113679999999999874 489999999999999
Q ss_pred hhccc---cCCCCchHHH--HHHHhhcCCCCcc-------------------------c-cccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTR--TMSSLRHRVLPPQ-------------------------L-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~--~~~~l~~~~~p~~-------------------------~-~~~~p~~~~Li~~~L~~dP~ 350 (720)
|+|++ ||........ .+..+.....+.. . ....+...+||.+||++||.
T Consensus 211 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 290 (311)
T 3niz_A 211 AEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPN 290 (311)
T ss_dssp HHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTT
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChh
Confidence 99999 6765433221 1111111111111 0 11223445999999999999
Q ss_pred CCCChHHHHcCcccCCCc
Q 004989 351 GRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~ 368 (720)
+|||+.|+|+||||+...
T Consensus 291 ~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 291 KRISARDAMNHPYFKDLD 308 (311)
T ss_dssp TSCCHHHHHTSGGGTTSC
T ss_pred HCCCHHHHhcCcccccCC
Confidence 999999999999999863
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=333.95 Aligned_cols=214 Identities=18% Similarity=0.204 Sum_probs=162.1
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+..+|..+|..++|||||++++ ++.... ....+|+||||.+++|.+.+.. .+++.+++.+++||+.||+|||
T Consensus 106 ~~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH 181 (464)
T 3ttj_A 106 KRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLH 181 (464)
T ss_dssp HHHHHHHHHHHHCCCTTBCCCSE-EECSCCSTTTCCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcEEE-EEccCCccccCCeEEEEEeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH
Confidence 35558889999999999999999 554332 2346899999977788888843 3899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.+||+|||+++..+...
T Consensus 182 ~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 218 (464)
T 3ttj_A 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF------------------------------------------- 218 (464)
T ss_dssp HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC-------------------------------------------
T ss_pred HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc-------------------------------------------
Confidence 9999999999999999999999999998874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||++|+|||++.+..|+.++||||||
T Consensus 219 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 250 (464)
T 3ttj_A 219 ------------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250 (464)
T ss_dssp ------------------------------------------------CC----CCCTTCCHHHHTTCCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccCCCcccccccCHHHHcCCCCCHHHHHHHHH
Confidence 00114789999999999999999999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CCCCccc-----------------------ccc----------------Cc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQL-----------------------LLK----------------FP 335 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~-----------------------~~~----------------~p 335 (720)
|++|||++ ||.+..........+.. +..++.+ ... .+
T Consensus 251 ~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 330 (464)
T 3ttj_A 251 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 330 (464)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCH
Confidence 99999999 77665443322222211 0000000 000 12
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
...+||.+||++||.+|||++|+|+||||+...++
T Consensus 331 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~ 365 (464)
T 3ttj_A 331 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365 (464)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcChhhhhccCc
Confidence 34599999999999999999999999999976543
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=311.96 Aligned_cols=210 Identities=19% Similarity=0.248 Sum_probs=157.1
Q ss_pred hhhhhccc---CCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTH---GDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~L~~---l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+|..++.+ ++||||+++++ ++.... ....++++|||.+++|.+++.... ..+++.+++.++.||+.||.|||+
T Consensus 60 ~e~~~l~~l~~~~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 138 (308)
T 3g33_A 60 REVALLRRLEAFEHPNVVRLMD-VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 138 (308)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEE-EEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCeEEeee-eeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44445544 55999999999 444332 223579999997789999995543 349999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+...
T Consensus 139 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 174 (308)
T 3g33_A 139 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-------------------------------------------- 174 (308)
T ss_dssp TTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC--------------------------------------------
T ss_pred CCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCc--------------------------------------------
Confidence 999999999999999999999999999874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 175 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 207 (308)
T 3g33_A 175 -----------------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 207 (308)
T ss_dssp -----------------------------------------------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHH
T ss_pred -----------------------------------------------ccCCccccccccCchHHcCCCCCchHHHHHHHH
Confidence 001146899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCCcc-----------------------ccccC-chHHHHHHHcCCCCCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ-----------------------LLLKF-PKEASFCLWLLHPEPSG 351 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~-----------------------~~~~~-p~~~~Li~~~L~~dP~~ 351 (720)
++|||++ ||............+.. +..++. ..... +...+||.+||++||.+
T Consensus 208 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 287 (308)
T 3g33_A 208 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 287 (308)
T ss_dssp HHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCcc
Confidence 9999999 66665544332222211 111100 11122 33459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004989 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||+..
T Consensus 288 R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 288 RISAFRALQHSYLHKD 303 (308)
T ss_dssp SCCHHHHHTSTTC---
T ss_pred CCCHHHHhcCccccCC
Confidence 9999999999999975
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=310.93 Aligned_cols=211 Identities=17% Similarity=0.240 Sum_probs=161.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.... .+|+||||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 46 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (288)
T 1ob3_A 46 TTIREISILKELKHSNIVKLYD-VIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121 (288)
T ss_dssp HHHHHHHGGGGCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHhcCCCCEeeeee-EEccCC---eEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3347888999999999999999 555443 689999996679999997665669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+....
T Consensus 122 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 155 (288)
T 1ob3_A 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVR---------------------------------------------- 155 (288)
T ss_dssp CCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------------------------------------------------
T ss_pred ecCCCCHHHEEEcCCCCEEEeECccccccCcccc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 191 (288)
T 1ob3_A 156 --------------------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF 191 (288)
T ss_dssp --------------------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccccccccCchheeCCCCCCcHHHHHHHHHHH
Confidence 001136799999999997654 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCC-------------Cc-----------cccccCc-hHHHHHHHcCCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RVL-------------PP-----------QLLLKFP-KEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~-------------p~-----------~~~~~~p-~~~~Li~~~L~~dP~~ 351 (720)
|||++ ||............... ... .+ .+....+ ...+||.+||++||++
T Consensus 192 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 271 (288)
T 1ob3_A 192 AEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQ 271 (288)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCccc
Confidence 99999 67665444333222211 000 00 0111223 3459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004989 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||++.
T Consensus 272 Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 272 RITAKQALEHAYFKEN 287 (288)
T ss_dssp SCCHHHHHTSGGGGC-
T ss_pred CCCHHHHhcCcchhhc
Confidence 9999999999999863
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=316.31 Aligned_cols=202 Identities=14% Similarity=0.182 Sum_probs=164.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 54 ~~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 128 (318)
T 1fot_A 54 NDERLMLSIVTHPFIIRMWG-TFQDAQ---QIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDII 128 (318)
T ss_dssp HHHHHHHHSCCBTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHhhCCCCCCceEeE-EEEeCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36777899999999999999 555543 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||++......
T Consensus 129 HrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~------------------------------------------------- 159 (318)
T 1fot_A 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDV------------------------------------------------- 159 (318)
T ss_dssp CCCCCGGGEEECTTSCEEECCCSSCEECSSC-------------------------------------------------
T ss_pred ccCCChheEEEcCCCCEEEeecCcceecCCc-------------------------------------------------
Confidence 9999999999999999999998887321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||+.|+|||++.+..++.++|||||||++||
T Consensus 160 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 195 (318)
T 1fot_A 160 --------------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYE 195 (318)
T ss_dssp --------------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHH
Confidence 001478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+. ++.. .+...+||.+||..||.+|| +++++++||||+..
T Consensus 196 ll~g~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 196 MLAGYTPFYDSNTM-KTYEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp HHHSSCTTCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 999 67665444 333333333221 1122 34456999999999999999 89999999999976
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=321.44 Aligned_cols=213 Identities=16% Similarity=0.251 Sum_probs=165.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...+|+||||.|++|.+++... .+++..++.++.||+.||.|||+
T Consensus 70 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~ 146 (367)
T 1cm8_A 70 RAYRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHA 146 (367)
T ss_dssp HHHHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCCcee-eEecCCccccCceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4558899999999999999999 5544322 2457999999999999999653 49999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+..
T Consensus 147 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--------------------------------------------- 181 (367)
T 1cm8_A 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--------------------------------------------- 181 (367)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---------------------------------------------
T ss_pred CCccccCcCHHHEEEcCCCCEEEEeeecccccccc---------------------------------------------
Confidence 99999999999999999999999998887432110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
....+||++|+|||++.+ ..++.++||||||
T Consensus 182 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 213 (367)
T 1cm8_A 182 ------------------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 213 (367)
T ss_dssp ------------------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred ------------------------------------------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHH
Confidence 011468999999999987 5699999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CCCCc----------------------------cccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP----------------------------QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~----------------------------~~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||.+..........+.. +..+. .+....+...+|+.+||+
T Consensus 214 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~ 293 (367)
T 1cm8_A 214 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 293 (367)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHcc
Confidence 99999999 67665443222222111 11111 111223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
.||.+|||+.|+|+||||+...+..
T Consensus 294 ~dP~~R~t~~e~l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 294 LDAEQRVTAGEALAHPYFESLHDTE 318 (367)
T ss_dssp SSTTTSCCHHHHHHSGGGTTTC---
T ss_pred CChhHCCCHHHHhcChHHHhhcCCc
Confidence 9999999999999999999875543
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=325.08 Aligned_cols=237 Identities=16% Similarity=0.195 Sum_probs=167.6
Q ss_pred hhhchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+..+|..+|.++. |||||++++ ++.... ...+|+||||.+++|.+++... .+++..++.++.||+.||.|||+
T Consensus 52 ~~~~~~E~~~l~~l~~h~niv~l~~-~~~~~~-~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~ 127 (388)
T 3oz6_A 52 AQRTFREIMILTELSGHENIVNLLN-VLRADN-DRDVYLVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHS 127 (388)
T ss_dssp HHHHHHHHHHHHHTTTCTTBCCEEE-EEECTT-SSCEEEEEECCSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCCeeee-EEecCC-CCEEEEEecccCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence 345558888999997 999999999 554332 2368999999778999999653 49999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++.......... ..
T Consensus 128 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-----------------------------~~--------- 169 (388)
T 3oz6_A 128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN-----------------------------NI--------- 169 (388)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC-----------------------------CG---------
T ss_pred CCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccc-----------------------------cc---------
Confidence 9999999999999999999999999999865422110000 00
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
+.......... ..........+||++|+|||++.+ ..|+.++||||||
T Consensus 170 -----------------~~~~~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG 218 (388)
T 3oz6_A 170 -----------------PLSINENTENF--------------DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLG 218 (388)
T ss_dssp -----------------GGCCC-----------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHH
T ss_pred -----------------ccccccccccc--------------ccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHH
Confidence 00000000000 000001123589999999999987 4589999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCcc--------------------------------c-------------
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--------------------------------L------------- 330 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~--------------------------------~------------- 330 (720)
|++|||++ ||.+..........+.....|+. +
T Consensus 219 ~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (388)
T 3oz6_A 219 CILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPK 298 (388)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTT
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhccccccc
Confidence 99999999 67665544332222211111110 0
Q ss_pred cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 331 ~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
....+...+||.+||.+||.+|||+.|+|+||||+....+
T Consensus 299 ~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~ 338 (388)
T 3oz6_A 299 ADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP 338 (388)
T ss_dssp CCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCG
T ss_pred ccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCC
Confidence 0223455699999999999999999999999999876554
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=314.38 Aligned_cols=208 Identities=18% Similarity=0.267 Sum_probs=166.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 60 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ 134 (326)
T 2y0a_A 60 DIEREVSILKEIQHPNVITLHE-VYENKT---DVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134 (326)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 57999999 799999999544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 142 IVVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 135 ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------ 172 (326)
T 2y0a_A 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN------------------------------------------ 172 (326)
T ss_dssp EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS------------------------------------------
T ss_pred eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC------------------------------------------
Confidence 99999999999999877 79999888874321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 173 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 203 (326)
T 2y0a_A 173 -------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203 (326)
T ss_dssp -------------------------------------------------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------ccccccCCcCcCCceeecCCCCCcHHHHHHH
Confidence 0011468999999999998889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc--CCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||...... .....+.. ..+++......+. ..+||.+||.+||.+|||+.|+|+||||...
T Consensus 204 G~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 204 GVITYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHHHHSCCSSCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HHHHHHHHHCcCCCCCCCHH-HHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 999999999 67655443 33333332 2233333334444 4599999999999999999999999999875
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=317.90 Aligned_cols=209 Identities=19% Similarity=0.252 Sum_probs=168.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++||||+++++ ++++.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 48 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gi 123 (321)
T 1tki_A 48 VKKEISILNIARHRNILHLHE-SFESME---ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI 123 (321)
T ss_dssp HHHHHHHHHHSCCTTBCCEEE-EEEETT---EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCeEeE-EEecCC---EEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 347888999999999999999 555543 68999999 8899999997666669999999999999999999999999
Q ss_pred eeccCCCCcEEEcc--CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 143 VVHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 143 vHrDLKP~NILl~~--~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+||||||+|||++. ++.+||+|||++.......
T Consensus 124 vH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 158 (321)
T 1tki_A 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--------------------------------------------- 158 (321)
T ss_dssp ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---------------------------------------------
T ss_pred CcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC---------------------------------------------
Confidence 99999999999986 7899999888874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 159 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 192 (321)
T 1tki_A 159 ----------------------------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTL 192 (321)
T ss_dssp ----------------------------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHH
Confidence 0011468999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCC--CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|+|++ ||...... ..+..+..... ++......+ ...+|+.+||++||.+|||+.|+|+||||+...
T Consensus 193 l~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 193 VYVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHHhCCCCCcCCCHH-HHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 999999 67665544 33444443332 222333344 445999999999999999999999999998763
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=316.47 Aligned_cols=207 Identities=18% Similarity=0.262 Sum_probs=165.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 51 ~~~~E~~~l~~l~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 125 (337)
T 1o6l_A 51 HTVTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRD 125 (337)
T ss_dssp HHHHHHHHHHSCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446778899999999999999 555543 68999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|++||+|||+++.......
T Consensus 126 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--------------------------------------------- 160 (337)
T 1o6l_A 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--------------------------------------------- 160 (337)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC---------------------------------------------
T ss_pred eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 161 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 195 (337)
T 1o6l_A 161 ---------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195 (337)
T ss_dssp ---------------------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHH
T ss_pred ---------------------------------------------cccccccChhhCChhhhcCCCCCchhhcccchhHH
Confidence 00114789999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+....+. ++.. .+...+||.+||+.||.+|| ++.|+++||||...
T Consensus 196 ~ell~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 196 YEMMCGRLPFYNQDHE-RLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHhcCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 99999 77665443 333333332211 1222 34556999999999999999 89999999999876
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=319.84 Aligned_cols=208 Identities=19% Similarity=0.221 Sum_probs=165.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 74 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ 148 (362)
T 2bdw_A 74 KLEREARICRKLQHPNIVRLHD-SIQEES---FHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG 148 (362)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 555543 57999999 889999999554 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 149 ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~------------------------------------------- 185 (362)
T 2bdw_A 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE------------------------------------------- 185 (362)
T ss_dssp CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC-------------------------------------------
T ss_pred eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc-------------------------------------------
Confidence 99999999999998654 59999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 217 (362)
T 2bdw_A 186 ------------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 217 (362)
T ss_dssp ------------------------------------------------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccCHHHHccCCCCchhhHHHHH
Confidence 00114689999999999998899999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCC--CCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+. ++...... .+...+||.+||++||.+|||+.++|+||||...
T Consensus 218 ~il~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 218 VILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 99999999 66655443 3444444332 23333333 3445599999999999999999999999999763
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=330.58 Aligned_cols=244 Identities=15% Similarity=0.194 Sum_probs=163.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++++.... .....+|+||||.+++|.+++.... .+++..++.|++||+.||.|||++|
T Consensus 98 ~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ 176 (458)
T 3rp9_A 98 RILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSAG 176 (458)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4558899999999999999999443322 3335689999998899999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.++.+||+|||+++..+.......... .........+.+|+...
T Consensus 177 iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~------- 234 (458)
T 3rp9_A 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLP---------------ISPREDDMNLVTFPHTK------- 234 (458)
T ss_dssp CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------------------
T ss_pred cCCCCCChhhEEECCCCCEeecccccchhccCccccccccc---------------cCccccccccccccccc-------
Confidence 99999999999999999999999999976543311100000 00000000000110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-CCCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDIwSLGvl 300 (720)
......+..+||++|+|||++. +..|+.++|||||||+
T Consensus 235 -----------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~i 273 (458)
T 3rp9_A 235 -----------------------------------------NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273 (458)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHH
Confidence 0000112368999999999864 5559999999999999
Q ss_pred hhhccc--------------cCCCCch-------------------HHHHHHHhhc--C--------------------C
Q 004989 301 LFELFC--------------PFSTGEE-------------------KTRTMSSLRH--R--------------------V 325 (720)
Q Consensus 301 l~eLlt--------------pf~~~~~-------------------~~~~~~~l~~--~--------------------~ 325 (720)
||||++ +|.+... ....+..+.. + .
T Consensus 274 l~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~ 353 (458)
T 3rp9_A 274 FAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI 353 (458)
T ss_dssp HHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTT
T ss_pred HHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHh
Confidence 999996 1222110 0000000000 0 0
Q ss_pred C--------CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 326 L--------PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 326 ~--------p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+ ...+....+...+||.+||.+||.+|||++|+|+||||+.....
T Consensus 354 ~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~ 406 (458)
T 3rp9_A 354 FPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406 (458)
T ss_dssp SCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred cCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence 0 01112234455699999999999999999999999999987554
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=324.01 Aligned_cols=205 Identities=17% Similarity=0.280 Sum_probs=162.7
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|..+ +||||+++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++.+++.|+.||+.||.|||++||
T Consensus 71 ~~E~~il~~~~~hp~Iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gi 145 (353)
T 3txo_A 71 MTEKRILSLARNHPFLTQLFC-CFQTPD---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGI 145 (353)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhccCCCceeeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3666778776 7999999999 565554 58999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||+++......
T Consensus 146 vHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~----------------------------------------------- 178 (353)
T 3txo_A 146 IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----------------------------------------------- 178 (353)
T ss_dssp BCCCCCGGGEEECTTSCEEECCCTTCBCSCC-------------------------------------------------
T ss_pred cccCCCHHHEEECCCCCEEEccccceeecccCC-----------------------------------------------
Confidence 999999999999999999999999874321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+||+.|+|||++.+..|+.++|||||||++|
T Consensus 179 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 215 (353)
T 3txo_A 179 -------------------------------------------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLY 215 (353)
T ss_dssp --------------------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHH
Confidence 0001147899999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+....+ .|. ...+...+||.+||.+||.+||++ .|+++||||+..
T Consensus 216 ell~G~~Pf~~~~~~-~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 216 EMLCGHAPFEAENED-DLFEAILNDEVVYPT--WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 9999 77765554 34444443322 121 123455699999999999999998 899999999986
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-35 Score=306.48 Aligned_cols=211 Identities=14% Similarity=0.148 Sum_probs=171.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.+.........+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 71 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ 149 (290)
T 1t4h_A 71 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 4457888999999999999999444444444568999999 789999999553 34899999999999999999999999
Q ss_pred --ceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 --IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 --IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++ .++.+||+|||.+......
T Consensus 150 ~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------- 185 (290)
T 1t4h_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------- 185 (290)
T ss_dssp SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------
T ss_pred CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc--------------------------------------------
Confidence 99999999999998 7899999998887321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG 216 (290)
T 1t4h_A 186 ------------------------------------------------FAKAVIGTPEFMAPEMYEEK-YDESVDVYAFG 216 (290)
T ss_dssp ------------------------------------------------SBEESCSSCCCCCGGGGGTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCcCCHHHHhcc-CCCcchHHHHH
Confidence 00114689999999998754 89999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||............+.....+..+....+ ...+||.+||+.||.+|||+.|+|+||||++.
T Consensus 217 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 217 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 99999999 77776666666666766666666655554 45699999999999999999999999999864
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-35 Score=318.23 Aligned_cols=203 Identities=13% Similarity=0.123 Sum_probs=165.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 88 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 162 (350)
T 1rdq_E 88 TLNEKRILQAVNFPFLVKLEF-SFKDNS---NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDL 162 (350)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346788999999999999999 555543 68999999 8999999996543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|.+||+|||++......
T Consensus 163 vHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------------------------------------------------ 194 (350)
T 1rdq_E 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------------------------------ 194 (350)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECSSC------------------------------------------------
T ss_pred ccccCccceEEECCCCCEEEcccccceeccCC------------------------------------------------
Confidence 99999999999999999999998887322100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
....+||+.|+|||++.+..++.++|||||||++|
T Consensus 195 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 229 (350)
T 1rdq_E 195 ---------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIY 229 (350)
T ss_dssp ---------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCccccCHHHhcCCCCCCcCCEecccHhHh
Confidence 01147899999999999989999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+....++ ++..+ +...+||.+||+.||.+||+ +.||++||||...
T Consensus 230 ell~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 230 EMAAGYPPFFADQPI-QIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHhhCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 9999 67665443 444444443221 22233 44559999999999999998 9999999999875
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=317.99 Aligned_cols=229 Identities=16% Similarity=0.151 Sum_probs=174.0
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHH
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 121 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~ 121 (720)
.+.++++++............+..+|..+|.+++|||||++++ ++.... ..|+||||..++|.+++......+++.
T Consensus 79 ~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~g~l~~~l~~~~~~l~~~ 154 (348)
T 1u5q_A 79 SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEV 154 (348)
T ss_dssp TEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHHTSCCCHH
T ss_pred CeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEE-EEEECC---eEEEEEecCCCCHHHHHHHhcCCCCHH
Confidence 3344444443333222222234457888999999999999999 554443 679999996689999885545569999
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 155 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--------------------------- 207 (348)
T 1u5q_A 155 EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--------------------------- 207 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---------------------------
Confidence 99999999999999999999999999999999999999999988887332100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
....||+.|+|||
T Consensus 208 -------------------------------------------------------------------~~~~gt~~y~aPE 220 (348)
T 1u5q_A 208 -------------------------------------------------------------------NSFVGTPYWMAPE 220 (348)
T ss_dssp -------------------------------------------------------------------CCCCSCGGGCCHH
T ss_pred -------------------------------------------------------------------CcccCCcceeCHh
Confidence 0136899999999
Q ss_pred ccc---CCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCC
Q 004989 282 ELA---GAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 282 ~l~---~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpt 354 (720)
++. +..++.++|||||||++|||++ ||.......... .+.....+......++.. .+||.+||+.||.+|||
T Consensus 221 ~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps 299 (348)
T 1u5q_A 221 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 299 (348)
T ss_dssp HHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcC
Confidence 985 4558999999999999999999 666655443333 333333333333444544 59999999999999999
Q ss_pred hHHHHcCcccCCCcc
Q 004989 355 MGELLQSEFLNEPRD 369 (720)
Q Consensus 355 a~eiL~hp~~~~~~~ 369 (720)
+.++|+||||.....
T Consensus 300 ~~~ll~h~~~~~~~~ 314 (348)
T 1u5q_A 300 SEVLLKHRFVLRERP 314 (348)
T ss_dssp HHHHTTCHHHHSCCC
T ss_pred HHHHhhChhhhccCC
Confidence 999999999987643
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=313.14 Aligned_cols=221 Identities=14% Similarity=0.215 Sum_probs=166.8
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCC-----CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAA-----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~-----~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+..+|..+|..++||||+++++ ++..... ...+|+||||.+++|.+.+......+++.+++.++.||+.||.|
T Consensus 61 ~~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 139 (351)
T 3mi9_A 61 ITALREIKILQLLKHENVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139 (351)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcccHhh-eeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 34457888999999999999999 5544321 34689999997779999997766679999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+||||||+|||++.++.+||+|||++.........
T Consensus 140 LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------------- 180 (351)
T 3mi9_A 140 IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS--------------------------------------- 180 (351)
T ss_dssp HHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSS---------------------------------------
T ss_pred HHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccc---------------------------------------
Confidence 99999999999999999999999999999988543221000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccch
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIw 295 (720)
.+.......||+.|+|||++.+. .++.++|||
T Consensus 181 -----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw 213 (351)
T 3mi9_A 181 -----------------------------------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLW 213 (351)
T ss_dssp -----------------------------------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHH
T ss_pred -----------------------------------------------cccccCCcccccCccCchhhcCCCCCCcHhHHH
Confidence 00000124789999999999874 489999999
Q ss_pred hhhchhhhccc---cCCCCchHHHH--HHHhhcCCCCcccccc-----------------------------CchHHHHH
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRT--MSSLRHRVLPPQLLLK-----------------------------FPKEASFC 341 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~--~~~l~~~~~p~~~~~~-----------------------------~p~~~~Li 341 (720)
||||++|||++ ||......... +..+. +.+++..... .+...+||
T Consensus 214 slG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 292 (351)
T 3mi9_A 214 GAGCIMAEMWTRSPIMQGNTEQHQLALISQLC-GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI 292 (351)
T ss_dssp HHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHH
Confidence 99999999999 66654433222 11222 2222221111 23456999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+||++||.+|||+.|+|+||||.....+
T Consensus 293 ~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 321 (351)
T 3mi9_A 293 DKLLVLDPAQRIDSDDALNHDFFWSDPMP 321 (351)
T ss_dssp HHHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred HHHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence 99999999999999999999999876443
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=328.90 Aligned_cols=209 Identities=15% Similarity=0.196 Sum_probs=166.7
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.++|.+....+++..++.|+.||+.||.|||++||||
T Consensus 123 ~E~~il~~~~hp~Iv~l~~-~~~~~~---~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiH 198 (437)
T 4aw2_A 123 EERDVLVNGDSKWITTLHY-AFQDDN---NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198 (437)
T ss_dssp HHHHHHHHSCTTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEEEEEE-EEeeCC---EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 5666888899999999999 665554 57999999 899999999775566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.++++||+|||+++.......
T Consensus 199 rDLKp~NILl~~~g~vkL~DFGla~~~~~~~~------------------------------------------------ 230 (437)
T 4aw2_A 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGT------------------------------------------------ 230 (437)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSC------------------------------------------------
T ss_pred cccCHHHeeEcCCCCEEEcchhhhhhcccCCC------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
......+||++|+|||++. ...|+.++|||||||
T Consensus 231 -----------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGv 269 (437)
T 4aw2_A 231 -----------------------------------------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGV 269 (437)
T ss_dssp -----------------------------------------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHH
Confidence 0001147999999999997 455899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh---cCCCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLR---HRVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~---~~~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||............+. ...+|.......+...+||.+||..+|.+ ||+++|+++||||+..
T Consensus 270 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 270 CMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp HHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 9999999 7766554432222222 22344443344556669999999998888 9999999999999986
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-35 Score=324.85 Aligned_cols=208 Identities=18% Similarity=0.230 Sum_probs=166.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.++..++.||+.||.|||++|
T Consensus 56 ~~~~E~~il~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~g 130 (444)
T 3soa_A 56 KLEREARICRLLKHPNIVRLHD-SISEEG---HHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMG 130 (444)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-EEECSS---EEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCCCeEEE-EEEECC---EEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4458888999999999999999 555543 67999999 8999999995544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++ .++.+||+|||++........
T Consensus 131 ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~------------------------------------------ 168 (444)
T 3soa_A 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ------------------------------------------ 168 (444)
T ss_dssp CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC------------------------------------------
T ss_pred ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc------------------------------------------
Confidence 99999999999998 457899999988743321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..|+.++||||||
T Consensus 169 ------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlG 200 (444)
T 3soa_A 169 ------------------------------------------------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG 200 (444)
T ss_dssp ------------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------eeecccCCcccCCHHHhcCCCCCCccccHHHH
Confidence 00114789999999999998899999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCC--CCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|++|+|++ ||...... .....+..+. ++.... ...+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 201 vilyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~ 273 (444)
T 3soa_A 201 VILYILLVGYPPFWDEDQH-RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273 (444)
T ss_dssp HHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred HHHHHHHhCCCCCCCccHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence 99999999 66554443 4444444433 222222 33445569999999999999999999999999975
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=321.74 Aligned_cols=207 Identities=16% Similarity=0.212 Sum_probs=163.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.|+.||+.||.|||++|
T Consensus 61 ~~~~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~g 135 (384)
T 4fr4_A 61 NVFKELQIMQGLEHPFLVNLWY-SFQDEE---DMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQR 135 (384)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 565543 57999999 8999999996543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|++||+|||++.......
T Consensus 136 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------------------------------------- 169 (384)
T 4fr4_A 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---------------------------------------------- 169 (384)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC----------------------------------------------
T ss_pred ceeccCcHHHeEECCCCCEEEeccceeeeccCCC----------------------------------------------
Confidence 9999999999999999999999998874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccccchhhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+ ..|+.++||||||
T Consensus 170 ---------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG 204 (384)
T 4fr4_A 170 ---------------------------------------------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLG 204 (384)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHH
T ss_pred ---------------------------------------------ceeccCCCccccCCeeeccCCCCCCCccceeechH
Confidence 0011478999999999974 3489999999999
Q ss_pred chhhhccc---cCCCC--chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-hHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTG--EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~--~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-a~eiL~hp~~~~~ 367 (720)
|++|||++ ||... .........+..... .++..+ +...+||.+||++||.+||+ +.++++||||...
T Consensus 205 ~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 205 VTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV--TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp HHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred HHHHHHHhCCCCCCCCCCccHHHHHHHHhhccc--CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 99999999 67532 222233333333221 122233 44559999999999999998 8999999999986
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=321.80 Aligned_cols=206 Identities=17% Similarity=0.209 Sum_probs=161.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|..++||||+++++ ++.... .+|+||||.+++|.+++...+ .+++.+++.++.||+.||.|||++||
T Consensus 55 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~gi 129 (336)
T 3h4j_B 55 RVEREISYLKLLRHPHIIKLYD-VITTPT---DIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKI 129 (336)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEECCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4557888999999999999999 555543 579999998899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...... .+
T Consensus 130 vH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~----------------------------------~~------------ 163 (336)
T 3h4j_B 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDG----------------------------------NF------------ 163 (336)
T ss_dssp CCCCCSTTTEEECTTCCEEECCSSCTBTTTTS----------------------------------BT------------
T ss_pred EecCCchhhEEEcCCCCEEEEEeccceeccCC----------------------------------cc------------
Confidence 99999999999999999999999887432110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
....+||+.|+|||++.+..+ ++++|||||||++
T Consensus 164 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il 198 (336)
T 3h4j_B 164 ---------------------------------------------LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198 (336)
T ss_dssp ---------------------------------------------TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHH
Confidence 011468999999999988875 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+.... ..++.. .+...+||.+||.+||.+|||+.|+++||||+..
T Consensus 199 ~~ll~g~~Pf~~~~~~-~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 199 YVMLVGRLPFDDEFIP-NLFKKVNSCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHHHSSCSSBCSSST-TCBCCCCSSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHhCCCCCCCccHH-HHHHHHHcCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 99999 66543221 1111111111 112222 3445599999999999999999999999999865
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=320.90 Aligned_cols=205 Identities=18% Similarity=0.252 Sum_probs=163.3
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|..+ +||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||.|||++||
T Consensus 65 ~~E~~il~~~~~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 139 (345)
T 1xjd_A 65 MVEKRVLSLAWEHPFLTHMFC-TFQTKE---NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGI 139 (345)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCCCcEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3555667664 8999999999 565543 58999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||+++...... .
T Consensus 140 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------------------------~------------ 173 (345)
T 1xjd_A 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGD----------------------------------A------------ 173 (345)
T ss_dssp BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT----------------------------------C------------
T ss_pred EeCCCChhhEEECCCCCEEEeEChhhhhcccCC----------------------------------C------------
Confidence 999999999999999999999998874321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 174 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 209 (345)
T 1xjd_A 174 --------------------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 209 (345)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHH
Confidence 001147899999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+..... .++... +...+||.+||..||.+||++. +|++||||+..
T Consensus 210 ell~g~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 210 EMLIGQSPFHGQDEE-ELFHSIRMDNP--FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHhCCC--CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 9999 67665443 34444443321 122223 4455999999999999999998 99999999986
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-35 Score=310.02 Aligned_cols=213 Identities=15% Similarity=0.178 Sum_probs=162.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-----~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+..+|..+|.+++|||||++++ ++..+. .+|+||||.+++|.+++... ...+++..++.++.||+.||.||
T Consensus 49 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l 124 (317)
T 2pmi_A 49 TAIREISLMKELKHENIVRLYD-VIHTEN---KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124 (317)
T ss_dssp HHHHHHHHHTTCCBTTBCCEEE-EECCTT---EEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcceEEE-EEEECC---eEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 3446888999999999999999 555443 68999999667999999432 23589999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+|||++.++.+||+|||++...+....
T Consensus 125 H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------- 163 (317)
T 2pmi_A 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN----------------------------------------- 163 (317)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC-----------------------------------------
T ss_pred HHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc-----------------------------------------
Confidence 999999999999999999999999999998844321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
......||+.|+|||++.+. .++.++||||
T Consensus 164 -------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws 194 (317)
T 2pmi_A 164 -------------------------------------------------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWS 194 (317)
T ss_dssp -------------------------------------------------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHH
T ss_pred -------------------------------------------------cCCCCcccccccCchHhhCCCCCCcHHHHHH
Confidence 00113689999999999875 4899999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhc-CCCCc------------------------------ccc-ccCchHHHHH
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP------------------------------QLL-LKFPKEASFC 341 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~------------------------------~~~-~~~p~~~~Li 341 (720)
|||++|||++ ||............... +..++ ... ...+...+||
T Consensus 195 lG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 274 (317)
T 2pmi_A 195 CGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFL 274 (317)
T ss_dssp HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHH
Confidence 9999999999 67665443222211110 00000 000 1223445999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.+||++||.+|||+.|+|+||||++...
T Consensus 275 ~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 275 HGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp HHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred HHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 9999999999999999999999998744
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=318.67 Aligned_cols=211 Identities=18% Similarity=0.282 Sum_probs=168.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 94 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 169 (387)
T 1kob_A 94 TVKNEISIMNQLHHPKLINLHD-AFEDKY---EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169 (387)
T ss_dssp HHHHHHHHHTTCCSTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCCCeEEE-EEEeCC---EEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 555543 68999999 899999999766656999999999999999999999999
Q ss_pred ceeccCCCCcEEEcc--CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 142 IVVHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 142 IvHrDLKP~NILl~~--~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|+||||||+|||++. .+.+||+|||++.......
T Consensus 170 ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~-------------------------------------------- 205 (387)
T 1kob_A 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-------------------------------------------- 205 (387)
T ss_dssp EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--------------------------------------------
T ss_pred eeecccchHHeEEecCCCCceEEEecccceecCCCc--------------------------------------------
Confidence 999999999999974 4679999988874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 206 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 238 (387)
T 1kob_A 206 -----------------------------------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 238 (387)
T ss_dssp -----------------------------------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHH
T ss_pred -----------------------------------------------ceeeeccCCCccCchhccCCCCCCcccEeeHhH
Confidence 001136899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||...... .....+... .+++.....+ +...+||.+||+.||.+|||+.|+|+||||+....
T Consensus 239 il~elltg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 239 LGYVLLSGLSPFAGEDDL-ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHHHHSCCSSCCSSHH-HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 9999999 67665443 333333332 2233333333 45569999999999999999999999999987633
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=315.29 Aligned_cols=214 Identities=18% Similarity=0.268 Sum_probs=163.0
Q ss_pred hchhhhhhcccCCC--CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDH--LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~H--pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++.| |||+++++ ++..+. .+|+|||+.+++|.+++.... .+++.+++.|+.||+.||.|||++
T Consensus 53 ~~~~E~~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~ 127 (343)
T 3dbq_A 53 SYRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH 127 (343)
T ss_dssp HHHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhcCCceEEEee-eEeeCC---EEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34478888988877 99999999 555443 689999998899999996543 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.+||+|||++.........
T Consensus 128 ~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~------------------------------------------- 163 (343)
T 3dbq_A 128 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS------------------------------------------- 163 (343)
T ss_dssp TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------------------------------------------------
T ss_pred CeecCCCCcceEEEE-CCcEEEeecccccccCccccc-------------------------------------------
Confidence 999999999999996 688999999988443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----------CCCC
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVS 289 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s 289 (720)
......+||+.|+|||++.+ ..++
T Consensus 164 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~ 198 (343)
T 3dbq_A 164 ---------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 198 (343)
T ss_dssp ---------------------------------------------------CCCCSSCCHHHHHHCC-----------CC
T ss_pred ---------------------------------------------ccCCCCcCCcCcCCHHHHhhccccccccccccCCC
Confidence 00011478999999999864 5589
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
.++|||||||++|||++ ||.........+..+........++...+ ...+|+.+||++||.+|||+.|+|+||||+
T Consensus 199 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 278 (343)
T 3dbq_A 199 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278 (343)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence 99999999999999999 67654444333444433333333333444 455999999999999999999999999998
Q ss_pred CCccc
Q 004989 366 EPRDS 370 (720)
Q Consensus 366 ~~~~~ 370 (720)
....+
T Consensus 279 ~~~~~ 283 (343)
T 3dbq_A 279 IQTHP 283 (343)
T ss_dssp SCCC-
T ss_pred ccCCc
Confidence 76443
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=324.69 Aligned_cols=208 Identities=19% Similarity=0.215 Sum_probs=165.8
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 71 ~~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~ 145 (484)
T 3nyv_A 71 ESLLREVQLLKQLDHPNIMKLYE-FFEDKG---YFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKN 145 (484)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34457888999999999999999 565543 68999999 8999999996544 499999999999999999999999
Q ss_pred CceeccCCCCcEEE---ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 141 GIVVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||+ +.++.+||+|||++.......
T Consensus 146 ~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------ 183 (484)
T 3nyv_A 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK------------------------------------------ 183 (484)
T ss_dssp TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC------------------------------------------
T ss_pred CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc------------------------------------------
Confidence 99999999999999 467889999888873321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.....+||+.|+|||++.+ .|+.++|||||
T Consensus 184 -------------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Diwsl 213 (484)
T 3nyv_A 184 -------------------------------------------------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWST 213 (484)
T ss_dssp -------------------------------------------------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHH
T ss_pred -------------------------------------------------ccccCCCCccccCceeecC-CCCCcceeHHH
Confidence 0011468999999999987 59999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||...... .....+..+.++ +.+....+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 214 G~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 214 GVILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp HHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence 999999999 67665544 344444444332 2222334455699999999999999999999999999864
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=311.56 Aligned_cols=209 Identities=15% Similarity=0.161 Sum_probs=159.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++||||+++++ ++.... .+++|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 96 ~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~iv 170 (349)
T 2w4o_A 96 RTEIGVLLRLSHPNIIKLKE-IFETPT---EISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENGIV 170 (349)
T ss_dssp ---CHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCcceee-eEecCC---eEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 36777999999999999999 555443 57999999 899999999554 3499999999999999999999999999
Q ss_pred eccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 144 VHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++. ++.+||+|||++.......
T Consensus 171 H~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 205 (349)
T 2w4o_A 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--------------------------------------------- 205 (349)
T ss_dssp CCCCCGGGEEESSSSTTCCEEECCCC------------------------------------------------------
T ss_pred ecCCCcccEEEecCCCCCCEEEccCccccccCccc---------------------------------------------
Confidence 9999999999975 8899999988874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 206 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 239 (349)
T 2w4o_A 206 ----------------------------------------------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGII 239 (349)
T ss_dssp -----------------------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCCCccCHHHhcCCCCCcccchHHHHHH
Confidence 0011468999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCC--CccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||............+..... ++...... +...+||.+||.+||.+|||+.|+|+||||.....
T Consensus 240 l~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 240 TYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred HHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence 999999 67655544444444444322 22222333 44559999999999999999999999999997643
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=318.77 Aligned_cols=238 Identities=16% Similarity=0.117 Sum_probs=169.2
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCC
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVD 119 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~ 119 (720)
.+.++++++..... .....-+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .+++|.+++... ...++
T Consensus 52 ~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~ 126 (389)
T 3gni_B 52 GEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRA-TFIADN---ELWVVTSFMAYGSAKDLICTHFMDGMN 126 (389)
T ss_dssp CCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHTCTTCCC
T ss_pred CCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeE-EEEECC---EEEEEEEccCCCCHHHHHhhhcccCCC
Confidence 34445454443222 2222234447888999999999999999 555443 68999999 899999999443 34599
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhh
Q 004989 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
+..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||.+....
T Consensus 127 ~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~--------------------------- 179 (389)
T 3gni_B 127 ELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI--------------------------- 179 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECE---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeec---------------------------
Confidence 99999999999999999999999999999999999999999999998873221
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004989 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
+.|..... ........+||+.|+|
T Consensus 180 ---------~~~~~~~~-----------------------------------------------~~~~~~~~~gt~~y~a 203 (389)
T 3gni_B 180 ---------SHGQRQRV-----------------------------------------------VHDFPKYSVKVLPWLS 203 (389)
T ss_dssp ---------ETTEECSC-----------------------------------------------BCCCCTTCTTTGGGSC
T ss_pred ---------cccccccc-----------------------------------------------cccccccccccccccC
Confidence 11000000 0000011478999999
Q ss_pred cccccC--CCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCC---------------------------
Q 004989 280 PEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP--------------------------- 327 (720)
Q Consensus 280 PE~l~~--~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p--------------------------- 327 (720)
||++.+ ..++.++|||||||++|||++ ||............+... .+
T Consensus 204 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (389)
T 3gni_B 204 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT-VPCLLDTSTIPAEELTMSPSRSVANSGLS 282 (389)
T ss_dssp HHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------------
T ss_pred HHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-CCccccccccccccccccccccccccccc
Confidence 999988 469999999999999999999 676543332222222110 00
Q ss_pred -----------------ccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 328 -----------------PQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 328 -----------------~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
..+.. ..+...+||.+||++||.+|||+.|+|+||||+...
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 283 DSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp -----------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred cccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 00111 223445999999999999999999999999998764
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=314.19 Aligned_cols=210 Identities=13% Similarity=0.153 Sum_probs=164.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++.++. ..|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 53 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~giv 127 (323)
T 3tki_A 53 KKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGIT 127 (323)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEecCC---eEEEEEEcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 46777899999999999999 555543 67999999 789999999544 4499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++.........
T Consensus 128 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------- 161 (323)
T 3tki_A 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRE---------------------------------------------- 161 (323)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECEETTEE----------------------------------------------
T ss_pred ccccchHHEEEeCCCCEEEEEeeccceeccCCcc----------------------------------------------
Confidence 9999999999999999999999987432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll~ 302 (720)
.......||+.|+|||++.+..+ +.++|||||||++|
T Consensus 162 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 199 (323)
T 3tki_A 162 ------------------------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199 (323)
T ss_dssp ------------------------------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHH
Confidence 00011478999999999988775 78999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC-CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~-~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||................ ...+......+...+||.+||++||.+|||+.|+++||||+..
T Consensus 200 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp HHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 9999 676544432333333322 2223333344555699999999999999999999999999875
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-35 Score=320.07 Aligned_cols=206 Identities=18% Similarity=0.276 Sum_probs=161.2
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.++ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.|+.||+.||.|||++||
T Consensus 100 ~~E~~il~~~~~hp~Iv~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~gi 174 (396)
T 4dc2_A 100 QTEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGI 174 (396)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCcCeeEE-EEEECC---EEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 3566677665 8999999999 665543 68999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||+++...... +
T Consensus 175 vHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------------------------~------------- 208 (396)
T 4dc2_A 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D------------- 208 (396)
T ss_dssp BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------------------------C-------------
T ss_pred EeccCCHHHEEECCCCCEEEeecceeeecccCC---------------------------------C-------------
Confidence 999999999999999999999999884311100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..|+.++|||||||++|
T Consensus 209 --------------------------------------------~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvlly 244 (396)
T 4dc2_A 209 --------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 244 (396)
T ss_dssp --------------------------------------------CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHH
Confidence 001257899999999999999999999999999999
Q ss_pred hccc---cCCCCc--------hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCccc
Q 004989 303 ELFC---PFSTGE--------EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~--------~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~~ 364 (720)
||++ ||.... ........+....+ .++. ..+...+||.+||++||.+||++ .||++||||
T Consensus 245 ell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff 322 (396)
T 4dc2_A 245 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322 (396)
T ss_dssp HHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred HHHhCCCCCcccccccccchhhHHHHHHHHhcccc--CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence 9999 664221 11223333333221 1122 23455699999999999999985 799999999
Q ss_pred CCC
Q 004989 365 NEP 367 (720)
Q Consensus 365 ~~~ 367 (720)
+..
T Consensus 323 ~~i 325 (396)
T 4dc2_A 323 RNV 325 (396)
T ss_dssp TTC
T ss_pred cCC
Confidence 986
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=324.57 Aligned_cols=206 Identities=16% Similarity=0.195 Sum_probs=163.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+. .+++..++.++.||+.||.|||++||||
T Consensus 118 ~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givH 191 (410)
T 3v8s_A 118 EERDIMAFANSPWVVQLFY-AFQDDR---YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIH 191 (410)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 5667889999999999999 665543 68999999 799999999653 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.+|++||+|||++.........
T Consensus 192 rDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~----------------------------------------------- 224 (410)
T 3v8s_A 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV----------------------------------------------- 224 (410)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSEE-----------------------------------------------
T ss_pred ccCCHHHeeECCCCCEEEeccceeEeeccCCcc-----------------------------------------------
Confidence 999999999999999999999988432211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----CCccccchhhhch
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+.. |+.++|||||||+
T Consensus 225 ------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvi 262 (410)
T 3v8s_A 225 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262 (410)
T ss_dssp ------------------------------------------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHH
T ss_pred ------------------------------------------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHH
Confidence 001247999999999998765 8899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC---CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~---~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+... ...|......+...+||.+||..+|.+ ||+++||++||||+..
T Consensus 263 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 263 LYEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred HHHHHhCCCCCCCCChh-hHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 999999 77665544 333333321 111222223345569999999999988 9999999999999986
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=315.46 Aligned_cols=208 Identities=15% Similarity=0.168 Sum_probs=155.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||
T Consensus 63 ~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~i 137 (361)
T 3uc3_A 63 VQREIINHRSLRHPNIVRFKE-VILTPT---HLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQI 137 (361)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEeeCC---EEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347788899999999999999 555443 58999999 7999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc--eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 143 VVHNVRPSCFVMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~--vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+||||||+|||++.++. +||+|||++.......
T Consensus 138 vH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 172 (361)
T 3uc3_A 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--------------------------------------------- 172 (361)
T ss_dssp CSCCCCGGGEEECSSSSCCEEECCCCCC----------------------------------------------------
T ss_pred ccCCCCHHHEEEcCCCCceEEEeecCccccccccC---------------------------------------------
Confidence 99999999999987665 9999888773210000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcc-ccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA-SDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~-sDIwSLGv 299 (720)
.....+||++|+|||++.+..++.+ +|||||||
T Consensus 173 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 206 (361)
T 3uc3_A 173 ----------------------------------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGV 206 (361)
T ss_dssp ------------------------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHH
T ss_pred ----------------------------------------------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHH
Confidence 0011468999999999988887554 99999999
Q ss_pred hhhhccc---cCCCCch---HHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEE---KTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~---~~~~~~~l~~~~~-p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|+|++ ||..... ....+..+..... .+......+...+||.+||++||.+|||+.|+++||||...
T Consensus 207 il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 207 TLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp HHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred HHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence 9999999 6654322 2233333332222 22222334556699999999999999999999999999765
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=313.40 Aligned_cols=208 Identities=19% Similarity=0.249 Sum_probs=163.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+ .+..+++..++.++.||+.||.|||+
T Consensus 73 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 148 (351)
T 3c0i_A 73 LKREASICHMLKHPHIVELLE-TYSSDG---MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148 (351)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 447788999999999999999 555543 68999999 88999988832 33458999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+||+||||||+|||++.++. +||+|||++...+....
T Consensus 149 ~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~---------------------------------------- 188 (351)
T 3c0i_A 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL---------------------------------------- 188 (351)
T ss_dssp TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC----------------------------------------
T ss_pred CCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe----------------------------------------
Confidence 99999999999999986654 99999888743321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchh
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.....+||+.|+|||++.+..++.++||||
T Consensus 189 --------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 218 (351)
T 3c0i_A 189 --------------------------------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218 (351)
T ss_dssp --------------------------------------------------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHH
T ss_pred --------------------------------------------------eecCCcCCcCccCHHHHcCCCCCchHhhHH
Confidence 001147899999999999988999999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++|+|++ ||..... .....+.... .++......+ ...+||.+||++||.+|||+.|+|+||||+..
T Consensus 219 lG~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 219 CGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHHHHHHHHHSSCSSCSSHH--HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred HHHHHHHHHHCCCCCCCcHH--HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 9999999999 6665432 3334443332 2333333334 45599999999999999999999999999763
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=319.40 Aligned_cols=214 Identities=16% Similarity=0.209 Sum_probs=156.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~---~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++... .....+|++||+.+++|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 74 ~~~~E~~~l~~l~hpnIv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~ 150 (367)
T 2fst_X 74 RTYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS 150 (367)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEecCCccccCCeEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4558889999999999999999 54432 12245799999998999998854 349999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+..
T Consensus 151 ~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------------------------- 185 (367)
T 2fst_X 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--------------------------------------------- 185 (367)
T ss_dssp TTCCCCCCCGGGEEECTTCCEEECC-------------------------------------------------------
T ss_pred CCeeeCCCCHhhEEECCCCCEEEeecccccccccc---------------------------------------------
Confidence 99999999999999999999999998887332100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
....+||++|+|||++.+ ..++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 217 (367)
T 2fst_X 186 ------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217 (367)
T ss_dssp -----------------------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHH
T ss_pred ------------------------------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHH
Confidence 011478999999999987 5689999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CCC-----------------------Cc-----cccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVL-----------------------PP-----QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~-----------------------p~-----~~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||.+..........+.. +.. +. .+....+...+||.+||.
T Consensus 218 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~ 297 (367)
T 2fst_X 218 CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297 (367)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCC
Confidence 99999999 67665443222211110 000 00 011223445699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.|+|+||||.....+..
T Consensus 298 ~dP~~R~t~~e~L~hp~~~~~~~~~~ 323 (367)
T 2fst_X 298 LDSDKRITAAQALAHAYFAQYHDPDD 323 (367)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCCGGG
T ss_pred CCcccCcCHHHHhcChhhhhccCCCC
Confidence 99999999999999999998765443
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=311.94 Aligned_cols=207 Identities=18% Similarity=0.271 Sum_probs=161.8
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.++ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 56 ~~~E~~~l~~~~~hp~iv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ 130 (345)
T 3a8x_A 56 VQTEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERG 130 (345)
T ss_dssp HHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCccCeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34677788776 8999999999 555543 68999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++++||+|||+++...... +
T Consensus 131 ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------------------------~------------ 165 (345)
T 3a8x_A 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D------------ 165 (345)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------------------------C------------
T ss_pred ceecCCCHHHEEECCCCCEEEEeccccccccCCC---------------------------------C------------
Confidence 9999999999999999999999998874311100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 166 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 200 (345)
T 3a8x_A 166 ---------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 200 (345)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccCccccCCCCCChHHhHHHHHHHH
Confidence 00114789999999999998899999999999999
Q ss_pred hhccc---cCCCC--------chHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCcc
Q 004989 302 FELFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEF 363 (720)
Q Consensus 302 ~eLlt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~ 363 (720)
|||++ ||... .........+....+. ++. ..+...+||.+||+.||.+||++ .|+++|||
T Consensus 201 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~ 278 (345)
T 3a8x_A 201 FEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 278 (345)
T ss_dssp HHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGG
T ss_pred HHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCc
Confidence 99999 66431 1122233333332211 222 23455699999999999999986 79999999
Q ss_pred cCCC
Q 004989 364 LNEP 367 (720)
Q Consensus 364 ~~~~ 367 (720)
|+..
T Consensus 279 f~~~ 282 (345)
T 3a8x_A 279 FRNV 282 (345)
T ss_dssp GTTC
T ss_pred cCCC
Confidence 9876
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=318.62 Aligned_cols=204 Identities=18% Similarity=0.219 Sum_probs=160.2
Q ss_pred hhhhh-cccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVE-LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~-L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+ +..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 87 ~e~~~ll~~~~hp~Iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~giv 161 (373)
T 2r5t_A 87 SERNVLLKNVKHPFLVGLHF-SFQTAD---KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIV 161 (373)
T ss_dssp ----CCBCCCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCCCEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 34434 67799999999999 555543 68999999 8999999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++......
T Consensus 162 HrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~------------------------------------------------ 193 (373)
T 2r5t_A 162 YRDLKPENILLDSQGHIVLTDFGLCKENIEHN------------------------------------------------ 193 (373)
T ss_dssp CCCCCGGGEEECTTSCEEECCCCBCGGGBCCC------------------------------------------------
T ss_pred ecCCCHHHEEECCCCCEEEeeCccccccccCC------------------------------------------------
Confidence 99999999999999999999999874210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+||+.|+|||++.+..++.++|||||||++||
T Consensus 194 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 231 (373)
T 2r5t_A 194 ------------------------------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE 231 (373)
T ss_dssp ------------------------------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHH
Confidence 00011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+ .+.... +...+||.+||+.||.+||++ .++++||||+..
T Consensus 232 ll~G~~Pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 232 MLYGLPPFYSRNTA-EMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp HHHSSCTTCCSBHH-HHHHHHHHSCC--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred HHcCCCCCCCCCHH-HHHHHHHhccc--CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 999 77665544 34444443322 122233 444599999999999999986 699999999986
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=305.18 Aligned_cols=208 Identities=15% Similarity=0.185 Sum_probs=161.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. ...+|+|||| .+++|.+++.. ..+++.+++.++.||+.||.|||++||
T Consensus 83 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i 158 (298)
T 2zv2_A 83 VYQEIAILKKLDHPNVVKLVE-VLDDPN-EDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQKI 158 (298)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS-SSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEEcCC-CCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 554422 2368999999 88999886633 359999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++........
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 192 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA---------------------------------------------- 192 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC----------------------------------------------
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccccc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccchhhhc
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+.. ++.++|||||||
T Consensus 193 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~ 228 (298)
T 2zv2_A 193 --------------------------------------------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGV 228 (298)
T ss_dssp --------------------------------------------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHH
T ss_pred --------------------------------------------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHH
Confidence 001146899999999998765 478899999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++|||++ ||...... .....+.....+ +......+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 229 ~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~ 298 (298)
T 2zv2_A 229 TLYCFVFGQCPFMDERIM-CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298 (298)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred HHHHHHHCCCCCCCccHH-HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence 9999999 67655433 333334333332 222223345569999999999999999999999999863
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=316.26 Aligned_cols=209 Identities=18% Similarity=0.205 Sum_probs=166.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 133 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 208 (373)
T 2x4f_A 133 VKNEISVMNQLDHANLIQLYD-AFESKN---DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI 208 (373)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347888999999999999999 555543 57999999 8899999996555569999999999999999999999999
Q ss_pred eeccCCCCcEEE--ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 143 VVHNVRPSCFVM--SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 143 vHrDLKP~NILl--~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+||||||+|||+ +.++.+||+|||++.......
T Consensus 209 vH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--------------------------------------------- 243 (373)
T 2x4f_A 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--------------------------------------------- 243 (373)
T ss_dssp ECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---------------------------------------------
T ss_pred ccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---------------------------------------------
Confidence 999999999999 466789999998874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 244 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 277 (373)
T 2x4f_A 244 ----------------------------------------------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277 (373)
T ss_dssp ----------------------------------------------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHH
Confidence 0011368999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC-CCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~-~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||............+... .+++..... .+...+||.+||.+||.+|||+.|+|+||||...
T Consensus 278 l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 278 AYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 999999 776655543333333222 223332333 3455599999999999999999999999999875
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=300.63 Aligned_cols=209 Identities=17% Similarity=0.218 Sum_probs=159.9
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
-+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .+++|.+++.. .+..+++..++.++.||+.||.||
T Consensus 65 ~~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L 140 (285)
T 3is5_A 65 EQIEAEIEVLKSLDHPNIIKIFE-VFEDYH---NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140 (285)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCchHHhHHH-heecCC---eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 34457888999999999999999 555443 57999999 88999999832 235599999999999999999999
Q ss_pred HHCCceeccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 138 HSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|++||+||||||+||+++ .++.+||+|||.+.......
T Consensus 141 H~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------- 181 (285)
T 3is5_A 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE--------------------------------------- 181 (285)
T ss_dssp HHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--------------------------------------------
T ss_pred HhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc---------------------------------------
Confidence 999999999999999994 56789999988874321110
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
......||+.|+|||++.+ .++.++||
T Consensus 182 ----------------------------------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di 208 (285)
T 3is5_A 182 ----------------------------------------------------HSTNAAGTALYMAPEVFKR-DVTFKCDI 208 (285)
T ss_dssp ---------------------------------------------------------CTTGGGCCHHHHTT-CCCHHHHH
T ss_pred ----------------------------------------------------cCcCcccccCcCChHHhcc-CCCcccCe
Confidence 0011368999999999864 58999999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhh-cCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~-~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|||||++|||++ ||.............. ....+.......+...+|+.+||++||.+|||+.|+|+||||++
T Consensus 209 ~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 209 WSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred ehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 999999999999 6766544322222222 22222222233455669999999999999999999999999985
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=318.25 Aligned_cols=213 Identities=18% Similarity=0.263 Sum_probs=162.0
Q ss_pred hchhhhhhcccCC--CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. |||||++++ ++.... .+|+|||+.+++|.+++.... .+++.+++.|+.||+.||.|||++
T Consensus 100 ~~~~Ei~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~ 174 (390)
T 2zmd_A 100 SYRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH 174 (390)
T ss_dssp HHHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcccCCCeEEEEEE-EEecCC---EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4447888888886 599999999 554443 589999998899999996544 589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.+||+|||++.........
T Consensus 175 ~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~------------------------------------------- 210 (390)
T 2zmd_A 175 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS------------------------------------------- 210 (390)
T ss_dssp TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------------------------------------------------
T ss_pred CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc-------------------------------------------
Confidence 999999999999995 689999999988443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----------CCCC
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVS 289 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s 289 (720)
......+||+.|+|||++.+ ..++
T Consensus 211 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~ 245 (390)
T 2zmd_A 211 ---------------------------------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKIS 245 (390)
T ss_dssp ------------------------------------------------CCSCCCGGGCCHHHHHCC------------CC
T ss_pred ---------------------------------------------ccCCCCCcCCCccChHHhhhccccccccccccCCC
Confidence 00011478999999999975 3589
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
.++|||||||+||||++ ||.........+..+........++...+ ...+||.+||..||.+|||+.|+|+||||.
T Consensus 246 ~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~ 325 (390)
T 2zmd_A 246 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325 (390)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred ChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence 99999999999999999 67654443334444443333333333333 455999999999999999999999999998
Q ss_pred CCcc
Q 004989 366 EPRD 369 (720)
Q Consensus 366 ~~~~ 369 (720)
....
T Consensus 326 ~~~~ 329 (390)
T 2zmd_A 326 IQTH 329 (390)
T ss_dssp SCC-
T ss_pred ccCc
Confidence 7643
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-34 Score=304.34 Aligned_cols=209 Identities=18% Similarity=0.257 Sum_probs=167.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~ 135 (321)
T 2a2a_A 61 EIEREVSILRQVLHHNVITLHD-VYENRT---DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK 135 (321)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEecCC---EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 555443 68999999 799999999654 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 142 IVVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+||+++.++ .++|+|||.+.......
T Consensus 136 ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------ 173 (321)
T 2a2a_A 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV------------------------------------------ 173 (321)
T ss_dssp EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC------------------------------------------
T ss_pred eecCCCChHHEEEecCCCCcCCEEEccCccceecCccc------------------------------------------
Confidence 99999999999999887 79999888874321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 174 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 204 (321)
T 2a2a_A 174 -------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204 (321)
T ss_dssp -------------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------cccccCCCCCccCcccccCCCCCCccccHHH
Confidence 0011368999999999998889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++|+|++ ||...... .....+... .+++.+....+. ..+||.+||++||.+|||+.|+|+||||....
T Consensus 205 G~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~ 280 (321)
T 2a2a_A 205 GVITYILLSGASPFLGDTKQ-ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280 (321)
T ss_dssp HHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence 999999999 77665443 333344332 233333344444 45999999999999999999999999998763
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-35 Score=321.63 Aligned_cols=206 Identities=21% Similarity=0.298 Sum_probs=161.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.++|.+.+..+++..++.|+.||+.||.|||++||||
T Consensus 110 ~E~~il~~~~hp~Iv~l~~-~~~~~~---~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiH 185 (412)
T 2vd5_A 110 EERDVLVNGDRRWITQLHF-AFQDEN---YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185 (412)
T ss_dssp HHHHHHHHSCTTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCCeeeEEE-EEeeCC---EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 5666888999999999999 665553 68999999 799999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++++||+|||++........
T Consensus 186 rDLKp~NILld~~g~vkL~DFGla~~~~~~~~------------------------------------------------ 217 (412)
T 2vd5_A 186 RDIKPDNILLDRCGHIRLADFGSCLKLRADGT------------------------------------------------ 217 (412)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSC------------------------------------------------
T ss_pred cccCHHHeeecCCCCEEEeechhheeccCCCc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-------CCCCCccccchhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-------GAPVSCASDIYRL 297 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-------~~~~s~~sDIwSL 297 (720)
......+||+.|+|||++. +..|+.++|||||
T Consensus 218 -----------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSl 256 (412)
T 2vd5_A 218 -----------------------------------------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWAL 256 (412)
T ss_dssp -----------------------------------------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHH
T ss_pred -----------------------------------------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHH
Confidence 0001147899999999997 3458999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc----CCCCccccccC-chHHHHHHHcCCCCCCCC---CChHHHHcCcccCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKF-PKEASFCLWLLHPEPSGR---PKMGELLQSEFLNE 366 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~----~~~p~~~~~~~-p~~~~Li~~~L~~dP~~R---pta~eiL~hp~~~~ 366 (720)
||++|||++ ||...... ..+..+.+ ..+|. ..... +...+||.+||. +|.+| |+++||++||||+.
T Consensus 257 GvilyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~-~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~ 333 (412)
T 2vd5_A 257 GVFAYEMFYGQTPFYADSTA-ETYGKIVHYKEHLSLPL-VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG 333 (412)
T ss_dssp HHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred hHHHHHHHhCCCCCCCCCHH-HHHHHHHhcccCcCCCc-cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence 999999999 77665444 33333322 22232 22333 445599999999 99998 59999999999997
Q ss_pred C
Q 004989 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 334 i 334 (412)
T 2vd5_A 334 L 334 (412)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=319.29 Aligned_cols=242 Identities=14% Similarity=0.160 Sum_probs=163.6
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+..+|..+|.+++||||+++++ ++.... ....+|+||||.+++|.+++... ..+++..++.++.||+.||.|||+
T Consensus 70 ~~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~ 147 (432)
T 3n9x_A 70 KRILREITILNRLKSDYIIRLYD-LIIPDDLLKFDELYIVLEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHE 147 (432)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-ECCCSCTTTCCCEEEEEECCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCcceEEE-EEecCCCCcCCeEEEEEecCCcCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35568999999999999999999 443331 22468999999778999999654 449999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++........... .++.-..
T Consensus 148 ~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~---------------------------~~~~~~~----- 195 (432)
T 3n9x_A 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV---------------------------NDLEENE----- 195 (432)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEEC------------------------------------------------
T ss_pred CCCCCCCCCHHHeEECCCCCEEEccCCCccccccccccccc---------------------------ccccccc-----
Confidence 99999999999999999999999999998654322110000 0000000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc-cCCCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l-~~~~~s~~sDIwSLG 298 (720)
. . ...........+..+||++|+|||++ .+..|+.++||||||
T Consensus 196 -----~------~-------------------------~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG 239 (432)
T 3n9x_A 196 -----E------P-------------------------GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG 239 (432)
T ss_dssp ---------------------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred -----c------c-------------------------cccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHH
Confidence 0 0 00000000011236899999999986 455599999999999
Q ss_pred chhhhccc-------------cCC-CCch----------------HHHHH------------------------HHhhc-
Q 004989 299 VLLFELFC-------------PFS-TGEE----------------KTRTM------------------------SSLRH- 323 (720)
Q Consensus 299 vll~eLlt-------------pf~-~~~~----------------~~~~~------------------------~~l~~- 323 (720)
|++|||++ |+. +... ....+ ..+..
T Consensus 240 ~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~ 319 (432)
T 3n9x_A 240 CIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLF 319 (432)
T ss_dssp HHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTS
T ss_pred HHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhC
Confidence 99999995 221 1110 00000 00100
Q ss_pred -CCCCc----cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHH
Q 004989 324 -RVLPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 324 -~~~p~----~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
...+. .+....+...+||.+||++||.+|||++|+|+||||+.......+
T Consensus 320 ~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e 374 (432)
T 3n9x_A 320 PHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE 374 (432)
T ss_dssp CCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC
T ss_pred CCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccC
Confidence 00000 012233455699999999999999999999999999998654433
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=301.43 Aligned_cols=228 Identities=22% Similarity=0.302 Sum_probs=167.9
Q ss_pred chhhhhhcccCCCCCceecccceeecC---------CCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENE---------AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~---------~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~a 133 (720)
..+|..++.+++||||+++++.+.... .....+|+|||| .|++|.+++......+++..++.++.||+.|
T Consensus 49 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~ 128 (303)
T 1zy4_A 49 ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEA 128 (303)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHH
Confidence 347888999999999999999443321 123468999999 7899999997655568999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+||||||+|||++.++.++|+|||.+......... ..+.
T Consensus 129 l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~~~-- 176 (303)
T 1zy4_A 129 LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI------------------------------LKLD-- 176 (303)
T ss_dssp HHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC----------------------------------------
T ss_pred HHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccch------------------------------hccc--
Confidence 99999999999999999999999999999999988543221000 0000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCAS 292 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~s 292 (720)
. . .. ...........||+.|+|||++.+. .++.++
T Consensus 177 ---~-------~--------------------~~--------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 212 (303)
T 1zy4_A 177 ---S-------Q--------------------NL--------------PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212 (303)
T ss_dssp -------------------------------------------------------------CTTSCHHHHTSCSCCCTHH
T ss_pred ---c-------c--------------------cc--------------cccccccccCCCcccccCcccccCCCCCcchh
Confidence 0 0 00 0000001124789999999999865 589999
Q ss_pred cchhhhchhhhccccCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 293 DIYRLGVLLFELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 293 DIwSLGvll~eLltpf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||||++|||++||............+... .+|+.+....+. ..+|+.+||++||.+|||+.++++||||...
T Consensus 213 Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 213 DMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hHHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 99999999999999988765554555555432 344444444444 4599999999999999999999999999875
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=307.58 Aligned_cols=213 Identities=15% Similarity=0.179 Sum_probs=162.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.... .+++||||.+++|.+++...+..+++..++.++.||+.||.|||++||
T Consensus 46 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 121 (324)
T 3mtl_A 46 TAIREVSLLKDLKHANIVTLHD-IIHTEK---SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV 121 (324)
T ss_dssp CCCCCHHHHSCCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred hHHHHHHHHHhcCCCCCCeeee-EEeeCC---EEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3346888999999999999999 555443 579999997779999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+....
T Consensus 122 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------- 155 (324)
T 3mtl_A 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTK---------------------------------------------- 155 (324)
T ss_dssp EESSCCGGGEEECTTCCEEECSSSEEECC---------------------------------------------------
T ss_pred cCCCcCHHHEEECCCCCEEEccCcccccccCCcc----------------------------------------------
Confidence 9999999999999999999999998743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll 301 (720)
......||++|+|||++.+ ..++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 191 (324)
T 3mtl_A 156 --------------------------------------------TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF 191 (324)
T ss_dssp ---------------------------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHH
Confidence 0011367999999999987 4589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh--cCCCCccc--------------------------cccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLR--HRVLPPQL--------------------------LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~--~~~~p~~~--------------------------~~~~p~~~~Li~~~L~~dP~ 350 (720)
|+|++ ||.............. ....+..+ ....+...+||.+||++||.
T Consensus 192 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 271 (324)
T 3mtl_A 192 YEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGR 271 (324)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGG
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcc
Confidence 99999 6766544332222211 11111100 01223445999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004989 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||+.|+|+||||.....
T Consensus 272 ~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 272 NRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp GSCCHHHHTTSGGGGGGCS
T ss_pred cCCCHHHHhcChhhhhccc
Confidence 9999999999999998754
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=299.45 Aligned_cols=211 Identities=19% Similarity=0.215 Sum_probs=166.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... ..+++||| .|++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 125 (284)
T 3kk8_A 51 KLEREARICRKLQHPNIVRLHD-SIQEES---FHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG 125 (284)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCcCeEEE-EEEcCC---EEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 555443 57999999 889999988544 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||+++.++. +||+|||.+...+...
T Consensus 126 i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 162 (284)
T 3kk8_A 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE------------------------------------------- 162 (284)
T ss_dssp EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC-------------------------------------------
T ss_pred cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc-------------------------------------------
Confidence 999999999999986655 9999888873321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 163 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 194 (284)
T 3kk8_A 163 ------------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 194 (284)
T ss_dssp ------------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------cccCCCCCcCCcCchhhcCCCCCcccchHHHH
Confidence 00113689999999999999899999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCC--CCccc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~-~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|+|++ ||...... .....+.... .+... ....+...+|+.+||++||.+|||+.|+|+||||+.....
T Consensus 195 ~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 195 VILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV 271 (284)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred HHHHHHHHCCCCCCCCchh-HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence 99999999 66655443 3333333322 22222 2333455699999999999999999999999999887443
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=320.70 Aligned_cols=207 Identities=17% Similarity=0.252 Sum_probs=161.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||+ +
T Consensus 194 ~~~~e~~~l~~l~h~~iv~l~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 268 (446)
T 4ejn_A 194 HTLTENRVLQNSRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK 268 (446)
T ss_dssp -------CCCCCSCTTSCCEEE-EEEETT---EEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCeEeeEEE-EEeeCC---EEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 3446778999999999999999 555443 57999999 8999999995443 49999999999999999999998 9
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.++.+||+|||++........
T Consensus 269 giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------- 304 (446)
T 4ejn_A 269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-------------------------------------------- 304 (446)
T ss_dssp CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----------------------------------------------
T ss_pred CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc--------------------------------------------
Confidence 999999999999999999999999998743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..|+.++|||||||+
T Consensus 305 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 338 (446)
T 4ejn_A 305 ----------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 338 (446)
T ss_dssp ------------------------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCccccCHhhcCCCCCCCccchhhhHHH
Confidence 0011478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+....++ ++. ..+...+||.+||++||.+|| ++.|+|+||||+..
T Consensus 339 l~ell~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 339 MYEMMCGRLPFYNQDHE-KLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHHhCCCC--CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 999999 77665544 333333322221 112 234556999999999999999 99999999999986
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=312.08 Aligned_cols=206 Identities=16% Similarity=0.225 Sum_probs=164.0
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|..+ +||||+++++ ++++.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 67 ~~~E~~~l~~~~~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~g 141 (353)
T 2i0e_A 67 TMVEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKG 141 (353)
T ss_dssp HHHHHHHHTCTTCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCEEeeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33666778776 8999999999 555543 68999999 8999999996543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|++||+|||++........
T Consensus 142 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--------------------------------------------- 176 (353)
T 2i0e_A 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--------------------------------------------- 176 (353)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC---------------------------------------------
T ss_pred EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc---------------------------------------------
Confidence 99999999999999999999999998743211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 177 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 211 (353)
T 2i0e_A 177 ---------------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 211 (353)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCccccChhhhcCCCcCCcccccchHHHH
Confidence 00114789999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....+. ++..+ +...+||.+||+.||.+||+ +.+|++||||+..
T Consensus 212 ~ell~G~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 212 YEMLAGQAPFEGEDED-ELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 99999 77665444 344444433221 22233 44559999999999999994 6999999999876
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=302.32 Aligned_cols=208 Identities=17% Similarity=0.280 Sum_probs=165.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... ..|+|||| .|++|.+++.+. .+++..+..++.||+.||.|||++||
T Consensus 89 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~i 162 (321)
T 2c30_A 89 LFNEVVIMRDYQHFNVVEMYK-SYLVGE---ELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGV 162 (321)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEEECC---EEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 554443 57999999 899999998543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++........
T Consensus 163 vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 196 (321)
T 2c30_A 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP---------------------------------------------- 196 (321)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC----------------------------------------------
T ss_pred ecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 197 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ 232 (321)
T 2c30_A 197 --------------------------------------------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVI 232 (321)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHH
Confidence 001146899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCc-ccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++ ||...... ..+..+.....+. ..... .+...+|+.+||+.||.+|||+.|+|+||||....
T Consensus 233 el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 233 EMVDGEPPYFSDSPV-QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHHHSSCTTTTSCHH-HHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHHhCCCCCCCCCHH-HHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence 9999 66655443 3344444433222 11222 34455999999999999999999999999998753
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=308.83 Aligned_cols=210 Identities=17% Similarity=0.205 Sum_probs=157.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.... .+|+||||.+++|.+++.... .+++..++.|+.||+.||.|||++||
T Consensus 79 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~i 153 (329)
T 3gbz_A 79 TAIREVSLLKELQHRNIIELKS-VIHHNH---RLHLIFEYAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRC 153 (329)
T ss_dssp -CHHHHHHGGGCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHcCCCCcceEEE-EEecCC---EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 3447888999999999999999 555443 689999996679999996544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEc-----cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 143 VVHNVRPSCFVMS-----SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~-----~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++ ..+.+||+|||++...+....
T Consensus 154 vH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------- 192 (329)
T 3gbz_A 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR----------------------------------------- 192 (329)
T ss_dssp CCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC---------------------------------------------
T ss_pred ECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc-----------------------------------------
Confidence 9999999999995 445599998888743211100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwS 296 (720)
.....+||+.|+|||++.+.. ++.++||||
T Consensus 193 -------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws 223 (329)
T 3gbz_A 193 -------------------------------------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWS 223 (329)
T ss_dssp --------------------------------------------------------CCTTCCHHHHTTCCCCCTHHHHHH
T ss_pred -------------------------------------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHH
Confidence 001146799999999998755 899999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCcc---------------------------ccc-cCchHHHHHHHcC
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---------------------------LLL-KFPKEASFCLWLL 345 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---------------------------~~~-~~p~~~~Li~~~L 345 (720)
|||++|||++ ||............+.....|+. +.. ..+...+||.+||
T Consensus 224 lG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 303 (329)
T 3gbz_A 224 IACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAML 303 (329)
T ss_dssp HHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHc
Confidence 9999999999 67665554333333221111110 000 1234459999999
Q ss_pred CCCCCCCCChHHHHcCcccCCC
Q 004989 346 HPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++||.+|||+.|+|+||||+..
T Consensus 304 ~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 304 EMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp CSSGGGSCCHHHHHTSGGGSSS
T ss_pred cCChhhCCCHHHHhCCcccCCC
Confidence 9999999999999999999975
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=320.10 Aligned_cols=207 Identities=18% Similarity=0.212 Sum_probs=164.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 67 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ 141 (486)
T 3mwu_A 67 TILREVELLKKLDHPNIMKLFE-ILEDSS---SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHN 141 (486)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcCeEEE-EEEcCC---EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 565543 68999999 8999999985443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++ .++.+||+|||++.......
T Consensus 142 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 178 (486)
T 3mwu_A 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT------------------------------------------- 178 (486)
T ss_dssp CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--------------------------------------------
T ss_pred eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC-------------------------------------------
Confidence 99999999999995 45679999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+. |+.++||||||
T Consensus 179 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG 209 (486)
T 3mwu_A 179 ------------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAG 209 (486)
T ss_dssp ---------------------------------------------------CCTTGGGGCCGGGGGSC-CCHHHHHHHHH
T ss_pred ------------------------------------------------ccCCCcCCCCCCCHHHhCCC-CCchhhHHHHH
Confidence 00114689999999999875 99999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+.++ +.+....+...+||.+||++||.+|||+.++|+||||+..
T Consensus 210 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 210 VILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence 99999999 67665444 344444444332 2223334455699999999999999999999999999865
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=299.36 Aligned_cols=225 Identities=16% Similarity=0.139 Sum_probs=153.3
Q ss_pred hhhchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 61 ~~r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+..+|...+..+ +||||+++++ ++.+.. .+++|||| .|++|.+++... ...+++.+++.++.||+.||.
T Consensus 54 ~~~~~~e~~~~~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~ 129 (289)
T 1x8b_A 54 EQNALREVYAHAVLGQHSHVVRYFS-AWAEDD---HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129 (289)
T ss_dssp HHHHHHHHHHHHHSCSCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCeeeeee-eeecCC---eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHH
Confidence 33445777788887 9999999999 554443 67999999 789999999442 245899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+|||++.++...+.+.... ..++......++++|||.+..
T Consensus 130 ~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~kl~Dfg~~~~ 183 (289)
T 1x8b_A 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGD--------------------------EDDWASNKVMFKIGDLGHVTR 183 (289)
T ss_dssp HHHHTTEECSCCSGGGEEEC----------------------------------------------CCCEEECCCTTCEE
T ss_pred HHHhCCEeecCCCHHHEEEcCCCCCcccccccc--------------------------cccccCCceEEEEcccccccc
Confidence 999999999999999999997664333221110 001111122344555554432
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDI 294 (720)
.... ....||+.|+|||++.+. .++.++||
T Consensus 184 ~~~~-------------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~Di 214 (289)
T 1x8b_A 184 ISSP-------------------------------------------------QVEEGDSRFLANEVLQENYTHLPKADI 214 (289)
T ss_dssp TTCS-------------------------------------------------CCCCCCGGGCCHHHHTTCCTTHHHHHH
T ss_pred cCCc-------------------------------------------------cccCCCccccChhHhcCCCCCCchhhH
Confidence 1100 013579999999999876 47789999
Q ss_pred hhhhchhhhccc--cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 295 YRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt--pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|+|++ |+..... ....+.....+.......+...+|+.+||++||.+|||+.|+|+||||...
T Consensus 215 ~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 215 FALALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 999999999999 3332222 233344444433322333455699999999999999999999999999875
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=323.94 Aligned_cols=207 Identities=17% Similarity=0.262 Sum_probs=166.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++.+. ..+++.+++.++.||+.||.|||++|
T Consensus 62 ~~~~Ei~~l~~l~HpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 136 (476)
T 2y94_A 62 KIRREIQNLKLFRHPHIIKLYQ-VISTPS---DIFMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHM 136 (476)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447888999999999999999 555543 57999999 799999999554 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...... .+
T Consensus 137 ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~----------------------------------~~----------- 171 (476)
T 2y94_A 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----------------------------------EF----------- 171 (476)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCSSCEECCTT----------------------------------CC-----------
T ss_pred CCcccccHHHEEEecCCCeEEEeccchhhcccc----------------------------------cc-----------
Confidence 999999999999999999999999887432110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
....+||+.|+|||++.+..+ +.++|||||||+
T Consensus 172 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvi 205 (476)
T 2y94_A 172 ----------------------------------------------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVI 205 (476)
T ss_dssp ----------------------------------------------BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCcCeEChhhccCCCCCCCcceehhhHHH
Confidence 011468999999999998875 789999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||...... .....+..+.+.. .....+...+||.+||+.||.+|||+.|+++||||+..
T Consensus 206 l~elltG~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 206 LYALLCGTLPFDDDHVP-TLFKKICDGIFYT-PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHHSSCSSCCSSSH-HHHHHHHTTCCCC-CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHhcCCcCC-CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 999999 67655443 3444444443321 11223455699999999999999999999999999864
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=315.27 Aligned_cols=220 Identities=15% Similarity=0.158 Sum_probs=165.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|+||||.+++|.+++... .+++.+++.|+.||+.||.|||++
T Consensus 71 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~ 147 (364)
T 3qyz_A 71 RTLREIKILLRFRHENIIGIND-IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA 147 (364)
T ss_dssp HHHHHHHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcccee-EEecCCccccceEEEEEcccCcCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4458888999999999999999 44332 233468999999778999999653 399999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||.+....... +.
T Consensus 148 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------------------------~~---------- 184 (364)
T 3qyz_A 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH---------------------------------DH---------- 184 (364)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG---------------------------------CB----------
T ss_pred CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC---------------------------------Cc----------
Confidence 99999999999999999999999999884321110 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
.......+||++|+|||++.+.. ++.++|||||||
T Consensus 185 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 220 (364)
T 3qyz_A 185 --------------------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220 (364)
T ss_dssp --------------------------------------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHH
T ss_pred --------------------------------------------cccccccccccCCCCCHHhcCCCCCCcchhHHHHHH
Confidence 00001147899999999876544 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCC---------------------------ccc-cccCchHHHHHHHcCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLP---------------------------PQL-LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p---------------------------~~~-~~~~p~~~~Li~~~L~~ 347 (720)
++|+|++ ||............+.. +..+ ..+ ....+...+||.+||.+
T Consensus 221 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 300 (364)
T 3qyz_A 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF 300 (364)
T ss_dssp HHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCC
Confidence 9999999 67655433221111110 0000 001 12234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccchH
Q 004989 348 EPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
||.+|||+.|+|+||||+....+..
T Consensus 301 dP~~R~t~~e~l~hp~~~~~~~~~~ 325 (364)
T 3qyz_A 301 NPHKRIEVEQALAHPYLEQYYDPSD 325 (364)
T ss_dssp STTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred ChhhCCCHHHHhcCcchhhccCccc
Confidence 9999999999999999998755443
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-34 Score=306.31 Aligned_cols=203 Identities=24% Similarity=0.337 Sum_probs=160.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++.+.. .+++|||| .+ .+|.+++.... .+++..++.|+.||+.||.|||++
T Consensus 75 ~~~~E~~~l~~l~h~~Iv~~~~-~~~~~~---~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~ 149 (335)
T 3dls_A 75 KVTLEIAILSRVEHANIIKVLD-IFENQG---FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK 149 (335)
T ss_dssp EEEHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEeeCC---EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4447888999999999999999 555543 67999998 44 49999996554 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++.......
T Consensus 150 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--------------------------------------------- 184 (335)
T 3dls_A 150 DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK--------------------------------------------- 184 (335)
T ss_dssp TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC---------------------------------------------
T ss_pred CeEEeccCHHHEEEcCCCcEEEeecccceECCCCC---------------------------------------------
Confidence 99999999999999999999999998874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..+ +.++|||||||
T Consensus 185 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 218 (335)
T 3dls_A 185 ----------------------------------------------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGV 218 (335)
T ss_dssp ----------------------------------------------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHH
T ss_pred ----------------------------------------------ceeccCCCccccChhhhcCCCCCCCcccchhHHH
Confidence 0011468999999999998876 88999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||..... .+.....++. ...+...+||.+||++||.+|||+.++|+||||+....
T Consensus 219 il~el~~g~~pf~~~~~------~~~~~~~~~~--~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 283 (335)
T 3dls_A 219 TLYTLVFEENPFCELEE------TVEAAIHPPY--LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283 (335)
T ss_dssp HHHHHHHSSCSCSSGGG------GTTTCCCCSS--CCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred HHHHHHhCCCchhhHHH------HHhhccCCCc--ccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCcc
Confidence 9999999 5544221 1111111211 12344569999999999999999999999999988643
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-35 Score=309.04 Aligned_cols=216 Identities=18% Similarity=0.289 Sum_probs=167.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.+..........|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 58 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (311)
T 3ork_A 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG 136 (311)
T ss_dssp HHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4558888999999999999999444444433456999999 7899999995443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 137 ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 172 (311)
T 3ork_A 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS-------------------------------------------- 172 (311)
T ss_dssp CCCCCCCGGGEEEETTSCEEECCCSCC-----------------------------------------------------
T ss_pred CCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc--------------------------------------------
Confidence 999999999999999999999999988433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........||+.|+|||++.+..++.++|||||||++
T Consensus 173 -------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 209 (311)
T 3ork_A 173 -------------------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209 (311)
T ss_dssp ----------------------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHH
Confidence 0000114689999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|||++ ||............+.....++.. ...++ ...+||.+||+.||.+||++.++|.|+|++.
T Consensus 210 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 210 YEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 99999 777766655555555555444432 23344 4459999999999999999999999999764
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-34 Score=313.76 Aligned_cols=217 Identities=16% Similarity=0.151 Sum_probs=154.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--------CCCCCCHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--------~~~~l~~~~~~~i~~QIl~aL 134 (720)
+..+|..+|.+++|||||++++ ++.... ...+|+||||.+++|.+++.. ....+++..++.|+.||+.||
T Consensus 64 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al 141 (405)
T 3rgf_A 64 SACREIALLRELKHPNVISLQK-VFLSHA-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 141 (405)
T ss_dssp HHHHHHHHHHHCCCTTBCCCCE-EEEETT-TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeeeEee-EEecCC-CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 443322 236899999977899998831 122489999999999999999
Q ss_pred HHHHHCCceeccCCCCcEEE----ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 135 YAAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
.|||++||+||||||+|||+ +.++.+||+|||++...+..... .
T Consensus 142 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~ 189 (405)
T 3rgf_A 142 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L 189 (405)
T ss_dssp HHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-----------------------------------------
T ss_pred HHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc--------------------------------c
Confidence 99999999999999999999 67789999999988543211000 0
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CC
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VS 289 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s 289 (720)
......+||++|+|||++.+.. ++
T Consensus 190 -------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 214 (405)
T 3rgf_A 190 -------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYT 214 (405)
T ss_dssp --------------------------------------------------------------CCCTTCCHHHHTTCCSCC
T ss_pred -------------------------------------------------------ccCCCceecCcccCchhhcCCCccc
Confidence 0001147899999999998854 89
Q ss_pred ccccchhhhchhhhccc---cCCCCchH--------HHHHHHhhc--CCCCcccc-------------------------
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLRH--RVLPPQLL------------------------- 331 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~--------~~~~~~l~~--~~~p~~~~------------------------- 331 (720)
.++|||||||++|||++ ||...... ...+..+.. +..+...+
T Consensus 215 ~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (405)
T 3rgf_A 215 KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCS 294 (405)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCC
T ss_pred chhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcch
Confidence 99999999999999999 66543221 011111110 00110000
Q ss_pred ----------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 332 ----------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 332 ----------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+...+||.+||++||.+|||+.|+|+||||....
T Consensus 295 ~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 295 LIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp HHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred hhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 0134456999999999999999999999999998763
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=311.46 Aligned_cols=220 Identities=15% Similarity=0.196 Sum_probs=164.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.+.... .....+|+||||.+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 75 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 154 (362)
T 3pg1_A 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG 154 (362)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 4458888999999999999999444332 334468999999778999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+.......
T Consensus 155 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 188 (362)
T 3pg1_A 155 VVHRDLHPGNILLADNNDITICDFNLAREDTADA---------------------------------------------- 188 (362)
T ss_dssp CCCCCCCGGGEEECTTCCEEECCTTC------------------------------------------------------
T ss_pred CEecCCChHHEEEcCCCCEEEEecCccccccccc----------------------------------------------
Confidence 9999999999999999999999998874211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
......||++|+|||++.+ ..++.++|||||||+
T Consensus 189 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 223 (362)
T 3pg1_A 189 ---------------------------------------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCV 223 (362)
T ss_dssp ----------------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHH
Confidence 0011467999999999987 558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC-------------------------CCCc----c-ccccCchHHHHHHHcCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHR-------------------------VLPP----Q-LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~-------------------------~~p~----~-~~~~~p~~~~Li~~~L~~ 347 (720)
+|+|++ ||............+... ..+. . .....+...+||.+||++
T Consensus 224 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 303 (362)
T 3pg1_A 224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303 (362)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcC
Confidence 999999 676654332222111100 0000 0 111234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccchHH
Q 004989 348 EPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
||.+|||+.|+|+||||+....+...
T Consensus 304 dP~~Rpt~~ell~hp~f~~~~~~~~~ 329 (362)
T 3pg1_A 304 NPQRRISTEQALRHPYFESLFDPLDL 329 (362)
T ss_dssp SGGGSCCHHHHHTSGGGTTTCCGGGG
T ss_pred ChhhCCCHHHHHcCchhhhccCcccc
Confidence 99999999999999999988665444
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=301.37 Aligned_cols=204 Identities=17% Similarity=0.225 Sum_probs=162.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .++++||| .+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 56 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i 130 (279)
T 3fdn_A 56 LRREVEIQSHLRHPNILRLYG-YFHDAT---RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRV 130 (279)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHcCCCCCCcchhh-eEecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 346788999999999999999 555543 57999999 8899999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......
T Consensus 131 ~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~------------------------------------------------ 162 (279)
T 3fdn_A 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------------------------------------ 162 (279)
T ss_dssp EECCCCGGGEEECTTSCEEECSCCEESCC---------------------------------------------------
T ss_pred ecccCChHhEEEcCCCCEEEEeccccccCCcc------------------------------------------------
Confidence 99999999999999999999999877322110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 163 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 198 (279)
T 3fdn_A 163 --------------------------------------------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198 (279)
T ss_dssp -------------------------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHH
Confidence 001136799999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||...... .....+.....+ ++... +...+||.+||++||.+|||+.|+|+||||+..
T Consensus 199 ~l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~ 264 (279)
T 3fdn_A 199 EFLVGKPPFEANTYQ-ETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264 (279)
T ss_dssp HHHHSSCTTCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHCCCCCCCCcHH-HHHHHHHhCCCC--CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCC
Confidence 9999 66654433 333333332211 12223 344599999999999999999999999999865
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=308.28 Aligned_cols=207 Identities=18% Similarity=0.246 Sum_probs=161.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 67 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ 141 (327)
T 3a62_A 67 HTKAERNILEEVKHPFIVDLIY-AFQTGG---KLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKG 141 (327)
T ss_dssp ----HHHHHHHCCCTTBCCEEE-EEECSS---CEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCccceeE-EEEcCC---EEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446778999999999999999 555543 67999999 8899999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... .
T Consensus 142 ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 176 (327)
T 3a62_A 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------------------------T------------ 176 (327)
T ss_dssp CCCCCCCTTTEEECTTSCEEECCCSCC-----------------------------------------------------
T ss_pred EEcccCCHHHeEECCCCcEEEEeCCcccccccCC---------------------------------c------------
Confidence 9999999999999999999999999874321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 177 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 211 (327)
T 3a62_A 177 ---------------------------------------------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211 (327)
T ss_dssp -----------------------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHH
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....++ ++... +...+||.+||..||.+|| ++.|+++||||+..
T Consensus 212 ~el~~g~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 212 YDMLTGAPPFTGENRK-KTIDKILKCKLN--LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HHHHHSSCSCCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 99999 67665444 333333332211 11223 4455999999999999999 88999999999876
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-34 Score=309.05 Aligned_cols=203 Identities=16% Similarity=0.221 Sum_probs=153.1
Q ss_pred hhhhhhcccCC-----CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGD-----HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 65 ~~e~~~L~~l~-----HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+|..+|..+. |||||++++ ++.... .+|+||||.+++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 79 ~~e~~~l~~l~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 154 (360)
T 3llt_A 79 KIEADILKKIQNDDINNNNIVKYHG-KFMYYD---HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR 154 (360)
T ss_dssp HHHHHHHHHTCCCSTTGGGBCCEEE-EEEETT---EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCCCCeecccc-eeeECC---eeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 35666777665 999999999 554443 6899999999999999944 3345999999999999999999999
Q ss_pred HCCceeccCCCCcEEEcc-------------------------CCceEEeecCcccCCCCCCcccccccccccccCCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSS-------------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~-------------------------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (720)
++||+||||||+|||++. ++.+||+|||++......
T Consensus 155 ~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~------------------- 215 (360)
T 3llt_A 155 KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY------------------- 215 (360)
T ss_dssp HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-------------------
T ss_pred HCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-------------------
Confidence 999999999999999975 556666666655211000
Q ss_pred CchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc
Q 004989 194 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 273 (720)
Q Consensus 194 ~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G 273 (720)
.....|
T Consensus 216 --------------------------------------------------------------------------~~~~~g 221 (360)
T 3llt_A 216 --------------------------------------------------------------------------HGSIIN 221 (360)
T ss_dssp --------------------------------------------------------------------------CCSCCS
T ss_pred --------------------------------------------------------------------------CcCccC
Confidence 011468
Q ss_pred CCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhc--CCCCcccc-----------------
Q 004989 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLL----------------- 331 (720)
Q Consensus 274 T~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~----------------- 331 (720)
|+.|+|||++.+..++.++|||||||++|||++ ||........ ...+.. ..+|+...
T Consensus 222 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 300 (360)
T 3llt_A 222 TRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH-LAMMESIIQPIPKNMLYEATKTNGSKYVNKDEL 300 (360)
T ss_dssp CGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTT
T ss_pred cccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHH-HHHHHHhcCCCCHHHHhhhhhccCccccCcccc
Confidence 999999999999999999999999999999999 7766543322 211111 11111100
Q ss_pred --------------------------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 332 --------------------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 332 --------------------------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
...+...+||.+||++||.+|||+.|+|+||||+
T Consensus 301 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 301 KLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp EECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred eecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 0113344999999999999999999999999995
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=306.29 Aligned_cols=210 Identities=20% Similarity=0.267 Sum_probs=148.8
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|..+. ||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.|+.||+.||.|||++
T Consensus 51 ~~~~e~~~l~~l~~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~ 125 (325)
T 3kn6_A 51 NTQKEITALKLCEGHPNIVKLHE-VFHDQL---HTFLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDV 125 (325)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhcCCCCeeEEEE-EEEcCC---EEEEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447777888887 999999999 555543 67999999 889999999654 3599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 141 GIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++.++ .+||+|||++........
T Consensus 126 ~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------- 164 (325)
T 3kn6_A 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ----------------------------------------- 164 (325)
T ss_dssp TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------------------------------------------
T ss_pred CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-----------------------------------------
Confidence 999999999999998766 799998888743211100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 165 -------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Diwsl 195 (325)
T 3kn6_A 165 -------------------------------------------------PLKTPCFTLHYAAPELLNQNGYDESCDLWSL 195 (325)
T ss_dssp --------------------------------------------------------------------CCCCHHHHHHHH
T ss_pred -------------------------------------------------cccccCCCcCccCHHHhcCCCCCCccchHHH
Confidence 0011467999999999999889999999999
Q ss_pred hchhhhccc---cCCCCc------hHHHHHHHhhcCCCC--ccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 298 GVLLFELFC---PFSTGE------EKTRTMSSLRHRVLP--PQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~------~~~~~~~~l~~~~~p--~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
||++|+|++ ||.... .....+..+..+.++ ..... ..+...+||.+||++||.+|||+.|+++||||+
T Consensus 196 G~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~ 275 (325)
T 3kn6_A 196 GVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ 275 (325)
T ss_dssp HHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGC
T ss_pred HHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhc
Confidence 999999999 665432 123445555544332 22222 334455999999999999999999999999998
Q ss_pred CC
Q 004989 366 EP 367 (720)
Q Consensus 366 ~~ 367 (720)
..
T Consensus 276 ~~ 277 (325)
T 3kn6_A 276 DG 277 (325)
T ss_dssp TT
T ss_pred cC
Confidence 75
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=319.79 Aligned_cols=207 Identities=15% Similarity=0.198 Sum_probs=163.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 82 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 156 (494)
T 3lij_A 82 KLLEEVAVLKLLDHPNIMKLYD-FFEDKR---NYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHN 156 (494)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447888999999999999999 665543 57999999 8999999985443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC---CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~---~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.. +.+||+|||++.......
T Consensus 157 ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~------------------------------------------- 193 (494)
T 3lij_A 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK------------------------------------------- 193 (494)
T ss_dssp EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-------------------------------------------
T ss_pred ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-------------------------------------------
Confidence 9999999999999764 459999888873321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||++|+|||++.+ .|+.++||||||
T Consensus 194 ------------------------------------------------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG 224 (494)
T 3lij_A 194 ------------------------------------------------KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIG 224 (494)
T ss_dssp ------------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCeeCHHHHcc-cCCCchhHHHHH
Confidence 0011478999999999875 599999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCC--Ccccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..... +.... ...+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 225 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 225 VILFILLAGYPPFGGQTDQ-EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 99999999 67665444 34444444332 22222 333455699999999999999999999999999764
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=312.43 Aligned_cols=213 Identities=20% Similarity=0.241 Sum_probs=158.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|+||||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 70 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~ 145 (371)
T 2xrw_A 70 RAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 145 (371)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSCCSTTTCCEEEEEEECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCccceEE-eeccccccccccceEEEEEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 444332 2336899999977799999853 38999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...+...
T Consensus 146 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 181 (371)
T 2xrw_A 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 181 (371)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECCCCC----------------------------------------------------
T ss_pred CCeecccCCHHHEEEcCCCCEEEEEeeccccccccc--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..++.++|||||||
T Consensus 182 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 214 (371)
T 2xrw_A 182 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214 (371)
T ss_dssp -------------------------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred -----------------------------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHH
Confidence 001146899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC-cccc-------------------------------c--------cCch
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLL-------------------------------L--------KFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~-------------------------------~--------~~p~ 336 (720)
++|||++ ||............+.....| +.+. + ..+.
T Consensus 215 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (371)
T 2xrw_A 215 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 294 (371)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHH
Confidence 9999999 777655443322222211111 0000 0 0123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+||.+||.+||.+|||+.|+|+||||+...++
T Consensus 295 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 328 (371)
T 2xrw_A 295 ARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 328 (371)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCH
T ss_pred HHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCc
Confidence 4599999999999999999999999999876554
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=294.57 Aligned_cols=207 Identities=18% Similarity=0.272 Sum_probs=163.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 52 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~ 126 (277)
T 3f3z_A 52 RFKQEIEIMKSLDHPNIIRLYE-TFEDNT---DIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLN 126 (277)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecCC---eEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447788999999999999999 555443 57999999 7899999995443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEE---ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||++ +.++.++|+|||.+.......
T Consensus 127 i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~------------------------------------------- 163 (277)
T 3f3z_A 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK------------------------------------------- 163 (277)
T ss_dssp EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-------------------------------------------
T ss_pred ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-------------------------------------------
Confidence 9999999999999 788899999998874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 164 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG 194 (277)
T 3f3z_A 164 ------------------------------------------------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAG 194 (277)
T ss_dssp ------------------------------------------------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHH
T ss_pred ------------------------------------------------chhccCCCCCccChHHhccc-CCchhhehhHH
Confidence 00113689999999999765 89999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCC--Ccccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..... +.... ...+...+||.+||++||.+|||+.++|+||||+..
T Consensus 195 ~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 268 (277)
T 3f3z_A 195 VMMYVLLCGYPPFSAPTDS-EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268 (277)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence 99999999 67665544 33333433322 22222 233455699999999999999999999999999764
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=313.95 Aligned_cols=214 Identities=17% Similarity=0.258 Sum_probs=163.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++..... ...+|+||||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 87 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~ 162 (371)
T 4exu_A 87 RAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHS 162 (371)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSSTTCCCCEEEEECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCchhhhh-heeccCCcccceeEEEEEccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 5544332 223599999977899998832 39999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+..
T Consensus 163 ~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~--------------------------------------------- 197 (371)
T 4exu_A 163 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--------------------------------------------- 197 (371)
T ss_dssp TTCCCSCCCGGGEEECTTCCEEECSTTCC---------------------------------------------------
T ss_pred CCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---------------------------------------------
Confidence 99999999999999999999999999887432110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....||++|+|||++.+ ..++.++||||||
T Consensus 198 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (371)
T 4exu_A 198 ------------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 229 (371)
T ss_dssp --------------------------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHH
Confidence 011467999999999987 5689999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCC-cc----------------------------ccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQ----------------------------LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~----------------------------~~~~~p~~~~Li~~~L~ 346 (720)
|++|+|++ ||............+.....+ .. +....+...+||.+||+
T Consensus 230 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (371)
T 4exu_A 230 CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309 (371)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCC
Confidence 99999999 676654433222222111111 00 11223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchHH
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
+||.+|||+.|+|+||||+....+..+
T Consensus 310 ~dP~~Rpt~~ell~hp~f~~~~~~~~~ 336 (371)
T 4exu_A 310 LDVDKRLTAAQALTHPFFEPFRDPEEE 336 (371)
T ss_dssp SCTTTSCCHHHHHTSGGGTTTCCGGGC
T ss_pred CChhhcCCHHHHhcCcccccCCCcccc
Confidence 999999999999999999987554433
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=300.77 Aligned_cols=207 Identities=19% Similarity=0.217 Sum_probs=154.8
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC-C
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-G 141 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~-g 141 (720)
.+...+..++||||+++++ ++.++. .+|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++ |
T Consensus 55 ~~~~~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~ 130 (290)
T 3fme_A 55 DLDISMRTVDCPFTVTFYG-ALFREG---DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 130 (290)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEECSS---SEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCeEEEEee-eeeccC---CEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4444578899999999999 554443 5799999966799888732 455699999999999999999999998 9
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+.......
T Consensus 131 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 164 (290)
T 3fme_A 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV---------------------------------------------- 164 (290)
T ss_dssp CCCCCCSGGGCEECTTCCEEBCCC--------------------------------------------------------
T ss_pred eecCCCCHHHEEECCCCCEEEeecCCcccccccc----------------------------------------------
Confidence 9999999999999999999999998874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc----cCCCCCccccchhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRL 297 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++ .+..++.++|||||
T Consensus 165 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~sl 199 (290)
T 3fme_A 165 ---------------------------------------------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199 (290)
T ss_dssp --------------------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccChhhcChhhcCcCCCcHHHHHHH
Confidence 00013579999999996 45558999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||..................+......++ ...+|+.+||++||.+|||+.|+++||||+..
T Consensus 200 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 200 GITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp HHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 999999999 77654443333333333333333333334 45599999999999999999999999999864
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=316.87 Aligned_cols=208 Identities=21% Similarity=0.246 Sum_probs=157.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 186 ~~~~E~~~l~~l~hpniv~l~~-~~~~~----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ 259 (419)
T 3i6u_A 186 NVETEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG 259 (419)
T ss_dssp CHHHHHHHHHHCCCTTBCCCCE-EEESS----EEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecC----ceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3457888999999999999999 55443 47999999 899999998544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++..+ .+||+|||++...+...
T Consensus 260 ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 296 (419)
T 3i6u_A 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------------------------------------------- 296 (419)
T ss_dssp CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC----------------------------------------------
T ss_pred ccccCCChHhEEEecCCCcceEEEeecccceecCCCc-------------------------------------------
Confidence 99999999999997544 49999888874432110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccccch
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIw 295 (720)
.....+||+.|+|||++.+ ..++.++|||
T Consensus 297 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diw 328 (419)
T 3i6u_A 297 ------------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 328 (419)
T ss_dssp --------------------------------------------------------CTTCCTTTTC----CTTHHHHHHH
T ss_pred ------------------------------------------------cccccCCCCCccCceeeecCCCCCCCchhhhH
Confidence 0011468999999999864 4588999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||............+.... +++...... +...+||.+||++||.+|||+.|+|+||||+..
T Consensus 329 slG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 329 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp HHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred hHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 99999999999 6655433222333333332 223333333 445599999999999999999999999999874
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=305.90 Aligned_cols=212 Identities=13% Similarity=0.158 Sum_probs=163.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..++.+++||||+++++ ++.... .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 58 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 133 (346)
T 1ua2_A 58 TALREIKLLQELSHPNIIGLLD-AFGHKS---NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 133 (346)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECCTT---CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhCCCCCCCeEEE-EEeeCC---ceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 3347888999999999999999 554443 569999996679999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...+....
T Consensus 134 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------- 167 (346)
T 1ua2_A 134 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR---------------------------------------------- 167 (346)
T ss_dssp CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC----------------------------------------------
T ss_pred ECCCCCHHHEEEcCCCCEEEEecccceeccCCcc----------------------------------------------
Confidence 9999999999999999999999998854321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||++|+|||++.+.. ++.++|||||||++
T Consensus 168 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 203 (346)
T 1ua2_A 168 --------------------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL 203 (346)
T ss_dssp --------------------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------cCCcccccccccCchHhhCCCCCCchhhhHhHHHHH
Confidence 001146899999999997654 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc-CCCCcc------------------------cccc-CchHHHHHHHcCCCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH-RVLPPQ------------------------LLLK-FPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~------------------------~~~~-~p~~~~Li~~~L~~dP~~R 352 (720)
|||++ ||............+.. +..++. .... .+...+||.+||+.||.+|
T Consensus 204 ~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 283 (346)
T 1ua2_A 204 AELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCAR 283 (346)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTS
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhC
Confidence 99999 45444433222222211 111000 0012 2345599999999999999
Q ss_pred CChHHHHcCcccCCCc
Q 004989 353 PKMGELLQSEFLNEPR 368 (720)
Q Consensus 353 pta~eiL~hp~~~~~~ 368 (720)
||+.|+|+||||....
T Consensus 284 pt~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 284 ITATQALKMKYFSNRP 299 (346)
T ss_dssp CCHHHHHTSGGGTSSS
T ss_pred CCHHHHhcChhhhcCC
Confidence 9999999999998753
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-34 Score=295.40 Aligned_cols=214 Identities=13% Similarity=0.149 Sum_probs=164.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 125 (276)
T 2yex_A 51 NIKKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG 125 (276)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCceeeee-EEEcCC---EEEEEEEecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3346777899999999999999 554443 57999999 788999998543 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 126 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------- 161 (276)
T 2yex_A 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------------------------------------- 161 (276)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE--------------------------------------------
T ss_pred eeccCCChHHEEEccCCCEEEeeCCCccccCCCcch--------------------------------------------
Confidence 999999999999999999999999887432110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
. ......||+.|+|||++.+..+ +.++|||||||+
T Consensus 162 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i 197 (276)
T 2yex_A 162 ------------------------R--------------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 197 (276)
T ss_dssp ------------------------C--------------------CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHH
T ss_pred ------------------------h--------------------cccCCccccCccChHHHhcCCCCCCcchHHHHHHH
Confidence 0 0011468999999999988774 789999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||............+.... ..+......+...+||.+||+.||.+|||+.|+++||||+....
T Consensus 198 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 198 LTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 999999 6765443322333333222 22222233345569999999999999999999999999998744
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-33 Score=317.87 Aligned_cols=209 Identities=18% Similarity=0.237 Sum_probs=165.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++++.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 92 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 166 (504)
T 3q5i_A 92 EIYNEISLLKSLDHPNIIKLFD-VFEDKK---YFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHN 166 (504)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 665543 68999999 8999999995443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 167 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 203 (504)
T 3q5i_A 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY------------------------------------------- 203 (504)
T ss_dssp EECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS-------------------------------------------
T ss_pred eEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC-------------------------------------------
Confidence 99999999999998776 69999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+ .++.++||||||
T Consensus 204 ------------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG 234 (504)
T 3q5i_A 204 ------------------------------------------------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCG 234 (504)
T ss_dssp ------------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCCCCHHHhcc-CCCchHHHHHHH
Confidence 0011468999999999875 499999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCC--cccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP--PQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p--~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++|+|++ ||...... .....+..+.+. ...+.. .+...+||.+||++||.+|||+.|+|+||||+....
T Consensus 235 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 310 (504)
T 3q5i_A 235 VIMYILLCGYPPFGGQNDQ-DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310 (504)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence 99999999 67665444 444455444332 222233 344559999999999999999999999999987644
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-34 Score=313.87 Aligned_cols=211 Identities=17% Similarity=0.215 Sum_probs=154.9
Q ss_pred hhhhhc-ccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 66 SDGVEL-THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 66 ~e~~~L-~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+|..++ ...+||||+++++.+.........+|+|||| .|++|.++|... ...+++.+++.|+.||+.||.|||++||
T Consensus 103 ~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 182 (400)
T 1nxk_A 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182 (400)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 444454 4468999999999433222223368999999 889999999654 3459999999999999999999999999
Q ss_pred eeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 143 VVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++. ++.+||+|||+++......
T Consensus 183 vHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-------------------------------------------- 218 (400)
T 1nxk_A 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-------------------------------------------- 218 (400)
T ss_dssp ECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------------------------------------------
T ss_pred cccCcCcceEEEecCCCCccEEEEecccccccCCCC--------------------------------------------
Confidence 99999999999997 7889999988874321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 219 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 251 (400)
T 1nxk_A 219 -----------------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 251 (400)
T ss_dssp -------------------------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHH
T ss_pred -----------------------------------------------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHH
Confidence 001147899999999999888999999999999
Q ss_pred hhhhccc---cCCCCchHH---HHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKT---RTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~---~~~~~l~~~--~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||....... .....+..+ .++......+ +...+||.+||+.||.+|||+.|+|+||||...
T Consensus 252 il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 252 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp HHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred HHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 9999999 665432210 112222222 2232222333 445599999999999999999999999999865
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=327.56 Aligned_cols=206 Identities=15% Similarity=0.223 Sum_probs=164.8
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++|||||++++ ++++.. .+|+|||| .|++|.+++...+ ..+++..++.|+.||+.||.|||++||
T Consensus 232 ~~E~~iL~~l~hp~Iv~l~~-~~~~~~---~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI 307 (576)
T 2acx_A 232 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307 (576)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHcCCCCEeeEEE-EEeeCC---EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 36778999999999999999 555543 68999999 8999999995533 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.+|++||+|||++.......
T Consensus 308 vHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----------------------------------------------- 340 (576)
T 2acx_A 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------------------------------------- 340 (576)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred eccCCchheEEEeCCCCeEEEecccceecccCc-----------------------------------------------
Confidence 999999999999999999999998874321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..|+.++|||||||++|
T Consensus 341 --------------------------------------------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvily 376 (576)
T 2acx_A 341 --------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376 (576)
T ss_dssp --------------------------------------------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHH
Confidence 001147899999999999988999999999999999
Q ss_pred hccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||.... ........+... +..++..+ +...+||.+||++||.+|| ++.|+++||||+..
T Consensus 377 eLltG~~PF~~~~~~~~~~~i~~~i~~~--~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 377 EMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp HHHHSSCSSSCSSSCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred HHHhCCCCCcccccchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 9999 676542 122333333322 22222333 4455999999999999999 78999999999986
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-34 Score=304.02 Aligned_cols=210 Identities=19% Similarity=0.285 Sum_probs=162.9
Q ss_pred hhchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 62 ~r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+..+|..++..+ .||||+++++ ++.... .+|+|||| .|++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 73 ~~~~~e~~~l~~l~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH 148 (327)
T 3lm5_A 73 AEILHEIAVLELAKSCPRVINLHE-VYENTS---EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148 (327)
T ss_dssp HHHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCEEEEEE-EEEeCC---eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 3444777788877 5699999999 555443 57999999 88999999843 3456999999999999999999999
Q ss_pred HCCceeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 139 SQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++||+||||||+|||++. ++.+||+|||++...+...
T Consensus 149 ~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~---------------------------------------- 188 (327)
T 3lm5_A 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC---------------------------------------- 188 (327)
T ss_dssp HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--------------------------------------------
T ss_pred HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc----------------------------------------
Confidence 999999999999999987 7899999988874321110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
......||+.|+|||++.+..++.++|||
T Consensus 189 ---------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 217 (327)
T 3lm5_A 189 ---------------------------------------------------ELREIMGTPEYLAPEILNYDPITTATDMW 217 (327)
T ss_dssp --------------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHH
T ss_pred ---------------------------------------------------ccccccCCcCccCCeeecCCCCCchhhHH
Confidence 00114689999999999999999999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhc--CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||........ ...+.. ...++.....++ ...+||.+||++||.+|||++++|+||||+..
T Consensus 218 slG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~ 294 (327)
T 3lm5_A 218 NIGIIAYMLLTHTSPFVGEDNQET-YLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294 (327)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred HHHHHHHHHHhCCCCCCCCCchHH-HHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence 99999999999 7766554432 222222 222333333344 44599999999999999999999999999876
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-34 Score=334.72 Aligned_cols=205 Identities=16% Similarity=0.226 Sum_probs=164.7
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|..+ +||||+++++ ++++.. .+|+|||| .|++|.++|.+.+ .+++..++.|+.||+.||.|||++||
T Consensus 389 ~~E~~~l~~~~~~~~i~~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gI 463 (674)
T 3pfq_A 389 MVEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGI 463 (674)
T ss_dssp HHHHHHHTCTTCCTTBCCEEE-ECBCSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHHhccCCCeEEEEEE-EEEeCC---EEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3566677775 7999999999 555543 68999999 8999999996544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+||||+.++++||+|||+++......
T Consensus 464 iHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~----------------------------------------------- 496 (674)
T 3pfq_A 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----------------------------------------------- 496 (674)
T ss_dssp ECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-----------------------------------------------
T ss_pred EeccCChhhEEEcCCCcEEEeecceeeccccCC-----------------------------------------------
Confidence 999999999999999999999999874311100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+||+.|+|||++.+..|+.++|||||||+||
T Consensus 497 -------------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvily 533 (674)
T 3pfq_A 497 -------------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 533 (674)
T ss_dssp -------------------------------------------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccCCCcccCHhhhcCCCCCccceEechHHHHH
Confidence 0001257999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+....+. ++.. .+...+||.+||++||.+||++ +||++||||+..
T Consensus 534 elltG~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 534 EMLAGQAPFEGEDED-ELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHSSCCC--CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred HHHcCCCCCCCCCHH-HHHHHHHhCCCC--CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 9999 77765554 444444433221 1223 3445599999999999999997 999999999986
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=310.70 Aligned_cols=214 Identities=17% Similarity=0.179 Sum_probs=161.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..+|..++|||||++++.++.... ....+++||||.+++|.+.+. .....+++..++.|+.||+.||.|||+
T Consensus 80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 159 (394)
T 4e7w_A 80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159 (394)
T ss_dssp CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999995544332 233478999996667666552 234559999999999999999999999
Q ss_pred CCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+|||++ .++.+||+|||+++......
T Consensus 160 ~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~------------------------------------------- 196 (394)
T 4e7w_A 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE------------------------------------------- 196 (394)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC-------------------------------------------
Confidence 9999999999999999 78999999998874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
......||++|+|||++.+.. ++.++|||||
T Consensus 197 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 228 (394)
T 4e7w_A 197 ------------------------------------------------PNVSYICSRYYRAPELIFGATNYTTNIDIWST 228 (394)
T ss_dssp ------------------------------------------------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CCcccccCcCccCHHHHcCCCCCCcHHHHHHH
Confidence 001146899999999997764 8999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc------------------CCCCc--------cccc-cCchHHHHHHHcCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPP--------QLLL-KFPKEASFCLWLLHP 347 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~------------------~~~p~--------~~~~-~~p~~~~Li~~~L~~ 347 (720)
||++|||++ ||.+..........+.. ..+|. .+.. ..+...+||.+||++
T Consensus 229 G~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (394)
T 4e7w_A 229 GCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEY 308 (394)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCC
Confidence 999999999 77765544333222221 00110 0111 223455999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004989 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||+....
T Consensus 309 dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 309 TPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp SGGGSCCHHHHHTSGGGSTTTS
T ss_pred ChhhCCCHHHHhcChhhhhhcc
Confidence 9999999999999999998644
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=300.24 Aligned_cols=217 Identities=16% Similarity=0.199 Sum_probs=158.1
Q ss_pred hchhhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+ ++||||+++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 56 ~~~~E~~~l~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~ 130 (316)
T 2ac3_A 56 RVFREVEMLYQCQGHRNVLELIE-FFEEED---RFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNK 130 (316)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCeeeEEE-EEeeCC---EEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 44467778877 57999999999 555443 68999999 7899999995543 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++.++. +||+|||++.......... ..
T Consensus 131 ~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------~~------- 173 (316)
T 2ac3_A 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS------------------------------PI------- 173 (316)
T ss_dssp TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------------------------------------------------
T ss_pred CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc------------------------------cc-------
Confidence 9999999999999997776 9999998874321110000 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCAS 292 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~s 292 (720)
........+||+.|+|||++.+ ..++.++
T Consensus 174 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 207 (316)
T 2ac3_A 174 ----------------------------------------------STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207 (316)
T ss_dssp ------------------------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTH
T ss_pred ----------------------------------------------cccccccccCCcCccChHHhhcccccccCCCccc
Confidence 0000011468999999999975 4489999
Q ss_pred cchhhhchhhhccc---cCCCCch--------------HHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCC
Q 004989 293 DIYRLGVLLFELFC---PFSTGEE--------------KTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~--------------~~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~R 352 (720)
|||||||++|||++ ||..... .......+.... +|....... +...+||.+||++||.+|
T Consensus 208 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 287 (316)
T 2ac3_A 208 DLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287 (316)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred ccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhC
Confidence 99999999999999 6654321 122333343332 222222233 445599999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004989 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
||+.|+|+||||+..
T Consensus 288 ps~~e~l~hp~~~~~ 302 (316)
T 2ac3_A 288 LSAAQVLQHPWVQGC 302 (316)
T ss_dssp CCHHHHHHSTTCC--
T ss_pred CCHHHHhcChhhcCC
Confidence 999999999999975
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=309.30 Aligned_cols=213 Identities=16% Similarity=0.235 Sum_probs=161.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...+|++|||.+++|.+++.. .+++.+++.++.||+.||.|||+
T Consensus 69 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~ 144 (353)
T 3coi_A 69 RAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHS 144 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHhh-eEecccccccceeEEEEeccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 5544332 234699999977899887732 39999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.+||+|||.+...+..
T Consensus 145 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 179 (353)
T 3coi_A 145 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--------------------------------------------- 179 (353)
T ss_dssp TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------------------------------------------------
T ss_pred CCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---------------------------------------------
Confidence 99999999999999999999999999887332100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....||+.|+|||++.+ ..++.++||||||
T Consensus 180 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG 211 (353)
T 3coi_A 180 ------------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 211 (353)
T ss_dssp ----------------------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHH
Confidence 001367999999999987 5589999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-C----------------------------CCCccccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-R----------------------------VLPPQLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~----------------------------~~p~~~~~~~p~~~~Li~~~L~ 346 (720)
|++|+|++ ||............+.. + .++.......+...+||.+||+
T Consensus 212 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (353)
T 3coi_A 212 CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291 (353)
T ss_dssp HHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcC
Confidence 99999999 66654433222111110 0 0011111223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.++|+||||+....+..
T Consensus 292 ~dp~~Rpt~~e~l~hp~f~~~~~~~~ 317 (353)
T 3coi_A 292 LDVDKRLTAAQALTHPFFEPFRDPEE 317 (353)
T ss_dssp SCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred CCcccCCCHHHHhcCcchhhccCccc
Confidence 99999999999999999998755433
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=296.08 Aligned_cols=209 Identities=18% Similarity=0.240 Sum_probs=143.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+.. .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 57 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 132 (278)
T 3cok_A 57 RVQNEVKIHCQLKHPSILELYN-YFEDSN---YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132 (278)
T ss_dssp HHHHHHHHHTTBCCTTBCCEEE-EEECSS---EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeEeEEE-EEccCC---eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447788999999999999999 555543 67999999 789999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 133 i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 167 (278)
T 3cok_A 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE--------------------------------------------- 167 (278)
T ss_dssp EECSSCCGGGEEECTTCCEEECCCTTCEECC-------------------------------------------------
T ss_pred eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 202 (278)
T 3cok_A 168 ---------------------------------------------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMF 202 (278)
T ss_dssp ---------------------------------------------------------------------CTHHHHHHHHH
T ss_pred ---------------------------------------------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHH
Confidence 00013679999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++ ||....... ....+.... ...+... +...+||.+||+.||.+|||+.++|+||||....
T Consensus 203 ~~l~~g~~p~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 203 YTLLIGRPPFDTDTVKN-TLNKVVLAD--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHHSSCSSCCCSCC------CCSSC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHHhCCCCCCChhHHH-HHHHHhhcc--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 99999 665543321 111111111 1112223 3445999999999999999999999999998753
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=299.40 Aligned_cols=212 Identities=17% Similarity=0.198 Sum_probs=158.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 48 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~ 122 (311)
T 4agu_A 48 IALREIRMLKQLKHPNLVNLLE-VFRRKR---RLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHN 122 (311)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCccchhh-eeecCC---eEEEEEEeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3347888999999999999999 555443 57999999 778888877544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+....... +
T Consensus 123 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 157 (311)
T 4agu_A 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS---------------------------------D------------ 157 (311)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc---------------------------------c------------
Confidence 9999999999999999999999998874321110 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
......||++|+|||++.+ ..++.++|||||||+
T Consensus 158 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i 192 (311)
T 4agu_A 158 ---------------------------------------------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCV 192 (311)
T ss_dssp -----------------------------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHH
Confidence 0011367999999999987 458999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhh--cCC------------------CCc---------cccccCchHHHHHHHcCCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLR--HRV------------------LPP---------QLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~--~~~------------------~p~---------~~~~~~p~~~~Li~~~L~~d 348 (720)
+|+|++ ||.............. ... .+. .+....+...+|+.+||++|
T Consensus 193 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 272 (311)
T 4agu_A 193 FAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMD 272 (311)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCC
Confidence 999999 6665544322211111 010 000 01122233559999999999
Q ss_pred CCCCCChHHHHcCcccCCCcc
Q 004989 349 PSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~ 369 (720)
|.+|||+.|+|+||||+....
T Consensus 273 P~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 273 PTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp TTTSCCHHHHHTSGGGTTCC-
T ss_pred hhhcCCHHHHhcChHHHhccC
Confidence 999999999999999998744
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=297.69 Aligned_cols=213 Identities=17% Similarity=0.225 Sum_probs=163.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.... .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 62 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 137 (302)
T 2j7t_A 62 DYIVEIEILATCDHPYIVKLLG-AYYHDG---KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 137 (302)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECC----CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCEeeeee-eeeeCC---eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 4446778899999999999999 554443 57999999 899999998655556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++..... ..
T Consensus 138 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-----------------------------------~~----------- 171 (302)
T 2j7t_A 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK-----------------------------------TL----------- 171 (302)
T ss_dssp CCCCCCSGGGEEECTTSCEEECCCHHHHHHHH-----------------------------------HH-----------
T ss_pred cccCCCCHHHEEECCCCCEEEEECCCCccccc-----------------------------------cc-----------
Confidence 99999999999999999999998887621000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYR 296 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwS 296 (720)
. ......||+.|+|||++. +..++.++||||
T Consensus 172 -------------------------------------~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s 207 (302)
T 2j7t_A 172 -------------------------------------Q-------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS 207 (302)
T ss_dssp -------------------------------------H-------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHH
T ss_pred -------------------------------------c-------ccccccCChhhcCCeeeccccCCCCCCchhhhHHH
Confidence 0 001136899999999983 566899999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|||++|+|++ ||.......... .+.....+. .....++. ..+|+.+||+.||.+|||+.++++||||......
T Consensus 208 lG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~ 285 (302)
T 2j7t_A 208 LGITLIEMAQIEPPHHELNPMRVLL-KIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN 285 (302)
T ss_dssp HHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred HHHHHHHHhcCCCCCccCCHHHHHH-HHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccc
Confidence 9999999999 666554443333 333322222 22334444 4599999999999999999999999999987554
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=297.32 Aligned_cols=212 Identities=17% Similarity=0.277 Sum_probs=162.6
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..-+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||
T Consensus 54 ~~~~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH 128 (294)
T 4eqm_A 54 TLKRFEREVHNSSQLSHQNIVSMID-VDEEDD---CYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH 128 (294)
T ss_dssp HHHHHHHHHHHHTTCCBTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEE-eeeeCC---eEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 3345568889999999999999999 555443 67999999 8999999995543 4999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.+||+|||++.........
T Consensus 129 ~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 167 (294)
T 4eqm_A 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT----------------------------------------- 167 (294)
T ss_dssp HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----------------------------------------------
T ss_pred HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc-----------------------------------------
Confidence 999999999999999999999999999988433211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 168 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 199 (294)
T 4eqm_A 168 ------------------------------------------------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIG 199 (294)
T ss_dssp -------------------------------------------------------CCSSCCHHHHHTCCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccCccccCccccCHhHhcCCCCCchHhHHHHH
Confidence 00114689999999999999999999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCc--cccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~--~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|++|||++ ||............+.....+. .....+|.. .+++.+||++||.+||+..+.+.++|..
T Consensus 200 ~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 200 IVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 99999999 7777666555555554433221 223344444 4999999999999999555555555543
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=307.88 Aligned_cols=214 Identities=17% Similarity=0.195 Sum_probs=162.0
Q ss_pred hhhhhhcccCCCCCceecccceeecC----------------------------------CCCCcEEEEEecCCCCHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENE----------------------------------AAIDPFVHAIEWGDVSLRQW 110 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~----------------------------------~~~~~~~lv~E~~ggsL~~~ 110 (720)
.+|..+|..++|||||++++.++... .....+++||||.+++|.+.
T Consensus 48 ~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~ 127 (383)
T 3eb0_A 48 NRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127 (383)
T ss_dssp CHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHHHH
T ss_pred HHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHH
Confidence 37888999999999999999544322 22335899999966798888
Q ss_pred Hh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCccccccccccc
Q 004989 111 LD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNME 186 (720)
Q Consensus 111 L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~ 186 (720)
+. ..+..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 128 l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------- 196 (383)
T 3eb0_A 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----------- 196 (383)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-----------
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-----------
Confidence 73 3455699999999999999999999999999999999999998 68899999998874321110
Q ss_pred ccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCc
Q 004989 187 TKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM 266 (720)
Q Consensus 187 ~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~ 266 (720)
T Consensus 197 -------------------------------------------------------------------------------- 196 (383)
T 3eb0_A 197 -------------------------------------------------------------------------------- 196 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCcccCcccccCCC-CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCC-----------------
Q 004989 267 KQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV----------------- 325 (720)
Q Consensus 267 ~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~----------------- 325 (720)
......||+.|+|||++.+.. ++.++|||||||++|||++ ||............+....
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 276 (383)
T 3eb0_A 197 PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV 276 (383)
T ss_dssp CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--C
T ss_pred CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccc
Confidence 001146799999999998765 8999999999999999999 6766554433333222100
Q ss_pred -CCc--------cccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 326 -LPP--------QLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 326 -~p~--------~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|. .+....+ ...+||.+||++||.+|||+.|+|+||||+....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 277 RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred cCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 110 0112233 3459999999999999999999999999987533
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=312.89 Aligned_cols=197 Identities=16% Similarity=0.220 Sum_probs=151.3
Q ss_pred CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 004989 74 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152 (720)
Q Consensus 74 l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI 152 (720)
.+||||+++++ ++.... .+|+||||.+++|.+++... ...+++..++.|+.||+.||.|||++|||||||||+||
T Consensus 156 ~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NI 231 (429)
T 3kvw_A 156 DNTMNVIHMLE-NFTFRN---HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENI 231 (429)
T ss_dssp TSCSCBCCEEE-EEEETT---EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGE
T ss_pred cCCcCEEEEEe-ecccCC---eEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence 37889999999 554443 68999999778999999443 34599999999999999999999999999999999999
Q ss_pred EEccCCc--eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCC
Q 004989 153 VMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 230 (720)
Q Consensus 153 Ll~~~~~--vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~ 230 (720)
|++.++. +||+|||++...+..
T Consensus 232 Ll~~~~~~~vkL~DFG~a~~~~~~-------------------------------------------------------- 255 (429)
T 3kvw_A 232 LLKQQGRSGIKVIDFGSSCYEHQR-------------------------------------------------------- 255 (429)
T ss_dssp EESSTTSCCEEECCCTTCEETTCC--------------------------------------------------------
T ss_pred EEccCCCcceEEeecccceecCCc--------------------------------------------------------
Confidence 9998887 999988887321110
Q ss_pred ccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---c
Q 004989 231 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 307 (720)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---p 307 (720)
....+||+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 256 -------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~p 298 (429)
T 3kvw_A 256 -------------------------------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298 (429)
T ss_dssp -------------------------------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred -------------------------------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCC
Confidence 011468999999999999999999999999999999999 5
Q ss_pred CCCCchHHHHHHHhhc-CCCCccc-------------------------------------------------------c
Q 004989 308 FSTGEEKTRTMSSLRH-RVLPPQL-------------------------------------------------------L 331 (720)
Q Consensus 308 f~~~~~~~~~~~~l~~-~~~p~~~-------------------------------------------------------~ 331 (720)
|............+.. +..++.+ .
T Consensus 299 f~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 378 (429)
T 3kvw_A 299 LPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378 (429)
T ss_dssp SCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTT
T ss_pred CCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhcc
Confidence 6655443222222111 1111100 0
Q ss_pred -ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 332 -LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 -~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 379 ~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415 (429)
T ss_dssp TCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred ccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence 012345699999999999999999999999999976
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-34 Score=308.28 Aligned_cols=208 Identities=18% Similarity=0.194 Sum_probs=161.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++..+. .+|+|||| .|++|.+++.... .+++..+..++.||+.||.|||++
T Consensus 77 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~ 151 (360)
T 3eqc_A 77 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 151 (360)
T ss_dssp HHHHHHGGGGGCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEEEEeE-EEEECC---EEEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4458888999999999999999 554443 58999999 7899999995543 499999999999999999999996
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||++......
T Consensus 152 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 185 (360)
T 3eqc_A 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 185 (360)
T ss_dssp CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----------------------------------------------
T ss_pred CEEcCCccHHHEEECCCCCEEEEECCCCcccccc----------------------------------------------
Confidence 9999999999999999999999999876211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 186 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 219 (360)
T 3eqc_A 186 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 219 (360)
T ss_dssp ----------------------------------------------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHH
Confidence 0011468999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHH-----------------------------------------HHHHhhcCCCCccccccCc-
Q 004989 301 LFELFC---PFSTGEEKTR-----------------------------------------TMSSLRHRVLPPQLLLKFP- 335 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~-----------------------------------------~~~~l~~~~~p~~~~~~~p- 335 (720)
+|+|++ ||........ ....+.....+......++
T Consensus 220 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
T 3eqc_A 220 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL 299 (360)
T ss_dssp HHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCH
T ss_pred HHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccH
Confidence 999999 7765433211 1111112222222222233
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+||.+||++||.+|||+.|+|+||||+..
T Consensus 300 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 300 EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 44599999999999999999999999999864
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=311.57 Aligned_cols=214 Identities=16% Similarity=0.204 Sum_probs=161.0
Q ss_pred hhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..+|.+++|||||++++.++.... ...++++||||.+++|.+++. .....+++..++.|+.||+.||.|||+
T Consensus 95 ~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~ 174 (420)
T 1j1b_A 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174 (420)
T ss_dssp CHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999995544332 223467999997778887773 344569999999999999999999999
Q ss_pred CCceeccCCCCcEEEccC-CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+|||++.+ +.+||+|||+++......
T Consensus 175 ~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 211 (420)
T 1j1b_A 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE------------------------------------------- 211 (420)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred CCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC-------------------------------------------
Confidence 999999999999999955 568999888874321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
.....+||++|+|||++.+. .|+.++|||||
T Consensus 212 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 243 (420)
T 1j1b_A 212 ------------------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSA 243 (420)
T ss_dssp ------------------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHH
Confidence 00114789999999999775 59999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc------------------CCCCcc--------cccc-CchHHHHHHHcCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPPQ--------LLLK-FPKEASFCLWLLHP 347 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~------------------~~~p~~--------~~~~-~p~~~~Li~~~L~~ 347 (720)
||+||||++ ||............+.. ..+|.. +... .+...+||.+||++
T Consensus 244 G~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~ 323 (420)
T 1j1b_A 244 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 323 (420)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccC
Confidence 999999999 67665544333222221 001110 1112 23455999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004989 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||.....
T Consensus 324 dP~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 324 TPTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp SGGGSCCHHHHHTSGGGGGGGC
T ss_pred ChhHCCCHHHHhCCHhhccccc
Confidence 9999999999999999987643
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=303.56 Aligned_cols=218 Identities=18% Similarity=0.199 Sum_probs=164.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------------
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------------------------- 114 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------------------------- 114 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++...
T Consensus 74 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (345)
T 3hko_A 74 RIKTEVRLMKKLHHPNIARLYE-VYEDEQ---YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149 (345)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcceeeh-hhccCC---eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccc
Confidence 4447888999999999999999 555443 68999999 899999998410
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCC--ceEEeecCcccCCCCCCccccc
Q 004989 115 ------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 115 ------------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~ 180 (720)
...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||.+.........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~--- 226 (345)
T 3hko_A 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG--- 226 (345)
T ss_dssp HHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC---
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc---
Confidence 11246788999999999999999999999999999999998766 8999999987432110000
Q ss_pred ccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004989 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
.
T Consensus 227 ----------------------------~--------------------------------------------------- 227 (345)
T 3hko_A 227 ----------------------------E--------------------------------------------------- 227 (345)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------c---------------------------------------------------
Confidence 0
Q ss_pred cCCCCccccccccCCcccCcccccC--CCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCC-CC-cccccc
Q 004989 261 KQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LP-PQLLLK 333 (720)
Q Consensus 261 ~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~-~p-~~~~~~ 333 (720)
........||+.|+|||++.+ ..++.++|||||||++|||++ ||............+.... ++ +.....
T Consensus 228 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (345)
T 3hko_A 228 ----YYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303 (345)
T ss_dssp -----------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGS
T ss_pred ----cccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccC
Confidence 000011468999999999976 558999999999999999999 7776655544443333322 22 222223
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 334 ~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+...+||.+||.+||.+|||+.++|+||||+...+.
T Consensus 304 ~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDK 340 (345)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSSC
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChHh
Confidence 4455699999999999999999999999999987543
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-35 Score=318.72 Aligned_cols=203 Identities=12% Similarity=0.091 Sum_probs=149.7
Q ss_pred hhh---hhcccCCCCCceecccc------eeecCCC------------C--CcEEEEEecCCCCHHHHHhCCCC------
Q 004989 66 SDG---VELTHGDHLRNQGGLSG------VCENEAA------------I--DPFVHAIEWGDVSLRQWLDKPKR------ 116 (720)
Q Consensus 66 ~e~---~~L~~l~HpnIV~l~~~------~~~~~~~------------~--~~~~lv~E~~ggsL~~~L~~~~~------ 116 (720)
+|. .+|++++|||||++++. ++++... . ...|++|||.+|+|.+++...+.
T Consensus 122 ~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~ 201 (377)
T 3byv_A 122 EEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 201 (377)
T ss_dssp HHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTH
T ss_pred HHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccc
Confidence 555 67888899999999942 2332211 0 13789999988899999954322
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCch
Q 004989 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||++...+..
T Consensus 202 ~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------------------- 259 (377)
T 3byv_A 202 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---------------------- 259 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE----------------------
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc----------------------
Confidence 1334888899999999999999999999999999999999999999988887321100
Q ss_pred hhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004989 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 ~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~ 276 (720)
.....| +.
T Consensus 260 -----------------------------------------------------------------------~~~~~g-~~ 267 (377)
T 3byv_A 260 -----------------------------------------------------------------------VVSSVS-RG 267 (377)
T ss_dssp -----------------------------------------------------------------------EECCCC-TT
T ss_pred -----------------------------------------------------------------------ccCCCC-cC
Confidence 011467 99
Q ss_pred ccCcccccCC-----------CCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHH
Q 004989 277 YASPEELAGA-----------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCL 342 (720)
Q Consensus 277 Y~APE~l~~~-----------~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~ 342 (720)
|+|||++.+. .++.++|||||||++|||++ ||...... .....+.. ......+...+||.
T Consensus 268 y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~~~~-----~~~~~~~~~~~li~ 341 (377)
T 3byv_A 268 FEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL-GGSEWIFR-----SCKNIPQPVRALLE 341 (377)
T ss_dssp CCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------CCSGGGGS-----SCCCCCHHHHHHHH
T ss_pred ccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc-cchhhhhh-----hccCCCHHHHHHHH
Confidence 9999999887 79999999999999999999 55432211 01111111 11122344559999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 343 WLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+||.+||.+|||+.|+|+||||+...
T Consensus 342 ~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 342 GFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp HHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred HHcCCCchhCCCHHHHhhChHHHHHH
Confidence 99999999999999999999998753
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=300.14 Aligned_cols=208 Identities=20% Similarity=0.258 Sum_probs=164.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.+.. .+|++||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 87 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ 161 (335)
T 2owb_A 87 KMSMEISIHRSLAHQHVVGFHG-FFEDND---FVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR 161 (335)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEecCC---eEEEEEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 67999999 889999998543 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+........
T Consensus 162 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 196 (335)
T 2owb_A 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--------------------------------------------- 196 (335)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC---------------------------------------------
T ss_pred CEecCCCchhEEEcCCCCEEEeeccCceecccCcc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 197 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 231 (335)
T 2owb_A 197 ---------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 231 (335)
T ss_dssp ---------------------------------------------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccCHHHhccCCCCchhhHHHHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||...... .....+...... +...+ +...+||.+||+.||.+|||+.|+|+||||....
T Consensus 232 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~ 299 (335)
T 2owb_A 232 YTLLVGKPPFETSCLK-ETYLRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY 299 (335)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred HHHHHCcCCCCCCCHH-HHHHHHhcCCCC--CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence 99999 66654433 223333322221 11223 4456999999999999999999999999998753
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=299.47 Aligned_cols=209 Identities=14% Similarity=0.206 Sum_probs=158.4
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. ||||+++++ ++.+.. ....+++||| .+++|.+++.. +++.+++.++.||+.||.|||++
T Consensus 76 ~~~~E~~~l~~l~~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~ 149 (330)
T 3nsz_A 76 KIKREIKILENLRGGPNIITLAD-IVKDPV-SRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSM 149 (330)
T ss_dssp HHHHHHHHHHHHTTSTTBCCEEE-EEECTT-TCCEEEEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCEEEeee-eeccCC-CCceEEEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhC
Confidence 3447788899987 999999999 554432 2368999999 88999998843 89999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+||||||+|||++.++ .+||+|||++.......
T Consensus 150 ~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 185 (330)
T 3nsz_A 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-------------------------------------------- 185 (330)
T ss_dssp TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC--------------------------------------------
T ss_pred CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC--------------------------------------------
Confidence 999999999999999776 89999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+ ..++.++||||||
T Consensus 186 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 218 (330)
T 3nsz_A 186 -----------------------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG 218 (330)
T ss_dssp -----------------------------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHH
T ss_pred -----------------------------------------------ccccccccccccChhhhcCCCcCCchhhHHHHH
Confidence 0011367999999999987 5589999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhh-------------c--CCCCcc--------------------ccc-cCchHHH
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLR-------------H--RVLPPQ--------------------LLL-KFPKEAS 339 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~-------------~--~~~p~~--------------------~~~-~~p~~~~ 339 (720)
|++|||++ ||.........+..+. . ...++. ... ..+...+
T Consensus 219 ~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (330)
T 3nsz_A 219 CMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD 298 (330)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHH
T ss_pred HHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHH
Confidence 99999999 6644322211111111 0 011111 011 2344569
Q ss_pred HHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 340 FCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||.+||++||.+|||+.|+|+||||+...
T Consensus 299 li~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 299 FLDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred HHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 99999999999999999999999999863
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-33 Score=297.09 Aligned_cols=213 Identities=16% Similarity=0.214 Sum_probs=159.7
Q ss_pred hhhhhcc---cCCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 66 SDGVELT---HGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~L~---~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+|..++. .++||||+++++.+... ......+++||||.+++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 60 ~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 139 (326)
T 1blx_A 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139 (326)
T ss_dssp HHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4444444 45899999999943321 122346899999966799999954 334599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.+||+|||.+...+...
T Consensus 140 gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 174 (326)
T 1blx_A 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------- 174 (326)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG---------------------------------------------
T ss_pred CceeccCCHHHeEEcCCCCEEEecCcccccccCCC---------------------------------------------
Confidence 99999999999999999999999998874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 175 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 208 (326)
T 1blx_A 175 ----------------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208 (326)
T ss_dssp ----------------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHH
Confidence 0011467999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC------------------------ccccccCch-HHHHHHHcCCCCCCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP------------------------PQLLLKFPK-EASFCLWLLHPEPSGR 352 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p------------------------~~~~~~~p~-~~~Li~~~L~~dP~~R 352 (720)
+|+|++ ||............+.....+ ..+....+. ..+||.+||..||.+|
T Consensus 209 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 288 (326)
T 1blx_A 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288 (326)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTS
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccC
Confidence 999999 666654443222222110000 011122333 3499999999999999
Q ss_pred CChHHHHcCcccCCCcc
Q 004989 353 PKMGELLQSEFLNEPRD 369 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~ 369 (720)
||+.|+|+||||+....
T Consensus 289 pt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 289 ISAYSALSHPYFQDLER 305 (326)
T ss_dssp CCHHHHHTSGGGTTCCC
T ss_pred CCHHHHhcCccccccch
Confidence 99999999999998744
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-33 Score=299.14 Aligned_cols=210 Identities=20% Similarity=0.252 Sum_probs=159.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 70 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ 144 (331)
T 4aaa_A 70 IAMREIKLLKQLRHENLVNLLE-VCKKKK---RWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSHN 144 (331)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhCCCCCEeeEEE-EeecCC---EEEEEEecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555443 67999999 777777776444 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+........
T Consensus 145 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 179 (331)
T 4aaa_A 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--------------------------------------------- 179 (331)
T ss_dssp CCCCCCCGGGEEECTTSCEEECCCTTC-----------------------------------------------------
T ss_pred EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
......||++|+|||++.+. .++.++|||||||+
T Consensus 180 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~i 214 (331)
T 4aaa_A 180 ---------------------------------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCL 214 (331)
T ss_dssp -------------------------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHH
Confidence 00113689999999999876 58999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhc-CCCCc------------------c----------ccccCchHHHHHHHcCCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRH-RVLPP------------------Q----------LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~-~~~p~------------------~----------~~~~~p~~~~Li~~~L~~d 348 (720)
+|+|++ ||............+.. +..++ . .....+...+||.+||++|
T Consensus 215 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 294 (331)
T 4aaa_A 215 VTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID 294 (331)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSS
T ss_pred HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccC
Confidence 999999 67665443322222110 00000 0 0112234459999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004989 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.|+|+||||+..
T Consensus 295 P~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 295 PDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp GGGSCCGGGGGGSHHHHGG
T ss_pred cccCCCHHHHhcCchhccC
Confidence 9999999999999999874
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=301.01 Aligned_cols=210 Identities=18% Similarity=0.212 Sum_probs=165.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHH------HhCC-CCCCCHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQW------LDKP-KRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~------L~~~-~~~l~~~~~~~i~~QIl~aL 134 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.++ +... ...+++..++.++.||+.||
T Consensus 89 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l 164 (348)
T 2pml_X 89 DFKNELQIITDIKNEYCLTCEG-IITNYD---EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSF 164 (348)
T ss_dssp HHHHHHHHHTTCCCTTBCCCSE-EEESSS---EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEeeCC---eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 555443 68999999 78899998 6332 45699999999999999999
Q ss_pred HHHHH-CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 135 YAAHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 135 ~yLHs-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
.|||+ +||+||||||+||+++.++.++|+|||.+......
T Consensus 165 ~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~--------------------------------------- 205 (348)
T 2pml_X 165 SYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK--------------------------------------- 205 (348)
T ss_dssp HHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT---------------------------------------
T ss_pred HHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc---------------------------------------
Confidence 99999 99999999999999999999999999887332110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCc-c
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSC-A 291 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~-~ 291 (720)
......||+.|+|||++.+. .++. +
T Consensus 206 -----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 232 (348)
T 2pml_X 206 -----------------------------------------------------KIKGSRGTYEFMPPEFFSNESSYNGAK 232 (348)
T ss_dssp -----------------------------------------------------EECSSCSCGGGCCGGGGSSCCCEEHHH
T ss_pred -----------------------------------------------------cccCCCCCcCccCchhhcCCCCCCcch
Confidence 00114689999999999887 5666 9
Q ss_pred ccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccc-----------------cccC-chHHHHHHHcCCCCCC
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-----------------LLKF-PKEASFCLWLLHPEPS 350 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-----------------~~~~-p~~~~Li~~~L~~dP~ 350 (720)
+|||||||++|||++ ||............+.....+... ...+ +...+||.+||+.||.
T Consensus 233 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 312 (348)
T 2pml_X 233 VDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPA 312 (348)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGG
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChh
Confidence 999999999999999 676655534455555443222110 0223 3445999999999999
Q ss_pred CCCChHHHHcCcccCCCc
Q 004989 351 GRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~ 368 (720)
+|||+.|+|+||||+...
T Consensus 313 ~Rps~~e~l~hp~f~~~~ 330 (348)
T 2pml_X 313 ERITSEDALKHEWLADTN 330 (348)
T ss_dssp GSCCHHHHHTSGGGTTCC
T ss_pred hCCCHHHHhcCccccCCC
Confidence 999999999999999863
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=291.89 Aligned_cols=205 Identities=14% Similarity=0.190 Sum_probs=163.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+.. .+|++||| .+++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 60 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (284)
T 2vgo_A 60 QLRREIEIQSHLRHPNILRMYN-YFHDRK---RIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERK 134 (284)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCCCCCEeeEEE-EEEcCC---EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446778999999999999999 555443 67999999 7889999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+......
T Consensus 135 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------- 167 (284)
T 2vgo_A 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL----------------------------------------------- 167 (284)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCTTCEECSSS-----------------------------------------------
T ss_pred ceecCCCHHHEEEcCCCCEEEecccccccCccc-----------------------------------------------
Confidence 999999999999999999999998876321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 202 (284)
T 2vgo_A 168 ---------------------------------------------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLC 202 (284)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHH
Confidence 00113679999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||....... ....+..... .++... +...+||.+||+.||.+|||+.++++||||+..
T Consensus 203 ~~l~~g~~pf~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 203 YEFLVGMPPFDSPSHTE-THRRIVNVDL--KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp HHHHHSSCTTCCSSHHH-HHHHHHTTCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred HHHHHCCCCCCCCCHhH-HHHHHhcccc--CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 99999 666554432 2333332221 122223 344599999999999999999999999999864
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-33 Score=317.73 Aligned_cols=208 Identities=17% Similarity=0.219 Sum_probs=164.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..+|.+++||||+++++ ++++.. .+|+|||| .|++|.++|... ...+++..++.|+.||+.||.|||+
T Consensus 232 ~~~E~~iL~~l~hp~Iv~l~~-~~~~~~---~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~ 307 (543)
T 3c4z_A 232 AMVEKKILAKVHSRFIVSLAY-AFETKT---DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307 (543)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEeeEEE-EEeeCC---EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence 346778999999999999999 555543 57999999 899999999543 3459999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.+|++||+|||++........
T Consensus 308 ~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~------------------------------------------- 344 (543)
T 3c4z_A 308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT------------------------------------------- 344 (543)
T ss_dssp TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-------------------------------------------
T ss_pred cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-------------------------------------------
Confidence 9999999999999999999999999998843211100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 345 -----------------------------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGv 377 (543)
T 3c4z_A 345 -----------------------------------------------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGV 377 (543)
T ss_dssp -----------------------------------------------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCccccChhhhcCCCCChHHhcCcchH
Confidence 001147899999999999988999999999999
Q ss_pred hhhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
++|||++ ||.... ........+..... .++..+ +...+||.+||++||.+||+ +.+|++||||+..
T Consensus 378 ilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 378 TLYEMIAARGPFRARGEKVENKELKQRVLEQAV--TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp HHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCCccchhHHHHHHHHhhccc--CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 9999999 676542 22333433333221 122233 44559999999999999995 5899999999986
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-33 Score=301.35 Aligned_cols=217 Identities=15% Similarity=0.142 Sum_probs=160.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+...+...+..++||||+++++.+..... ....+++||||.+++|.+.+. .....+++..++.++.||+.||.|
T Consensus 65 ~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 144 (360)
T 3e3p_A 65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144 (360)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 34456667788899999999994443222 222478999996678776663 345568999999999999999999
Q ss_pred HH--HCCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 137 AH--SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 137 LH--s~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|| ++||+||||||+|||++. ++.+||+|||++.......
T Consensus 145 lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------- 186 (360)
T 3e3p_A 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE-------------------------------------- 186 (360)
T ss_dssp HTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS--------------------------------------
T ss_pred HhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC--------------------------------------
Confidence 99 999999999999999996 8999999998874332110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCAS 292 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~s 292 (720)
......||+.|+|||++.+.. ++.++
T Consensus 187 -----------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~ 213 (360)
T 3e3p_A 187 -----------------------------------------------------PNVAYICSRYYRAPELIFGNQHYTTAV 213 (360)
T ss_dssp -----------------------------------------------------CCCSTTSCGGGCCHHHHTTCSSCCTHH
T ss_pred -----------------------------------------------------CcccccCCcceeCHHHHcCCCCCCcHH
Confidence 001146799999999997665 89999
Q ss_pred cchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCc-c-----------------------------ccccCchHHH
Q 004989 293 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-Q-----------------------------LLLKFPKEAS 339 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~-----------------------------~~~~~p~~~~ 339 (720)
|||||||++|||++ ||............+.....++ . .....+...+
T Consensus 214 Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
T 3e3p_A 214 DIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYD 293 (360)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHH
Confidence 99999999999999 6766554433322222111110 0 0001234559
Q ss_pred HHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 340 FCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+||++||.+|||+.|+|+||||+....+
T Consensus 294 li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 294 LLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp HHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred HHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 9999999999999999999999999987543
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=302.68 Aligned_cols=207 Identities=17% Similarity=0.205 Sum_probs=160.1
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|.++ +||||+++++ +++++. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||.|||++||+
T Consensus 64 ~E~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~giv 138 (342)
T 2qr7_A 64 EEIEILLRYGQHPNIITLKD-VYDDGK---YVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVV 138 (342)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCcCeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 455566665 7999999999 565543 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccC----CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 144 VHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 144 HrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||||||+|||+... +.+||+|||++....... .
T Consensus 139 HrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------~---------- 175 (342)
T 2qr7_A 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------------------------------G---------- 175 (342)
T ss_dssp CSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---------------------------------C----------
T ss_pred eccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---------------------------------C----------
Confidence 99999999998543 349999888874321110 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 176 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 208 (342)
T 2qr7_A 176 -----------------------------------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGV 208 (342)
T ss_dssp -----------------------------------------------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------ceeccCCCccccCHHHhcCCCCCCccCeeeHhH
Confidence 001146899999999998877999999999999
Q ss_pred hhhhccc---cCCCC--chHHHHHHHhhcCCCC--ccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTG--EEKTRTMSSLRHRVLP--PQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~--~~~~~~~~~l~~~~~p--~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||... ......+..+..+.++ ...+...+ ...+||.+||++||.+|||+.++|+||||...
T Consensus 209 il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 209 LLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp HHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred HHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 9999999 66542 2333455555544332 22333344 44599999999999999999999999999653
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-33 Score=293.24 Aligned_cols=216 Identities=15% Similarity=0.206 Sum_probs=155.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-------CCCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..++.+++||||+++++ ++.... .+++|||| .|++|.+++.. ....+++..++.++.||+.||.
T Consensus 60 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 135 (303)
T 2vwi_A 60 LLKEIQAMSQCHHPNIVSYYT-SFVVKD---ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135 (303)
T ss_dssp ------CCCCCCCTTBCCEEE-EEESSS---CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCEeeEEE-EEeecC---CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHH
Confidence 347788999999999999999 554443 57999999 79999999952 3445899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+||+++.++.++|+|||.+....... ++.
T Consensus 136 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~---- 178 (303)
T 2vwi_A 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG---------------------------------DIT---- 178 (303)
T ss_dssp HHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-------------------------------------------
T ss_pred HHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCC---------------------------------Ccc----
Confidence 9999999999999999999999999999998874321110 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDI 294 (720)
.........||+.|+|||++.+ ..++.++||
T Consensus 179 ------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 210 (303)
T 2vwi_A 179 ------------------------------------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210 (303)
T ss_dssp ---------------------------------------------------------CCCTTCCHHHHHHHHCCCTHHHH
T ss_pred ------------------------------------------------chhhhcccCCCccccCHHHhccccCCCchhhH
Confidence 0000011468999999999976 458999999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhcCCC-------CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-------PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-------p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|||||++|||++ ||............+..... .+.....++ ...+|+.+||+.||.+|||+.++++|||
T Consensus 211 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 290 (303)
T 2vwi_A 211 WSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290 (303)
T ss_dssp HHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 999999999999 67665444333333332211 111222333 3459999999999999999999999999
Q ss_pred cCCCc
Q 004989 364 LNEPR 368 (720)
Q Consensus 364 ~~~~~ 368 (720)
|+...
T Consensus 291 ~~~~~ 295 (303)
T 2vwi_A 291 FQKAK 295 (303)
T ss_dssp C----
T ss_pred hhcCC
Confidence 98763
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-32 Score=292.29 Aligned_cols=212 Identities=13% Similarity=0.163 Sum_probs=166.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|++||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 71 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 146 (314)
T 3com_A 71 IIKEISIMQQCDSPHVVKYYG-SYFKNT---DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146 (314)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCccEEE-EEEeCC---EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 346788999999999999999 444432 57999999 7889999996445569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+........
T Consensus 147 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 180 (314)
T 3com_A 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA---------------------------------------------- 180 (314)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS----------------------------------------------
T ss_pred cCCCcCHHHEEECCCCCEEEeecccchhhhhhcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 181 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 216 (314)
T 3com_A 181 --------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAI 216 (314)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHH
Confidence 001136899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||.........................++ ...+||.+||..||.+|||+.++|+||||+....
T Consensus 217 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~ 287 (314)
T 3com_A 217 EMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG 287 (314)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred HHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence 9999 66655444332222222211111223334 4459999999999999999999999999998744
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.9e-33 Score=310.84 Aligned_cols=212 Identities=15% Similarity=0.177 Sum_probs=153.4
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.++ +|||||++++ ++.+.. .+|+||||.+++|.+++......+.+.+++.++.||+.||.|||++||
T Consensus 64 ~~~E~~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 139 (432)
T 3p23_A 64 ADREVQLLRESDEHPNVIRYFC-TEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI 139 (432)
T ss_dssp CHHHHHHHHHSCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCCCCcCeEEE-EEecCC---EEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcC
Confidence 34777888888 7999999999 555443 579999997789999997666557777788999999999999999999
Q ss_pred eeccCCCCcEEEccC-----CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 143 VVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++.+ ..+||+|||++........ .+
T Consensus 140 vHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~--------------------------------~~------- 180 (432)
T 3p23_A 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH--------------------------------SF------- 180 (432)
T ss_dssp CCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----------------------------------------------
T ss_pred EeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc--------------------------------ce-------
Confidence 999999999999532 3577988887743311100 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccccc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDI 294 (720)
.......||++|+|||++.+ ..++.++||
T Consensus 181 ------------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~t~~~Di 212 (432)
T 3p23_A 181 ------------------------------------------------SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDI 212 (432)
T ss_dssp -----------------------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHH
T ss_pred ------------------------------------------------eeccccCCCcCccChhhhhcccccCCCcHHHH
Confidence 00011478999999999974 447889999
Q ss_pred hhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCcccc-c-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLL-L-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~-~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|||++ ||...... .....+.....+.... . ..+...+||.+||+.||.+|||+.++|+||||...
T Consensus 213 wSlG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 213 FSAGCVFYYVISEGSHPFGKSLQR-QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp HHHHHHHHHHHTTSCBTTBSTTTH-HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred HHHHHHHHHHHcCCCCCcchhhHH-HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 999999999998 45433222 1111222211111111 1 11224599999999999999999999999999875
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.98 E-value=6.1e-33 Score=293.78 Aligned_cols=206 Identities=17% Similarity=0.238 Sum_probs=164.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|++||| .|++|.+++...+ .+++..++.++.||+.||.|||++||
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 127 (304)
T 2jam_A 53 LENEIAVLKKIKHENIVTLED-IYESTT---HYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGI 127 (304)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCeeehhh-hcccCC---EEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347788999999999999999 555543 67999999 7899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEE---ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 143 VVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+||++ +.++.++|+|||.+......
T Consensus 128 ~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 162 (304)
T 2jam_A 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--------------------------------------------- 162 (304)
T ss_dssp CCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB---------------------------------------------
T ss_pred cccCCCHHHEEEecCCCCCCEEEccCCcceecCCC---------------------------------------------
Confidence 999999999999 67889999888876321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 163 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 195 (304)
T 2jam_A 163 -----------------------------------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 195 (304)
T ss_dssp -----------------------------------------------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCCccChHHhccCCCCchhhHHHHHH
Confidence 000136799999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC--CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|+|++ ||...... .....+..... +.......+ ...+||.+||.+||.+|||+.|+|+||||...
T Consensus 196 il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 196 ITYILLCGYPPFYEETES-KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp HHHHHHHSSCTTTTSCHH-HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred HHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 9999999 66554443 33444444322 223333344 45599999999999999999999999999875
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-32 Score=300.33 Aligned_cols=205 Identities=18% Similarity=0.206 Sum_probs=161.0
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.++ +||||+++++ ++.... ..|+|||| .|++|.+++... ..+++..++.++.||+.||.|||+.||
T Consensus 147 ~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~gi 221 (365)
T 2y7j_A 147 RRETHILRQVAGHPHIITLID-SYESSS---FMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANNI 221 (365)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEEBSS---EEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCEeEEEE-EEeeCC---EEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3677788888 8999999999 555443 68999999 889999999543 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++.......
T Consensus 222 ~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~----------------------------------------------- 254 (365)
T 2y7j_A 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----------------------------------------------- 254 (365)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred ecCCCCHHHEEECCCCCEEEEecCcccccCCCc-----------------------------------------------
Confidence 999999999999999999999998873321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC------CCCCccccchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYR 296 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~s~~sDIwS 296 (720)
......||+.|+|||++.+ ..++.++||||
T Consensus 255 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~s 290 (365)
T 2y7j_A 255 --------------------------------------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWA 290 (365)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHH
T ss_pred --------------------------------------------ccccCCCCCCccChhhccccccccCcCCCchhhHHh
Confidence 0011468999999999863 34889999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCc---cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|||++|||++ ||...... .....+....... .+....+...+||.+||+.||.+|||+.++|+||||+.
T Consensus 291 lG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 291 CGVILFTLLAGSPPFWHRRQI-LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 9999999999 66654443 3333343333221 12233344569999999999999999999999999973
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.98 E-value=6e-33 Score=290.11 Aligned_cols=208 Identities=17% Similarity=0.263 Sum_probs=163.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .++++||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 54 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 128 (283)
T 3bhy_A 54 EIEREVNILREIRHPNIITLHD-IFENKT---DVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKR 128 (283)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeehhh-eecCCC---eEEEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 555443 57999999 789999999543 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 142 IVVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+||+++.++ .++|+|||.+.......
T Consensus 129 i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~------------------------------------------ 166 (283)
T 3bhy_A 129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN------------------------------------------ 166 (283)
T ss_dssp EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---------------------------------------------
T ss_pred ccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC------------------------------------------
Confidence 99999999999998777 79999888773321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 167 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 197 (283)
T 3bhy_A 167 -------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 197 (283)
T ss_dssp ------------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------cccccCCCcCccCcceecCCCCCcchhhhhH
Confidence 0011367999999999998889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||...... .....+.... .++......+. ..+|+.+||..||.+|||+.++|+||||+..
T Consensus 198 G~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 198 GVITYILLSGASPFLGETKQ-ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHHHHSSCTTCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcchH-HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 999999999 66655443 3333333322 23333334444 4599999999999999999999999999875
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.6e-33 Score=291.94 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=164.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 66 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ 139 (303)
T 3a7i_A 66 DIQQEITVLSQCDSPYVTKYYG-SYLKDT---KLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK 139 (303)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecCC---eEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457788999999999999999 554433 57999999 78899999954 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 140 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 174 (303)
T 3a7i_A 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--------------------------------------------- 174 (303)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC---------------------------------------------
T ss_pred CccCCCChheEEECCCCCEEEeecccceecCcccc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 175 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 209 (303)
T 3a7i_A 175 ---------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 209 (303)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+..... +.+...++. ..+|+.+||++||.+|||+.++++||||...
T Consensus 210 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 210 IELARGEPPHSELHPM-KVLFLIPKNNP-PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp HHHHHSSCTTTTSCHH-HHHHHHHHSCC-CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred HHHccCCCCCCCcCHH-HHHHHhhcCCC-CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 99999 56554433 22333333322 233334444 4599999999999999999999999999764
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.3e-33 Score=298.44 Aligned_cols=208 Identities=21% Similarity=0.247 Sum_probs=160.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (322)
T 2ycf_A 61 NVETEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG 134 (322)
T ss_dssp CHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhCCCCCCceEee-EEcCC----ceEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 55544 37999999 788999999543 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++. +||+|||.+...+...
T Consensus 135 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 171 (322)
T 2ycf_A 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------------------------------------------- 171 (322)
T ss_dssp EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH-------------------------------------------
T ss_pred eeccCCCHHHEEEecCCCCCeEEEccCccceeccccc-------------------------------------------
Confidence 999999999999987664 9999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccch
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIw 295 (720)
......||+.|+|||++. ...++.++|||
T Consensus 172 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~ 203 (322)
T 2ycf_A 172 ------------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 203 (322)
T ss_dssp ------------------------------------------------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHH
T ss_pred ------------------------------------------------ccccccCCcCccCchhhccCCCCCCCchhhHH
Confidence 000136899999999974 45589999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||............+.... +.+...... +...+||.+||+.||.+|||+.++|+||||...
T Consensus 204 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~ 281 (322)
T 2ycf_A 204 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281 (322)
T ss_dssp HHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred HHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence 99999999999 6654332212222233222 223333333 444599999999999999999999999999864
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.1e-33 Score=290.34 Aligned_cols=207 Identities=18% Similarity=0.271 Sum_probs=157.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.... .+|++||| .+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 57 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 131 (276)
T 2h6d_A 57 KIKREIQNLKLFRHPHIIKLYQ-VISTPT---DFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHM 131 (276)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCEeEEEE-EEecCC---eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447788899999999999999 554443 67999999 7899999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.......
T Consensus 132 i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------------------- 165 (276)
T 2h6d_A 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---------------------------------------------- 165 (276)
T ss_dssp SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------------------------------------------------
T ss_pred CccCCCChhhEEECCCCCEEEeecccccccCCCc----------------------------------------------
Confidence 9999999999999999999999998874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..+ +.++|||||||+
T Consensus 166 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~ 200 (276)
T 2h6d_A 166 ---------------------------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVI 200 (276)
T ss_dssp --------------------------------------------------------CCTGGGTTSCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ceecccCCccccCHHHHcCCCCCCccchHHHHHHH
Confidence 0001367999999999988765 689999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|+|++ ||...... .....+.....+ ++.. .+...+|+.+||+.||.+|||+.++++||||+...
T Consensus 201 l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 201 LYALLCGTLPFDDEHVP-TLFKKIRGGVFY--IPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred HHHHHhCCCCCCCCcHH-HHHHHhhcCccc--CchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 999999 66654333 344444443321 1122 24456999999999999999999999999998753
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.7e-33 Score=290.59 Aligned_cols=207 Identities=20% Similarity=0.263 Sum_probs=164.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.+.. .++++||| .+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 61 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 135 (294)
T 2rku_A 61 KMSMEISIHRSLAHQHVVGFHG-FFEDND---FVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNR 135 (294)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeeee-eeccCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555443 57999999 8899999985433 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 136 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 170 (294)
T 2rku_A 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--------------------------------------------- 170 (294)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC---------------------------------------------
T ss_pred ccccCCChHhEEEcCCCCEEEEeccCceecccCcc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 171 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 205 (294)
T 2rku_A 171 ---------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 205 (294)
T ss_dssp ---------------------------------------------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHH
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+.....+ +.... +...+|+.+||+.||.+|||+.|+++||||...
T Consensus 206 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 206 YTLLVGKPPFETSCLK-ETYLRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272 (294)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHTTCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhhccCC--CccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence 99999 66654443 233333332221 11223 445699999999999999999999999999865
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.4e-33 Score=295.43 Aligned_cols=216 Identities=18% Similarity=0.267 Sum_probs=160.0
Q ss_pred hchhhhhhcccCC--CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. ||||+++++ ++.... .+|++||+.+++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 72 ~~~~E~~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~ 146 (313)
T 3cek_A 72 SYRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH 146 (313)
T ss_dssp HHHHHHHHHHHHGGGCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccccCCceEEEEE-EeecCC---EEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4447777888887 599999999 554443 589999999999999996544 589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.+||+|||++.........
T Consensus 147 ~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~------------------------------------------- 182 (313)
T 3cek_A 147 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS------------------------------------------- 182 (313)
T ss_dssp TCCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------------------------------------------
T ss_pred CceecCCCcccEEEE-CCeEEEeeccccccccCcccc-------------------------------------------
Confidence 999999999999996 589999999987443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----------CCCC
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVS 289 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s 289 (720)
.......||+.|+|||++.+ ..++
T Consensus 183 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~ 217 (313)
T 3cek_A 183 ---------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217 (313)
T ss_dssp ----------------------------------------------------CCGGGCCHHHHTTCC----------CCC
T ss_pred ---------------------------------------------ccccCCCCCCCcCCHHHHhhcccccccccccccCC
Confidence 00011468999999999976 3588
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
.++|||||||++|||++ ||.........+..+........+....+ ...+||.+||+.||.+|||+.|+|+||||+
T Consensus 218 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~ 297 (313)
T 3cek_A 218 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297 (313)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence 99999999999999999 66655443333333333333333333334 455999999999999999999999999999
Q ss_pred CCccchH
Q 004989 366 EPRDSME 372 (720)
Q Consensus 366 ~~~~~l~ 372 (720)
....+..
T Consensus 298 ~~~~~~~ 304 (313)
T 3cek_A 298 IQTHPVN 304 (313)
T ss_dssp CC-----
T ss_pred CCCCchh
Confidence 8754433
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-34 Score=314.96 Aligned_cols=207 Identities=11% Similarity=0.089 Sum_probs=140.3
Q ss_pred hhhcccCCCCCceeccccee------ecCCC--------------CCcEEEEEecCCCCHHHHHhCCCCCCCHHHH----
Q 004989 68 GVELTHGDHLRNQGGLSGVC------ENEAA--------------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYEC---- 123 (720)
Q Consensus 68 ~~~L~~l~HpnIV~l~~~~~------~~~~~--------------~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~---- 123 (720)
..+|.. +||||++++..++ ..... ...+|+||||.+++|.+++...+..+++...
T Consensus 116 ~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~ 194 (371)
T 3q60_A 116 AARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGIL 194 (371)
T ss_dssp HHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHH
T ss_pred HHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhh
Confidence 456666 8999888663222 11111 1347999999669999999654333555555
Q ss_pred --HHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 124 --LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 124 --~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...+..
T Consensus 195 vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------- 247 (371)
T 3q60_A 195 ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR--------------------------- 247 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---------------------------
T ss_pred hHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC---------------------------
Confidence 677799999999999999999999999999999999999988887432110
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.....+|+.|+|||
T Consensus 248 ------------------------------------------------------------------~~~~~~t~~y~aPE 261 (371)
T 3q60_A 248 ------------------------------------------------------------------GPASSVPVTYAPRE 261 (371)
T ss_dssp ------------------------------------------------------------------EEGGGSCGGGCCHH
T ss_pred ------------------------------------------------------------------ccCccCCcCCcChh
Confidence 00135679999999
Q ss_pred cccC--CCCCccccchhhhchhhhccc---cCCCCchHHH-HHHH---hh--c-CCCCccccccCchHHHHHHHcCCCCC
Q 004989 282 ELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTR-TMSS---LR--H-RVLPPQLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 282 ~l~~--~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~-~~~~---l~--~-~~~p~~~~~~~p~~~~Li~~~L~~dP 349 (720)
++.+ ..++.++|||||||++|||++ ||........ .+.. .. . ....+......+...+||.+||++||
T Consensus 262 ~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 341 (371)
T 3q60_A 262 FLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDR 341 (371)
T ss_dssp HHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSST
T ss_pred hccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCCh
Confidence 9987 569999999999999999999 6654422100 0000 00 0 11111112223445599999999999
Q ss_pred CCCCChHHHHcCcccCCCc
Q 004989 350 SGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||+.++|+||||+...
T Consensus 342 ~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 342 RRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TTCCCHHHHTTSHHHHHHH
T ss_pred hhCCCHHHHhcCHHHHHHH
Confidence 9999999999999998763
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-33 Score=307.34 Aligned_cols=253 Identities=16% Similarity=0.112 Sum_probs=159.2
Q ss_pred hhhhhhcccCC--------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGD--------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 65 ~~e~~~L~~l~--------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
.+|..+|.++. ||||+++++.+...+.....+|+||||.+++|.+++. .....+++..++.|+.||+.||.
T Consensus 81 ~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 160 (397)
T 1wak_A 81 LDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLD 160 (397)
T ss_dssp HHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Confidence 36677777764 8889999995544433445789999998888888884 33356999999999999999999
Q ss_pred HHHHC-CceeccCCCCcEEEccCCceEEeecCcccCCCC---CCcccccccccccccCCCCCCc-hhhhhhhhccccccc
Q 004989 136 AAHSQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS---DSHEEGLNTQNMETKDLSSPLP-LDMLQRRTRLRREDL 210 (720)
Q Consensus 136 yLHs~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~l~Df 210 (720)
|||++ ||+||||||+|||++.++.....+++....... .....................+ .........++++||
T Consensus 161 ~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df 240 (397)
T 1wak_A 161 YLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADL 240 (397)
T ss_dssp HHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCG
T ss_pred HHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccc
Confidence 99999 999999999999998765321111111100000 0000000000000000000000 111222335677788
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
|++...... ....+||+.|+|||++.+..++.
T Consensus 241 G~a~~~~~~------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~ 272 (397)
T 1wak_A 241 GNACWVHKH------------------------------------------------FTEDIQTRQYRSLEVLIGSGYNT 272 (397)
T ss_dssp GGCEETTBC------------------------------------------------SCSCCSCGGGCCHHHHHTSCCCT
T ss_pred ccccccccc------------------------------------------------CccCCCCCcccCChhhcCCCCCc
Confidence 776532110 01147899999999999999999
Q ss_pred cccchhhhchhhhccc---cCCCCch------HH--HHHHHhhcCCCCccc-----------------------------
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEE------KT--RTMSSLRHRVLPPQL----------------------------- 330 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~------~~--~~~~~l~~~~~p~~~----------------------------- 330 (720)
++|||||||+||||++ ||.+... .. ..+..+. +.+|..+
T Consensus 273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (397)
T 1wak_A 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL-GKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLF 351 (397)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHH-CSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhc-CCCChHHhhcccccccccCCccccccccccCCcchh
Confidence 9999999999999999 6654321 11 1111111 1111110
Q ss_pred ---------cc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 331 ---------LL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 331 ---------~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
.. ..+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 352 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 352 EVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 00 0122349999999999999999999999999973
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.5e-33 Score=294.68 Aligned_cols=203 Identities=17% Similarity=0.189 Sum_probs=154.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++.... .+++|||| .+++|.+++..... .+++..++.++.||+.||.|||+
T Consensus 80 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 155 (309)
T 3p86_A 80 EFLREVAIMKRLRHPNIVLFMG-AVTQPP---NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155 (309)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSTT---CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 4447888999999999999999 554443 46999999 89999999965432 38999999999999999999999
Q ss_pred CC--ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 140 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 140 ~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+| |+||||||+|||++.++.+||+|||++........
T Consensus 156 ~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~----------------------------------------- 194 (309)
T 3p86_A 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL----------------------------------------- 194 (309)
T ss_dssp SSSCCCCTTCCGGGEEECTTCCEEECCCC---------------------------------------------------
T ss_pred CCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc-----------------------------------------
Confidence 99 99999999999999999999999988742211100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 195 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 225 (309)
T 3p86_A 195 -------------------------------------------------SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSF 225 (309)
T ss_dssp --------------------------------------------------------CCTTSCHHHHTTCCCCTTHHHHHH
T ss_pred -------------------------------------------------ccccCCCCccccChhhhcCCCCCchhhHHHH
Confidence 0011468999999999999999999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||....... ....+........++..+ +...+||.+||..||.+|||+.++++
T Consensus 226 G~il~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 226 GVILWELATLQQPWGNLNPAQ-VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291 (309)
T ss_dssp HHHHHHHHHCCCTTTTSCHHH-HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999 776655443 333332222222233333 44569999999999999999999987
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.8e-33 Score=298.86 Aligned_cols=225 Identities=17% Similarity=0.212 Sum_probs=163.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|++|||.+++|.+++... .+++..++.++.||+.||.|||++
T Consensus 55 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~ 131 (353)
T 2b9h_A 55 RTLREIKILKHFKHENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS 131 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSCSTTCCCEEEEECCCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCCCcCCeee-eecccccCccceEEEEEeccCccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4457888999999999999999 44322 223468999999778999999653 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++........... ...
T Consensus 132 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~----------------------------~~~---------- 173 (353)
T 2b9h_A 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS----------------------------EPT---------- 173 (353)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECC------------------------------------------------
T ss_pred CeecCCCCHHHeEEcCCCcEEEEeccccccccccccccc----------------------------Ccc----------
Confidence 999999999999999999999999998854322110000 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
.........+||+.|+|||++.+ ..++.++|||||||
T Consensus 174 ------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~ 211 (353)
T 2b9h_A 174 ------------------------------------------GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211 (353)
T ss_dssp ------------------------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHH
T ss_pred ------------------------------------------ccccchhhccccccccCCeeeccCCCccchhhHHHHHH
Confidence 00000112478999999998865 56899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh--cCC-----------------------CCc----cc-cccCchHHHHHHHcCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLR--HRV-----------------------LPP----QL-LLKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~--~~~-----------------------~p~----~~-~~~~p~~~~Li~~~L~ 346 (720)
++|+|++ ||.............. ... .+. .. ....+...+||.+||+
T Consensus 212 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (353)
T 2b9h_A 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLV 291 (353)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcC
Confidence 9999999 6665543322211111 000 000 01 1223444599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||.+|||+.|+|+||||+....+
T Consensus 292 ~dP~~Rpt~~ell~hp~~~~~~~~ 315 (353)
T 2b9h_A 292 FDPAKRITAKEALEHPYLQTYHDP 315 (353)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred cCcccCCCHHHHhcCccccccCCc
Confidence 999999999999999999986543
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-32 Score=293.74 Aligned_cols=214 Identities=15% Similarity=0.202 Sum_probs=159.9
Q ss_pred chhhhhhcccC-CCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..+|..++.++ +||||+++++.+..... ....+|+|||| .+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 67 ~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH 146 (326)
T 2x7f_A 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146 (326)
T ss_dssp HHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33666778887 89999999994443221 13468999999 788999999543 345999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.++|+|||++........
T Consensus 147 ~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 184 (326)
T 2x7f_A 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG------------------------------------------ 184 (326)
T ss_dssp HTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------------------------------------------
T ss_pred HCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc------------------------------------------
Confidence 99999999999999999999999999988743211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCcccc
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASD 293 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sD 293 (720)
......||+.|+|||++. +..++.++|
T Consensus 185 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 216 (326)
T 2x7f_A 185 ------------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSD 216 (326)
T ss_dssp ------------------------------------------------------CCGGGCCHHHHC--------CCTTHH
T ss_pred ------------------------------------------------ccccccCCccccChhhhccccccCcCCCccch
Confidence 001136899999999997 455899999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||||||++|+|++ ||......... ..+.....+......++. ..+||.+||..||.+|||+.++++||||+...
T Consensus 217 i~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 217 LWSLGITAIEMAEGAPPLCDMHPMRAL-FLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp HHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred HHHHHHHHHHHHhCCCCCCCCcHHHHH-HHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 9999999999999 66655444332 333333333333334444 45999999999999999999999999998763
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-32 Score=283.89 Aligned_cols=200 Identities=16% Similarity=0.175 Sum_probs=157.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~-~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++.+.. ...++++||| .+++|.+++..... .+++.+++.++.||+.||.|||++
T Consensus 53 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 130 (271)
T 3kmu_A 53 DFNEECPRLRIFSHPNVLPVLG-ACQSPP-APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL 130 (271)
T ss_dssp HHHHHGGGGCCCSCTTEECEEE-EECTTT-SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhcCCCchhheEE-EEccCC-CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 4558888999999999999999 554432 2367999999 88999999965433 589999999999999999999999
Q ss_pred C--ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 141 G--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 141 g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
| |+||||||+||+++.++.++++|||+.....
T Consensus 131 ~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~---------------------------------------------- 164 (271)
T 3kmu_A 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ---------------------------------------------- 164 (271)
T ss_dssp SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS----------------------------------------------
T ss_pred CCceecCCCccceEEEcCCcceeEEeccceeeec----------------------------------------------
Confidence 9 9999999999999999999998766541100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc---cccch
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC---ASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~---~sDIw 295 (720)
.....||+.|+|||++.+..++. ++|||
T Consensus 165 -------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~ 195 (271)
T 3kmu_A 165 -------------------------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMW 195 (271)
T ss_dssp -------------------------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHH
T ss_pred -------------------------------------------------ccCccCCccccChhhhccCCCCCCCchhhHH
Confidence 00136799999999998876444 79999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..................+ .++..++ ...+|+.+||+.||.+|||+.++++
T Consensus 196 slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 196 SFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP-TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp HHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999 776665554444444333333 3333344 4559999999999999999999985
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.2e-33 Score=288.93 Aligned_cols=214 Identities=17% Similarity=0.226 Sum_probs=165.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++||||+++++.+.... ...+|+|||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 128 (279)
T 2w5a_A 51 MLVSEVNLLRELKHPNIVRYYDRIIDRT--NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128 (279)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEEEGG--GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCeEEEEEecCC--CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 4447888999999999999999443322 2368999999 78899999943 2345999999999999999999999
Q ss_pred HCC-----ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 139 SQG-----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 s~g-----IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
++| |+||||||+||+++.++.+||+|||.+...+... .
T Consensus 129 ~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~---------------------------------~---- 171 (279)
T 2w5a_A 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------------------------S---- 171 (279)
T ss_dssp HHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C---------------------------------H----
T ss_pred cccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc---------------------------------c----
Confidence 999 9999999999999999999999998874321110 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
......||+.|+|||++.+..++.++|
T Consensus 172 -----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~D 198 (279)
T 2w5a_A 172 -----------------------------------------------------FAKTFVGTPYYMSPEQMNRMSYNEKSD 198 (279)
T ss_dssp -----------------------------------------------------HHHHHHSCCTTCCHHHHHCC-CCHHHH
T ss_pred -----------------------------------------------------cccccCCCccccChHHhccCCCCchhh
Confidence 000136799999999999988999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||||||++|+|++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.|+|+|+|+.+...
T Consensus 199 i~slG~il~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 199 IWSLGCLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred HHHHHHHHHHHHHCCCCCcccCHH-HHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 9999999999999 66655433 344445444443322223344569999999999999999999999999998743
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-32 Score=292.21 Aligned_cols=219 Identities=15% Similarity=0.152 Sum_probs=161.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-----------CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-----------AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-----------~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl 131 (720)
+..+|..++.+++||||+++++ ++... .....+|+||||.+++|.+++.+ ..+++..++.++.||+
T Consensus 54 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~ 130 (320)
T 2i6l_A 54 HALREIKIIRRLDHDNIVKVFE-ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARLFMYQLL 130 (320)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeeEEEE-eccccccccccccccccccCceeEEeeccCCCHHHHhhc--CCccHHHHHHHHHHHH
Confidence 4447888999999999999999 44222 22346899999966799999954 3489999999999999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 132 EIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
.||.|||++||+||||||+|||++ .++.+||+|||.+...+.....
T Consensus 131 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------- 177 (320)
T 2i6l_A 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH--------------------------------- 177 (320)
T ss_dssp HHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC---------------------------------------
T ss_pred HHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccc---------------------------------
Confidence 999999999999999999999997 5678999999987443111000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCC
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVS 289 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s 289 (720)
........||++|+|||++.+ ..++
T Consensus 178 ------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ 203 (320)
T 2i6l_A 178 ------------------------------------------------------KGHLSEGLVTKWYRSPRLLLSPNNYT 203 (320)
T ss_dssp --------------------------------------------------------CCCGGGSCCTTCCHHHHHCTTCCC
T ss_pred ------------------------------------------------------ccccccccccccccCcHHhcCcccCC
Confidence 000011367999999999876 5589
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCC-----------------------C----ccccccC-chHH
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-----------------------P----PQLLLKF-PKEA 338 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-----------------------p----~~~~~~~-p~~~ 338 (720)
.++|||||||++|||++ ||............+..... + ....... +...
T Consensus 204 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (320)
T 2i6l_A 204 KAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAV 283 (320)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHH
T ss_pred chhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHH
Confidence 99999999999999999 67665543322222211100 0 0111223 3445
Q ss_pred HHHHHcCCCCCCCCCChHHHHcCcccCCCccch
Q 004989 339 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 339 ~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
+||.+||+.||.+|||+.|+|+||||+....+.
T Consensus 284 ~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 284 DFLEQILTFSPMDRLTAEEALSHPYMSIYSFPM 316 (320)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred HHHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence 999999999999999999999999999764443
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-32 Score=288.66 Aligned_cols=212 Identities=19% Similarity=0.190 Sum_probs=160.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... .++++||| .+++|.+++... ...+++..++.++.||+.||.|||+
T Consensus 65 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 140 (295)
T 2clq_A 65 PLHEEIALHKHLKHKNIVQYLG-SFSENG---FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140 (295)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEee-EEEeCC---cEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 3447778999999999999999 554443 67999999 799999999543 2346799999999999999999999
Q ss_pred CCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+||+++. ++.++|+|||.+........
T Consensus 141 ~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 178 (295)
T 2clq_A 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------------------------------------------ 178 (295)
T ss_dssp TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---------------------------------------------
T ss_pred CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC------------------------------------------
Confidence 99999999999999987 89999999988743211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYR 296 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwS 296 (720)
......||+.|+|||++.+.. ++.++||||
T Consensus 179 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~s 210 (295)
T 2clq_A 179 ------------------------------------------------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWS 210 (295)
T ss_dssp --------------------------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHH
T ss_pred ------------------------------------------------cccccCCCccccChhhhcCCCCCCCcHHHHHH
Confidence 001136899999999997654 789999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++|+|++ ||.........+.........+.+...++ ...+|+.+||++||.+|||+.++|+||||+...
T Consensus 211 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 211 LGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999 55443222222222221122233333344 445999999999999999999999999999763
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.8e-33 Score=295.23 Aligned_cols=207 Identities=17% Similarity=0.250 Sum_probs=153.9
Q ss_pred hhhhhhcccCCCCC------ceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~L~~l~Hpn------IV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..++..++|+| |+++++ ++.... .+|+||||.+++|.+++... ...+++.+++.++.||+.||.||
T Consensus 59 ~~e~~~l~~l~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l 134 (339)
T 1z57_A 59 RSEIQVLEHLNTTDPNSTFRCVQMLE-WFEHHG---HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL 134 (339)
T ss_dssp HHHHHHHHHHHHHCTTCTTCBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCCCceeeEeeec-ccccCC---cEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 36666777666654 899999 555443 68999999999999999543 34589999999999999999999
Q ss_pred HHCCceeccCCCCcEEEcc-------------------CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 138 HSQGIVVHNVRPSCFVMSS-------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~-------------------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
|++||+||||||+|||++. ++.+||+|||.+...
T Consensus 135 H~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~--------------------------- 187 (339)
T 1z57_A 135 HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYD--------------------------- 187 (339)
T ss_dssp HHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEET---------------------------
T ss_pred HHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccC---------------------------
Confidence 9999999999999999987 445666666554211
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.. ......||+.|+
T Consensus 188 ------------------~~------------------------------------------------~~~~~~gt~~y~ 201 (339)
T 1z57_A 188 ------------------DE------------------------------------------------HHSTLVSTRHYR 201 (339)
T ss_dssp ------------------TS------------------------------------------------CCCSSCSCGGGC
T ss_pred ------------------cc------------------------------------------------ccccccCCcccc
Confidence 00 001146899999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc---cCCCCchHHH--HHHHhhcCCCCcccc----------------------
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLL---------------------- 331 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~--~~~~l~~~~~p~~~~---------------------- 331 (720)
|||++.+..++.++|||||||++|||++ ||........ .+..+. +.+|+.+.
T Consensus 202 aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (339)
T 1z57_A 202 APEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSA 280 (339)
T ss_dssp CHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHH
T ss_pred ChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCCHHHHhhccchhHHhhccccccccccc
Confidence 9999999889999999999999999999 6665443321 111111 11221110
Q ss_pred -------------------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 332 -------------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 332 -------------------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
...+...+||.+||++||.+|||+.|+|+||||+....
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 281 GRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp HHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred cchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence 00123459999999999999999999999999987643
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-32 Score=294.87 Aligned_cols=206 Identities=15% Similarity=0.103 Sum_probs=159.5
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..++.+++||||+++++ ++... .+++|||| .+++|.+++......+++..++.++.||+.||.|||++
T Consensus 60 ~~~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 134 (325)
T 3kex_A 60 QAVTDHMLAIGSLDHAHIVRLLG-LCPGS----SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134 (325)
T ss_dssp CSCCHHHHHHHTCCCTTBCCEEE-EECBS----SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcCeEEE-EEcCC----ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34457888999999999999999 55433 47899999 89999999976655699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++.........
T Consensus 135 ~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------- 171 (325)
T 3kex_A 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ------------------------------------------- 171 (325)
T ss_dssp TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC-------------------------------------------
T ss_pred CCCCCccchheEEECCCCeEEECCCCcccccCccccc-------------------------------------------
Confidence 9999999999999999999999999988543221000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.......||+.|+|||++.+..++.++|||||||+
T Consensus 172 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 206 (325)
T 3kex_A 172 ---------------------------------------------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVT 206 (325)
T ss_dssp ---------------------------------------------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCcccccChHHhccCCCChhhHhHHhHHH
Confidence 00011357889999999998889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|||++ ||...... .....+.....++......+...+|+.+||..||.+|||+.+++++
T Consensus 207 l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 207 VWELMTFGAEPYAGLRLA-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHHHHTTSCCTTTTSCTT-HHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred HHHHHhCCCCCccccCHH-HHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999998 56554332 2333333332222222233455699999999999999999999873
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.3e-33 Score=297.98 Aligned_cols=211 Identities=14% Similarity=0.080 Sum_probs=158.3
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
...+.++|..+|.+++|||||++++.+.........+|+|||| .+++|.+++... .+++..++.++.||+.||.|||
T Consensus 61 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH 138 (322)
T 3soc_A 61 QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH 138 (322)
T ss_dssp HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH
Confidence 3445567888999999999999999444434334468999999 889999999654 3999999999999999999999
Q ss_pred HC----------CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 139 SQ----------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 139 s~----------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
+. ||+||||||+|||++.++.+||+|||++.........
T Consensus 139 ~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~------------------------------- 187 (322)
T 3soc_A 139 EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA------------------------------- 187 (322)
T ss_dssp CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCC-------------------------------
T ss_pred hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCc-------------------------------
Confidence 99 9999999999999999999999999987432111000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-- 286 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-- 286 (720)
.......||+.|+|||++.+.
T Consensus 188 ---------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~ 210 (322)
T 3soc_A 188 ---------------------------------------------------------GDTHGQVGTRRYMAPEVLEGAIN 210 (322)
T ss_dssp ---------------------------------------------------------CCCTTCCCCGGGCCHHHHTTCCC
T ss_pred ---------------------------------------------------------cccccCccCccccCHhhcccccc
Confidence 000114689999999999873
Q ss_pred ---CCCccccchhhhchhhhccc---cCCCCc---------------hHHHHHHHhhcCCCCccccccC------chHHH
Q 004989 287 ---PVSCASDIYRLGVLLFELFC---PFSTGE---------------EKTRTMSSLRHRVLPPQLLLKF------PKEAS 339 (720)
Q Consensus 287 ---~~s~~sDIwSLGvll~eLlt---pf~~~~---------------~~~~~~~~l~~~~~p~~~~~~~------p~~~~ 339 (720)
.++.++|||||||++|||++ ||.... ........+......+.+...+ +...+
T Consensus 211 ~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (322)
T 3soc_A 211 FQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCE 290 (322)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHH
T ss_pred cCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHH
Confidence 36778999999999999999 564321 1122222233333333332222 22559
Q ss_pred HHHHcCCCCCCCCCChHHHHc
Q 004989 340 FCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||.+||+.||.+|||+.|+++
T Consensus 291 li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 291 TIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHHH
Confidence 999999999999999999985
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-32 Score=299.28 Aligned_cols=208 Identities=17% Similarity=0.221 Sum_probs=159.2
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 105 ~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 179 (355)
T 1vzo_A 105 TRTERQVLEHIRQSPFLVTLHY-AFQTET---KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLG 179 (355)
T ss_dssp CCCHHHHHHHHHTCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccCCCceeEEEE-EEeeCc---eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33677788888 6999999999 554443 57999999 8899999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++.......
T Consensus 180 ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--------------------------------------------- 214 (355)
T 1vzo_A 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--------------------------------------------- 214 (355)
T ss_dssp CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG---------------------------------------------
T ss_pred cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC---------------------------------------------
Confidence 99999999999999999999999988743211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCccccchhhhc
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+. .++.++|||||||
T Consensus 215 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~ 250 (355)
T 1vzo_A 215 --------------------------------------------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGV 250 (355)
T ss_dssp --------------------------------------------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHH
T ss_pred --------------------------------------------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHH
Confidence 000114789999999999864 3789999999999
Q ss_pred hhhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
++|||++ ||.... ........+.... + .++..+ +...+||.+||.+||.+|| ++.|+++||||...
T Consensus 251 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 251 LMYELLTGASPFTVDGEKNSQAEISRRILKSE-P-PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp HHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC-C-CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHCCCCCccCCccchHHHHHHHHhccC-C-CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 9999999 665321 2222222222221 1 222233 4445999999999999999 99999999999976
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-32 Score=298.70 Aligned_cols=205 Identities=16% Similarity=0.173 Sum_probs=159.8
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..+|..+ +|||||++++ ++.... .+|+|||| .|++|.++|.... ..+++.+++.
T Consensus 132 ~~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (370)
T 2psq_A 132 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207 (370)
T ss_dssp HHHHHHHHHHHSCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEeeEEE-EEccCC---CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHH
Confidence 344788899999 8999999999 555443 57999999 8899999995432 3489999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 208 i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----------------------------- 258 (370)
T 2psq_A 208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----------------------------- 258 (370)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCT-----------------------------
T ss_pred HHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccc-----------------------------
Confidence 999999999999999999999999999999999999999998853321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+ .......||+.|+|||++.+
T Consensus 259 ----~-------------------------------------------------------~~~~~~~~t~~y~aPE~~~~ 279 (370)
T 2psq_A 259 ----Y-------------------------------------------------------KKTTNGRLPVKWMAPEALFD 279 (370)
T ss_dssp ----T-------------------------------------------------------CTTTTTTSCGGGCCHHHHHT
T ss_pred ----e-------------------------------------------------------ecccCCCcccceECHhHhcC
Confidence 0 00011356889999999999
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... ..+..+..+..++......+...+||.+||+.||.+|||+.|+++
T Consensus 280 ~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 280 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999998 56554332 334444444333332233345569999999999999999999986
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-32 Score=293.43 Aligned_cols=206 Identities=15% Similarity=0.147 Sum_probs=160.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 96 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 171 (325)
T 3kul_A 96 DFLSEASIMGQFDHPNIIRLEG-VVTRGR---LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171 (325)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECGGG---CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEeCC---ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 46999999 799999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......... .+
T Consensus 172 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~----------- 209 (325)
T 3kul_A 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA-------------------------------AY----------- 209 (325)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCSSCEECC----C-------------------------------CE-----------
T ss_pred eeCCCCCcceEEECCCCCEEECCCCcccccccCccc-------------------------------ee-----------
Confidence 999999999999999999999999988543211000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 210 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 244 (325)
T 3kul_A 210 ---------------------------------------------TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM 244 (325)
T ss_dssp ---------------------------------------------ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHH
Confidence 00013468899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 245 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 245 WEVLAYGERPYWNMTNR-DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp HHHHTTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99997 56554443 344444444333333333345569999999999999999999986
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-32 Score=284.36 Aligned_cols=199 Identities=14% Similarity=0.187 Sum_probs=156.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+.. +++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 69 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 142 (287)
T 4f0f_A 69 EFQREVFIMSNLNHPNIVKLYG-LMHNPP-----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142 (287)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EETTTT-----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCchhhhe-eecCCC-----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 554442 799999 889999999776667999999999999999999999999
Q ss_pred --ceeccCCCCcEEEccCCc-----eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 142 --IVVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 142 --IvHrDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|+||||||+|||++.++. +||+|||.+......
T Consensus 143 ~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~---------------------------------------- 182 (287)
T 4f0f_A 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS---------------------------------------- 182 (287)
T ss_dssp SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC----------------------------------------
T ss_pred CCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc----------------------------------------
Confidence 999999999999988776 999888877321100
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc--CCCCCccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCAS 292 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~s~~s 292 (720)
.....||+.|+|||++. ...++.++
T Consensus 183 -----------------------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~ 209 (287)
T 4f0f_A 183 -----------------------------------------------------VSGLLGNFQWMAPETIGAEEESYTEKA 209 (287)
T ss_dssp -----------------------------------------------------EECCCCCCTTSCGGGSSCSSCEECHHH
T ss_pred -----------------------------------------------------ccccCCCccccCchhhccCCCCcCchh
Confidence 01146899999999994 34478999
Q ss_pred cchhhhchhhhccc---cCCCCchH-HHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 293 DIYRLGVLLFELFC---PFSTGEEK-TRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~-~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|||++ ||...... ......+.....++.+...++. ..+|+.+||+.||.+|||+.++++
T Consensus 210 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 210 DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999999999 67654322 2223333333444444444444 459999999999999999999986
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-32 Score=285.21 Aligned_cols=204 Identities=15% Similarity=0.174 Sum_probs=161.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 52 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (269)
T 4hcu_A 52 FIEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127 (269)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---ceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 447888999999999999999 554443 57999999 8999999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... .
T Consensus 128 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------~------------ 161 (269)
T 4hcu_A 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----------------------------------Y------------ 161 (269)
T ss_dssp CCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH----------------------------------H------------
T ss_pred ecCCcchheEEEcCCCCEEeccccccccccccc----------------------------------c------------
Confidence 999999999999999999999998874321110 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......+|+.|+|||++.+..++.++|||||||++|
T Consensus 162 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 198 (269)
T 4hcu_A 162 ------------------------T-------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 198 (269)
T ss_dssp ------------------------H-------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------c-------------------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHH
Confidence 0 000135688899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.+++++
T Consensus 199 ~ll~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 199 EVFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhcCCCCCCCCCCHH-HHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 9998 56554443 4444454443332222234455699999999999999999999873
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-32 Score=287.06 Aligned_cols=207 Identities=15% Similarity=0.198 Sum_probs=162.0
Q ss_pred hhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.++. ||||+++++ ++.... .+++|||| .+++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 71 ~~e~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i 145 (298)
T 1phk_A 71 LKEVDILRKVSGHPNIIQLKD-TYETNT---FFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNI 145 (298)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCEeeeee-eeccCC---eEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 37788888885 999999999 555443 68999999 789999999553 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 146 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------------- 178 (298)
T 1phk_A 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------------------------------------- 178 (298)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred ccCCCCcceEEEcCCCcEEEecccchhhcCCCc-----------------------------------------------
Confidence 999999999999999999999998874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc------CCCCCccccchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYR 296 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~------~~~~s~~sDIwS 296 (720)
......||+.|+|||++. ...++.++||||
T Consensus 179 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~s 214 (298)
T 1phk_A 179 --------------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214 (298)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHH
T ss_pred --------------------------------------------ccccccCCccccCHHHhccccccccccCCcccccHh
Confidence 001136799999999985 445899999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++|+|++ ||...... .....+.... ++......+ +...+|+.+||+.||.+|||+.|+|+||||++..
T Consensus 215 lG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 215 TGVIMYTLLAGSPPFWHRKQM-LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred HHHHHHHHHHCCCCCcCccHH-HHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 9999999999 66654443 2333333322 222222233 4455999999999999999999999999999763
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-32 Score=293.62 Aligned_cols=206 Identities=15% Similarity=0.174 Sum_probs=155.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..+|.+++||||+++++ ++.... ...+|+|||| .+++|.+++.... ..+++.+++.++.||+.||.|||++
T Consensus 54 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 131 (319)
T 4euu_A 54 QMREFEVLKKLNHKNIVKLFA-IEEETT-TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131 (319)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECTT-TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCcceEEE-EeecCC-CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 347888999999999999999 444332 2367999999 7899999995432 2389999999999999999999999
Q ss_pred CceeccCCCCcEEE----ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 141 GIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 141 gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+||||||+|||+ +..+.+||+|||++.......
T Consensus 132 ~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~----------------------------------------- 170 (319)
T 4euu_A 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------------------------------- 170 (319)
T ss_dssp TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC-----------------------------------------
T ss_pred CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC-----------------------------------------
Confidence 99999999999999 677789999888874321110
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc--------CCCC
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--------GAPV 288 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--------~~~~ 288 (720)
......||+.|+|||++. +..+
T Consensus 171 --------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 200 (319)
T 4euu_A 171 --------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKY 200 (319)
T ss_dssp --------------------------------------------------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCB
T ss_pred --------------------------------------------------ceeecccCCCccCHHHhhhccccccccCCC
Confidence 001146899999999986 4668
Q ss_pred Cccccchhhhchhhhccc---cCCCC---chHHHHHHHhhcCCCCc-----------------------cccccCc-hHH
Q 004989 289 SCASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPP-----------------------QLLLKFP-KEA 338 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt---pf~~~---~~~~~~~~~l~~~~~p~-----------------------~~~~~~p-~~~ 338 (720)
+.++|||||||++|||++ ||.+. ......+..+..+..+. .+....+ ...
T Consensus 201 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 280 (319)
T 4euu_A 201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLT 280 (319)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhH
Confidence 999999999999999999 66432 22223333333222111 1111112 234
Q ss_pred HHHHHcCCCCCCCCCChHHHHcCc
Q 004989 339 SFCLWLLHPEPSGRPKMGELLQSE 362 (720)
Q Consensus 339 ~Li~~~L~~dP~~Rpta~eiL~hp 362 (720)
+|+.+||++||++|||++|+|+||
T Consensus 281 ~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 281 PVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred HHHHHhccCChhhhccHHHhhhcc
Confidence 899999999999999999999987
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-32 Score=288.70 Aligned_cols=203 Identities=18% Similarity=0.169 Sum_probs=152.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++..+ .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 62 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (281)
T 1mp8_A 62 KFLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136 (281)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSS----SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCccceEEE-EEccC----ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 44332 46899999 888999999666556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 137 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 172 (281)
T 1mp8_A 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------------------------------------------- 172 (281)
T ss_dssp CCCSCCSGGGEEEEETTEEEECC---------------------------------------------------------
T ss_pred eecccccHHHEEECCCCCEEECccccccccCccccc--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 173 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 207 (281)
T 1mp8_A 173 ---------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 207 (281)
T ss_dssp ---------------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCcccccChhhcccCCCCCccCchHHHHHH
Confidence 00012468899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 208 ~ell~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 208 WEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCcCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99996 66654433 233344433333322233344569999999999999999999985
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-33 Score=296.41 Aligned_cols=215 Identities=14% Similarity=0.157 Sum_probs=156.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.++. .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 53 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 128 (310)
T 3s95_A 53 TFLKEVKVMRCLEHPNVLKFIG-VLYKDK---RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128 (310)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCcccEEE-EEecCC---eeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 554443 57999999 899999999765666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+........... +....
T Consensus 129 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-------------------------------~~~~~------ 171 (310)
T 3s95_A 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE-------------------------------GLRSL------ 171 (310)
T ss_dssp EECSCCSTTSEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc-------------------------------ccccc------
Confidence 99999999999999999999999998854422210000 00000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
............||+.|+|||++.+..++.++|||||||++
T Consensus 172 ---------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 212 (310)
T 3s95_A 172 ---------------------------------------KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212 (310)
T ss_dssp -----------------------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------cccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 00000001125799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHH----HHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~----~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||....... ...........++. ..+...+|+.+||+.||.+|||+.++++
T Consensus 213 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 213 CEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPN---CPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTT---CCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcCCCCCcchhhhHHHHhhhhhccccccCCCC---CCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99998 443321100 00001111111221 2244569999999999999999999986
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-32 Score=298.71 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=161.4
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC------------------------
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR------------------------ 116 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~------------------------ 116 (720)
+..+|..+|.++ +|||||++++ ++.... ..+++|||| .|++|.+++.....
T Consensus 71 ~~~~E~~~l~~l~~hpniv~~~~-~~~~~~--~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (359)
T 3vhe_A 71 ALMSELKILIHIGHHLNVVNLLG-ACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147 (359)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSTT--SCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------
T ss_pred HHHHHHHHHHhhcCCcceeeeee-eeecCC--CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccch
Confidence 445788889998 8999999999 444432 246999999 88999999954322
Q ss_pred -----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 004989 117 -----------------------------------------SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 155 (720)
Q Consensus 117 -----------------------------------------~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~ 155 (720)
.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~ 227 (359)
T 3vhe_A 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 227 (359)
T ss_dssp ------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred hhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc
Confidence 289999999999999999999999999999999999999
Q ss_pred cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccc
Q 004989 156 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 235 (720)
Q Consensus 156 ~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~ 235 (720)
.++.+||+|||++....... +.
T Consensus 228 ~~~~~kl~Dfg~a~~~~~~~---------------------------------~~------------------------- 249 (359)
T 3vhe_A 228 EKNVVKICDFGLARDIYKDP---------------------------------DY------------------------- 249 (359)
T ss_dssp GGGCEEECCCGGGSCTTSCT---------------------------------TC-------------------------
T ss_pred CCCcEEEEeccceeeecccc---------------------------------cc-------------------------
Confidence 99999999999884331110 00
Q ss_pred cccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCC
Q 004989 236 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTG 311 (720)
Q Consensus 236 ~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~ 311 (720)
.......||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 250 ------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 299 (359)
T 3vhe_A 250 ------------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299 (359)
T ss_dssp ------------------------------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ------------------------------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence 00011467999999999998889999999999999999997 66665
Q ss_pred chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 312 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 312 ~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
.........+.....++......+...+|+.+||++||.+|||+.|+++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 300 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 44444444554443333333334556699999999999999999999973
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-33 Score=299.78 Aligned_cols=206 Identities=16% Similarity=0.242 Sum_probs=137.7
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.+..+.||||+++++.+.........+++|||| .|++|.+++... ...+++.+++.++.||+.||.|||++||+||||
T Consensus 75 ~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dl 154 (336)
T 3fhr_A 75 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDV 154 (336)
T ss_dssp HHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred HHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 456689999999999433323223458999999 788999999554 346999999999999999999999999999999
Q ss_pred CCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 148 RPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 148 KP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||+|||++. ++.+||+|||++.......
T Consensus 155 kp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 185 (336)
T 3fhr_A 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNA------------------------------------------------- 185 (336)
T ss_dssp SGGGEEESCSSTTCCEEECCCTTCEEC-----------------------------------------------------
T ss_pred CHHHEEEEecCCCceEEEeccccceeccccc-------------------------------------------------
Confidence 999999986 4459999888873221100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.....||+.|+|||++.+..++.++|||||||++|+|
T Consensus 186 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l 222 (336)
T 3fhr_A 186 -------------------------------------------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 222 (336)
T ss_dssp -------------------------------------------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHH
Confidence 0013679999999999888899999999999999999
Q ss_pred cc---cCCCCchHHH---HHHHhhc--CCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 305 FC---PFSTGEEKTR---TMSSLRH--RVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~---~~~~l~~--~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++ ||........ ....+.. ..++......+ +...+||.+||+.||.+|||+.|+|+||||+..
T Consensus 223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 223 LCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp HHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred HHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 99 5544322111 0111111 12222222233 445599999999999999999999999999875
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=288.90 Aligned_cols=209 Identities=16% Similarity=0.107 Sum_probs=155.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.++..+. ..+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 57 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (295)
T 3ugc_A 57 DFEREIEILKSLQHDNIVKYKGVCYSAGR--RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134 (295)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEECHHHH--TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEecCCC--CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 44578889999999999999994333221 247999999 799999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......... +
T Consensus 135 ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 171 (295)
T 3ugc_A 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF--------------------------------F----------- 171 (295)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCCSCC----------------------------------------------------
T ss_pred cccCCCCHhhEEEcCCCeEEEccCcccccccCCcce--------------------------------e-----------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......+|+.|+|||++.+..++.++|||||||++
T Consensus 172 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 207 (295)
T 3ugc_A 172 --------------------------------------------KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207 (295)
T ss_dssp ------------------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHH
Confidence 000113567889999999988899999999999999
Q ss_pred hhccccCCCCchH------------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFCPFSTGEEK------------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~~~~------------------~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+.... ......+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 208 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 208 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9999932221111 0122222222222222223344569999999999999999999985
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-32 Score=293.80 Aligned_cols=204 Identities=15% Similarity=0.117 Sum_probs=159.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++... ..++++|| .+++|.+++......+++..++.|+.||+.||.|||++|
T Consensus 63 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 137 (327)
T 3poz_A 63 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137 (327)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecC----CeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4457888999999999999999 55544 25788888 999999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++..+.....
T Consensus 138 ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 173 (327)
T 3poz_A 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-------------------------------------------- 173 (327)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC---------------------------------------------
T ss_pred eeCCCCChheEEECCCCCEEEccCcceeEccCCccc--------------------------------------------
Confidence 999999999999999999999999987432211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 174 --------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 209 (327)
T 3poz_A 174 --------------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209 (327)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCccccccChHHhccCCCCchhhhhhhHHHH
Confidence 000113568899999999999899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 210 ~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 271 (327)
T 3poz_A 210 WELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred HHHHhcCCCCccCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99998 56554333 233334433333333334455669999999999999999999986
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-32 Score=282.90 Aligned_cols=204 Identities=15% Similarity=0.166 Sum_probs=159.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++...+..+++.+++.++.||+.||.|||++||
T Consensus 50 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 125 (268)
T 3sxs_A 50 FFQEAQTMMKLSHPKLVKFYG-VCSKEY---PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF 125 (268)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEccCC---ceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347778999999999999999 554443 57999999 7999999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 126 ~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~--------------------------------------------- 160 (268)
T 3sxs_A 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV--------------------------------------------- 160 (268)
T ss_dssp EESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE---------------------------------------------
T ss_pred ecCCcCcceEEECCCCCEEEccCccceecchhhhh---------------------------------------------
Confidence 99999999999999999999999987432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 161 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 196 (268)
T 3sxs_A 161 --------------------------------------------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMW 196 (268)
T ss_dssp --------------------------------------------ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHH
Confidence 000124678899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|++ ||....... ....+.....+.......+...+|+.+||+.||.+|||+.+++++
T Consensus 197 ~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 197 EVFSLGKMPYDLYTNSE-VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHTTTCCTTTTSCHHH-HHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCCCCccccChHH-HHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9997 666554443 333333332222222233455699999999999999999999973
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-32 Score=283.99 Aligned_cols=200 Identities=17% Similarity=0.220 Sum_probs=153.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.... .+++|||| .|++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 52 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ 125 (271)
T 3dtc_A 52 NVRQEAKLFAMLKHPNIIALRG-VCLKEP---NLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEA 125 (271)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECCC-----CEEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHhcCCCCEeeEEE-EEecCC---ceEEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447778999999999999999 555443 46999999 89999999853 34999999999999999999999999
Q ss_pred ---ceeccCCCCcEEEcc--------CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 142 ---IVVHNVRPSCFVMSS--------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 142 ---IvHrDLKP~NILl~~--------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
|+||||||+|||++. ++.++|+|||.+.......
T Consensus 126 ~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----------------------------------- 170 (271)
T 3dtc_A 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT----------------------------------- 170 (271)
T ss_dssp SSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------------------------------------
T ss_pred CCceeecCCchHHEEEecccccccccCcceEEccCCccccccccc-----------------------------------
Confidence 899999999999985 6789998888773321100
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
.....||+.|+|||.+.+..++.
T Consensus 171 ---------------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~ 193 (271)
T 3dtc_A 171 ---------------------------------------------------------KMSAAGAYAWMAPEVIRASMFSK 193 (271)
T ss_dssp --------------------------------------------------------------CCGGGSCHHHHHHCCCSH
T ss_pred ---------------------------------------------------------ccCCCCccceeCHHHhccCCCCc
Confidence 00136799999999999888999
Q ss_pred cccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
++|||||||++|+|++ ||................ ........++ ...+|+.+||+.||.+|||+.|++++
T Consensus 194 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 194 GSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK-LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSC-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCC-CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 9999999999999999 776655543333333333 3333333444 45599999999999999999999863
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-32 Score=289.01 Aligned_cols=215 Identities=12% Similarity=0.059 Sum_probs=154.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCC---CcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~---~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~a 133 (720)
+..+|..++.+++||||+++++ ++...... ...+++||| .+++|.+++.. ....+++.+++.++.||+.|
T Consensus 71 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a 149 (323)
T 3qup_A 71 EFLREAACMKEFDHPHVAKLVG-VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149 (323)
T ss_dssp HHHHHHHHHTTCCCTTBCCCCE-EEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCceehhhc-eeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHH
Confidence 4458888999999999999999 44333221 235899999 89999999932 12258999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 150 l~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------ 193 (323)
T 3qup_A 150 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY------------------------------------ 193 (323)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------------------
T ss_pred HHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccc------------------------------------
Confidence 99999999999999999999999999999999988433111000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+|+.|+|||++.+..++.++|
T Consensus 194 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 221 (323)
T 3qup_A 194 ----------------------------------------------------RQGCASKLPVKWLALESLADNLYTVHSD 221 (323)
T ss_dssp -----------------------------------------------------------CCGGGCCHHHHHHCCCCHHHH
T ss_pred ----------------------------------------------------cccccccCcccccCchhhcCCCCCCccc
Confidence 0000134688999999999988999999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC-------hHHHHcCc
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-------MGELLQSE 362 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt-------a~eiL~hp 362 (720)
||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+||| +++++.||
T Consensus 222 i~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 222 VWAFGVTMWEIMTRGQTPYAGIENA-EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hhhHHHHHHHHHhCCCCCccccChH-HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 9999999999998 55554433 333334333333333333445569999999999999999 77778899
Q ss_pred ccCCC
Q 004989 363 FLNEP 367 (720)
Q Consensus 363 ~~~~~ 367 (720)
|+...
T Consensus 301 ~~~~~ 305 (323)
T 3qup_A 301 SVLST 305 (323)
T ss_dssp -----
T ss_pred hhcCC
Confidence 98875
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=283.71 Aligned_cols=215 Identities=16% Similarity=0.185 Sum_probs=162.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.++ .. ....+|+||||..++|.+++. .....+++..++.++.||+.||.|||++|
T Consensus 52 ~~~~E~~~l~~l~h~~i~~~~~~~~-~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 129 (305)
T 2wtk_C 52 NVKKEIQLLRRLRHKNVIQLVDVLY-NE-EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG 129 (305)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEE-CC----CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCeeEEEEEEE-cC-CCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447788999999999999999433 22 223689999995566888884 33456999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 130 i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------- 165 (305)
T 2wtk_C 130 IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD-------------------------------------------- 165 (305)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSS--------------------------------------------
T ss_pred eeecCCCcccEEEcCCCcEEeeccccccccCccccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchhhhc
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+.. ++.++|||||||
T Consensus 166 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~ 201 (305)
T 2wtk_C 166 --------------------------------------------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGV 201 (305)
T ss_dssp --------------------------------------------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHH
Confidence 0001136899999999998754 478999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||...... .....+.....+ ......+...+||.+||+.||.+|||+.|+++||||+....
T Consensus 202 il~~l~~g~~p~~~~~~~-~~~~~i~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 202 TLYNITTGLYPFEGDNIY-KLFENIGKGSYA-IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp HHHHHHHSSCSCCCSSHH-HHHHHHHHCCCC-CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred HHHHHHhCCCCCCCchHH-HHHHHHhcCCCC-CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 9999999 66654433 344444443222 11122344569999999999999999999999999987644
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-32 Score=286.95 Aligned_cols=210 Identities=17% Similarity=0.126 Sum_probs=158.9
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..+|.+++||||+++++ ++.... ...++++||| .+++|.+++......+++..++.++.||+.||.|||++
T Consensus 68 ~~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 145 (302)
T 4e5w_A 68 ADLKKEIEILRNLYHENIVKYKG-ICTEDG-GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR 145 (302)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEE-EEEC----CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCeeeeee-EEecCC-CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC
Confidence 34457888999999999999999 444332 2358999999 78999999955555699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||.+......... +
T Consensus 146 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~---------- 183 (302)
T 4e5w_A 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY--------------------------------Y---------- 183 (302)
T ss_dssp TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCE--------------------------------E----------
T ss_pred CcccCCCchheEEEcCCCCEEECcccccccccCCCcc--------------------------------e----------
Confidence 9999999999999999999999999988443221000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.......||+.|+|||++.+..++.++|||||||+
T Consensus 184 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 218 (302)
T 4e5w_A 184 ---------------------------------------------TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVT 218 (302)
T ss_dssp ---------------------------------------------ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred ---------------------------------------------eccCCCCCCccccCCeeecCCCCCcchhHHHHHHH
Confidence 00011357889999999998889999999999999
Q ss_pred hhhccccCCC-----------------CchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFCPFST-----------------GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLltpf~~-----------------~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+|+++..+ ..........+......+......+...+|+.+||+.||.+|||+.++++
T Consensus 219 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 219 LHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 9999993221 12222333333333333322233345569999999999999999999986
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=299.15 Aligned_cols=212 Identities=14% Similarity=0.146 Sum_probs=161.3
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVE 132 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~ 132 (720)
...+..+|..+|.+++|||||++++ ++.... ..|+|||| .|++|.+++.... ..+++.+++.++.||+.
T Consensus 117 ~~~~~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~ 192 (367)
T 3l9p_A 117 DELDFLMEALIISKFNHQNIVRCIG-VSLQSL---PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192 (367)
T ss_dssp HHHHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCeEEE-EEecCC---CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHH
Confidence 3335557888999999999999999 554443 45999999 7999999994322 35899999999999999
Q ss_pred HHHHHHHCCceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccc
Q 004989 133 IVYAAHSQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
||.|||++||+||||||+|||++.++ .+||+|||+++..... .
T Consensus 193 aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~----------------------------------~ 238 (367)
T 3l9p_A 193 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA----------------------------------G 238 (367)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHH----------------------------------S
T ss_pred HHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccc----------------------------------c
Confidence 99999999999999999999999555 4999988887321000 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCC
Q 004989 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s 289 (720)
. ........||+.|+|||++.+..++
T Consensus 239 ~------------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~ 264 (367)
T 3l9p_A 239 Y------------------------------------------------------YRKGGCAMLPVKWMPPEAFMEGIFT 264 (367)
T ss_dssp S------------------------------------------------------CTTCCGGGSCGGGCCHHHHHHCCCC
T ss_pred c------------------------------------------------------cccCCCcCCcccEECHHHhcCCCCC
Confidence 0 0000114679999999999888899
Q ss_pred ccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.+|+++.++
T Consensus 265 ~~~DvwslG~il~ellt~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 265 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 99999999999999997 56554443 4444444443333222233445699999999999999999999987654
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=285.12 Aligned_cols=207 Identities=18% Similarity=0.199 Sum_probs=161.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|++||| .+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 67 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ 141 (287)
T 2wei_A 67 TILREVELLKKLDHPNIMKLFE-ILEDSS---SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHN 141 (287)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCccEEEE-EEeCCC---eEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447888999999999999999 554443 67999999 8999999985433 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC---CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~---~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||+++.+ +.+||+|||.+.......
T Consensus 142 i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------- 178 (287)
T 2wei_A 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT------------------------------------------- 178 (287)
T ss_dssp CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS-------------------------------------------
T ss_pred eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC-------------------------------------------
Confidence 9999999999999754 469999888774321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 179 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG 209 (287)
T 2wei_A 179 ------------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAG 209 (287)
T ss_dssp ------------------------------------------------SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCcccccChHHhcCC-CCCchhhHhHH
Confidence 00013578999999999765 89999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCc---cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+..+. ......+...+||.+||++||.+|||+.|+|+||||++.
T Consensus 210 ~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 210 VILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 99999999 66655443 3444444443322 222233445699999999999999999999999999764
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-32 Score=297.15 Aligned_cols=205 Identities=19% Similarity=0.227 Sum_probs=153.6
Q ss_pred hhhhhcccCC-CC-----CceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGD-HL-----RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~-Hp-----nIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..++..+. |+ +|+++++ ++.... .+|+||||.+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 99 ~e~~~l~~l~~~~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH 174 (382)
T 2vx3_A 99 IEVRLLELMNKHDTEMKYYIVHLKR-HFMFRN---HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA 174 (382)
T ss_dssp HHHHHHHHHHHCSSGGGGGBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccccceeEEEeee-eeccCC---ceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4555665554 44 4888888 444443 68999999777999999543 345999999999999999999999
Q ss_pred --HCCceeccCCCCcEEEc--cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 139 --SQGIVVHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 139 --s~gIvHrDLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
..|||||||||+|||++ .++.+||+|||++...+..
T Consensus 175 ~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~---------------------------------------- 214 (382)
T 2vx3_A 175 TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---------------------------------------- 214 (382)
T ss_dssp STTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC----------------------------------------
T ss_pred cCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc----------------------------------------
Confidence 57999999999999995 4778999998887432111
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
....+||+.|+|||++.+..++.++||
T Consensus 215 -----------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di 241 (382)
T 2vx3_A 215 -----------------------------------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDM 241 (382)
T ss_dssp -----------------------------------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHH
T ss_pred -----------------------------------------------------cccccCCccccChHHHcCCCCCcHHHH
Confidence 011468999999999999999999999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhc-CCCCcccccc-------------------------------------
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLK------------------------------------- 333 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~------------------------------------- 333 (720)
|||||++|||++ ||............+.. +..++.....
T Consensus 242 wSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 321 (382)
T 2vx3_A 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLH 321 (382)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHH
Confidence 999999999999 77665544332222211 1111110000
Q ss_pred ------------------------CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 334 ------------------------FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 334 ------------------------~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+...+||.+||++||++|||+.|+|+||||+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 322 NILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred HHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 0144699999999999999999999999999875
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-32 Score=291.88 Aligned_cols=204 Identities=14% Similarity=0.188 Sum_probs=151.4
Q ss_pred hhhhhcccCCCCC------ceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~Hpn------IV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..++.++.|++ |+.+++ ++.... .+|+||||.+++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 65 ~E~~~l~~l~~~~~~~~~~~~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH 140 (355)
T 2eu9_A 65 LEINVLKKIKEKDKENKFLCVLMSD-WFNFHG---HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 140 (355)
T ss_dssp HHHHHHHHHHHHCTTSCSCBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCceeEEEeee-eeeeCC---eEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5666777777666 888888 454443 6899999988888888844 3356999999999999999999999
Q ss_pred HCCceeccCCCCcEEEc-------------------cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhh
Q 004989 139 SQGIVVHNVRPSCFVMS-------------------SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~-------------------~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
++||+||||||+|||+. .++.+||+|||++...
T Consensus 141 ~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~---------------------------- 192 (355)
T 2eu9_A 141 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFD---------------------------- 192 (355)
T ss_dssp TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEET----------------------------
T ss_pred HCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccc----------------------------
Confidence 99999999999999994 4455666555554211
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004989 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
... .....||+.|+|
T Consensus 193 -----------------~~~------------------------------------------------~~~~~gt~~y~a 207 (355)
T 2eu9_A 193 -----------------HEH------------------------------------------------HTTIVATRHYRP 207 (355)
T ss_dssp -----------------TSC------------------------------------------------CCSSCSCGGGCC
T ss_pred -----------------ccc------------------------------------------------ccCCcCCCcccC
Confidence 000 011468999999
Q ss_pred cccccCCCCCccccchhhhchhhhccc---cCCCCchHHH--HHHHhhcCCCCccccc----------------------
Q 004989 280 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLLL---------------------- 332 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~--~~~~l~~~~~p~~~~~---------------------- 332 (720)
||++.+..++.++|||||||++|||++ ||........ .+..+. +.+|..+..
T Consensus 208 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
T 2eu9_A 208 PEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDG 286 (355)
T ss_dssp HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHH
T ss_pred CeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchh
Confidence 999999889999999999999999999 6665443321 122221 222221100
Q ss_pred -------------------cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 333 -------------------KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 -------------------~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 287 RYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340 (355)
T ss_dssp HHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred ccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence 01234599999999999999999999999999986
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-32 Score=283.47 Aligned_cols=209 Identities=14% Similarity=0.078 Sum_probs=160.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+... ..+++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 68 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~--~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 144 (298)
T 3pls_A 68 AFLREGLLMRGLNHPNVLALIG-IMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCE-EECCSSS--CCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEecCCC--CcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 5544332 34899999 899999999776677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... .
T Consensus 145 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~------------ 181 (298)
T 3pls_A 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYY-------------------------------S------------ 181 (298)
T ss_dssp CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG-------------------------------C------------
T ss_pred cccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc-------------------------------c------------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........+|+.|+|||.+.+..++.++|||||||++
T Consensus 182 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 218 (298)
T 3pls_A 182 -------------------------------------------VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLL 218 (298)
T ss_dssp -------------------------------------------SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCcCCCCCccccChhhhccCCCChhhchhhHHHHH
Confidence 0000113578999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ |+............+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 219 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 219 WELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp HHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999 333333333344444443333332223344569999999999999999999986
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-32 Score=284.84 Aligned_cols=207 Identities=16% Similarity=0.136 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.++..+. ..+++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 72 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~ 148 (298)
T 3f66_A 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEECCSSS---CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeeeeEEEcCCC---ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 44578889999999999999994344332 46899999 888999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 149 i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~------------ 185 (298)
T 3f66_A 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY-------------------------------S------------ 185 (298)
T ss_dssp CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC-------------------------------B------------
T ss_pred ccCCCCchheEEECCCCCEEECcccccccccccchh-------------------------------c------------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........||+.|+|||.+.+..++.++|||||||++
T Consensus 186 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 222 (298)
T 3f66_A 186 -------------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 222 (298)
T ss_dssp -------------------------------------------C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHH
Confidence 0000113578999999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....+.. +..+| ...+|+.+||++||.+|||+.|+++
T Consensus 223 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 223 WELMTRGAPPYPDVNTF-DITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp HHHHTTSCCSSTTSCTT-THHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCccCCHH-HHHHHHhcCCCCCC-CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 44443332 22222322222222 22333 4559999999999999999999986
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-32 Score=289.64 Aligned_cols=205 Identities=15% Similarity=0.107 Sum_probs=157.9
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..+|.+++||||+++++ ++... ..++++|| .+++|.+++......+++..++.|+.||+.||.|||++
T Consensus 62 ~~~~~E~~~l~~l~hp~iv~~~~-~~~~~----~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 136 (327)
T 3lzb_A 62 KEILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136 (327)
T ss_dssp HHHHHHHHHHTTCCBTTBCCCCE-EEESS----SEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCeeEEEE-EEecC----CceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 34457888999999999999999 55544 26788888 99999999976666699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++...+..... .
T Consensus 137 ~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~--------------------------------~---------- 174 (327)
T 3lzb_A 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--------------------------------Y---------- 174 (327)
T ss_dssp TCCCSCCCGGGEEEEETTEEEECCTTC-----------------------------------------------------
T ss_pred CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc--------------------------------c----------
Confidence 9999999999999999999999999988543221000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 175 ----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i 208 (327)
T 3lzb_A 175 ----------------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT 208 (327)
T ss_dssp ---------------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCCccccccCHHHHcCCCCChHHHHHHHHHH
Confidence 0001356889999999999889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 209 l~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 209 VWELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 999998 56554333 233344444333333334455669999999999999999999986
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-32 Score=288.45 Aligned_cols=207 Identities=16% Similarity=0.185 Sum_probs=154.0
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-Ccee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvH 144 (720)
.+..++..++||||+++++ ++.... .+|+||||.++.+..++......+++..++.++.||+.||.|||++ ||+|
T Consensus 73 ~~~~~~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H 148 (318)
T 2dyl_A 73 DLDVVLKSHDCPYIVQCFG-TFITNT---DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIH 148 (318)
T ss_dssp HHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHhcCCCceeeEEE-EEecCC---cEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEe
Confidence 3344678899999999999 554443 6899999987777776654445699999999999999999999995 9999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.+||+|||.+.......
T Consensus 149 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------- 179 (318)
T 2dyl_A 149 RDVKPSNILLDERGQIKLCDFGISGRLVDDK------------------------------------------------- 179 (318)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTC--------------------------------------------------------
T ss_pred CCCCHHHEEECCCCCEEEEECCCchhccCCc-------------------------------------------------
Confidence 9999999999999999999998873321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++. +..++.++|||||||
T Consensus 180 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~ 217 (318)
T 2dyl_A 180 ------------------------------------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGI 217 (318)
T ss_dssp -------------------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCccccChhhcccccccccCCccccchhhHHH
Confidence 000136799999999995 445899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCcc--ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~--~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||.........+..+.....+.. .....+...+||.+||+.||.+|||+.++++||||+..
T Consensus 218 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 218 SLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp HHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 9999999 77664444344444443322211 11223455699999999999999999999999999754
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=283.65 Aligned_cols=204 Identities=16% Similarity=0.204 Sum_probs=160.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 66 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 141 (283)
T 3gen_A 66 FIEEAKVMMNLSHEKLVQLYG-VCTKQR---PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141 (283)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCEeeEEE-EEecCC---CeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347788999999999999999 554443 57999999 7999999997655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... .
T Consensus 142 ~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------------------------~------------ 175 (283)
T 3gen_A 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----------------------------------Y------------ 175 (283)
T ss_dssp CCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH----------------------------------H------------
T ss_pred cCCCCccceEEEcCCCCEEEccccccccccccc----------------------------------c------------
Confidence 999999999999999999999998874321110 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......+|+.|+|||++.+..++.++|||||||++|
T Consensus 176 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 212 (283)
T 3gen_A 176 ------------------------T-------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMW 212 (283)
T ss_dssp ------------------------H-------------------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred ------------------------c-------------------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHH
Confidence 0 000134688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++|
T Consensus 213 ~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 213 EIYSLGKMPYERFTNS-ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHhCCCCCccccChh-HHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9997 66655443 3444444433222222233455699999999999999999999963
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-32 Score=292.01 Aligned_cols=207 Identities=15% Similarity=0.126 Sum_probs=161.0
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC----------------------CC
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR----------------------SV 118 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~----------------------~l 118 (720)
+..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++..... .+
T Consensus 94 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (344)
T 1rjb_A 94 ALMSELKMMTQLGSHENIVNLLG-ACTLSG---PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169 (344)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred HHHHHHHHHHhhcCCCCeeeEEE-EEeeCC---ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence 445788899999 9999999999 554443 57999999 89999999955432 37
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 170 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~----------------------- 226 (344)
T 1rjb_A 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS----------------------- 226 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCT-----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCc-----------------------
Confidence 899999999999999999999999999999999999999999999999884321110
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.. .......||+.|+
T Consensus 227 ----------~~-------------------------------------------------------~~~~~~~~t~~y~ 241 (344)
T 1rjb_A 227 ----------NY-------------------------------------------------------VVRGNARLPVKWM 241 (344)
T ss_dssp ----------TS-------------------------------------------------------EEETTEEECGGGC
T ss_pred ----------cc-------------------------------------------------------eeccCccCccCcc
Confidence 00 0001135788999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||
T Consensus 242 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 242 APESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 9999988889999999999999999997 676654443444444444333332233345569999999999999999
Q ss_pred hHHHHcC
Q 004989 355 MGELLQS 361 (720)
Q Consensus 355 a~eiL~h 361 (720)
+.+++++
T Consensus 322 ~~~l~~~ 328 (344)
T 1rjb_A 322 FPNLTSF 328 (344)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999973
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-32 Score=298.60 Aligned_cols=204 Identities=16% Similarity=0.179 Sum_probs=158.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.+++...+..+++..++.++.||+.||.|||++|
T Consensus 158 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 233 (377)
T 3cbl_A 158 KFLQEARILKQYSHPNIVRLIG-VCTQKQ---PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233 (377)
T ss_dssp TTTHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEecCC---CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 554443 57999999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 234 ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~-------------------------------------------- 269 (377)
T 3cbl_A 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA-------------------------------------------- 269 (377)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE--------------------------------------------
T ss_pred cCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee--------------------------------------------
Confidence 999999999999999999999999887432110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......+++.|+|||++.+..++.++|||||||++
T Consensus 270 ---------------------------~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 305 (377)
T 3cbl_A 270 ---------------------------A-----------------SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL 305 (377)
T ss_dssp ---------------------------C-----------------CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ---------------------------e-----------------cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHH
Confidence 0 00002357789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++. +..+| ...+||.+||+.||.+|||+.++++
T Consensus 306 ~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 306 WETFSLGASPYPNLSNQ-QTREFVEKGGRLPC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HHHHTTSCCSSTTSCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99997 66655443 33333443332222 23344 4459999999999999999999985
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-32 Score=285.51 Aligned_cols=196 Identities=17% Similarity=0.226 Sum_probs=153.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.++. ..++|||| .|++|.+++......+++..++.++.||+.||.|||++|
T Consensus 58 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 133 (289)
T 4fvq_A 58 SFFEAASMMSKLSHKHLVLNYG-VCVCGD---ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT 133 (289)
T ss_dssp HHHHHHHHHHTSCCTTBCCEEE-EECCTT---CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEEeCC---CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3447888999999999999999 555443 45899999 789999999766556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc--------eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 142 IVVHNVRPSCFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~--------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|+||||||+|||++.++. +||+|||.+......
T Consensus 134 ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------------------- 174 (289)
T 4fvq_A 134 LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK--------------------------------------- 174 (289)
T ss_dssp CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH---------------------------------------
T ss_pred eECCCcCcceEEEecCCcccccccceeeeccCcccccccCc---------------------------------------
Confidence 999999999999998887 888777766221000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCAS 292 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~s 292 (720)
....||+.|+|||++.+ ..++.++
T Consensus 175 -------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~ 199 (289)
T 4fvq_A 175 -------------------------------------------------------DILQERIPWVPPECIENPKNLNLAT 199 (289)
T ss_dssp -------------------------------------------------------HHHHHTTTTSCHHHHHCGGGCCHHH
T ss_pred -------------------------------------------------------cccCCcCcccCHHHhCCCCCCCchh
Confidence 01356889999999988 5589999
Q ss_pred cchhhhchhhhccc----cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|||++ ||...... ........ ..+++. ..+...+|+.+||++||.+|||+.++++
T Consensus 200 DiwslG~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 268 (289)
T 4fvq_A 200 DKWSFGTTLWEICSGGDKPLSALDSQ-RKLQFYEDRHQLPAP---KAAELANLINNCMDYEPDHRPSFRAIIR 268 (289)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCC---SSCTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCccccchH-HHHHHhhccCCCCCC---CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999999 33333322 22222222 222222 2345579999999999999999999997
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-32 Score=298.15 Aligned_cols=212 Identities=10% Similarity=0.090 Sum_probs=156.1
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.+...+..++||||+++++.+..........|+||||.|++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 97 ~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHr 176 (364)
T 3op5_A 97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHG 176 (364)
T ss_dssp HHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEe
Confidence 44556788999999999995555444344689999999999999997665679999999999999999999999999999
Q ss_pred cCCCCcEEEc--cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 146 NVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 146 DLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|||++ .++.+||+|||+++........ ..+
T Consensus 177 Dlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~------------------------------~~~------------- 213 (364)
T 3op5_A 177 DIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH------------------------------KAY------------- 213 (364)
T ss_dssp CCCGGGEEEESSCTTCEEECCCTTCEESSGGGCC------------------------------CCS-------------
T ss_pred cCCHHHEEEecCCCCeEEEEECCcceecccCCcc------------------------------ccc-------------
Confidence 9999999999 8899999999988543211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 214 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~e 253 (364)
T 3op5_A 214 ----------------------------------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ 253 (364)
T ss_dssp ----------------------------------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHH
Confidence 0000012468999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhh---cCCCCccc-----cccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC---PFSTGEEKTRTMSSLR---HRVLPPQL-----LLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~---~~~~p~~~-----~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||.............. ...++..+ ....| ...+|+.+||..||.+||++.+|++
T Consensus 254 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 254 WLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 999 6653211111111111 00111100 02223 4459999999999999999999875
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-32 Score=284.12 Aligned_cols=205 Identities=18% Similarity=0.266 Sum_probs=155.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ +.... .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 66 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ 140 (289)
T 3og7_A 66 AFKNEVGVLRKTRHVNILLFMG-YSTAP----QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140 (289)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcEEEEEe-eccCC----ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 44332 46899999 889999999666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++.........
T Consensus 141 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 176 (289)
T 3og7_A 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS-------------------------------------------- 176 (289)
T ss_dssp CCCSCCCGGGEEEETTTEEEECCCC-------------------------------------------------------
T ss_pred cccccCccceEEECCCCCEEEccceecccccccccc--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++. +..++.++||||||
T Consensus 177 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG 212 (289)
T 3og7_A 177 --------------------------------------------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212 (289)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCccccCchhhcccCCCCCCcccchHHHH
Confidence 0001146899999999996 55589999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccc---cccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~---~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||............+.....++.+ ...+|. ..+|+.+||+.||.+|||+.++++
T Consensus 213 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp HHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999 777665555555555554444332 233444 459999999999999999999986
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-32 Score=297.86 Aligned_cols=211 Identities=20% Similarity=0.256 Sum_probs=155.0
Q ss_pred hhhhhhcccCC-----------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGD-----------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVE 132 (720)
Q Consensus 65 ~~e~~~L~~l~-----------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~ 132 (720)
.+|..++.++. ||||+++++.+.........++++|||.+++|.+++.. ....+++..++.++.||+.
T Consensus 63 ~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~ 142 (373)
T 1q8y_A 63 EDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 142 (373)
T ss_dssp HHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHH
Confidence 35666666665 89999999955544444557899999999999999954 3445999999999999999
Q ss_pred HHHHHHHC-CceeccCCCCcEEEcc------CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 133 IVYAAHSQ-GIVVHNVRPSCFVMSS------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 133 aL~yLHs~-gIvHrDLKP~NILl~~------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
||.|||++ ||+||||||+|||++. .+.+||+|||++...+..
T Consensus 143 aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~------------------------------- 191 (373)
T 1q8y_A 143 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH------------------------------- 191 (373)
T ss_dssp HHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC-------------------------------
T ss_pred HHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC-------------------------------
Confidence 99999998 9999999999999953 347899888876322100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.....||+.|+|||++.+
T Consensus 192 --------------------------------------------------------------~~~~~~t~~y~aPE~~~~ 209 (373)
T 1q8y_A 192 --------------------------------------------------------------YTNSIQTREYRSPEVLLG 209 (373)
T ss_dssp --------------------------------------------------------------CCSCCSCGGGCCHHHHHT
T ss_pred --------------------------------------------------------------CCCCCCCccccCcHHHhC
Confidence 011367999999999999
Q ss_pred CCCCccccchhhhchhhhccc---cCCCCchH-----HHHHHHhhc--CCCCccc-------------------------
Q 004989 286 APVSCASDIYRLGVLLFELFC---PFSTGEEK-----TRTMSSLRH--RVLPPQL------------------------- 330 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt---pf~~~~~~-----~~~~~~l~~--~~~p~~~------------------------- 330 (720)
..++.++|||||||++|||++ ||...... ......+.. +.+|+.+
T Consensus 210 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (373)
T 1q8y_A 210 APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKF 289 (373)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCB
T ss_pred CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccc
Confidence 999999999999999999999 66543210 111111110 1111110
Q ss_pred -------------ccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 331 -------------LLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 331 -------------~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
... .+...+||.+||++||.+|||+.|+|+||||+...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 341 (373)
T 1q8y_A 290 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341 (373)
T ss_dssp CCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred cchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence 011 12334999999999999999999999999999863
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-32 Score=296.31 Aligned_cols=208 Identities=15% Similarity=0.124 Sum_probs=153.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.++..+. ..|+|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 136 ~~~~E~~il~~l~hpnIv~~~~~~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 212 (373)
T 3c1x_A 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212 (373)
T ss_dssp HHHHHHTTSTTCCCTTBCCCCEEECCCSS---CCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEcCCC---CeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 44578889999999999999994343332 46899999 889999999777677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........ .
T Consensus 213 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--------------------------------~----------- 249 (373)
T 3c1x_A 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD--------------------------------S----------- 249 (373)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC--------------------------------------------------------
T ss_pred EecCccchheEEECCCCCEEEeeccccccccccccc--------------------------------c-----------
Confidence 999999999999999999999999988543111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........+|+.|+|||++.+..++.++|||||||++
T Consensus 250 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il 286 (373)
T 3c1x_A 250 -------------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 286 (373)
T ss_dssp ---------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHH
Confidence 0000113568899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..+.......+...+|+.+||+.||.+|||+.|+++
T Consensus 287 ~ellt~~~~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~ 348 (373)
T 3c1x_A 287 WELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348 (373)
T ss_dssp HHHHTTSCCSCTTSCSS-CHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCcCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 45443322 222233333222222222334559999999999999999999986
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-32 Score=289.80 Aligned_cols=202 Identities=15% Similarity=0.142 Sum_probs=158.9
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..+|.++ +||||+++++ ++.+.. .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 71 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (327)
T 1fvr_A 71 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146 (327)
T ss_dssp HHHHHHHHHTTCCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred HHHHHHHHHHhccCCCchhhhce-eeeeCC---ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHH
Confidence 445778899999 9999999999 555443 68999999 7999999996543 3699999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 147 i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~------------------------------ 196 (327)
T 1fvr_A 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV------------------------------ 196 (327)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC------------------------------
T ss_pred HHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccc------------------------------
Confidence 99999999999999999999999999999999999999998873210000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
......+++.|+|||++.+
T Consensus 197 -------------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 215 (327)
T 1fvr_A 197 -------------------------------------------------------------KKTMGRLPVRWMAIESLNY 215 (327)
T ss_dssp -------------------------------------------------------------CC----CCTTTCCHHHHHH
T ss_pred -------------------------------------------------------------cccCCCCCccccChhhhcc
Confidence 0001246889999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+||.+||..||.+|||+.++++
T Consensus 216 ~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 293 (327)
T 1fvr_A 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293 (327)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-HHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 889999999999999999997 56554433 444555544333333333455569999999999999999999986
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-32 Score=283.20 Aligned_cols=208 Identities=22% Similarity=0.312 Sum_probs=163.3
Q ss_pred chhhhhhcccCCCCCceecccceeecC-------------CCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENE-------------AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~-------------~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~ 128 (720)
..+|..++.+++||||+++++ ++... .....+|++||| .+++|.+++.. ....+++..++.++.
T Consensus 51 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 129 (284)
T 2a19_B 51 AEREVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129 (284)
T ss_dssp GHHHHHHHHHCCCTTBCCEEE-EEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEee-eEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHH
Confidence 447788999999999999999 44321 112347999999 88899999943 334699999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++||+||||||+||+++.++.++|+|||.+.......
T Consensus 130 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 176 (284)
T 2a19_B 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--------------------------------- 176 (284)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS---------------------------------
T ss_pred HHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc---------------------------------
Confidence 99999999999999999999999999999999999998874321110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
......||+.|+|||++.+..+
T Consensus 177 ----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 198 (284)
T 2a19_B 177 ----------------------------------------------------------KRTRSKGTLRYMSPEQISSQDY 198 (284)
T ss_dssp ----------------------------------------------------------CCCCCCSCCTTSCHHHHHCSCC
T ss_pred ----------------------------------------------------------cccccCCcccccChhhhccCCC
Confidence 0011357999999999999889
Q ss_pred CccccchhhhchhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 289 SCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 289 s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+.++|||||||++|||+++..+..........+....+++.+ .+...+||.+||+.||.+|||+.|++++.+.-.
T Consensus 199 ~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 199 GKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp CTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred cchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999555544444445555555444332 234559999999999999999999999876443
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=293.94 Aligned_cols=206 Identities=16% Similarity=0.155 Sum_probs=161.8
Q ss_pred hhchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHH
Q 004989 62 LRKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECL 124 (720)
Q Consensus 62 ~r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~ 124 (720)
.+..+|..++.++ +|||||++++ ++.... .+|+|||| .+++|.+++.... ..+++.+++
T Consensus 119 ~~~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 194 (382)
T 3tt0_A 119 SDLISEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194 (382)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCchhhhhee-eeccCC---ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHH
Confidence 3445788899998 9999999999 555443 46999999 7899999995432 358999999
Q ss_pred HHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhc
Q 004989 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 125 ~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
.|+.||+.||.|||++||+||||||+|||++.++.+||+|||++...+.....
T Consensus 195 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--------------------------- 247 (382)
T 3tt0_A 195 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY--------------------------- 247 (382)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTT---------------------------
T ss_pred HHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccccccccccc---------------------------
Confidence 99999999999999999999999999999999999999999988543221000
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc
Q 004989 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
.......||+.|+|||++.
T Consensus 248 -------------------------------------------------------------~~~~~~~~t~~y~aPE~~~ 266 (382)
T 3tt0_A 248 -------------------------------------------------------------KKTTNGRLPVKWMAPEALF 266 (382)
T ss_dssp -------------------------------------------------------------CCCTTCCCGGGGSCHHHHH
T ss_pred -------------------------------------------------------------ccccCCCCCcceeCHHHhc
Confidence 0001135688999999999
Q ss_pred CCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 285 GAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 285 ~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+..++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 267 ~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 345 (382)
T 3tt0_A 267 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345 (382)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9889999999999999999998 5655433 3444555544433333333445569999999999999999999987
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-32 Score=294.43 Aligned_cols=206 Identities=16% Similarity=0.160 Sum_probs=153.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .+++|.+++.+....+++.+++.++.||+.||.|||++|
T Consensus 92 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 167 (373)
T 2qol_A 92 DFLGEASIMGQFDHPNIIRLEG-VVTKSK---PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167 (373)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEeeCC---ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 554443 57999999 799999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......... ..
T Consensus 168 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~----------- 205 (373)
T 2qol_A 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-------------------------------AY----------- 205 (373)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC--------------------------------------------------------
T ss_pred eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc-------------------------------ce-----------
Confidence 999999999999999999999999987443211000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 206 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il 240 (373)
T 2qol_A 206 ---------------------------------------------TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240 (373)
T ss_dssp -----------------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------eccCCCcCCCccChhhhccCCcCchhcHHHHHHHH
Confidence 00002457889999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+||++.++++
T Consensus 241 ~ellt~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 241 WEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp HHHHTTC-CTTTTCCHH-HHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 99886 66655443 334444433222222222334559999999999999999999985
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-32 Score=288.41 Aligned_cols=211 Identities=14% Similarity=0.130 Sum_probs=152.7
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH--
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH-- 138 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH-- 138 (720)
+..+.+...+..++||||+++++.+.........+|+|||| .+++|.++++.. .+++..++.++.||+.||.|||
T Consensus 47 ~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~ 124 (301)
T 3q4u_A 47 WFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIE 124 (301)
T ss_dssp HHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHh
Confidence 34445555555689999999999555444444568999999 889999999543 4999999999999999999999
Q ss_pred ------HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccc
Q 004989 139 ------SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 139 ------s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 125 ~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~-- 170 (301)
T 3q4u_A 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ--------------------------------L-- 170 (301)
T ss_dssp BCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E--
T ss_pred hhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc--------------------------------c--
Confidence 999999999999999999999999999987432111000 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC------
Q 004989 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------ 286 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------ 286 (720)
........||+.|+|||++.+.
T Consensus 171 ----------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 198 (301)
T 3q4u_A 171 ----------------------------------------------------DVGNNPRVGTKRYMAPEVLDETIQVDCF 198 (301)
T ss_dssp ----------------------------------------------------ECCCCCCCCCGGGCCHHHHTTCCCTTCH
T ss_pred ----------------------------------------------------cccccccccccceeChhhhcCcCCCCcc
Confidence 0000114789999999999877
Q ss_pred CCCccccchhhhchhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccc------cCchHHHHHHH
Q 004989 287 PVSCASDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLL------KFPKEASFCLW 343 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~------~~p~~~~Li~~ 343 (720)
.++.++|||||||++|||+++ |... .........+......+.++. ..+...+|+.+
T Consensus 199 ~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 278 (301)
T 3q4u_A 199 DSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKE 278 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHH
T ss_pred cCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHH
Confidence 456799999999999999974 3221 111222222222222222211 11234599999
Q ss_pred cCCCCCCCCCChHHHHc
Q 004989 344 LLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~ 360 (720)
||+.||.+|||+.++++
T Consensus 279 cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 279 CWYQNPSARLTALRIKK 295 (301)
T ss_dssp HCCSSGGGSCCHHHHHH
T ss_pred HhhcChhhCCCHHHHHH
Confidence 99999999999999986
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-32 Score=282.93 Aligned_cols=203 Identities=21% Similarity=0.194 Sum_probs=157.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.++ ..|++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 59 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 133 (281)
T 3cc6_A 59 KFMSEAVIMKNLDHPHIVKLIG-IIEEE----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 133 (281)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEcCC----CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 55443 35899999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+.........
T Consensus 134 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 169 (281)
T 3cc6_A 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-------------------------------------------- 169 (281)
T ss_dssp CCCCCCSGGGEEEEETTEEEECCCCGGGCC--------------------------------------------------
T ss_pred cccCCCccceEEECCCCcEEeCccCCCccccccccc--------------------------------------------
Confidence 999999999999999999999999987433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 170 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 204 (281)
T 3cc6_A 170 ---------------------------------------------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCM 204 (281)
T ss_dssp ------------------------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCcceeCchhhccCCCCchhccHHHHHHH
Confidence 00013468899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 205 ~~llt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 266 (281)
T 3cc6_A 205 WEILSFGKQPFFWLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 266 (281)
T ss_dssp HHHHTTTCCTTTTSCGG-GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccCChH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 99997 56543332 223333333222222223345569999999999999999999986
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=281.80 Aligned_cols=206 Identities=13% Similarity=0.110 Sum_probs=162.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++..+ .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 56 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 130 (287)
T 1u59_A 56 EMMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130 (287)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EecCC----CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 55433 47999999 888999999666666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...+..... .
T Consensus 131 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 167 (287)
T 1u59_A 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y----------- 167 (287)
T ss_dssp EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE--------------------------------E-----------
T ss_pred EeeCCCchheEEEcCCCCEEECcccceeeeccCcce--------------------------------e-----------
Confidence 999999999999999999999999988543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 168 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 203 (287)
T 1u59_A 168 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 203 (287)
T ss_dssp --------------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred --------------------------------------------eccccccccccccCHHHhccCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++ ||...... ..+..+.....++......+...+||.+||..||.+||++.+++++
T Consensus 204 ~ellt~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 204 WEALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHTTSCCTTTTCCTH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99997 66554443 3444444443333222333455599999999999999999999974
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-32 Score=303.22 Aligned_cols=211 Identities=16% Similarity=0.228 Sum_probs=146.7
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCC------CCHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS------VDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~------l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..+|.++ +|||||++++ ++.+.. .+|+||||.+++|.+++...... .++..++.++.||+.||.||
T Consensus 56 ~~E~~~l~~l~~HpnIv~~~~-~~~~~~---~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 131 (434)
T 2rio_A 56 LMEIKLLTESDDHPNVIRYYC-SETTDR---FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131 (434)
T ss_dssp HHHHHHHHHHTTSTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCcCeEEE-EEecCC---eEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH
Confidence 4677788765 8999999999 554443 68999999777999999554321 13335678999999999999
Q ss_pred HHCCceeccCCCCcEEEccC-------------CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhc
Q 004989 138 HSQGIVVHNVRPSCFVMSSF-------------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~-------------~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
|++||+||||||+|||++.+ +.+||+|||++........
T Consensus 132 H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~---------------------------- 183 (434)
T 2rio_A 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS---------------------------- 183 (434)
T ss_dssp HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------------------
T ss_pred HHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCc----------------------------
Confidence 99999999999999999754 3788888887743321100
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc
Q 004989 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
.+ ........||+.|+|||++.
T Consensus 184 ----~~------------------------------------------------------~~~~~~~~gt~~y~aPE~~~ 205 (434)
T 2rio_A 184 ----SF------------------------------------------------------RTNLNNPSGTSGWRAPELLE 205 (434)
T ss_dssp ---------------------------------------------------------------------CCTTSCHHHHS
T ss_pred ----cc------------------------------------------------------eeeecCCCCCCCccCHHHhc
Confidence 00 00001147899999999997
Q ss_pred C-------CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCcccc----cc-CchHHHHHHHcCCCC
Q 004989 285 G-------APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLL----LK-FPKEASFCLWLLHPE 348 (720)
Q Consensus 285 ~-------~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~----~~-~p~~~~Li~~~L~~d 348 (720)
+ ..++.++|||||||++|||++ ||....... ...+......+... .. .+...+||.+||+.|
T Consensus 206 ~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 283 (434)
T 2rio_A 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 283 (434)
T ss_dssp CCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSS
T ss_pred cccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCC
Confidence 6 458999999999999999998 554433222 11122111111111 11 134459999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004989 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.++++||||...
T Consensus 284 P~~Rps~~eil~hp~f~~~ 302 (434)
T 2rio_A 284 PLKRPTAMKVLRHPLFWPK 302 (434)
T ss_dssp GGGSCCHHHHHTSGGGSCH
T ss_pred hhhCCCHHHHHhCCccCCc
Confidence 9999999999999999764
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=284.81 Aligned_cols=205 Identities=16% Similarity=0.181 Sum_probs=159.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------------CCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------------------~~l 118 (720)
+..+|..+|.+++||||+++++ ++.... .+++|||| .+++|.+++.... ..+
T Consensus 72 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (314)
T 2ivs_A 72 DLLSEFNVLKQVNHPHVIKLYG-ACSQDG---PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147 (314)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEE
T ss_pred HHHHHHHHHhhCCCCceeeEEE-EEecCC---ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCc
Confidence 4447888999999999999999 554443 47999999 8899999995432 238
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 148 ~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~---------------------- 205 (314)
T 2ivs_A 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS---------------------- 205 (314)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSC----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEcccccccccccccc----------------------
Confidence 9999999999999999999999999999999999999999999999998743321100
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
+ .......+|+.|+
T Consensus 206 -----------~-------------------------------------------------------~~~~~~~~~~~y~ 219 (314)
T 2ivs_A 206 -----------Y-------------------------------------------------------VKRSQGRIPVKWM 219 (314)
T ss_dssp -----------E-------------------------------------------------------ECSSCCCSCGGGC
T ss_pred -----------c-------------------------------------------------------eeccCCCCccccc
Confidence 0 0000135688999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||
T Consensus 220 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 298 (314)
T 2ivs_A 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298 (314)
T ss_dssp CHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 9999998889999999999999999998 56544332 333444444333332233345569999999999999999
Q ss_pred hHHHHc
Q 004989 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 299 ~~~l~~ 304 (314)
T 2ivs_A 299 FADISK 304 (314)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=285.16 Aligned_cols=199 Identities=18% Similarity=0.242 Sum_probs=152.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++.+ ..|+|||| .|++|.+++..... .+++..++.++.||+.||.|||+
T Consensus 47 ~~~~E~~~l~~l~hp~iv~~~~-~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 120 (307)
T 2eva_A 47 AFIVELRQLSRVNHPNIVKLYG-ACLN-----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120 (307)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-BCTT-----TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCcCeEEE-EEcC-----CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHh
Confidence 3447788999999999999999 4432 35899999 89999999965432 47899999999999999999999
Q ss_pred ---CCceeccCCCCcEEEccCCc-eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 140 ---QGIVVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 140 ---~gIvHrDLKP~NILl~~~~~-vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
+||+||||||+|||++.++. +||+|||.+......
T Consensus 121 ~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----------------------------------------- 159 (307)
T 2eva_A 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----------------------------------------- 159 (307)
T ss_dssp CSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------------------------------------------
T ss_pred CCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-----------------------------------------
Confidence 89999999999999998886 799988887322100
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.....||+.|+|||++.+..++.++|||
T Consensus 160 ----------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 187 (307)
T 2eva_A 160 ----------------------------------------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVF 187 (307)
T ss_dssp ---------------------------------------------------------CCTTSSCHHHHTCCCCCTHHHHH
T ss_pred ----------------------------------------------------cccCCCCCceEChhhhCCCCCCcHHHHH
Confidence 0013579999999999998899999999
Q ss_pred hhhchhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||.... .....+..+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 188 slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 188 SWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp HHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999999 665432 222333334444344333333344559999999999999999999986
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-32 Score=289.39 Aligned_cols=205 Identities=15% Similarity=0.130 Sum_probs=159.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------------CCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------------------~~l 118 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++.... ..+
T Consensus 96 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (343)
T 1luf_A 96 DFQREAALMAEFDNPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171 (343)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEccCC---ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCC
Confidence 4457888999999999999999 555443 57999999 8899999995421 458
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 172 ~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------------ 227 (343)
T 1luf_A 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA------------------------ 227 (343)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccC------------------------
Confidence 99999999999999999999999999999999999999999999999987322110
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
+. ........||+.|+
T Consensus 228 ----------~~------------------------------------------------------~~~~~~~~~t~~y~ 243 (343)
T 1luf_A 228 ----------DY------------------------------------------------------YKADGNDAIPIRWM 243 (343)
T ss_dssp ----------GC------------------------------------------------------BC----CCBCGGGC
T ss_pred ----------cc------------------------------------------------------ccccCCCcccceec
Confidence 00 00001135789999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||
T Consensus 244 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 322 (343)
T 1luf_A 244 PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-EVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPS 322 (343)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 9999998889999999999999999997 66554433 344444444433322223344569999999999999999
Q ss_pred hHHHHc
Q 004989 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 323 ~~~~~~ 328 (343)
T 1luf_A 323 FCSIHR 328 (343)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-32 Score=284.96 Aligned_cols=206 Identities=15% Similarity=0.175 Sum_probs=159.5
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC-----------------CCCHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-----------------SVDVYEC 123 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~-----------------~l~~~~~ 123 (720)
+..+|..+|.++ +||||+++++ ++.... .+++|||| .+++|.+++..... .+++.++
T Consensus 72 ~~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (313)
T 1t46_A 72 ALMSELKVLSYLGNHMNIVNLLG-ACTIGG---PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147 (313)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred HHHHHHHHHhhcccCCCeeeEEE-EEecCC---CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHH
Confidence 344788899999 9999999999 555543 46999999 78899999954332 4899999
Q ss_pred HHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhh
Q 004989 124 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 203 (720)
Q Consensus 124 ~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (720)
+.++.||+.||.|||++||+||||||+||+++.++.+||+|||.+...+....
T Consensus 148 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------- 200 (313)
T 1t46_A 148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--------------------------- 200 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT---------------------------
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccccc---------------------------
Confidence 99999999999999999999999999999999999999999998854322100
Q ss_pred cccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc
Q 004989 204 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 283 (720)
Q Consensus 204 ~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 283 (720)
+ .......||+.|+|||++
T Consensus 201 ------~-------------------------------------------------------~~~~~~~~~~~y~aPE~~ 219 (313)
T 1t46_A 201 ------Y-------------------------------------------------------VVKGNARLPVKWMAPESI 219 (313)
T ss_dssp ------S-------------------------------------------------------EECSSSEECGGGCCHHHH
T ss_pred ------c-------------------------------------------------------eeccCCCCcceeeChHHh
Confidence 0 000013568899999999
Q ss_pred cCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHH
Q 004989 284 AGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 284 ~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
.+..++.++|||||||++|||++ ||............+.....+.......+...+|+.+||++||.+|||+.|++
T Consensus 220 ~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 299 (313)
T 1t46_A 220 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299 (313)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 88889999999999999999997 66554433334444443332222222334456999999999999999999998
Q ss_pred c
Q 004989 360 Q 360 (720)
Q Consensus 360 ~ 360 (720)
+
T Consensus 300 ~ 300 (313)
T 1t46_A 300 Q 300 (313)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-32 Score=288.41 Aligned_cols=207 Identities=16% Similarity=0.144 Sum_probs=140.8
Q ss_pred hhhh-hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 66 SDGV-ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~-~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+|.. ++..++||||+++++ ++.... .+++||||..++|.+++.. ....+++..+..++.||+.||.|||++
T Consensus 69 ~e~~~~~~~~~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 144 (327)
T 3aln_A 69 MDLDVVMRSSDCPYIVQFYG-ALFREG---DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144 (327)
T ss_dssp HHHHHHHSSCCCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcEeeeee-EEEeCC---ceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc
Confidence 4443 778899999999999 454443 5799999966799988842 345599999999999999999999999
Q ss_pred -CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 -GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 -gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+||||||+|||++.++.+||+|||++.......
T Consensus 145 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------- 180 (327)
T 3aln_A 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI-------------------------------------------- 180 (327)
T ss_dssp HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------------------------------------------------
T ss_pred CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc--------------------------------------------
Confidence 99999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc----cCCCCCccccch
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIY 295 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----~~~~~s~~sDIw 295 (720)
......||+.|+|||++ .+..++.++|||
T Consensus 181 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~ 213 (327)
T 3aln_A 181 -----------------------------------------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVW 213 (327)
T ss_dssp ------------------------------------------------------------------------CCSHHHHH
T ss_pred -----------------------------------------------ccccCCCCccccCceeeccccCcCCCCchhhHH
Confidence 00013679999999999 455589999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCCCCc---cccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||.........+..+.....+. .... ..+...+|+.+||+.||.+|||+.++++||||...
T Consensus 214 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 214 SLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp HHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 99999999999 6665433322222222222211 1112 23445699999999999999999999999999764
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=288.01 Aligned_cols=210 Identities=15% Similarity=0.130 Sum_probs=161.4
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.++ +||||+++++ ++.... ..|+||||.+++|.+++......+++.+++.|+.||+.||.|||++||
T Consensus 51 ~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 126 (330)
T 2izr_A 51 LHLEYRFYKQLGSGDGIPQVYY-FGPCGK---YNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126 (330)
T ss_dssp HHHHHHHHHHHCSCTTSCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHhhCCCCCCEEEE-EEecCC---ccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 34677788888 9999999999 555443 679999999999999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc-----eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 143 VVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++.++. +||+|||++........... .
T Consensus 127 iHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~------------------------------~------- 169 (330)
T 2izr_A 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH------------------------------I------- 169 (330)
T ss_dssp ECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB------------------------------C-------
T ss_pred eccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc------------------------------c-------
Confidence 99999999999998887 99999998854322100000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.........||+.|+|||++.+..++.++|||||
T Consensus 170 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 203 (330)
T 2izr_A 170 ----------------------------------------------PYREHKSLTGTARYMSINTHLGKEQSRRDDLEAL 203 (330)
T ss_dssp ----------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred ----------------------------------------------cccccCCcCCCccccChHHHcCCCCCchhHHHHH
Confidence 0000112578999999999999999999999999
Q ss_pred hchhhhccc---cCCCC--chHHHHHHHhhc---CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 298 GVLLFELFC---PFSTG--EEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt---pf~~~--~~~~~~~~~l~~---~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||... ......+..+.. ...+..+...+|...+|+.+||..||.+||++.+|++
T Consensus 204 G~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 204 GHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 999999999 77653 222233333322 1222233445677779999999999999999999875
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=300.49 Aligned_cols=200 Identities=16% Similarity=0.132 Sum_probs=156.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++|||||++++++..... .+|+|||| .+++|.++|...+ ..+++..++.++.||+.||.|||++|
T Consensus 233 ~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 309 (450)
T 1k9a_A 233 FLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309 (450)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECTTS---CEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCCEEEEEEEEEcCCC---ceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3478889999999999999994443332 57999999 8899999995443 34799999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++.....
T Consensus 310 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------------------------------------- 342 (450)
T 1k9a_A 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----------------------------------------------- 342 (450)
T ss_dssp EECSCCCGGGEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred eeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----------------------------------------------
Confidence 999999999999999999999999887421100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+++.|+|||++.+..++.++|||||||++
T Consensus 343 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l 376 (450)
T 1k9a_A 343 ----------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376 (450)
T ss_dssp --------------------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 0002457889999999998899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.++++
T Consensus 377 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 377 WEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHHHTTTCCSSTTSCTT-THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99997 66654333 233344444333222223344559999999999999999999985
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-32 Score=286.14 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=161.0
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC---------------CCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR---------------SVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~---------------~l~~~~~~~ 125 (720)
+..+|..+|.++ +||||+++++ ++.... ..++++||| .+++|.+++..... .+++..++.
T Consensus 76 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (316)
T 2xir_A 76 ALMSELKILIHIGHHLNVVNLLG-ACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152 (316)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECCTT--SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHH
T ss_pred HHHHHHHHHHhcccCCCeeeEEE-EEecCC--CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHH
Confidence 445788889888 7999999999 443332 247999999 88999999965432 289999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 153 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------------------------------ 202 (316)
T 2xir_A 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------------------------------ 202 (316)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT------------------------------
T ss_pred HHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCc------------------------------
Confidence 99999999999999999999999999999999999999999885432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.. .......||+.|+|||++.+
T Consensus 203 ---~~-------------------------------------------------------~~~~~~~~t~~y~aPE~~~~ 224 (316)
T 2xir_A 203 ---DY-------------------------------------------------------VRKGDARLPLKWMAPETIFD 224 (316)
T ss_dssp ---TS-------------------------------------------------------EEETTEEECGGGCCHHHHHH
T ss_pred ---cc-------------------------------------------------------eeccCCCcceeecCchhhcc
Confidence 00 00011357899999999998
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||+.|+++|
T Consensus 225 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 889999999999999999997 6665543334444444443333222334556699999999999999999999974
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=283.07 Aligned_cols=203 Identities=16% Similarity=0.214 Sum_probs=151.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++..+. .+|++||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 80 ~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 154 (309)
T 2h34_A 80 RMQREARTAGRLQEPHVVPIHD-FGEIDG---QLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAG 154 (309)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcCCCCeeEEEE-EEeeCC---eEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 3447888999999999999999 554443 67999999 7889999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+.........
T Consensus 155 i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 190 (309)
T 2h34_A 155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT-------------------------------------------- 190 (309)
T ss_dssp CCCSCCCGGGEEECTTSCEEECSCCC------------------------------------------------------
T ss_pred CCcCCCChHHEEEcCCCCEEEecCccCccccccccc--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 191 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 225 (309)
T 2h34_A 191 ---------------------------------------------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVL 225 (309)
T ss_dssp ---------------------------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHH
Confidence 00113689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCC-ChHHHHc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRP-KMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~-~~~Li~~~L~~dP~~Rp-ta~eiL~ 360 (720)
|||++ ||...... .....+.....+ ......+|. ..+||.+||+.||.+|| +++++++
T Consensus 226 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 226 YECLTGSPPYQGDQLS-VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHHSSCSSCSCHHH-HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHHCCCCCCCchHH-HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 99999 66655433 333333333222 233344444 45999999999999999 7888775
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=284.45 Aligned_cols=206 Identities=13% Similarity=0.146 Sum_probs=158.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 92 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 167 (333)
T 1mqb_A 92 DFLGEAGIMGQFSHHNIIRLEG-VISKYK---PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167 (333)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEecCC---CcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 554433 67999999 788999999766566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... .+
T Consensus 168 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~----------- 205 (333)
T 1mqb_A 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------TY----------- 205 (333)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCCCC------------------------------------------------------
T ss_pred eeCCCCChheEEECCCCcEEECCCCcchhhcccccc-------------------------------cc-----------
Confidence 999999999999999999999999988443211000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 206 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 240 (333)
T 1mqb_A 206 ---------------------------------------------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM 240 (333)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCCCCccccccCchhcccCCCCchhhhHHHHHHH
Confidence 00012468899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ..+..+.....++......+...+|+.+||+.||.+||++.++++
T Consensus 241 ~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 302 (333)
T 1mqb_A 241 WEVMTYGERPYWELSNH-EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 302 (333)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99987 66554433 344445444333332233344569999999999999999999986
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=281.98 Aligned_cols=208 Identities=14% Similarity=0.119 Sum_probs=154.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++..++||||+++++ ++.... ..++|||| .+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 73 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 148 (326)
T 3uim_A 73 QFQTEVEMISMAVHRNLLRLRG-FCMTPT---ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148 (326)
T ss_dssp HHHHHHHGGGTCCCTTBCCCCE-EECCSS---CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCccceEE-EEecCC---ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4457778999999999999999 555443 45899999 899999999543 334899999999999999999999
Q ss_pred HC---CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 139 SQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~---gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++ ||+||||||+|||++.++.+||+|||++...+.....
T Consensus 149 ~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------- 190 (326)
T 3uim_A 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-------------------------------------- 190 (326)
T ss_dssp HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSC--------------------------------------
T ss_pred hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccccc--------------------------------------
Confidence 99 9999999999999999999999999987432111000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
......||+.|+|||++.+..++.++|||
T Consensus 191 ---------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 219 (326)
T 3uim_A 191 ---------------------------------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVF 219 (326)
T ss_dssp ---------------------------------------------------EECCCCSCGGGCCHHHHHHSEECHHHHHH
T ss_pred ---------------------------------------------------ccccccCCcCccCHHHhccCCCCccccch
Confidence 00113589999999999888899999999
Q ss_pred hhhchhhhccc---cCCCC-------chHHHHHHHh-hcCC----CCcccccc-----CchHHHHHHHcCCCCCCCCCCh
Q 004989 296 RLGVLLFELFC---PFSTG-------EEKTRTMSSL-RHRV----LPPQLLLK-----FPKEASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~-------~~~~~~~~~l-~~~~----~p~~~~~~-----~p~~~~Li~~~L~~dP~~Rpta 355 (720)
||||++|||++ ||... .......... .... ....+... .+...+|+.+||+.||.+|||+
T Consensus 220 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 299 (326)
T 3uim_A 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299 (326)
T ss_dssp HHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCH
T ss_pred hHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCH
Confidence 99999999999 55310 0000111111 1110 11111111 1234599999999999999999
Q ss_pred HHHHcCcc
Q 004989 356 GELLQSEF 363 (720)
Q Consensus 356 ~eiL~hp~ 363 (720)
.|+++|-.
T Consensus 300 ~ell~~L~ 307 (326)
T 3uim_A 300 SEVVRMLE 307 (326)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998654
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=275.96 Aligned_cols=203 Identities=15% Similarity=0.172 Sum_probs=159.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 50 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 125 (267)
T 3t9t_A 50 FIEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 125 (267)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEccCC---CeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 346778999999999999999 554443 57999999 7899999997665669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... .
T Consensus 126 ~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~------------ 159 (267)
T 3t9t_A 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----------------------------------Y------------ 159 (267)
T ss_dssp CCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH----------------------------------H------------
T ss_pred ccCCCchheEEECCCCCEEEccccccccccccc----------------------------------c------------
Confidence 999999999999999999999998874321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 196 (267)
T 3t9t_A 160 ------------------------T-------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 196 (267)
T ss_dssp ------------------------H-------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------c-------------------ccccccccccccChhhhcCCCccchhchhhhHHHHH
Confidence 0 000135688999999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++
T Consensus 197 ~l~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 257 (267)
T 3t9t_A 197 EVFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257 (267)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhccCCCCCCCCCHH-HHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9998 55554333 344444444322222223345569999999999999999999986
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-32 Score=288.11 Aligned_cols=207 Identities=17% Similarity=0.235 Sum_probs=154.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---RSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|..++||||+++++ ++.... .+++|||| .+++|.+++.... ..+++..++.++.||+.||.|||
T Consensus 81 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 156 (321)
T 2qkw_B 81 EFETEIETLSFCRHPHLVSLIG-FCDERN---EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156 (321)
T ss_dssp HHHHHHHGGGSCCCTTBCCEEE-ECCCTT---CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEcCCC---eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc
Confidence 4457888999999999999999 554443 56999999 8899999994432 34899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+||+++.++.+||+|||++.........
T Consensus 157 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 195 (321)
T 2qkw_B 157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT----------------------------------------- 195 (321)
T ss_dssp HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC-----------------------------------------
T ss_pred CCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc-----------------------------------------
Confidence 999999999999999999999999999987432111000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++.+..++.++||||||
T Consensus 196 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 228 (321)
T 2qkw_B 196 -----------------------------------------------HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228 (321)
T ss_dssp -----------------------------------------------CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCccccCHHHhcCCCCCcccchHhHH
Confidence 000113689999999999888899999999999
Q ss_pred chhhhccc---cCCCCchH------HHHHHHhhcC----CCCccccccC-----chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGEEK------TRTMSSLRHR----VLPPQLLLKF-----PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~------~~~~~~l~~~----~~p~~~~~~~-----p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||...... .......... ...+.+.... +...+|+.+||+.||++|||+.|+++
T Consensus 229 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 308 (321)
T 2qkw_B 229 VVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW 308 (321)
T ss_dssp HHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999999 55432111 0001111111 1112211111 23349999999999999999999996
Q ss_pred C
Q 004989 361 S 361 (720)
Q Consensus 361 h 361 (720)
+
T Consensus 309 ~ 309 (321)
T 2qkw_B 309 K 309 (321)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-32 Score=291.65 Aligned_cols=211 Identities=13% Similarity=0.096 Sum_probs=156.5
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|..++..++||||+++++.+.........+|+||||.|++|.+++...+ .+++.+++.|+.||+.||.|||++||+||
T Consensus 97 ~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 175 (345)
T 2v62_A 97 KKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHG 175 (345)
T ss_dssp HHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHhhccccccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 66778889999999999995544333344789999999899999995544 59999999999999999999999999999
Q ss_pred cCCCCcEEEccCC--ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 146 NVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 146 DLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|||++.++ .+||+|||+++........ ..+
T Consensus 176 Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~------------------------------~~~------------- 212 (345)
T 2v62_A 176 DIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNH------------------------------KQY------------- 212 (345)
T ss_dssp CCSGGGEEEESSSTTSEEECCCTTCEESSGGGCC------------------------------CCC-------------
T ss_pred CcCHHHEEEccCCCCcEEEEeCCCceeccccccc------------------------------ccc-------------
Confidence 9999999999877 9999999988543211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 213 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 252 (345)
T 2v62_A 213 ----------------------------------------QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLR 252 (345)
T ss_dssp ----------------------------------------CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence 0000012478999999999999989999999999999999
Q ss_pred ccc---cCCCCchHHHHH---HHhhcCCCCccccc-----cCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC---PFSTGEEKTRTM---SSLRHRVLPPQLLL-----KFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~---~~l~~~~~p~~~~~-----~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||.......... .......+++.+.. ..| ...+|+.+||..||.+||++.+|++
T Consensus 253 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 253 WLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 999 664321111111 11111223332211 233 4559999999999999999999986
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=287.28 Aligned_cols=209 Identities=17% Similarity=0.128 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.++ .. ....+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 70 ~~~~E~~~l~~l~h~~i~~~~~~~~-~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 147 (327)
T 3lxl_A 70 DFQREIQILKALHSDFIVKYRGVSY-GP-GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147 (327)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEE-CS-SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCceeEEEEEEe-cC-CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3457888999999999999999433 22 22368999999 799999999654445999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+...+.... ..
T Consensus 148 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~~---------- 184 (327)
T 3lxl_A 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD---------------------------------YY---------- 184 (327)
T ss_dssp EECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS---------------------------------EE----------
T ss_pred ccCCCCChhhEEECCCCCEEEcccccceecccCCc---------------------------------cc----------
Confidence 99999999999999999999999998854322100 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 185 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 220 (327)
T 3lxl_A 185 --------------------------------------------VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 220 (327)
T ss_dssp --------------------------------------------ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------eeeccCCccccccCHHHhccCCCChHHhHHHHHHHH
Confidence 000113578999999999988899999999999999
Q ss_pred hhccc---cCCCCch--------------HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEE--------------KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~--------------~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||..... .......+.....++......+...+|+.+||++||.+|||+.|+++
T Consensus 221 ~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 296 (327)
T 3lxl_A 221 YELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP 296 (327)
T ss_dssp HHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999 4432211 11222233333333332233344559999999999999999999975
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=281.74 Aligned_cols=208 Identities=14% Similarity=0.125 Sum_probs=156.2
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..+ +||||+++++ ++.... ..++||||.+++|.+++...+..+++.+++.++.||+.||.|||++||+|
T Consensus 54 ~e~~~~~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 129 (298)
T 1csn_A 54 DEYRTYKLLAGCTGIPNVYY-FGQEGL---HNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 129 (298)
T ss_dssp HHHHHHHHTTTCTTCCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHHHhcCCCCCeEEe-ecCCCc---eeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 556677777 7999999999 554443 67999999999999999766666999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCc-----eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 145 HNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 145 rDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||+|||++.++. +||+|||++........... .
T Consensus 130 ~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~--------- 170 (298)
T 1csn_A 130 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH------------------------------I--------- 170 (298)
T ss_dssp CCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB------------------------------C---------
T ss_pred CCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccc------------------------------c---------
Confidence 999999999987766 99999998854322110000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.........||+.|+|||++.+..++.++|||||||
T Consensus 171 --------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 206 (298)
T 1csn_A 171 --------------------------------------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH 206 (298)
T ss_dssp --------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred --------------------------------------------cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHH
Confidence 000011247899999999999988999999999999
Q ss_pred hhhhccc---cCCCCc--hHHHHHHHhhcC---CCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 300 LLFELFC---PFSTGE--EKTRTMSSLRHR---VLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~--~~~~~~~~l~~~---~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||++ ||.... .....+..+... ...+.+...+| ...+|+.+||..||.+||++.+|++
T Consensus 207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 207 VFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp HHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 9999999 676532 122222222221 12222233444 4459999999999999999999985
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=283.83 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=159.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CCCCCHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVE 132 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~~~l~~~~~~~i~~QIl~ 132 (720)
+..+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++... ...+++..++.++.||+.
T Consensus 74 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 149 (322)
T 1p4o_A 74 EFLNEASVMKEFNCHHVVRLLG-VVSQGQ---PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149 (322)
T ss_dssp HHHHHHHHGGGCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEeeeEE-EEccCC---ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHH
Confidence 4457888999999999999999 554443 56999999 789999999432 134799999999999999
Q ss_pred HHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccc
Q 004989 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||.|||++||+||||||+||+++.++.+||+|||++...... +.
T Consensus 150 ~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~----------------------------------~~-- 193 (322)
T 1p4o_A 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET----------------------------------DY-- 193 (322)
T ss_dssp HHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGG----------------------------------GC--
T ss_pred HHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccc----------------------------------cc--
Confidence 999999999999999999999999999999999987322100 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccc
Q 004989 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
........||+.|+|||++.+..++.++
T Consensus 194 ----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 221 (322)
T 1p4o_A 194 ----------------------------------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYS 221 (322)
T ss_dssp ----------------------------------------------------EEGGGSSEECGGGCCHHHHHHCCCCHHH
T ss_pred ----------------------------------------------------cccccCCCCCCCccChhhhccCCCCchh
Confidence 0000113578999999999988899999
Q ss_pred cchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||||++|||++ ||...... .....+.....++......+...+||.+||+.||.+|||+.|++++
T Consensus 222 Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 222 DVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHHHHHHHHHHHHHTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCccccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999999998 55544333 3444444444333333333445699999999999999999999974
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=286.12 Aligned_cols=210 Identities=13% Similarity=0.146 Sum_probs=151.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
..+.+...+..++||||+++++.+.........+|+|||| .+++|.+++... .+++..++.++.||+.||.|||++
T Consensus 77 ~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~ 154 (337)
T 3mdy_A 77 FRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEI 154 (337)
T ss_dssp HHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCB
T ss_pred hhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3345555555579999999999444443333578999999 789999999554 399999999999999999999998
Q ss_pred -------CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 141 -------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 141 -------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
||+||||||+|||++.++.+||+|||++......... .
T Consensus 155 ~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~--- 199 (337)
T 3mdy_A 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE--------------------------------V--- 199 (337)
T ss_dssp CSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC-----------------------------------------
T ss_pred hhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc--------------------------------c---
Confidence 9999999999999999999999999988443221000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcc--
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA-- 291 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~-- 291 (720)
........||+.|+|||++.+..++..
T Consensus 200 ---------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 228 (337)
T 3mdy_A 200 ---------------------------------------------------DIPPNTRVGTKRYMPPEVLDESLNRNHFQ 228 (337)
T ss_dssp ------------------------------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTH
T ss_pred ---------------------------------------------------cCCCCCCccCcceeChhhcccccCCcccc
Confidence 000011478999999999988776555
Q ss_pred ----ccchhhhchhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccc-----cC-chHHHHHHHc
Q 004989 292 ----SDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLL-----KF-PKEASFCLWL 344 (720)
Q Consensus 292 ----sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~-----~~-p~~~~Li~~~ 344 (720)
+|||||||++|||+++ |... .........+......+.+.. .. +...+|+.+|
T Consensus 229 ~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 308 (337)
T 3mdy_A 229 SYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTEC 308 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHH
T ss_pred CccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHh
Confidence 9999999999999973 2211 111222222222222222222 12 2345999999
Q ss_pred CCCCCCCCCChHHHHc
Q 004989 345 LHPEPSGRPKMGELLQ 360 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~ 360 (720)
|+.||.+|||+.++++
T Consensus 309 l~~dP~~Rps~~ell~ 324 (337)
T 3mdy_A 309 WAHNPASRLTALRVKK 324 (337)
T ss_dssp SCSSGGGSCCHHHHHH
T ss_pred hhhChhhCCCHHHHHH
Confidence 9999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-31 Score=279.43 Aligned_cols=208 Identities=17% Similarity=0.178 Sum_probs=157.0
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..++.+++||||+++++ ++.... .++++||| .|++|.+++......+++..++.++.||+.||.|||++
T Consensus 74 ~~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 149 (319)
T 2y4i_B 74 KAFKREVMAYRQTRHENVVLFMG-ACMSPP---HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149 (319)
T ss_dssp CCCCTTGGGGTTCCCTTBCCCCE-EEECSS---CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCEeEEEE-EEecCC---ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34457888999999999999999 554443 57999999 78999999976666799999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++ ++.++|+|||++...+..... .
T Consensus 150 ~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~--------------------------------~---------- 186 (319)
T 2y4i_B 150 GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG--------------------------------R---------- 186 (319)
T ss_dssp TCCCCCCCSTTEEEC---CCEECCCSCCC---------------------------------------------------
T ss_pred CccccCCChhhEEEe-CCCEEEeecCCcccccccccc--------------------------------c----------
Confidence 999999999999997 789999999987433211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---------CCCCcc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---------APVSCA 291 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---------~~~s~~ 291 (720)
.........||+.|+|||++.+ ..++.+
T Consensus 187 -------------------------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~ 223 (319)
T 2y4i_B 187 -------------------------------------------REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH 223 (319)
T ss_dssp --------------------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHH
T ss_pred -------------------------------------------cccccccCCCcccccChHHhhhccccccccccCCCch
Confidence 0000011368999999999975 347899
Q ss_pred ccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||...... .....+.....+......+ +...+|+.+||..||.+|||+.++++
T Consensus 224 ~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 224 SDVFALGTIWYELHAREWPFKTQPAE-AIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSSCCHH-HHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999999999999 67655443 3334444444433333233 45569999999999999999999986
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=281.03 Aligned_cols=205 Identities=15% Similarity=0.082 Sum_probs=157.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++... .++++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 67 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 141 (291)
T 1u46_A 67 DFIREVNAMHSLDHRNLIRLYG-VVLTP----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141 (291)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEccC----CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 55443 26899999 889999999655455999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 142 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 178 (291)
T 1u46_A 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--------------------------------Y----------- 178 (291)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE--------------------------------E-----------
T ss_pred cccCCCchheEEEcCCCCEEEccccccccccccccc--------------------------------h-----------
Confidence 999999999999999999999999987443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......+|+.|+|||++.+..++.++|||||||++
T Consensus 179 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (291)
T 1u46_A 179 --------------------------------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214 (291)
T ss_dssp --------------------------------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+............+ +...+|+.+||..||.+|||+.++++
T Consensus 215 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 215 WEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccCCHH-HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99997 56555444 3333343332222223334 44559999999999999999999986
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=277.53 Aligned_cols=204 Identities=18% Similarity=0.167 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++.+++||||+++++ ++.+.. .+|+|||| .|++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 55 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 130 (288)
T 3kfa_A 55 EFLKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130 (288)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEccCC---CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC
Confidence 3347788999999999999999 554443 57999999 88999999954 445599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+.........
T Consensus 131 ~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~------------------------------------------- 167 (288)
T 3kfa_A 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT------------------------------------------- 167 (288)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE-------------------------------------------
T ss_pred CccCCCCCcceEEEcCCCCEEEccCccceeccCCccc-------------------------------------------
Confidence 9999999999999999999999999988443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......+|+.|+|||++.+..++.++|||||||+
T Consensus 168 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 201 (288)
T 3kfa_A 168 ----------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201 (288)
T ss_dssp ----------------------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCccccCcCChhhhccCCCCchhhHHHHHHH
Confidence 0001356889999999998889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+|++ ||...... .....+.....++......+...+|+.+||.+||.+|||+.++++
T Consensus 202 l~~ll~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 202 LWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp HHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 999998 55443332 233333333222222223344559999999999999999999985
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=279.86 Aligned_cols=209 Identities=13% Similarity=0.071 Sum_probs=155.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHh-----CCCCCCCHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLD-----KPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~-----~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..++.+++||||+++++.+..... .....+++||| .+++|.+++. .....+++..++.++.||+.||.
T Consensus 82 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 161 (313)
T 3brb_A 82 EFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161 (313)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHH
Confidence 44478889999999999999994433222 22357999999 8899999983 23355999999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+||+++.++.+||+|||++.........
T Consensus 162 ~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------- 203 (313)
T 3brb_A 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY-------------------------------------- 203 (313)
T ss_dssp HHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-----------------------------------------------
T ss_pred HHHhCCcccCCCCcceEEEcCCCcEEEeecCcceeccccccc--------------------------------------
Confidence 999999999999999999999999999999987432111000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.......+++.|+|||.+.+..++.++|||
T Consensus 204 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 233 (313)
T 3brb_A 204 --------------------------------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVW 233 (313)
T ss_dssp ---------------------------------------------------------CCGGGSCHHHHHSSCCCHHHHHH
T ss_pred --------------------------------------------------CcccccCCCccccCchhhcCCCccchhhhH
Confidence 000113568899999999998899999999
Q ss_pred hhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|+|++ ||...... .....+.....++......+...+|+.+||..||.+|||+.++++
T Consensus 234 slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 234 AFGVTMWEIATRGMTPYPGVQNH-EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCccCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999998 55544333 333344444333333333345569999999999999999999986
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=277.82 Aligned_cols=204 Identities=13% Similarity=0.115 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++..+ .+++|||| .+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 64 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ 137 (291)
T 1xbb_A 64 ELLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESN 137 (291)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EECCC----CcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 55332 57999999 8899999996543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+......... .
T Consensus 138 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 174 (291)
T 1xbb_A 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--------------------------------Y----------- 174 (291)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE--------------------------------E-----------
T ss_pred eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc--------------------------------c-----------
Confidence 999999999999999999999999987443221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......+|+.|+|||++.+..++.++|||||||++
T Consensus 175 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 210 (291)
T 1xbb_A 175 ------------------------K--------------------AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 210 (291)
T ss_dssp ------------------------E--------------------C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c--------------------ccccCCCCceeeChHHhccCCCChhhhHHHHHHHH
Confidence 0 00012467899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....++......+...+||.+||+.||.+||++.++++
T Consensus 211 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 211 WEAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99997 66554443 344444444333322223344569999999999999999999985
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=287.17 Aligned_cols=206 Identities=16% Similarity=0.184 Sum_probs=158.2
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-------------CCCCCHHHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-------------KRSVDVYECLHIF 127 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-------------~~~l~~~~~~~i~ 127 (720)
+..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++... ...+++..++.++
T Consensus 95 ~~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (333)
T 2i1m_A 95 ALMSELKIMSHLGQHENIVNLLG-ACTHGG---PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170 (333)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCeeeEEE-EEecCC---ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHH
Confidence 444788899999 8999999999 555443 57999999 788999999432 3358999999999
Q ss_pred HHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccc
Q 004989 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 171 ~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-------------------------------- 218 (333)
T 2i1m_A 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS-------------------------------- 218 (333)
T ss_dssp HHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCT--------------------------------
T ss_pred HHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECcccccccccccc--------------------------------
Confidence 999999999999999999999999999999999999998874321110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC
Q 004989 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
.. .......||+.|+|||++.+..
T Consensus 219 -~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~ 242 (333)
T 2i1m_A 219 -NY-------------------------------------------------------IVKGNARLPVKWMAPESIFDCV 242 (333)
T ss_dssp -TS-------------------------------------------------------EECSSCEECGGGSCHHHHHHCC
T ss_pred -ce-------------------------------------------------------eecCCCCCCccccCHHHhccCC
Confidence 00 0001135688999999999888
Q ss_pred CCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 243 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 9999999999999999997 666554433333334333322222222344569999999999999999999986
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=280.08 Aligned_cols=201 Identities=16% Similarity=0.126 Sum_probs=152.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++.+++||||+++++.++.... .+|++||| .+++|.+++.... ..+++..++.++.||+.||.|||++
T Consensus 60 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 136 (278)
T 1byg_A 60 AFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136 (278)
T ss_dssp HHHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEcCCC---ceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34477889999999999999994343332 46999999 7889999995432 2379999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+...+..
T Consensus 137 ~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---------------------------------------------- 170 (278)
T 1byg_A 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---------------------------------------------- 170 (278)
T ss_dssp TCCCSCCSGGGEEECTTSCEEECCCCC-----------------------------------------------------
T ss_pred CccccCCCcceEEEeCCCcEEEeecccccccccc----------------------------------------------
Confidence 9999999999999999999999999887322110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+++.|+|||++.+..++.++|||||||+
T Consensus 171 -----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 203 (278)
T 1byg_A 171 -----------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 203 (278)
T ss_dssp ----------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred -----------------------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHH
Confidence 000246888999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 204 l~~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 204 LWEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHHHHTTSCCSCTTSCGG-GHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 999997 55544332 333344433222222223344559999999999999999999985
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=283.23 Aligned_cols=207 Identities=17% Similarity=0.117 Sum_probs=156.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. ...+++|||| .+++|.+++.... +++.+++.++.||+.||.|||++|
T Consensus 79 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~ 154 (318)
T 3lxp_A 79 GWKQEIDILRTLYHEHIIKYKG-CCEDAG-AASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH 154 (318)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT-TTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcchhhEEE-EEecCC-CceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 554432 2368999999 7899999996543 999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+......... +
T Consensus 155 ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~----------- 191 (318)
T 3lxp_A 155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY--------------------------------Y----------- 191 (318)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSE--------------------------------E-----------
T ss_pred ccCCCCchheEEEcCCCCEEECCccccccccccccc--------------------------------c-----------
Confidence 999999999999999999999999988443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 192 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 227 (318)
T 3lxp_A 192 --------------------------------------------RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 227 (318)
T ss_dssp --------------------------------------------EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHH
Confidence 000113578899999999988899999999999999
Q ss_pred hhccc---cCCCCchH--------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~--------------~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... ......+.....++......+...+||.+||+.||.+|||+.|+++
T Consensus 228 ~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 228 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999 44332111 1112222223333322233344569999999999999999999985
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=283.18 Aligned_cols=205 Identities=18% Similarity=0.248 Sum_probs=157.5
Q ss_pred hchhhhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.++. ||||+++++ ++.... .++++||+ .+ ++|.+++... ..+++..++.++.||+.||.|||
T Consensus 92 ~~~~E~~~l~~l~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH 166 (320)
T 3a99_A 92 RVPMEVVLLKKVSSGFSGVIRLLD-WFERPD---SFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH 166 (320)
T ss_dssp EEEHHHHHHHHHCSSSCSBCCEEE-EEECSS---EEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCCceEEEE-EEecCC---cEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 3446777888875 599999999 555443 57999999 44 8999999554 34999999999999999999999
Q ss_pred HCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 SQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+|||++ .++.+||+|||++.......
T Consensus 167 ~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------ 204 (320)
T 3a99_A 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV------------------------------------------ 204 (320)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC------------------------------------------
T ss_pred HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccccc------------------------------------------
Confidence 99999999999999999 78899999988874321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwS 296 (720)
.....||+.|+|||++.+..+ +.++||||
T Consensus 205 --------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s 234 (320)
T 3a99_A 205 --------------------------------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 234 (320)
T ss_dssp --------------------------------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHH
T ss_pred --------------------------------------------------ccCCCCCccCCChHHhccCCCCCccchHHh
Confidence 001368999999999987765 78999999
Q ss_pred hhchhhhccccCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 297 LGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 297 LGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|||++|||+++..++....... ..... +.... +...+||.+||+.||.+|||+.|+++||||+....+
T Consensus 235 lG~il~el~~g~~pf~~~~~~~---~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 235 LGILLYDMVCGDIPFEHDEEII---RGQVF---FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 303 (320)
T ss_dssp HHHHHHHHHHSSCSCCSHHHHH---HCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred HHHHHHHHHHCCCCCCChhhhh---ccccc---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence 9999999999433332222211 11111 11223 344599999999999999999999999999987543
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=285.27 Aligned_cols=212 Identities=15% Similarity=0.152 Sum_probs=160.3
Q ss_pred hhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~a 133 (720)
..+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++.... ..+++.+++.++.||+.|
T Consensus 77 ~~~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a 152 (327)
T 2yfx_A 77 ELDFLMEALIISKFNHQNIVRCIG-VSLQSL---PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152 (327)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCCeEEE-EEcCCC---CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHH
Confidence 335557888999999999999999 554443 46999999 7999999995432 348999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
|.|||++||+||||||+|||++. ...++|+|||.+........ .
T Consensus 153 l~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~ 199 (327)
T 2yfx_A 153 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY---------------------------------Y 199 (327)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------------------------------------
T ss_pred HHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccc---------------------------------c
Confidence 99999999999999999999984 44699998887732110000 0
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
.......||+.|+|||++.+..++.
T Consensus 200 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 224 (327)
T 2yfx_A 200 -------------------------------------------------------RKGGCAMLPVKWMPPEAFMEGIFTS 224 (327)
T ss_dssp ---------------------------------------------------------CCGGGSCGGGCCHHHHHHCCCCH
T ss_pred -------------------------------------------------------ccCCCcCCCcceeCHhHhcCCCCCc
Confidence 0001136789999999998888999
Q ss_pred cccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
++|||||||++|+|++ ||...... .....+.....++......+...+||.+||+.||.+|||+.+++++.++.
T Consensus 225 ~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 225 KTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCcCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 9999999999999997 55554333 34444444333322222334455999999999999999999999976643
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=303.29 Aligned_cols=205 Identities=14% Similarity=0.113 Sum_probs=159.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.++|......+++..++.|+.||+.||.|||++|
T Consensus 382 ~~~~E~~il~~l~hpniv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 456 (613)
T 2ozo_A 382 EMMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 456 (613)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EeccC----CeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 55543 47999999 899999999666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++..+..... +
T Consensus 457 iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------~----------- 493 (613)
T 2ozo_A 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y----------- 493 (613)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------------------------------------------------
T ss_pred EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce--------------------------------e-----------
Confidence 999999999999999999999999988543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......+|+.|+|||++.+..++.++|||||||+|
T Consensus 494 --------------------------------------------~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l 529 (613)
T 2ozo_A 494 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 529 (613)
T ss_dssp ----------------------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHH
Confidence 000012457899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ..+..+..+..++......+...+||.+||+.||.+||++.+|++
T Consensus 530 ~ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 530 WEALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp HHHHTTSCCTTTTCCSH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99997 67665443 344445444333322223344559999999999999999999874
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=276.90 Aligned_cols=204 Identities=17% Similarity=0.233 Sum_probs=153.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++||||+++++ ++.... .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 78 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (310)
T 2wqm_A 78 DCIKEIDLLKQLNHPNVIKYYA-SFIEDN---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153 (310)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEcCC---cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 4457888999999999999999 444433 67999999 88899999943 3455999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+||+++.++.++|+|||++........
T Consensus 154 ~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 191 (310)
T 2wqm_A 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 191 (310)
T ss_dssp HTTCCCCCCCGGGEEECTTSCEEECCC-----------------------------------------------------
T ss_pred hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc------------------------------------------
Confidence 99999999999999999999999999988743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 192 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 223 (310)
T 2wqm_A 192 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 223 (310)
T ss_dssp -------------------------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHH
Confidence 00013679999999999998899999999999
Q ss_pred chhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||.... ........+....+++.....++. ..+|+.+||+.||.+|||+.++++
T Consensus 224 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 224 CLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp HHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999 665432 222334444444444443344444 459999999999999999999986
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=284.19 Aligned_cols=216 Identities=12% Similarity=0.107 Sum_probs=153.0
Q ss_pred hhhchhhhhhcccCCCCCceecccceee-cCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~-~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+..+.+...+..++||||+++++.+.. .......+|+|||| .+++|.+++.... .++..++.++.||+.||.|||
T Consensus 51 ~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH 128 (336)
T 3g2f_A 51 NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH 128 (336)
T ss_dssp HHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH
Confidence 3445566666778999999999973322 22223357999999 7999999996544 589999999999999999999
Q ss_pred HC---------CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccc
Q 004989 139 SQ---------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 139 s~---------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
++ ||+||||||+|||++.++.+||+|||++........... ..
T Consensus 129 ~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~----------------------------~~ 180 (336)
T 3g2f_A 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP----------------------------GE 180 (336)
T ss_dssp CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC--------------------------------
T ss_pred hhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc----------------------------cc
Confidence 99 999999999999999999999999998854322110000 00
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC----
Q 004989 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---- 285 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---- 285 (720)
.........||+.|+|||++.+
T Consensus 181 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~ 206 (336)
T 3g2f_A 181 ------------------------------------------------------EDNAAISEVGTIRYMAPEVLEGAVNL 206 (336)
T ss_dssp -----------------------------------------------------------CCTTSCGGGCCHHHHTTCCCG
T ss_pred ------------------------------------------------------cccccccCCCccceeCchhhcCCccc
Confidence 0000112478999999999987
Q ss_pred ---CCCCccccchhhhchhhhccc---cCCCCch-----------------HHHHHHHhhcCCCCccccccCc-------
Q 004989 286 ---APVSCASDIYRLGVLLFELFC---PFSTGEE-----------------KTRTMSSLRHRVLPPQLLLKFP------- 335 (720)
Q Consensus 286 ---~~~s~~sDIwSLGvll~eLlt---pf~~~~~-----------------~~~~~~~l~~~~~p~~~~~~~p------- 335 (720)
..++.++|||||||++|||++ ||.+... .......+......+.++..++
T Consensus 207 ~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (336)
T 3g2f_A 207 RDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVR 286 (336)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHH
T ss_pred ccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHH
Confidence 346789999999999999997 4432111 1111122222222333333222
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
...+||.+||+.||++|||+.|+++
T Consensus 287 ~l~~li~~cl~~dP~~Rps~~e~l~ 311 (336)
T 3g2f_A 287 SLKETIEDCWDQDAEARLTAQXAEE 311 (336)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHhcCChhhCcchHHHHH
Confidence 3569999999999999999999965
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-31 Score=298.10 Aligned_cols=203 Identities=19% Similarity=0.170 Sum_probs=158.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.++|.. ....+++..++.|+.||+.||.|||++|
T Consensus 263 ~~~E~~~l~~l~hpniv~l~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 338 (495)
T 1opk_A 263 FLKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 338 (495)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCEeeEEE-EEecCC---cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347888999999999999999 555443 57999999 88999999954 3445899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........
T Consensus 339 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-------------------------------------------- 374 (495)
T 1opk_A 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-------------------------------------------- 374 (495)
T ss_dssp EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE--------------------------------------------
T ss_pred cccCCCChhhEEECCCCcEEEeecccceeccCCcee--------------------------------------------
Confidence 999999999999999999999999987443111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+++.|+|||++.+..++.++|||||||+|
T Consensus 375 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l 409 (495)
T 1opk_A 375 ---------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 409 (495)
T ss_dssp ---------------------------------------------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHH
Confidence 00002457889999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+......+......+...+||.+||+.||.+|||+.+|++
T Consensus 410 ~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 410 WEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 99998 66554433 333344433322222223344559999999999999999999986
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-31 Score=281.47 Aligned_cols=205 Identities=16% Similarity=0.173 Sum_probs=159.1
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 86 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
T 2pvf_A 86 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161 (334)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEeeEEE-EEccCC---ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHH
Confidence 444788889988 8999999999 554443 57999999 8899999995433 2489999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++...+....
T Consensus 162 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------------------- 212 (334)
T 2pvf_A 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----------------------------- 212 (334)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-----------------------------
T ss_pred HHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-----------------------------
Confidence 999999999999999999999999999999999999999998743321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+ .......+|+.|+|||++.+
T Consensus 213 ----~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~ 233 (334)
T 2pvf_A 213 ----Y-------------------------------------------------------KKTTNGRLPVKWMAPEALFD 233 (334)
T ss_dssp ----E-------------------------------------------------------ECCSCCCCCGGGCCHHHHHH
T ss_pred ----c-------------------------------------------------------cccCCCCcccceeChHHhcC
Confidence 0 00001356889999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 889999999999999999998 56554332 344444444333333333345569999999999999999999986
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=296.36 Aligned_cols=203 Identities=13% Similarity=0.133 Sum_probs=158.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|||||++++ ++... .+|+|||| .+++|.++|... ...+++..++.++.||+.||.|||++
T Consensus 229 ~~~~E~~~l~~l~h~~iv~l~~-~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 303 (454)
T 1qcf_A 229 AFLAEANVMKTLQHDKLVKLHA-VVTKE----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303 (454)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCCCEeeEEE-EEeCC----ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3447888999999999999999 55422 47999999 899999999543 23589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||+++...... +
T Consensus 304 ~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~----------------------------------~---------- 339 (454)
T 1qcf_A 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE----------------------------------Y---------- 339 (454)
T ss_dssp TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH----------------------------------H----------
T ss_pred CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc----------------------------------e----------
Confidence 99999999999999999999999998874321100 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ......+|+.|+|||++.+..++.++|||||||+
T Consensus 340 --------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~ 374 (454)
T 1qcf_A 340 --------------------------T-------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL 374 (454)
T ss_dssp --------------------------H-------------------TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred --------------------------e-------------------ccCCCcccccccCHHHhccCCCCcHHHHHhHHHH
Confidence 0 0000245788999999998889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.+|+.
T Consensus 375 l~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 375 LMEIVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 999998 67665443 344444444333332233344559999999999999999999975
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-31 Score=273.92 Aligned_cols=203 Identities=15% Similarity=0.149 Sum_probs=157.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++..+ .++++||| .+++|.+++.... ..+++.+++.++.||+.||.|||++
T Consensus 54 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 128 (279)
T 1qpc_A 54 AFLAEANLMKQLQHQRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128 (279)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCcCcceEEE-EEcCC----CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447788999999999999999 55433 36899999 7999999995432 2589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+.........
T Consensus 129 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------- 165 (279)
T 1qpc_A 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT------------------------------------------- 165 (279)
T ss_dssp TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-------------------------------------------
T ss_pred CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc-------------------------------------------
Confidence 9999999999999999999999999887432111000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......+|+.|+|||++.+..++.++|||||||+
T Consensus 166 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 199 (279)
T 1qpc_A 166 ----------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199 (279)
T ss_dssp ----------------------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCCCccCccChhhhccCCCCchhhhHHHHHH
Confidence 0001346889999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... .....+.....+.......+...+|+.+||..||.+|||+.++++
T Consensus 200 l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 200 LTEIVTHGRIPYPGMTNP-EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCcccCHH-HHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999998 56554443 344444443322222223344559999999999999999999985
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-31 Score=277.54 Aligned_cols=205 Identities=14% Similarity=0.146 Sum_probs=152.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++.+++||||+++++ ++.+.. ..+++||| .+++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 76 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 151 (307)
T 2nru_A 76 QFDQEIKVMAKCQHENLVELLG-FSSDGD---DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151 (307)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEEEEE-EEecCC---ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 4447888999999999999999 554443 56999999 79999999943 23459999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.++|+|||.+...+.....
T Consensus 152 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------ 189 (307)
T 2nru_A 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT------------------------------------------ 189 (307)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC------------------------------------------
T ss_pred CCeecCCCCHHHEEEcCCCcEEEeeccccccccccccc------------------------------------------
Confidence 99999999999999999999999999887432111000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+. ++.++|||||||
T Consensus 190 ----------------------------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~ 222 (307)
T 2nru_A 190 ----------------------------------------------VMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGV 222 (307)
T ss_dssp ----------------------------------------------EECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCCcCcCChHHhcCC-CCccchhHHHHH
Confidence 000114689999999998764 899999999999
Q ss_pred hhhhccc---cCCCCchH---HHHHHHhhc----------CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 300 LLFELFC---PFSTGEEK---TRTMSSLRH----------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~---~~~~~~l~~----------~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|+|++ ||...... ......+.. ..+++......+...+|+.+||+.||.+|||+.++++
T Consensus 223 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 223 VLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp HHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999999 56543221 111111111 1111111111123458999999999999999999986
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=273.37 Aligned_cols=211 Identities=17% Similarity=0.146 Sum_probs=156.9
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..+.|++++..+..++.... ..+++|||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 127 (296)
T 4hgt_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEGD---YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEETT---EEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhcCCCCCCeeeeecCCCC---ceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3467778899999999988884444433 6799999999999999975556699999999999999999999999999
Q ss_pred eccCCCCcEEE---ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 144 VHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||+ +.++.+||+|||.+........... .
T Consensus 128 H~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~------------------------------~---------- 167 (296)
T 4hgt_A 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------I---------- 167 (296)
T ss_dssp CSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred cCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCcc------------------------------C----------
Confidence 99999999999 7889999999998854322210000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 168 ------------------------------------------~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 204 (296)
T 4hgt_A 168 ------------------------------------------P-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 204 (296)
T ss_dssp ------------------------------------------C-CCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------C-CCcccccCCCccccchHHhcCCCCCchhHHHHHHHH
Confidence 0 000012478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchH--HHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC---PFSTGEEK--TRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt---pf~~~~~~--~~~~~~l~~---~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... ...+..+.. ....+.....+| ...+|+.+||+.||.+|||+.++++
T Consensus 205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 999999 67543211 011111111 111112223334 4559999999999999999999986
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=304.61 Aligned_cols=203 Identities=13% Similarity=0.110 Sum_probs=157.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ +++.+ .+++|||| .+++|.++|... ..+++..++.|+.||+.||.|||++||
T Consensus 417 ~~~E~~il~~l~hpnIv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~i 490 (635)
T 4fl3_A 417 LLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNF 490 (635)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecC----CEEEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347888999999999999999 66543 47899999 899999999554 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+||||+.++.+||+|||+++....... +
T Consensus 491 iHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~---------------------------------~------------ 525 (635)
T 4fl3_A 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---------------------------------Y------------ 525 (635)
T ss_dssp CCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------------------------------------------
T ss_pred eCCCCChHhEEEeCCCCEEEEEcCCccccccCcc---------------------------------c------------
Confidence 9999999999999999999999998854321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........||+.|+|||++.+..++.++|||||||++|
T Consensus 526 ------------------------------------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ 563 (635)
T 4fl3_A 526 ------------------------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 563 (635)
T ss_dssp ---------------------------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHH
Confidence 00001134688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+||.+||+.||.+||++.+|++
T Consensus 564 ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 564 EAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 9997 67665443 344444444333322223344559999999999999999999975
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-31 Score=293.56 Aligned_cols=207 Identities=14% Similarity=0.153 Sum_probs=158.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++||||+++++ ++..+ .+|+|||| .+++|.++|.. .+..+++.+++.++.||+.||.|||++|
T Consensus 226 ~~~E~~~l~~l~hp~iv~~~~-~~~~~----~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 300 (452)
T 1fmk_A 226 FLQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300 (452)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEcCC----ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347888999999999999999 55442 47999999 88999999943 2345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........
T Consensus 301 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-------------------------------------------- 336 (452)
T 1fmk_A 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------------------------------------------- 336 (452)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCCTTC----------------------------------------------------
T ss_pred eeCCCCChhhEEECCCCCEEECCCccceecCCCcee--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 337 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l 371 (452)
T 1fmk_A 337 ---------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371 (452)
T ss_dssp ---------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCcccccccCHhHHhcCCCCccccHHhHHHHH
Confidence 00012467889999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc--CcccCC
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 366 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~--hp~~~~ 366 (720)
|||++ ||...... .....+..+..++.. ..+| ...+||.+||+.||.+|||+.++++ ..++..
T Consensus 372 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 372 TELTTKGRVPYPGMVNR-EVLDQVERGYRMPCP-PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCC-TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCC-CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 99998 66655443 344444444333322 3344 4559999999999999999999986 344443
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=277.14 Aligned_cols=205 Identities=18% Similarity=0.271 Sum_probs=153.5
Q ss_pred hchhhhhhcccC----CCCCceecccceeecCCCCCcEEEEEec--CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHG----DHLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~L~~l----~HpnIV~l~~~~~~~~~~~~~~~lv~E~--~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+..+|..++.++ +||||+++++ ++.... .++++||+ .+++|.+++.... .+++..++.++.||+.||.|
T Consensus 80 ~~~~e~~~l~~l~~~~~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~ 154 (312)
T 2iwi_A 80 TCPLEVALLWKVGAGGGHPGVIRLLD-WFETQE---GFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQH 154 (312)
T ss_dssp CCCHHHHHHHHHHSSCCCSSBCCEEE-EC--------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCCCCCeeeEEE-EEecCC---eEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Confidence 444677777777 8999999999 554443 46889997 6899999995543 49999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 137 AHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
||++||+||||||+||+++ .++.++|+|||.+.......
T Consensus 155 lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~---------------------------------------- 194 (312)
T 2iwi_A 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---------------------------------------- 194 (312)
T ss_dssp HHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC----------------------------------------
T ss_pred HHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc----------------------------------------
Confidence 9999999999999999999 88999999998874321110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDI 294 (720)
.....||+.|+|||++.+..+ +.++||
T Consensus 195 ----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di 222 (312)
T 2iwi_A 195 ----------------------------------------------------YTDFDGTRVYSPPEWISRHQYHALPATV 222 (312)
T ss_dssp ----------------------------------------------------BCCCCSCTTTSCHHHHHHSCBCHHHHHH
T ss_pred ----------------------------------------------------ccccCCcccccCceeeecCCCCCccchH
Confidence 001357999999999977665 569999
Q ss_pred hhhhchhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 295 YRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 295 wSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||||++|||+++..++......... ...++. ...+...+||.+||+.||.+|||+.|+++||||+....
T Consensus 223 ~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 223 WSLGILLYDMVCGDIPFERDQEILEA--ELHFPA---HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp HHHHHHHHHHHHSSCSCCSHHHHHHT--CCCCCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred HHHHHHHHHHHHCCCCCCChHHHhhh--ccCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 99999999999943333222222111 111221 12344569999999999999999999999999998754
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-30 Score=272.00 Aligned_cols=211 Identities=18% Similarity=0.160 Sum_probs=156.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..+.|++++..+..+.... ...+++|||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~---~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv 127 (296)
T 3uzp_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEG---DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhhcCCCCCccccccCCC---CceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346777899999999888887344433 26799999999999999965556699999999999999999999999999
Q ss_pred eccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 144 VHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++ .++.+||+|||.+........... .
T Consensus 128 H~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~---------- 167 (296)
T 3uzp_A 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------I---------- 167 (296)
T ss_dssp CSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred eCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc------------------------------c----------
Confidence 999999999994 888999999998854322100000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 168 ------------------------------------------~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 204 (296)
T 3uzp_A 168 ------------------------------------------P-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 204 (296)
T ss_dssp ------------------------------------------C-CCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------c-cccccccccccccCChhhhcCCCCCcchhhHHHHHH
Confidence 0 000112478999999999999989999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC---PFSTGEE--KTRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~~---~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||..... ....+..+.. ....+.+...+| ...+|+.+||+.||.+|||+.++++
T Consensus 205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 999999 6654211 0011111111 111122223344 4459999999999999999999985
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-30 Score=301.20 Aligned_cols=213 Identities=15% Similarity=0.137 Sum_probs=157.5
Q ss_pred hchhhhhhcccCCCCCceecccceeec---CCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCEN---EAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~---~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~y 136 (720)
+..+|..+|.+++||||+++++ ++.. .......|+|||| .|++|.+++.... ..+++..++.++.||+.||.|
T Consensus 58 ~~~~Ei~iL~~L~HpnIV~l~~-v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~y 136 (676)
T 3qa8_A 58 RWCLEIQIMKKLNHPNVVSARE-VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136 (676)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-CCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCceee-eecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 4457888999999999999999 4332 1123457999999 7999999996533 358999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
||++||+||||||+||+++.++. ++|+|||.+...+...
T Consensus 137 LHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~-------------------------------------- 178 (676)
T 3qa8_A 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-------------------------------------- 178 (676)
T ss_dssp HHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC--------------------------------------
T ss_pred HHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc--------------------------------------
Confidence 99999999999999999997665 8998888874321110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
......||+.|+|||++.+..++.++|
T Consensus 179 -----------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksD 205 (676)
T 3qa8_A 179 -----------------------------------------------------LCTEFVGTLQYLAPELLEQKKYTVTVD 205 (676)
T ss_dssp -----------------------------------------------------CCCCCCSCCTTCSSCSSCCSCCSTTHH
T ss_pred -----------------------------------------------------ccccccCCcccCChHHhccCCCCchhH
Confidence 001146899999999999888999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhh---------c----C--------CCCccccccCch-HHHHHHHcCCCC
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLR---------H----R--------VLPPQLLLKFPK-EASFCLWLLHPE 348 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~---------~----~--------~~p~~~~~~~p~-~~~Li~~~L~~d 348 (720)
||||||++|+|++ ||.+..........+. . + ..|..+...++. ..+||.+||.+|
T Consensus 206 IwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~D 285 (676)
T 3qa8_A 206 YWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWH 285 (676)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCC
Confidence 9999999999999 6655322211100000 0 0 001112222333 349999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004989 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.++++||||...
T Consensus 286 P~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 286 QRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp CC---CCTTCCCCTTHHHH
T ss_pred HhhCcCHHHHhcCHHHHHH
Confidence 9999999999999999875
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-30 Score=277.50 Aligned_cols=209 Identities=18% Similarity=0.139 Sum_probs=155.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... ...+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 88 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 165 (326)
T 2w1i_A 88 DFEREIEILKSLQHDNIVKYKG-VCYSAG-RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165 (326)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECC-----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEEecC-CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 443322 2257999999 789999999766556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 166 ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~----------- 202 (326)
T 2w1i_A 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY--------------------------------Y----------- 202 (326)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE--------------------------------E-----------
T ss_pred EeccCCCcceEEEcCCCcEEEecCcchhhccccccc--------------------------------c-----------
Confidence 999999999999999999999999987443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||++.+..++.++|||||||++
T Consensus 203 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 238 (326)
T 2w1i_A 203 ------------------------K--------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 238 (326)
T ss_dssp ------------------------E--------------------CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c--------------------cccCCCCceeEECchhhcCCCCCchhhHHHHHHHH
Confidence 0 00013567889999999988899999999999999
Q ss_pred hhccccCCCCchH------------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFCPFSTGEEK------------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~~~~------------------~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+.... ......+.....++......+...+||.+||..||.+|||+.|+++
T Consensus 239 ~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 239 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999932221111 0111222222222222223344559999999999999999999985
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-30 Score=274.76 Aligned_cols=218 Identities=12% Similarity=0.110 Sum_probs=156.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++..++||||+++++.+.........+|+|||| .+++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 72 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH 151 (317)
T 2buj_A 72 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151 (317)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999444333334468999999 88899999943 4556999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.++|+|||.+......... .
T Consensus 152 ~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~-------- 191 (317)
T 2buj_A 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG--------------------------------S-------- 191 (317)
T ss_dssp HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES--------------------------------H--------
T ss_pred hCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccc--------------------------------c--------
Confidence 999999999999999999999999999987432110000 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccch
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIw 295 (720)
...... .......||+.|+|||++.+.. ++.++|||
T Consensus 192 -----------------------~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~ 230 (317)
T 2buj_A 192 -----------------------RQALTL------------------QDWAAQRCTISYRAPELFSVQSHCVIDERTDVW 230 (317)
T ss_dssp -----------------------HHHHHH------------------HHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHH
T ss_pred -----------------------cccccc------------------cccccccCCcccCCHhHhccCCCcCCCchhhHH
Confidence 000000 0001136799999999997665 68999999
Q ss_pred hhhchhhhccccCCCCchHH----HHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 296 RLGVLLFELFCPFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 296 SLGvll~eLltpf~~~~~~~----~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||++|||+++..++.... .....+......+......+...+||.+||..||.+|||+.+++++
T Consensus 231 slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 231 SLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 99999999999433322110 1111222222222222233455699999999999999999999974
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-30 Score=282.53 Aligned_cols=212 Identities=11% Similarity=0.048 Sum_probs=153.9
Q ss_pred chhhhhhcccCCCCCceecccc--------------eeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSG--------------VCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~--------------~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~ 128 (720)
..+|..++.+++|||||++++. ++.. ....+|+||||.+++|.+++... ...+++.+++.|+.
T Consensus 89 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~ 166 (352)
T 2jii_A 89 LFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVH--QDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVAC 166 (352)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEE--TTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcccchhhhhhhhccCCccCccchhhcccc--CCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHH
Confidence 3477789999999999985431 2222 12368999999999999999543 35599999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCC--ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
||+.||.|||++||+||||||+|||++.++ .+||+|||++.........
T Consensus 167 qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~----------------------------- 217 (352)
T 2jii_A 167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKH----------------------------- 217 (352)
T ss_dssp HHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCC-----------------------------
T ss_pred HHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcc-----------------------------
Confidence 999999999999999999999999999888 8999999988543211000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC
Q 004989 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
..+ .........||+.|+|||++.+.
T Consensus 218 -~~~-----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~ 243 (352)
T 2jii_A 218 -VAY-----------------------------------------------------VEGSRSPHEGDLEFISMDLHKGC 243 (352)
T ss_dssp -CCC-----------------------------------------------------CTTSSCTTCSCTTTCCHHHHTTC
T ss_pred -ccc-----------------------------------------------------cccccccccCCccccCHHHHccC
Confidence 000 00000124789999999999998
Q ss_pred CCCccccchhhhchhhhccc---cCCCCc-hHHHHHHHhhc-CCCCcccc------cc-CchHHHHHHHcCCCCCCCCCC
Q 004989 287 PVSCASDIYRLGVLLFELFC---PFSTGE-EKTRTMSSLRH-RVLPPQLL------LK-FPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt---pf~~~~-~~~~~~~~l~~-~~~p~~~~------~~-~p~~~~Li~~~L~~dP~~Rpt 354 (720)
.++.++|||||||++|||++ ||.... ........... ...++.+. .. .+...+|+.+||..||.+|||
T Consensus 244 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 323 (352)
T 2jii_A 244 GPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPP 323 (352)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCC
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCC
Confidence 89999999999999999999 665432 11112211110 00111111 12 344569999999999999999
Q ss_pred hHHHHc
Q 004989 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 324 ~~~l~~ 329 (352)
T 2jii_A 324 YAMLRN 329 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=277.60 Aligned_cols=217 Identities=18% Similarity=0.240 Sum_probs=140.2
Q ss_pred hchhhhhhcccCC-CCCceecccceeec----CCCCCcEEEEEecCCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~----~~~~~~~~lv~E~~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..++.++. ||||+++++.+... ......++++|||.+++|.+++.. ....+++.+++.++.||+.||.
T Consensus 71 ~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~ 150 (337)
T 3ll6_A 71 AIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150 (337)
T ss_dssp HHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence 3347777888885 99999999944321 122335899999977899999843 3445999999999999999999
Q ss_pred HHHHCC--ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 136 AAHSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 136 yLHs~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|||++| |+||||||+|||++.++.+||+|||++...+..... .+ .
T Consensus 151 ~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~--~ 197 (337)
T 3ll6_A 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDY-------------------------------SW--S 197 (337)
T ss_dssp HHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC--------------------------------------
T ss_pred HHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcc-------------------------------cc--c
Confidence 999999 999999999999999999999999998654322100 00 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc---cCCCCCc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSC 290 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l---~~~~~s~ 290 (720)
. .............||+.|+|||++ .+..++.
T Consensus 198 ~---------------------------------------------~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~ 232 (337)
T 3ll6_A 198 A---------------------------------------------QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGE 232 (337)
T ss_dssp -----------------------------------------------------------------------CCTTSCSSH
T ss_pred c---------------------------------------------cccccchhhccccCCCCcCChhhhhccccCCCCh
Confidence 0 000000001124689999999998 4556899
Q ss_pred cccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
++|||||||++|||++ ||...... ..+......+......+...+||.+||++||.+|||+.|++++
T Consensus 233 ~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 233 KQDIWALGCILYLLCFRQHPFEDGAKL----RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp HHHHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHhHHHHHHHHHHHHhCCCCCcchhHH----HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999999 55433221 1111111112222233455699999999999999999999974
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-30 Score=300.90 Aligned_cols=203 Identities=18% Similarity=0.167 Sum_probs=158.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.++ .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 437 ~~~~E~~~l~~l~HpnIv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 511 (656)
T 2j0j_A 437 KFLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511 (656)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEecC----ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 55332 46999999 889999999766556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 512 ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~-------------------------------------------- 547 (656)
T 2j0j_A 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------------------------------------------- 547 (656)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------------------------------------------------
T ss_pred ccccccchHhEEEeCCCCEEEEecCCCeecCCCcce--------------------------------------------
Confidence 999999999999999999999999988443111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 548 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il 582 (656)
T 2j0j_A 548 ---------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 582 (656)
T ss_dssp ---------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+||.+||+.||.+|||+.++++
T Consensus 583 ~ellt~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 583 WEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHcCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99996 66655443 344444444333322233345569999999999999999999985
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-30 Score=279.97 Aligned_cols=207 Identities=12% Similarity=0.121 Sum_probs=151.2
Q ss_pred hhhhhccc--CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----
Q 004989 66 SDGVELTH--GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---- 138 (720)
Q Consensus 66 ~e~~~L~~--l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH---- 138 (720)
+|..++.. ++||||+++++.+.........+|++||| .+++|.+++.+. .+++.+++.++.||+.||.|||
T Consensus 83 ~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~ 160 (342)
T 1b6c_B 83 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIV 160 (342)
T ss_dssp HHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444 89999999999444444333468999999 888999999653 4899999999999999999999
Q ss_pred ----HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 139 ----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 139 ----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 161 ~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~---- 204 (342)
T 1b6c_B 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I---- 204 (342)
T ss_dssp STTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E----
T ss_pred hhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccc--------------------------------c----
Confidence 899999999999999999999999999987432111000 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC------C
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------V 288 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~ 288 (720)
. .......||+.|+|||++.+.. +
T Consensus 205 -------------------------------~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 234 (342)
T 1b6c_B 205 -------------------------------D-------------------IAPNHRVGTKRYMAPEVLDDSINMKHFES 234 (342)
T ss_dssp -------------------------------E-------------------ECCCSCCCCGGGCCHHHHTSCCCTTCHHH
T ss_pred -------------------------------c-------------------cccccCCcCcccCCHhhhccccccccccc
Confidence 0 0001146899999999998763 3
Q ss_pred Cccccchhhhchhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccccC------chHHHHHHHcC
Q 004989 289 SCASDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLLKF------PKEASFCLWLL 345 (720)
Q Consensus 289 s~~sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~~~------p~~~~Li~~~L 345 (720)
+.++|||||||++|||+++ |... .........+......+.+...+ +...+|+.+||
T Consensus 235 ~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 314 (342)
T 1b6c_B 235 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 314 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHC
T ss_pred CCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHh
Confidence 4789999999999999973 3221 11223333343333333333222 23459999999
Q ss_pred CCCCCCCCChHHHHc
Q 004989 346 HPEPSGRPKMGELLQ 360 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~ 360 (720)
+.||.+|||+.++++
T Consensus 315 ~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 315 YANGAARLTALRIKK 329 (342)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred ccChhhCCCHHHHHH
Confidence 999999999999986
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-30 Score=286.94 Aligned_cols=204 Identities=15% Similarity=0.174 Sum_probs=152.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..+|.+++||||+++++ ++.... ...+|+|||| .|++|.+++... ...+++.+++.++.||+.||.|||++
T Consensus 54 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 131 (396)
T 4eut_A 54 QMREFEVLKKLNHKNIVKLFA-IEEETT-TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131 (396)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECTT-TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCeEEE-eeccCC-CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 347888999999999999999 544432 3367999999 789999999543 22389999999999999999999999
Q ss_pred CceeccCCCCcEEE----ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 141 GIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 141 gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+||||||+|||+ +..+.+||+|||.+.......
T Consensus 132 ~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~----------------------------------------- 170 (396)
T 4eut_A 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------------------------------- 170 (396)
T ss_dssp TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG-----------------------------------------
T ss_pred CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC-----------------------------------------
Confidence 99999999999999 677779998888874321110
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC--------CCC
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--------APV 288 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--------~~~ 288 (720)
......||+.|+|||++.+ ..+
T Consensus 171 --------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 200 (396)
T 4eut_A 171 --------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKY 200 (396)
T ss_dssp --------------------------------------------------GSSCSSSCCTTCCHHHHHHHCC--CHHHHH
T ss_pred --------------------------------------------------ccccccCCccccCHHHhhccccccccccCC
Confidence 0011468999999999865 447
Q ss_pred Cccccchhhhchhhhccc---cCCCC---chHHHHHHHhhcCCCCcc-----------------------ccccCc-hHH
Q 004989 289 SCASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPPQ-----------------------LLLKFP-KEA 338 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt---pf~~~---~~~~~~~~~l~~~~~p~~-----------------------~~~~~p-~~~ 338 (720)
+.++|||||||++|||++ ||.+. ......+..+..+..+.. +....+ ...
T Consensus 201 ~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 280 (396)
T 4eut_A 201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLT 280 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhch
Confidence 889999999999999999 66432 222334444433322211 001112 234
Q ss_pred HHHHHcCCCCCCCCCChHHHHc
Q 004989 339 SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 339 ~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+.+||.+||++||++.++++
T Consensus 281 ~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 281 PVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp HHHHHHSCCCTTTSCCHHHHHH
T ss_pred HHHHHhhccChhhhccHHHHHH
Confidence 8999999999999999999865
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-30 Score=295.61 Aligned_cols=207 Identities=14% Similarity=0.158 Sum_probs=159.9
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|+.+|.+++|||||++++ ++... .+|+|||| .+++|.++|.. .+..+++.+++.|+.||+.||.|||++|
T Consensus 309 ~~~E~~~l~~l~hpniv~~~~-~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 383 (535)
T 2h8h_A 309 FLQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 383 (535)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEeec----cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347888999999999999999 55442 47999999 88999999943 2345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++...... +
T Consensus 384 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------------------------~----------- 418 (535)
T 2h8h_A 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------Y----------- 418 (535)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH----------------------------------H-----------
T ss_pred eeCCCCCHhhEEEcCCCcEEEcccccceecCCCc----------------------------------e-----------
Confidence 9999999999999999999999999884321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||++.+..++.++|||||||+|
T Consensus 419 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l 454 (535)
T 2h8h_A 419 -------------------------T-------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 454 (535)
T ss_dssp -------------------------H-------------------TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------e-------------------cccCCcCcccccCHHHhccCCCCchhhHHHHHHHH
Confidence 0 00002457889999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc--CcccCC
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 366 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~--hp~~~~ 366 (720)
|||++ ||...... .....+..+...+. ...++. ..+||.+||+.||++|||+.+|++ ..++..
T Consensus 455 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 455 TELTTKGRVPYPGMVNR-EVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHTTTTCCSSTTCCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 99998 66655443 34444444433222 233444 559999999999999999999986 244443
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-31 Score=292.85 Aligned_cols=175 Identities=13% Similarity=0.141 Sum_probs=135.2
Q ss_pred CCcEEEEEecCCCCHHHHHh------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecC
Q 004989 93 IDPFVHAIEWGDVSLRQWLD------KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 93 ~~~~~lv~E~~ggsL~~~L~------~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
...++++|++.+++|.++++ .....+++..++.++.||+.||.|||++|||||||||+|||++.++.+||+|||
T Consensus 177 ~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG 256 (413)
T 3dzo_A 177 VLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFE 256 (413)
T ss_dssp CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGG
T ss_pred ccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEecc
Confidence 44578999998899999983 234457888999999999999999999999999999999999999999999888
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004989 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
+++..+..
T Consensus 257 ~a~~~~~~------------------------------------------------------------------------ 264 (413)
T 3dzo_A 257 HLVRDGAS------------------------------------------------------------------------ 264 (413)
T ss_dssp GCEETTEE------------------------------------------------------------------------
T ss_pred ceeecCCc------------------------------------------------------------------------
Confidence 87322100
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCcccc----------cCCCCCccccchhhhchhhhccc---cCCCCch
Q 004989 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----------AGAPVSCASDIYRLGVLLFELFC---PFSTGEE 313 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----------~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~ 313 (720)
....+| +.|+|||++ .+..++.++|||||||++|||++ ||.....
T Consensus 265 ---------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~ 322 (413)
T 3dzo_A 265 ---------------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA 322 (413)
T ss_dssp ---------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred ---------------------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence 011467 999999999 55558999999999999999999 6655432
Q ss_pred HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 314 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 314 ~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.. ....+ ++. .....+...+||.+||++||.+|||+.++++||||+..
T Consensus 323 ~~-~~~~~----~~~-~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 323 LG-GSEWI----FRS-CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp GS-CSGGG----GSS-CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred hh-hHHHH----Hhh-cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 21 11111 110 01122345599999999999999999999999999764
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=280.72 Aligned_cols=193 Identities=12% Similarity=0.071 Sum_probs=141.0
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|....|+||+++++ ++.... ..|+|||| .|++|.+++.. ....+++..++.|+.||+.||.|||++||||
T Consensus 120 ~l~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivH 195 (365)
T 3e7e_A 120 RLKPSMQHMFMKFYS-AHLFQN---GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIH 195 (365)
T ss_dssp HSCGGGGGGBCCEEE-EEECSS---CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred Hhhhhhhhhhhhhhe-eeecCC---CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 344445999999999 444443 57999999 89999999953 3456999999999999999999999999999
Q ss_pred ccCCCCcEEEcc-----------CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 145 HNVRPSCFVMSS-----------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 145 rDLKP~NILl~~-----------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|||||+|||++. ++.+||+|||++........
T Consensus 196 rDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~------------------------------------- 238 (365)
T 3e7e_A 196 GDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK------------------------------------- 238 (365)
T ss_dssp CCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT-------------------------------------
T ss_pred CCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC-------------------------------------
Confidence 999999999998 89999999988743210000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+||+.|+|||++.+..++.++|
T Consensus 239 ---------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 267 (365)
T 3e7e_A 239 ---------------------------------------------------GTIFTAKCETSGFQCVEMLSNKPWNYQID 267 (365)
T ss_dssp ---------------------------------------------------TEEECCSSCTTSCCCHHHHTTCCBSTHHH
T ss_pred ---------------------------------------------------CceeeeecCCCCCCChHHhcCCCCCcccc
Confidence 00001247899999999999999999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||....... ..+ ...++.. ...+...+++..||..+|.+|++..+.+.
T Consensus 268 iwslG~il~elltg~~pf~~~~~~~---~~~-~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 268 YFGVAATVYCMLFGTYMKVKNEGGE---CKP-EGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEETTE---EEE-CSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCCCCc---eee-chhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 9999999999999 443221110 000 1111111 11123348999999999999965444443
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=266.55 Aligned_cols=190 Identities=16% Similarity=0.225 Sum_probs=139.8
Q ss_pred hhhhhc-ccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 66 SDGVEL-THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 66 ~e~~~L-~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+|..++ ..++||||+++++.+.........+|+|||| .|++|.+++... ...+++.+++.++.||+.||.|||++||
T Consensus 59 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 138 (299)
T 3m2w_A 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138 (299)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 455555 5579999999999443322223368999999 788999999543 3469999999999999999999999999
Q ss_pred eeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 143 VVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++. ++.++|+|||++...
T Consensus 139 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~------------------------------------------------ 170 (299)
T 3m2w_A 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKET------------------------------------------------ 170 (299)
T ss_dssp ECCCCSGGGEEESSSSTTCCEEECCCTTCEEC------------------------------------------------
T ss_pred ccCCCCHHHEEEecCCCCCcEEEecccccccc------------------------------------------------
Confidence 99999999999997 788999888766110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.+..++.++|||||||
T Consensus 171 ----------------------------------------------------------------~~~~~~~~~DiwslG~ 186 (299)
T 3m2w_A 171 ----------------------------------------------------------------TGEKYDKSCDMWSLGV 186 (299)
T ss_dssp ----------------------------------------------------------------TTCGGGGHHHHHHHHH
T ss_pred ----------------------------------------------------------------ccccCCchhhHHHHHH
Confidence 0123678999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC------CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHR------VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~------~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||++ ||....... ....+... .++......+ +...+||.+||+.||.+|||+.|+|+||||....
T Consensus 187 il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 187 IMYILLCGYPPFYSNHGLA-ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HHHHHHHSSCSCCC--------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HHHHHHHCCCCCCCCcchh-hhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 9999999 564432221 11111111 1121111233 4455999999999999999999999999998763
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-29 Score=298.68 Aligned_cols=198 Identities=18% Similarity=0.209 Sum_probs=148.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCC-cEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAID-PFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~-~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|||||++++.+........ .+|+|||| .|++|.+++.. .+++.+++.|+.||+.||.|||++
T Consensus 125 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~ 201 (681)
T 2pzi_A 125 MAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI 201 (681)
T ss_dssp HHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 44578889999999999999994443332222 26999999 89999998744 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.+ .+||+|||+++..+..
T Consensus 202 giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~---------------------------------------------- 234 (681)
T 2pzi_A 202 GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF---------------------------------------------- 234 (681)
T ss_dssp TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC----------------------------------------------
T ss_pred CCeecccChHHeEEeCC-cEEEEecccchhcccC----------------------------------------------
Confidence 99999999999999874 8999988887322100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....||+.|+|||++.+. ++.++|||||||+
T Consensus 235 ------------------------------------------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~ 265 (681)
T 2pzi_A 235 ------------------------------------------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRT 265 (681)
T ss_dssp ------------------------------------------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHH
T ss_pred ------------------------------------------------CccCCCccccCHHHHcCC-CCCceehhhhHHH
Confidence 014689999999999776 4899999999999
Q ss_pred hhhccccCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 301 LFELFCPFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 301 l~eLltpf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
||+|++++.+.... ....... .......+...+||.+||++||.+||+..+.+.|+|+.
T Consensus 266 l~~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 266 LAALTLDLPTRNGR------YVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHHSCCCEETTE------ECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHhCCCCCccc------ccccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 99999965443211 0111111 11112234556999999999999999988888877753
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-29 Score=270.06 Aligned_cols=169 Identities=12% Similarity=0.093 Sum_probs=123.9
Q ss_pred CcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCcEEEccCC-------------
Q 004989 94 DPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH-SQGIVVHNVRPSCFVMSSFN------------- 158 (720)
Q Consensus 94 ~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH-s~gIvHrDLKP~NILl~~~~------------- 158 (720)
..+|+|||| .+++|.+.+.+ ..+++.+++.|+.||+.||.||| ++|||||||||+|||++.++
T Consensus 135 ~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~ 212 (336)
T 2vuw_A 135 DQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSS 212 (336)
T ss_dssp TCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEE
T ss_pred CeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccc
Confidence 478999999 78876666633 34899999999999999999999 99999999999999999877
Q ss_pred -------ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCc
Q 004989 159 -------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 159 -------~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
.+||+|||+++.. ..
T Consensus 213 ~~~~~~~~vkL~DFG~a~~~---------------------------------------------~~------------- 234 (336)
T 2vuw_A 213 TIPSCGLQVSIIDYTLSRLE---------------------------------------------RD------------- 234 (336)
T ss_dssp EEECTTEEEEECCCTTCBEE---------------------------------------------ET-------------
T ss_pred cccCCCceEEEeeccccEec---------------------------------------------CC-------------
Confidence 6777666655211 00
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch-hhhccccCCC
Q 004989 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL-LFELFCPFST 310 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl-l~eLltpf~~ 310 (720)
...+||+.|+|||++.+.. +.++||||||++ .+++++++.+
T Consensus 235 -------------------------------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p 276 (336)
T 2vuw_A 235 -------------------------------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHP 276 (336)
T ss_dssp -------------------------------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCT
T ss_pred -------------------------------------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCC
Confidence 0137899999999999876 899999998777 7778775555
Q ss_pred CchH---HHHHHHhh-cCC----CCccccccC-chHHHHHHHcCCCCCCCCCChHHHH-cCcccC
Q 004989 311 GEEK---TRTMSSLR-HRV----LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELL-QSEFLN 365 (720)
Q Consensus 311 ~~~~---~~~~~~l~-~~~----~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL-~hp~~~ 365 (720)
.... ......+. ... .++.....+ +...+||.+||++| |+.|+| +||||+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 277 YSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred CcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 4331 11222222 111 112222223 34459999999977 999999 999995
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.8e-29 Score=279.52 Aligned_cols=210 Identities=18% Similarity=0.180 Sum_probs=154.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++..+.|++++..+..+.... ...|+||||.+++|.+++......+++.+++.|+.||+.||.|||++||||
T Consensus 50 ~~E~~il~~L~~~~~i~~i~~~~~~~---~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvH 126 (483)
T 3sv0_A 50 LYESKIYRILQGGTGIPNVRWFGVEG---DYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 126 (483)
T ss_dssp HHHHHHHHHTTTSTTCCCEEEEEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHhcCCCCCCeEEEEEeeC---CEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 36667888888877666665344333 367999999999999999755566999999999999999999999999999
Q ss_pred ccCCCCcEEE---ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 145 HNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 145 rDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|||||+|||| +.++.+||+|||++........... .
T Consensus 127 rDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~------------------------------~----------- 165 (483)
T 3sv0_A 127 RDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH------------------------------I----------- 165 (483)
T ss_dssp CCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C-----------
T ss_pred cccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc------------------------------c-----------
Confidence 9999999999 5889999999998854322110000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ........||+.|+|||++.+..++.++|||||||+|
T Consensus 166 -----------------------------------------~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil 203 (483)
T 3sv0_A 166 -----------------------------------------P-YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVL 203 (483)
T ss_dssp -----------------------------------------C-CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------c-cccccccCCCccccCHHHhcCCCCChHHHHHHHHHHH
Confidence 0 0000125789999999999999999999999999999
Q ss_pred hhccc---cCCCCch--HHHHHHHhhcC---CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEE--KTRTMSSLRHR---VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~--~~~~~~~l~~~---~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ....+..+... ...+.+...+|. ..+|+.+||+.+|.+||++.+|++
T Consensus 204 ~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 204 MYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999 6765322 22222222211 111222234444 459999999999999999998875
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-27 Score=251.64 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=132.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.++++. + ....++..|+.||+.||.|||++|
T Consensus 77 ~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~-~--~~~~~~~~i~~ql~~aL~~lH~~g 149 (286)
T 3uqc_A 77 ETLSRTLRLSRIDKPGVARVLD-VVHTRA---GGLVVAEWIRGGSLQEVADT-S--PSPVGAIRAMQSLAAAADAAHRAG 149 (286)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCCEEEHHHHHTT-C--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCcceeeE-EEEECC---cEEEEEEecCCCCHHHHHhc-C--CChHHHHHHHHHHHHHHHHHHHCC
Confidence 4457788899999999999999 554443 58999999 88999999943 2 466688999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|.+||+
T Consensus 150 ivH~Dikp~NIll~~~g~~kl~---------------------------------------------------------- 171 (286)
T 3uqc_A 150 VALSIDHPSRVRVSIDGDVVLA---------------------------------------------------------- 171 (286)
T ss_dssp CCCCCCSGGGEEEETTSCEEEC----------------------------------------------------------
T ss_pred CccCCCCcccEEEcCCCCEEEE----------------------------------------------------------
Confidence 9999999999999999999883
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
++.|++| ++.++|||||||++
T Consensus 172 ----------------------------------------------------~~~~~~~-------~~~~~Di~slG~il 192 (286)
T 3uqc_A 172 ----------------------------------------------------YPATMPD-------ANPQDDIRGIGASL 192 (286)
T ss_dssp ----------------------------------------------------SCCCCTT-------CCHHHHHHHHHHHH
T ss_pred ----------------------------------------------------eccccCC-------CCchhHHHHHHHHH
Confidence 2234443 78999999999999
Q ss_pred hhccc---cCCCCchHHHH---HHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEKTRT---MSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~---~~~l~~~~~p-~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||......... ...+.....+ ..+....|. ..+||.+||+.||.+| |+.|+++
T Consensus 193 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 193 YALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 99999 77764332100 0111111111 122233444 4599999999999999 9999986
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=258.15 Aligned_cols=145 Identities=20% Similarity=0.132 Sum_probs=104.6
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|+.+|.++ .|+||+++++ +++++. .+|||||| .|++|.++|.+.+ ++++. .|+.||+.||+|||++|
T Consensus 288 ~~~E~~~l~~~~~~~~i~~~~~-~~ed~~---~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~G 359 (569)
T 4azs_A 288 LHNEIKFLTQPPAGFDAPAVLA-HGENAQ---SGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQG 359 (569)
T ss_dssp HHHHHHHHHSCCTTCCCCCEEE-EEECSS---EEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCeeEEEE-EEEECC---EEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHCC
Confidence 33788899998 7999999999 666664 67999999 9999999996654 47664 48899999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.+|++||+|||+++....+..
T Consensus 360 IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~--------------------------------------------- 394 (569)
T 4azs_A 360 FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS--------------------------------------------- 394 (569)
T ss_dssp CEESCCCGGGEEECTTSCEEECCCTTEESCC---C---------------------------------------------
T ss_pred ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc---------------------------------------------
Confidence 99999999999999999999999888754321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|||||++.+. +..++|+|++|+++
T Consensus 395 ---------------------------------------------~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~ 428 (569)
T 4azs_A 395 ---------------------------------------------WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHP 428 (569)
T ss_dssp ---------------------------------------------CSHHHHHHHHHHHHHHC------------------
T ss_pred ---------------------------------------------cccCceechhhccHHHhCCC-CCCcccccccccch
Confidence 00125799999999999875 67889999999999
Q ss_pred hhcccc
Q 004989 302 FELFCP 307 (720)
Q Consensus 302 ~eLltp 307 (720)
|+|.++
T Consensus 429 ~~l~~~ 434 (569)
T 4azs_A 429 FNLPQP 434 (569)
T ss_dssp CCCCTT
T ss_pred hhhccc
Confidence 999873
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.9e-19 Score=203.13 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=78.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++.. ++.... ..|+|||| .|++|.+++.. ++.|+.||+.||.|||++||
T Consensus 386 ~~~E~~il~~l~h~nIv~~~~-~~~~~~---~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gI 452 (540)
T 3en9_A 386 TAREARYLALVKDFGIPAPYI-FDVDLD---NKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDV 452 (540)
T ss_dssp HHHHHHHHHHGGGGTCCCCCE-EEEETT---TTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCcCceEE-EEEeCC---ccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcC
Confidence 458889999999999994433 112222 34999999 78999999954 56899999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCC
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
+||||||+|||++. .+||+|||+++..
T Consensus 453 iHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 453 IHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp ECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred ccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 99999999999998 9999999988543
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=7.3e-15 Score=158.07 Aligned_cols=127 Identities=9% Similarity=0.030 Sum_probs=99.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|...+-+.+..++. .+.+|.+.|.+|+|+|||++|||||.|++|+|||+.+. .++..+. |...|
T Consensus 102 dg~v~lWd~~~~~~~~~~~~-~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~--------~~~~~~~~h~~~V 172 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKF-CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ--------VVLSSYRAHAAQV 172 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEE-EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEeccCCCceeEeec-cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEcCcCCce
Confidence 44455555544333333321 24478999999999999999999999999999999876 3444444 57789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCC-ceEEEecCccceE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKL-LIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------v~~v~~~~~-~~~~~~~~~~~~~ 716 (720)
.+++|+|++..+||||+.||+|+|||+++++++.+ +.+++|++. ..++++|+.|...
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV 239 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence 99999998888999999999999999999998875 789999985 5678888887643
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.6e-14 Score=153.59 Aligned_cols=122 Identities=14% Similarity=0.132 Sum_probs=101.7
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..+++...+.+++.+++ +|...|.+++|+|||++|||||.|++|+|||+++. .++..+. |...|
T Consensus 185 dg~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--------~~~~~~~~h~~~v 251 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLE-----GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--------NLAGTLSGHASWV 251 (321)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC--------CEEEEECCCSSCE
T ss_pred CCeEEEEECCCCcEEEEEc-----ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc--------ceeEEEcCCCCce
Confidence 3455666666667777664 45889999999999999999999999999998765 2333343 46779
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.+++|+|+ +.+||||+.||+|+|||+.+++++.+ |++++|++.+..+++++.|...
T Consensus 252 ~~~~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i 314 (321)
T 3ow8_A 252 LNVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI 314 (321)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEEECCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 99999996 56999999999999999999999987 8999999999999999988643
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-14 Score=151.20 Aligned_cols=104 Identities=10% Similarity=0.003 Sum_probs=90.7
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.+|.+.|.+|+|+|||++||||+.|++|+|||+.+. .++..+. +...|.+++|+|+ +++||||+.|++|+
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~--------~~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ--------VEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRIR 80 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--------ceeEEeeccCCcEEEEEEeCC-CCEEEEECCCCEEE
Confidence 456899999999999999999999999999998775 2333443 4667999999995 57999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.+|+++.+ |++++|+|.+..+++|+.|..-
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v 121 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTV 121 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeE
Confidence 999999999876 8999999999999999998644
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-14 Score=154.02 Aligned_cols=127 Identities=9% Similarity=0.070 Sum_probs=101.9
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe---
Q 004989 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--- 653 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 653 (720)
.-.++..++|...+.+++.++. +|.+.|.+++|+|++. +|||||.|++|+|||+++. .++..+
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--------~~~~~~~~~ 211 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSYR-----AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP--------KPASQIGCS 211 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS--------SCEEECC--
T ss_pred EeCCCeEEEEECCCCcEEEEEc-----CcCCceEEEEecCCCCCceeeecccccccccccccc--------ceeeeeecc
Confidence 3445567777777777777764 4689999999999995 7999999999999999876 233332
Q ss_pred cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceEE
Q 004989 654 ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVKY 717 (720)
Q Consensus 654 ~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~~ 717 (720)
.+...+.+++|+|+++++||+|+.||+|+|||+++++++.+ |++++|+|.+ .++++|+.|...+
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLA 283 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEE
Confidence 22456999999998889999999999999999999999886 8999999987 5789999886544
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.54 E-value=4.1e-14 Score=148.22 Aligned_cols=108 Identities=13% Similarity=0.161 Sum_probs=87.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|||++|||||.|++|+|||+.... ..++..+ .|...|.+|+|+|. .+++||||+.||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC------cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 45789999999999999999999999999999986431 1233344 45778999999864 4679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004989 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.+ |++++|+|. +..+++|+.|...
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v 125 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKV 125 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcE
Confidence 9999999874 3332 899999997 7788888887643
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.54 E-value=5.1e-14 Score=150.53 Aligned_cols=113 Identities=10% Similarity=0.088 Sum_probs=91.9
Q ss_pred CCCCCCCCeEEEEE-----CC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEE
Q 004989 602 DLLNSSNLVCSLSF-----DR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 602 ~~~~~~~~V~sv~f-----~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS 674 (720)
.|.+|.+.|.+|+| ++ ||.+|||||.|++|+|||+....... ....+...+ .|...|.+|+|+|+ +.+|||
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~-~~~~~~~~l~~h~~~V~~~~~~~~-~~~l~s 93 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNG-YFGIPHKALTGHNHFVSDLALSQE-NCFAIS 93 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSS-BSEEEEEEECCCSSCEEEEEECSS-TTEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccc-ccccccchhccCCCceEEEEECCC-CCEEEE
Confidence 35577999999999 76 99999999999999999986532111 011244444 45678999999995 569999
Q ss_pred EeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 675 SNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 675 ~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+.|++|+|||+++++++.+ |++++|+|.+..+++|+.|...
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREI 142 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCE
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEE
Confidence 99999999999999998876 8999999999999999988643
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.53 E-value=4.4e-14 Score=149.63 Aligned_cols=110 Identities=12% Similarity=0.117 Sum_probs=91.7
Q ss_pred CCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 602 DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.|.+|.+.|.+|+|+|++ .+|||||.|++|+|||+..... ....|+..+. |...|.+++|+|+ +.+||||+.|+
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~ 87 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---KFGVPVRSFKGHSHIVQDCTLTAD-GAYALSASWDK 87 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---EEEEEEEEEECCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---cccccceEEeCCcccEEEEEECCC-CCEEEEEeCCC
Confidence 356779999999999976 8999999999999999754311 1113455554 5678999999995 56999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|||+.+|+++.+ |++++|++.+..+++|+.|..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 999999999998876 899999999999999999864
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.52 E-value=3.6e-14 Score=149.13 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=102.0
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCC
Q 004989 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASR 656 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 656 (720)
.-.++..++|.+.+.+.+..+. +|...|.+++|+|+|++|||||.|++|+|||+.++ .++..+ .|.
T Consensus 31 ~~~dg~v~lWd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~--------~~~~~~~~h~ 97 (304)
T 2ynn_A 31 TLYSGRVELWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHP 97 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCS
T ss_pred EcCCCcEEEEECCCCceeEEee-----ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC--------cEEEEEeCCC
Confidence 3345667888888877777775 34789999999999999999999999999998876 233333 457
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EEEEeecC-CceEEEecCccceE
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LYCIVLNK-LLIIFRYGMFQEVK 716 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------v~~v~~~~-~~~~~~~~~~~~~~ 716 (720)
..|.+|+|+|+ +.+||||+.||+|+|||++++..+.. |+|++|+| ....+++|+.|...
T Consensus 98 ~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 98 DYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp SCEEEEEECSS-SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred CcEEEEEEcCC-CCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 78999999996 56999999999999999998855432 89999999 57889999988643
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.6e-15 Score=158.95 Aligned_cols=89 Identities=15% Similarity=0.036 Sum_probs=72.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++ | +++++ ++..+ ..|+|||| .|++|.+ +.. .+...++.||+.||.|||++|
T Consensus 150 ~~~~E~~~l~~l~--~-~~v~~-~~~~~----~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~g 213 (282)
T 1zar_A 150 SARNEFRALQKLQ--G-LAVPK-VYAWE----GNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRG 213 (282)
T ss_dssp HHHHHHHHHHHTT--T-SSSCC-EEEEE----TTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcc--C-CCcCe-EEecc----ceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCC
Confidence 3458888999998 5 66666 44332 35999999 7889988 521 234579999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
|+||||||+|||++ ++.+||+|||++
T Consensus 214 iiHrDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 214 IVHGDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp EECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred CEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence 99999999999999 999999988877
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=3.1e-14 Score=156.53 Aligned_cols=122 Identities=15% Similarity=0.178 Sum_probs=100.5
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~ 658 (720)
.++..++|.+.+.+.+.++ .+|.+.|.+|+|+|+|++|||||.|++|+|||+.+. .++..+ .|...
T Consensus 128 ~Dg~i~vwd~~~~~~~~~l-----~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~--------~~~~~~~~h~~~ 194 (410)
T 1vyh_C 128 EDATIKVWDYETGDFERTL-----KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--------ECIRTMHGHDHN 194 (410)
T ss_dssp SSSCEEEEETTTCCCCEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS--------CEEECCCCCSSC
T ss_pred CCCeEEEEECCCCcEEEEE-----eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--------ceeEEEcCCCCC
Confidence 3445566666665555555 456899999999999999999999999999998765 233333 34668
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|++|+|+|+ +++|+||+.|++|++||+++|+++.+ |.+++|++.+..+++|+.|..
T Consensus 195 V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 195 VSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp EEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 999999995 56999999999999999999999886 789999999999999998854
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.6e-14 Score=151.19 Aligned_cols=109 Identities=10% Similarity=0.150 Sum_probs=85.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|||++|||||.|++|+|||+.+... .++..+ .|...|.+|+|+|+ .+++||||+.|++
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~------~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ------ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE------EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc------EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 457899999999999999999999999999999865410 123333 45778999999863 4679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceEE
Q 004989 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
|+|||+++++ .+.+ |++++|+|. +.++++|+.|...+
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 9999999884 4433 789999997 78899999886544
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=5.9e-14 Score=154.28 Aligned_cols=106 Identities=9% Similarity=0.032 Sum_probs=92.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+++|+|++.+|||||.|++|+|||+.++. .+..+ .|...|.+|+|+|+ +.+||||+.||+|
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--------~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D~~i 174 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--------FERTLKGHTDSVQDISFDHS-GKLLASCSADMTI 174 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--------CCEEECCCSSCEEEEEECTT-SSEEEEEETTSCC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEeccCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 45679999999999999999999999999999988762 23333 34678999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|||+.+++++.+ |+|++|+|.+..+.+|+.|...+
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 9999999999876 89999999999999999987543
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.3e-14 Score=150.25 Aligned_cols=125 Identities=10% Similarity=0.078 Sum_probs=99.1
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
+..++|...+.+.+..+. +..|...|.+|+|+|++ .+||+|+.|++|+|||+++. .++..+. +...|
T Consensus 204 g~v~~wd~~~~~~~~~~~---~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~--------~~~~~~~~~~~~v 272 (357)
T 4g56_B 204 GRILLWDTRKPKPATRID---FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP--------DSAQTSAVHSQNI 272 (357)
T ss_dssp SCEEECCTTSSSCBCBCC---CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG--------GGCEEECCCSSCE
T ss_pred CceEEEECCCCceeeeee---eccccccccchhhhhcccceEEEeecccceeEEECCCC--------cEeEEEeccceeE
Confidence 344555554444444332 34567889999999985 68999999999999998876 2344443 46789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecC-CceEEEecCccceEE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNK-LLIIFRYGMFQEVKY 717 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~-~~~~~~~~~~~~~~~ 717 (720)
++|+|+|+++.+||||+.||+|+|||+.+++++.. |++|+|+| .+..+++|+.|...+
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 99999998878999999999999999999999886 99999998 688999999986543
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.8e-13 Score=146.09 Aligned_cols=121 Identities=12% Similarity=0.152 Sum_probs=99.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|...+.+.+.++ .+|...|.+++|+|+|.+||||+.|++|+|||+++. .++..+. |...|
T Consensus 163 d~~i~~wd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~--------~~~~~~~~h~~~v 229 (340)
T 1got_B 163 DTTCALWDIETGQQTTTF-----TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--------MCRQTFTGHESDI 229 (340)
T ss_dssp TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------SEEEEECCCSSCE
T ss_pred CCcEEEEECCCCcEEEEE-----cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--------eeEEEEcCCcCCE
Confidence 445566666666666555 456899999999999999999999999999998765 2344443 46789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccce
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+|+|+|+ +++||||+.||+|+|||+++++.+.+ |++++|+|.+..+.+|+-|..
T Consensus 230 ~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~ 293 (340)
T 1got_B 230 NAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293 (340)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEcCC-CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe
Confidence 99999995 56999999999999999999988765 789999999999999988754
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=147.20 Aligned_cols=123 Identities=10% Similarity=0.119 Sum_probs=97.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CC
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~ 657 (720)
++..++|...+.+.+.+ +.+|...|.+|+|+|+|.+|||||.|++|+|||+++.. ++..+.+ ..
T Consensus 205 d~~v~~wd~~~~~~~~~-----~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~--------~~~~~~~~~~~~ 271 (340)
T 1got_B 205 DASAKLWDVREGMCRQT-----FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ--------ELMTYSHDNIIC 271 (340)
T ss_dssp TSCEEEEETTTCSEEEE-----ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCS
T ss_pred CCcEEEEECCCCeeEEE-----EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc--------EEEEEccCCccc
Confidence 33444554444444444 45678999999999999999999999999999987651 2333333 24
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|.+++|+|+ +.+||+|+.||+|+|||+.+++.+.+ |+|++|++.+..+++|+.|...+
T Consensus 272 ~v~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 272 GITSVSFSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp CEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred ceEEEEECCC-CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 6999999995 56999999999999999999998876 89999999999999999997544
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=156.81 Aligned_cols=104 Identities=14% Similarity=0.131 Sum_probs=89.0
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
.|.||++.|++|+|+|||++|||||.|++|+|||.. . .++..+ .|...|.+|+|+|+ +.+|||++.|++
T Consensus 11 ~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~-~--------~~~~~l~gh~~~V~~l~fspd-g~~las~~~d~~ 80 (577)
T 2ymu_A 11 RLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G--------QLLQTLTGHSSSVWGVAFSPD-GQTIASASDDKT 80 (577)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S--------CEEEEEECCSSCEEEEEECTT-SSEEEEEETTSC
T ss_pred EECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC-C--------CEEEEEeCCCCCEEEEEECCC-CCEEEEEeCCCE
Confidence 478999999999999999999999999999999953 2 134444 35778999999995 569999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+ +|+++.+ |++++|+|.+..+++++.|...
T Consensus 81 i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~ 122 (577)
T 2ymu_A 81 VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 122 (577)
T ss_dssp EEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCce
Confidence 999996 6777776 8999999999999999887654
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.49 E-value=4e-14 Score=154.75 Aligned_cols=109 Identities=9% Similarity=-0.050 Sum_probs=88.7
Q ss_pred CCCCCCCCCeEEEEECC--------CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEE
Q 004989 601 GDLLNSSNLVCSLSFDR--------DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~--------dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~l 672 (720)
+.+.||.+.|++|+|+| ||++|||||.|++|||||+.+.. .......+++.|.+|+|+|+++++|
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-------~~~~~~~~~~~v~~v~~~p~~~~~l 202 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-------PILAGYPLSSPGISVQFRPSNPNQL 202 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-------EEEEEEECSSCEEEEEEETTEEEEE
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-------eeeeecCCCCCcEEEEECCCCCceE
Confidence 56789999999999998 99999999999999999986541 2234456788999999999877899
Q ss_pred EEEeCCCcEEEEECCCCcEEEE--------------------------------EEEEeec-CCceEEEecCccceE
Q 004989 673 ASSNFEGVVQVGQVLHLIYFSA--------------------------------LYCIVLN-KLLIIFRYGMFQEVK 716 (720)
Q Consensus 673 aS~s~D~~v~lWD~~tg~~~~~--------------------------------v~~v~~~-~~~~~~~~~~~~~~~ 716 (720)
|||+.||+|+|||+++++...+ +.++.|+ +.+..+.+++.|...
T Consensus 203 ~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i 279 (393)
T 4gq1_A 203 IVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAW 279 (393)
T ss_dssp EEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEE
T ss_pred EecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCE
Confidence 9999999999999999876543 4567775 788888888888643
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.9e-13 Score=146.44 Aligned_cols=116 Identities=10% Similarity=0.162 Sum_probs=90.3
Q ss_pred ceEEeeeeccCCCCCCCC-CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCC
Q 004989 591 KLRVKADLNQGDLLNSSN-LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYI 668 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~-~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~ 668 (720)
.++.+.+|+ +|.. .|.+|+|+|||++|||||.|++|+|||+...... +.... ..|...|.+|+|+|+
T Consensus 4 ~~~~~~~~~-----~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~-----~~~~~~~~h~~~v~~~~~sp~- 72 (345)
T 3fm0_A 4 SLVLLGRVP-----AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI-----CKSVLSEGHQRTVRKVAWSPC- 72 (345)
T ss_dssp CEEEEEEEC-----CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE-----EEEEECSSCSSCEEEEEECTT-
T ss_pred cEEEeeeec-----CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce-----eeeeeccccCCcEEEEEECCC-
Confidence 345566665 3455 8999999999999999999999999997654100 01111 235678999999995
Q ss_pred CCEEEEEeCCCcEEEEECCCCc--EEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 669 KSQIASSNFEGVVQVGQVLHLI--YFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWD~~tg~--~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+++||||+.|++|+|||+.++. ++.+ |++++|+|.+..+++|+.|...+
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~ 130 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVW 130 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEE
Confidence 5799999999999999998874 4443 89999999999999999886443
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.8e-13 Score=144.17 Aligned_cols=110 Identities=7% Similarity=0.163 Sum_probs=82.4
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+|+|+|+|++|||||.|++|+|||........... .++..+ .|...|.+|+|+|+ +++||||+.|++|+|
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~i 133 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEM-DLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWI 133 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCC-EEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccc-eeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEE
Confidence 378999999999999999999999999999985431110111 133333 35778999999996 569999999999999
Q ss_pred EECCC-C---cEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 684 GQVLH-L---IYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 684 WD~~t-g---~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+.+ + +++.. |++++|+|.+..+++|+.|...
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i 177 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTV 177 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 99943 2 44443 8999999999999999998643
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.48 E-value=3.6e-13 Score=141.22 Aligned_cols=104 Identities=18% Similarity=0.290 Sum_probs=89.8
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+++|+|||++||||+.|++|+|||..+.. ....+ .|...|.+++|+|+ +++||+|+.||+|+
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--------~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------FEKTISGHKLGISDVAWSSD-SNLLVSASDDKTLK 90 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--------cchhhccCCCceEEEEEcCC-CCEEEEECCCCEEE
Confidence 4668999999999999999999999999999986651 22333 34678999999995 57999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.+++++.. |+|++|++.+..+.+|+.|...
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i 131 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 131 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 999999998876 8899999999999999988643
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.4e-13 Score=144.34 Aligned_cols=103 Identities=11% Similarity=0.197 Sum_probs=90.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.|...|.+++|+|||++||+|+.|++|+|||+.+. .++..+. +...|.+|+|+|+ +.+||||+.||+|+|
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~spd-~~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG--------KLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKI 232 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCCCEEEECTT-SCEEEEECTTSCEEE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC--------cEEEEEcccCCceeEEEEcCC-CCEEEEEcCCCeEEE
Confidence 45788999999999999999999999999998775 2444444 4667999999995 569999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 684 WD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+++++++.+ |++++|+|.+..+++|+.|...
T Consensus 233 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v 272 (321)
T 3ow8_A 233 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 272 (321)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 99999998876 8999999999999999998643
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.6e-13 Score=157.11 Aligned_cols=131 Identities=13% Similarity=0.143 Sum_probs=98.1
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
+...++|.....+.+.++ .+|...|.+|+|+|||++|||||.|++|+|||..++.....-....+....|...|.
T Consensus 169 D~~v~lwd~~~~~~~~~l-----~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTF-----GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp TSCEEEEETTTBEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred CCeEEEEECCCCeEeeee-----ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence 344556665556666555 456899999999999999999999999999998765210000000001114677899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------------------------------------
Q 004989 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------------------------------------------- 694 (720)
Q Consensus 661 ~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------------------------------------------- 694 (720)
+|+|+|+ +.+|||++.|++|+|||+.+++++.+
T Consensus 244 ~v~~spd-g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g 322 (611)
T 1nr0_A 244 GLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG 322 (611)
T ss_dssp EEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred EEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC
Confidence 9999995 56999999999999999999876531
Q ss_pred ----EEEEeecCCceEEEecCccceEE
Q 004989 695 ----LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 695 ----v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++++|+|.+..+.+|+.|...+
T Consensus 323 h~~~v~~l~~spdg~~l~s~s~D~~v~ 349 (611)
T 1nr0_A 323 HNKAITALSSSADGKTLFSADAEGHIN 349 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEE
Confidence 67899999999999999886543
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.4e-13 Score=144.68 Aligned_cols=108 Identities=15% Similarity=0.238 Sum_probs=83.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+|+|+|||++|||||.|++|+|||+...... ..++..+ .|...|.+|+|+|+ +.+||||+.|++|
T Consensus 103 ~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~----~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i 177 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE----YECISVLQEHSQDVKHVIWHPS-EALLASSSYDDTV 177 (330)
T ss_dssp EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC----CEEEEEECCCSSCEEEEEECSS-SSEEEEEETTSCE
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC----eEEEEEeccCCCceEEEEECCC-CCEEEEEcCCCeE
Confidence 3567899999999999999999999999999998532110 1233334 34678999999995 5699999999999
Q ss_pred EEEECCCC--cEEEE-------EEEEeecCC--ceEEEecCccce
Q 004989 682 QVGQVLHL--IYFSA-------LYCIVLNKL--LIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg--~~~~~-------v~~v~~~~~--~~~~~~~~~~~~ 715 (720)
+|||+.++ +++.+ |++++|++. +..+.+|+.|..
T Consensus 178 ~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 178 RIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred EEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 99999887 55554 899999998 678889888754
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=3.9e-13 Score=146.65 Aligned_cols=124 Identities=10% Similarity=0.145 Sum_probs=103.1
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
++..++|...+.+++..++ +|...|.+++|+|+|++|+|||.|++|+|||+++. .++..+.+...+.
T Consensus 144 d~~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~--------~~~~~~~~~~~v~ 210 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQ-----GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG--------QCSLTLSIEDGVT 210 (393)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEE
T ss_pred CCeEEEEECCCCcEEEEEc-----cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC--------eeEEEEEcCCCcE
Confidence 4456666666666666654 56899999999999999999999999999998875 2344455667899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceEE
Q 004989 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 661 ~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+++|+|.++.+||+|+.||+|+|||+++++.+.. |++++|++.+..+++|+.|...+
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 281 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 9999997778999999999999999999987653 78999999999999999986443
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.9e-13 Score=144.71 Aligned_cols=123 Identities=12% Similarity=0.059 Sum_probs=98.3
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CC
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~ 657 (720)
++..++|...+.+.+..+ .+|.+.|.+|+|+|+|.+|||||.|++|+|||++... ++..+.. ..
T Consensus 219 Dg~v~~wd~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--------~~~~~~~~~~~~ 285 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCVQAF-----ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR--------EVAIYSKESIIF 285 (354)
T ss_dssp TSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCS
T ss_pred CCeEEEEECCCCcEEEEe-----cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEcCCCccc
Confidence 344455555555555444 4568999999999999999999999999999987641 2222222 33
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++++|+|+ +.+||+|+.|++|+|||+.+|+.+.. |++++|+|.+..+++|+.|...+
T Consensus 286 ~~~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 286 GASSVDFSLS-GRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp CEEEEEECTT-SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred ceeEEEEeCC-CCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 6899999995 56999999999999999999998876 89999999999999999997544
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-13 Score=152.34 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=86.8
Q ss_pred CCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
+|...|+||+|+| ++.+||||+.||+|+|||+.+... ...+....|.+.|++|+|+|.++++|+|||.||+|+|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-----PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-----CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 4578899999999 567999999999999999876521 1111223467889999999987889999999999999
Q ss_pred EECCCCcEEEE---------EEEEeecCCceEEEecCccceEE
Q 004989 684 GQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 684 WD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
||++++..... +.+++|++.+.++++|+.|...+
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVI 234 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEe
Confidence 99988754332 57899999999999998876443
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.46 E-value=4.8e-13 Score=140.25 Aligned_cols=122 Identities=11% Similarity=0.151 Sum_probs=98.8
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|.....+....+ .+|...|.+++|+|||++||+|+.|++|+|||+.+. .++..+. |...|
T Consensus 44 dg~i~iw~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~~~~v 110 (312)
T 4ery_A 44 DKLIKIWGAYDGKFEKTI-----SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--------KCLKTLKGHSNYV 110 (312)
T ss_dssp TSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCeEEEEeCCCcccchhh-----ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC--------cEEEEEcCCCCCE
Confidence 334455555444444444 456889999999999999999999999999998765 2344443 46779
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.+++|+|+ +++||||+.||+|+|||+++++++.. |.+++|++.+..+.+|+.|...
T Consensus 111 ~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 111 FCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp EEEEECSS-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEEcCC-CCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 99999995 56999999999999999999998876 8999999999999999988643
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.4e-13 Score=143.55 Aligned_cols=106 Identities=12% Similarity=0.127 Sum_probs=87.6
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+|+|+|||++|||||.|++|+|||...... .++..+ .|...|.+|+|+|+ +++||||+.|++|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~------~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~ 130 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF------ECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVW 130 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E------EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe------EEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEE
Confidence 47899999999999999999999999999999765411 123334 35678999999995 57999999999999
Q ss_pred EEECCCCcE---EEE-------EEEEeecCCceEEEecCccceE
Q 004989 683 VGQVLHLIY---FSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWD~~tg~~---~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.++.. +.. |.+++|+|.+.++++|+.|...
T Consensus 131 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i 174 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174 (345)
T ss_dssp EEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCE
T ss_pred EEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcE
Confidence 999988743 332 8999999999999999988643
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.5e-13 Score=144.47 Aligned_cols=106 Identities=9% Similarity=0.005 Sum_probs=77.6
Q ss_pred CCCCCeEEEEECC---CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CC---CCEEEEE--------------
Q 004989 605 NSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SR---SKLSSIC-------------- 663 (720)
Q Consensus 605 ~~~~~V~sv~f~~---dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~---~~i~~l~-------------- 663 (720)
+|+..|+.++|++ ||++|||||.|++|||||+.++. .+..+. ++ ..+.+++
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~ 247 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHP 247 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--------EEEEEECCC---CCCEEEEEEETTEEEEEEC--
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccC
Confidence 4588889999998 77999999999999999998762 111111 00 0111111
Q ss_pred -----------------EecCC-------------C------------CEEEEEeCCCcEEEEECCCCcEEEE-------
Q 004989 664 -----------------WNSYI-------------K------------SQIASSNFEGVVQVGQVLHLIYFSA------- 694 (720)
Q Consensus 664 -----------------w~~~~-------------~------------~~laS~s~D~~v~lWD~~tg~~~~~------- 694 (720)
|++.. + .++||++.||+|||||+.+|+++.+
T Consensus 248 ~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~ 327 (356)
T 2w18_A 248 CAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ 327 (356)
T ss_dssp ----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--C
T ss_pred CCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC
Confidence 44221 1 1579999999999999999999987
Q ss_pred EE-EEeecCCceEEEecCccceEEc
Q 004989 695 LY-CIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 695 v~-~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
+. +++|+|.+.++++|+.|.-.++
T Consensus 328 vvs~vafSPDG~~LaSGS~D~TIkl 352 (356)
T 2w18_A 328 HWSFVKWSGTDSHLLAGQKDGNIFV 352 (356)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEE
T ss_pred eEEEEEECCCCCEEEEEECCCcEEE
Confidence 34 5899999999999999976543
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-12 Score=143.10 Aligned_cols=115 Identities=10% Similarity=0.121 Sum_probs=95.0
Q ss_pred CCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 602 DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.+.+|.+.|.+++|+| ++.+||||+.|++|+|||+.+.... .....++..+ .|...|.+|+|+|++.++|||++.||
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV-LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS-SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc-cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 4668899999999999 9999999999999999998765211 1111244444 45778999999998768999999999
Q ss_pred cEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccceEE
Q 004989 680 VVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|||+.+++++.+ |++++|++.+..+++|+.|...+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 201 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVR 201 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEE
Confidence 999999999988765 68999999999999999886443
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.44 E-value=6.8e-13 Score=144.06 Aligned_cols=130 Identities=8% Similarity=0.091 Sum_probs=104.9
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRS 657 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~ 657 (720)
.++..++|...+.+.+..+...-..+|...|.+++|++ ++.+|||||.|++|+|||++... .++..+ .|..
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-------~~~~~~~~h~~ 250 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-------RAVRTYHGHEG 250 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-------CCCEEECCCSS
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-------cceEEECCcCC
Confidence 45566777777777776665444568899999999987 88999999999999999987431 234444 3577
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceEE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|.+|+|+|+ +.+||||+.||+|+|||+++|+++.. |++++|++.+..+..|+-|...+
T Consensus 251 ~v~~v~~~p~-~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 251 DINSVKFFPD-GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp CCCEEEECTT-SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred CeEEEEEecC-CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 8999999995 56999999999999999999998875 57899999999999998775443
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.4e-13 Score=145.52 Aligned_cols=107 Identities=12% Similarity=0.101 Sum_probs=89.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec--------CCCCEEEEEEecCCCCEEE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--------SRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~i~~l~w~~~~~~~la 673 (720)
.+.+|.+.|.+|+|+|||.+|||||.|++|+|||++++. ++..+. +...|++++|+|+ +.+|+
T Consensus 244 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~ 314 (380)
T 3iz6_a 244 TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH--------QLQVYNREPDRNDNELPIVTSVAFSIS-GRLLF 314 (380)
T ss_dssp EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE--------EEEEECCCCSSSCCSSCSCSEEEECSS-SSEEE
T ss_pred EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc--------EEEEecccccccccccCceEEEEECCC-CCEEE
Confidence 356789999999999999999999999999999998752 111111 1234899999995 56999
Q ss_pred EEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccceEE
Q 004989 674 SSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 674 S~s~D~~v~lWD~~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+.||+|+|||+.+++.+.. |+|++|+|.+..+++|+.|....
T Consensus 315 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 315 AGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp EECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred EEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 999999999999999988754 78999999999999999996543
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.44 E-value=8.3e-13 Score=142.12 Aligned_cols=106 Identities=8% Similarity=0.008 Sum_probs=91.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|++.+|+|||.|++|+|||+.+. .++..+. |...|.+++|+|. .+++||||+.||+
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~--------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG--------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC--------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 3457899999999999999999999999999998776 2444443 4677999999985 3579999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++||+++++++.+ |++++|+|.+..+++|+.|...
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v 264 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATC 264 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeE
Confidence 99999999999876 8999999999999999988643
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.43 E-value=4.2e-13 Score=145.22 Aligned_cols=109 Identities=6% Similarity=-0.013 Sum_probs=89.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCC----cEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeC
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~ 677 (720)
+.+|...|.+|+|+|||.++++|+.|+ +|++||........ .....+ .+...|++|+|+|+ +.+||+|+.
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~V~~~~~Spd-g~~lasgs~ 289 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSV----LRSKQVTNRFKGITSMDVDMK-GELAVLASN 289 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEE----EEEEEEESSCSCEEEEEECTT-SCEEEEEET
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecc----eeeeeecCCCCCeEeEEECCC-CCceEEEcC
Confidence 345788999999999999999999988 68888865432110 011222 34667999999996 569999999
Q ss_pred CCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCccceE
Q 004989 678 EGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++|+|||+.+++++.+ |++|+|+|.+.++++||.|.-.
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE
Confidence 99999999999999886 8999999999999999999754
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.43 E-value=8.7e-13 Score=138.00 Aligned_cols=111 Identities=19% Similarity=0.161 Sum_probs=89.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|||++||||+.|++|+|||+.+.... ..++..+ .|...|.+|+|+|. ++++||||+.||+
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN----WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC----EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc----ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 4678999999999999999999999999999998764211 1123333 45778999999995 3679999999999
Q ss_pred EEEEECCCC---------cEEEE-------EEEEeecCC--ceEEEecCccceEE
Q 004989 681 VQVGQVLHL---------IYFSA-------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWD~~tg---------~~~~~-------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
|+|||+.++ +.+.. |++++|++. +..+.+|+.|...+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEE
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEE
Confidence 999999987 44444 899999999 89999988776433
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.43 E-value=1.6e-12 Score=136.72 Aligned_cols=119 Identities=9% Similarity=0.091 Sum_probs=94.8
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecC
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY 667 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~ 667 (720)
.++++.++| .||.+.|++|+|+|+ +++|||||.|++|+|||+.+.... ...|+..+. |...|++++|+|+
T Consensus 26 ~~~~l~~tL-----~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 26 EQMTLRGTL-----KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---YGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp CEEEEEEEE-----CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---SEEEEEEECCCSSCEEEEEECTT
T ss_pred CceEEEEEE-----CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---cceeeEEEeCCCCCEEEEEECCC
Confidence 445555555 567999999999998 689999999999999998764211 113444444 4678999999995
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 668 IKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 668 ~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.+|||++.|++|++||...+..... +.++.+++....+++|+.|....
T Consensus 98 -g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 98 -GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 153 (340)
T ss_dssp -SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred -CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEE
Confidence 56999999999999999999987765 67888999999999988876543
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-12 Score=137.89 Aligned_cols=121 Identities=9% Similarity=0.154 Sum_probs=99.6
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEE
Q 004989 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
...+++...+.+++..+. +|.+.|.+|+|+|||++|||||.|++|+|||+.+. .++..+.+...|.+
T Consensus 195 ~~i~i~d~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~--------~~~~~~~~~~~v~~ 261 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHI-----GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG--------KHLYTLDGGDIINA 261 (340)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT--------EEEEEEECSSCEEE
T ss_pred CEEEEEECCCCceeeEec-----CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC--------ceeeeecCCceEEe
Confidence 345666666667766664 45889999999999999999999999999998875 35666677788999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------EEEEeecCCceEEEecCccceEE
Q 004989 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 662 l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
++|+|+ + .+++++.|++|+|||+.++..+.+ |++++|+|.+..+++|+.|...+
T Consensus 262 ~~~~~~-~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 262 LCFSPN-R-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EEECSS-S-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eecCCC-C-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 999995 3 455666799999999999877654 79999999999999999987544
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.42 E-value=3.7e-13 Score=145.71 Aligned_cols=79 Identities=14% Similarity=0.138 Sum_probs=68.0
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.+.+|...|.+|+|+|||++||+||.|++|+|||+.++ .++..+ .|...|++|+|||+ +.+|||||.|+
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~--------~~~~~~~~gH~~~V~~v~fSpd-g~~laS~S~D~ 334 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL--------SMSKIFKQAHSFAITEVTISPD-STYVASVSAAN 334 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT--------EEEEEETTSSSSCEEEEEECTT-SCEEEEEETTS
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC--------cEEEEecCcccCCEEEEEECCC-CCEEEEEeCCC
Confidence 45667899999999999999999999999999999876 345443 35778999999996 56999999999
Q ss_pred cEEEEECCCC
Q 004989 680 VVQVGQVLHL 689 (720)
Q Consensus 680 ~v~lWD~~tg 689 (720)
||||||+.++
T Consensus 335 tvrvw~ip~~ 344 (365)
T 4h5i_A 335 TIHIIKLPLN 344 (365)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEcCCC
Confidence 9999999654
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-12 Score=136.92 Aligned_cols=125 Identities=9% Similarity=0.029 Sum_probs=100.9
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCE
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 659 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i 659 (720)
.++..++|...+.+.+..+. +|...|.+|+|+|++.+|||||.|++|+|||++.. +......|...|
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--------~~~~~~~h~~~v 151 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFV-----GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--------CLATLLGHNDWV 151 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--------EEEEECCCSSCE
T ss_pred CCCEEEEEECCCCCeeEEEc-----cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--------eEEEEeccCCcE
Confidence 34566777777666666654 56899999999999999999999999999998643 122233457789
Q ss_pred EEEEEecCC-----CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 660 SSICWNSYI-----KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 660 ~~l~w~~~~-----~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++|+|.. +.+|+|++.|++|++||+++++...+ |++++|+|.+..+++|+.|...+
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~ 221 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIM 221 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 999999853 34899999999999999999988765 89999999999999999886443
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.40 E-value=7.4e-13 Score=142.76 Aligned_cols=129 Identities=12% Similarity=0.043 Sum_probs=101.9
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004989 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
...++..++|...+.+++..++ +|...|.+|+|+|+++ +|++++.|++|+|||+++..... .+....+.
T Consensus 157 gs~dg~v~iwd~~~~~~~~~~~-----~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-----~~~~~~~~ 226 (357)
T 4g56_B 157 GGKDFSVKVWDLSQKAVLKSYN-----AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-----RIDFCASD 226 (357)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-----BCCCTTCC
T ss_pred EeCCCeEEEEECCCCcEEEEEc-----CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee-----eeeecccc
Confidence 3345566777777777777765 4589999999999986 79999999999999998752110 01111235
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceE
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVK 716 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~ 716 (720)
..|.+|+|+|+.+.+||+|+.|++|+|||+++++++.+ |++++|+|.+ .++++|+.|...
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 67999999998888999999999999999999998876 8999999987 578899887543
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.40 E-value=1.7e-12 Score=138.65 Aligned_cols=124 Identities=12% Similarity=0.136 Sum_probs=96.6
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASR 656 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~ 656 (720)
.++..++|...+.+.+..+ .+|...|.+|+|+|||++|||||.|++|+|||+.... ..... .+.
T Consensus 96 ~D~~v~lwd~~~~~~~~~~-----~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~--------~~~~~~~~~~~ 162 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRF-----VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC--------KFSSAEKENHS 162 (343)
T ss_dssp TTSEEEEEETTSSCEEEEE-----ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE--------EEECCTTTSCS
T ss_pred CCCcEEEEECCCCcEEEEE-----cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc--------eeeeecccCCC
Confidence 4456667776666666555 4568999999999999999999999999999986321 11111 346
Q ss_pred CCEEEEEEecCCC---------CEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 657 SKLSSICWNSYIK---------SQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 657 ~~i~~l~w~~~~~---------~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
..|.+++|+|+.. .+|||++.||+|+|||. +++.+.+ |++++|+|.+.++++|+.|...+
T Consensus 163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 163 DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 6799999999752 68999999999999994 4555443 89999999999999999886543
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=2.2e-12 Score=140.61 Aligned_cols=135 Identities=12% Similarity=0.071 Sum_probs=98.7
Q ss_pred hhhhhccccceEEeeeecc--CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc-----cccccceEEec
Q 004989 582 GLCKYLSFSKLRVKADLNQ--GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-----RDIHYPVVEMA 654 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~--~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~ 654 (720)
+..++|...+.+++..+.. ....+|...|.+|+|+|||++|||||.|++|+|||+.+..... ....+......
T Consensus 229 ~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
T 1erj_A 229 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 308 (393)
T ss_dssp SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEEC
T ss_pred CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEec
Confidence 3455666666666666642 2346789999999999999999999999999999987642110 01112223345
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecC------CceEEEecCccceEE
Q 004989 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNK------LLIIFRYGMFQEVKY 717 (720)
Q Consensus 655 ~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~------~~~~~~~~~~~~~~~ 717 (720)
|...|.+++|+|+ +.+||||+.||+|+|||+.+|+++.. |++++|++ .+..+++|+.|....
T Consensus 309 h~~~v~~~~~~~~-~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~ 383 (393)
T 1erj_A 309 HKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKAR 383 (393)
T ss_dssp CSSCEEEEEECGG-GCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEE
T ss_pred ccCcEEEEEECCC-CCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEE
Confidence 6778999999995 46999999999999999999998876 88999876 578999999886543
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.8e-12 Score=135.99 Aligned_cols=102 Identities=8% Similarity=0.060 Sum_probs=89.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
|.+|.+.|.+|+|+|||++||+|+.|++|+|||+.+. .++..+. |...|.+++|+|+ +++||+++.||+|
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i 98 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG--------ERLGTLDGHTGTIWSIDVDCF-TKYCVTGSADYSI 98 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC--------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTTEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc--------hhhhhhhhcCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 3467999999999999999999999999999998765 2444444 5778999999995 5799999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004989 682 QVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 682 ~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
+|||+.+++++.. +.+++|++.+..+..+..+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECC
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCC
Confidence 9999999999887 7999999999999887765
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2.6e-12 Score=148.68 Aligned_cols=107 Identities=11% Similarity=0.095 Sum_probs=90.9
Q ss_pred CCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+.+|...|.+|+|+|++. +|||||.|++|+|||..+. ..+..+ .|...|.+|+|+|+ +.+||||+.|
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~--------~~~~~l~~H~~~V~~v~fspd-g~~las~s~D 211 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--------KFKSTFGEHTKFVHSVRYNPD-GSLFASTGGD 211 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--------EEEEEECCCSSCEEEEEECTT-SSEEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC--------eEeeeeccccCceEEEEECCC-CCEEEEEECC
Confidence 45788999999999999997 5999999999999997654 123333 35678999999996 5699999999
Q ss_pred CcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceE
Q 004989 679 GVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++|+|||+.+|+++.+ |++++|+|.+..+++|+.|...
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v 263 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTI 263 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeE
Confidence 9999999999987643 7899999999999999998643
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.39 E-value=3.3e-12 Score=133.64 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=87.5
Q ss_pred CCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC------------
Q 004989 603 LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI------------ 668 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~------------ 668 (720)
+.+|...|.+|+|+|+ |.+||+|+.|++|+|||++..... .+.....|...|.+++|+|+.
T Consensus 95 ~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-----~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~ 169 (297)
T 2pm7_B 95 HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-----SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 169 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-----CCEEEECCSSCEEEEEECCCC------------
T ss_pred eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-----eeeeeecccCccceEeecCCcccccccCCCCCC
Confidence 3467899999999998 899999999999999998764110 122333457789999999963
Q ss_pred CCEEEEEeCCCcEEEEECCCCc----EEEE-------EEEEeecCCc---eEEEecCccceE
Q 004989 669 KSQIASSNFEGVVQVGQVLHLI----YFSA-------LYCIVLNKLL---IIFRYGMFQEVK 716 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWD~~tg~----~~~~-------v~~v~~~~~~---~~~~~~~~~~~~ 716 (720)
+.+||||+.|++|+|||+++++ .+.+ |++|+|+|.+ .++++|+.|...
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcE
Confidence 4699999999999999998876 4433 8999999984 899999988643
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-12 Score=139.35 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=84.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCc-EEEeeCCcccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEeCC
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKK-IKVFECDAIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~---~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+|.+.|.+|+|+|||.+|||||.|++ |+|||+.++ .++..+. |...|.+|+|+|+ +.+|||++.|
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~--------~~~~~~~~g~h~~~v~~~~~s~~-~~~l~s~s~d 261 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG--------VLVREFRRGLDRADVVDMKWSTD-GSKLAVVSDK 261 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC--------CEEEEEECTTCCSCEEEEEECTT-SCEEEEEETT
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC--------cEEEEEEcCCCCCcEEEEEECCC-CCEEEEEECC
Confidence 4567999999999999999999999999 999999876 2444554 6778999999995 5699999999
Q ss_pred CcEEEEECCCCcEEE--E----------------------------EEEEeecCCceEEEecCccc
Q 004989 679 GVVQVGQVLHLIYFS--A----------------------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~--~----------------------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
++|+|||+.++.... . ..+++|++.+..+..|.-|-
T Consensus 262 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg 327 (355)
T 3vu4_A 262 WTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTR 327 (355)
T ss_dssp CEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTT
T ss_pred CEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCC
Confidence 999999998663211 0 15679999999888887765
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.7e-12 Score=134.97 Aligned_cols=108 Identities=10% Similarity=0.158 Sum_probs=90.0
Q ss_pred CCCCCCCeEEEEECCC---CCEEEEeeCCCcEEEeeCCcccccccccccc-eEEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 603 LLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYP-VVEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d---g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+|.+.|.+|+|+|+ |.+||+|+.|++|+|||+.+... .. .....|...|.+++|+|+ +++||+++.|
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d 107 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ------TIPKAQQMHTGPVLDVCWSDD-GSKVFTASCD 107 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC------EEEEEEEECSSCEEEEEECTT-SSEEEEEETT
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc------eeEEEeccccCCEEEEEECcC-CCEEEEEcCC
Confidence 3567999999999999 69999999999999999876211 11 122345778999999994 5699999999
Q ss_pred CcEEEEECCCCcEEEE------EEEEee--cCCceEEEecCccceEE
Q 004989 679 GVVQVGQVLHLIYFSA------LYCIVL--NKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~------v~~v~~--~~~~~~~~~~~~~~~~~ 717 (720)
|+|+|||+.+++.+.. |++++| ++.+..+.+|+.|...+
T Consensus 108 g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK 154 (368)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEE
Confidence 9999999999998875 899999 99999999998886544
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.37 E-value=3e-12 Score=135.80 Aligned_cols=126 Identities=7% Similarity=-0.021 Sum_probs=101.1
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCC----CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCC
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD----GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRS 657 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~d----g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~ 657 (720)
-.++|...+.+.+..++......|...|.+++|+|+ |.+||+|+.|++|+|||+.+. .++..+. +..
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--------~~~~~~~~~~~ 116 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--------QCIKHYVGHGN 116 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--------CEEEEEESCCS
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--------eEeeeecCCCC
Confidence 345566655555566652222346788999999999 779999999999999998765 2344444 577
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccceE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.|.+++|+|.++++||+++.||+|+|||+.+++.+.. |++++|++.+..+.+|+.|...
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 185 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSL 185 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCE
Confidence 8999999996678999999999999999999988765 7999999999999999888543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.9e-12 Score=138.08 Aligned_cols=108 Identities=13% Similarity=0.152 Sum_probs=88.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|||++||+|+.|++|+|||+..... .++..+. |...|++|+|+|+ ++++||||+.||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc------eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 356799999999999999999999999999999863211 2333443 5678999999874 2679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004989 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.. |++++|++. +..+.+|+.|...
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i 127 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 127 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE
Confidence 9999999997 4443 899999999 8889998887643
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.6e-12 Score=150.74 Aligned_cols=112 Identities=8% Similarity=0.066 Sum_probs=91.6
Q ss_pred CCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 601 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+.+|.+.|.+|+|+|++ ++|||||.|++|+|||+...... ...+... ..|...|.+|+|+|+ +.+||||+.|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~---~~~~~~~~~~h~~~v~~v~~s~~-g~~l~sgs~D 451 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA---YGVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWD 451 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC---SCEEEEEEECCSSCEEEEEECTT-SSEEEEEETT
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc---cccccceecCCCCcEEEEEECCC-CCEEEEEeCC
Confidence 3456779999999999876 79999999999999998754111 0112223 345778999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 679 GVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|+|||+.+++++.+ |+|++|++.+..+++|+.|...
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 496 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 9999999999998876 8999999999999999988644
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.4e-12 Score=144.32 Aligned_cols=104 Identities=14% Similarity=0.182 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++||||+.|++|+|||.... ++..+ .|...|++|+|+|+ +.+|||++.||+|
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~---------~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~v 532 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---------LLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTV 532 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSC---------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC---------EEEEEeCCCCCEEEEEEcCC-CCEEEEEECcCEE
Confidence 4467899999999999999999999999999995322 33333 45778999999996 4699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|||. +|+++.+ |++++|+|.+..+++++-|....
T Consensus 533 ~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 533 KLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp EEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 99996 7888876 89999999999999999887543
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.2e-12 Score=149.04 Aligned_cols=107 Identities=11% Similarity=0.085 Sum_probs=86.9
Q ss_pred CCCCCCCeEEE--EECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-C-CCEEEEEEecCCCCEEEEEeC
Q 004989 603 LLNSSNLVCSL--SFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-R-SKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 603 ~~~~~~~V~sv--~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~-~~i~~l~w~~~~~~~laS~s~ 677 (720)
+.+|...|.+| +|+|+| .+|||||.|++|||||+++.. ++.....+ . ..|.+|+|+|++ ..||+++.
T Consensus 304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~-------~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~~ 375 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA-------TTKTTVSRFRGSNLVPVVYCPQI-YSYIYSDG 375 (524)
T ss_dssp EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH-------HHCEEEEECSCCSCCCEEEETTT-TEEEEECS
T ss_pred eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC-------cccccccccccCcccceEeCCCc-CeEEEeCC
Confidence 34678999999 689998 899999999999999987651 11111122 1 358899999964 58999999
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++|+|||+++++++.+ |++|+|+|.+..+++|+.|.--.
T Consensus 376 d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 376 ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred CCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 99999999999987654 89999999999999999997544
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.33 E-value=6.8e-12 Score=133.82 Aligned_cols=103 Identities=15% Similarity=-0.018 Sum_probs=85.5
Q ss_pred CCCCCeEEEEECC--CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 605 NSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~--dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+|...|.+++|+| +|++|||||.|++|+|||+.+.. ++... .+...|.+++|+|+ +.+||+|+.||+
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--------~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~ 193 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--------QYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGI 193 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--------EEEEECCCSSCCCCEEEECTT-SCEEEEECTTSC
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--------EEEEEecCCCCceEEEEECCC-CCEEEEEcCCCE
Confidence 4568899999999 99999999999999999988752 22222 23456999999995 569999999999
Q ss_pred EEEEECCCCcEE-EE--------EEEEeecCCceEEEecCccceE
Q 004989 681 VQVGQVLHLIYF-SA--------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~-~~--------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+++++.+ .+ |++++|+|.+..+.+|+-+.++
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~ 238 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVV 238 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEE
T ss_pred EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEE
Confidence 999999999877 33 8999999999999999866554
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.33 E-value=7.3e-12 Score=136.37 Aligned_cols=120 Identities=12% Similarity=0.089 Sum_probs=95.1
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004989 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
+..++|...+.+.+..+ .+|...|.+++|+|||++||||+.|++|+|||+.+.. ++..+ .|...|.
T Consensus 119 g~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--------~~~~~~~h~~~v~ 185 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREID-----QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--------NPRTLIGHRATVT 185 (420)
T ss_dssp SCEEEECTTSCEEEEET-----TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------CCEEEECCSSCEE
T ss_pred CCEEEEeCCCcceeeec-----ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--------CceEEcCCCCcEE
Confidence 34556666555555554 3568999999999999999999999999999987652 33333 3577899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE----------E---------------------EEeecCCceEEEe
Q 004989 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL----------Y---------------------CIVLNKLLIIFRY 709 (720)
Q Consensus 661 ~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~v----------~---------------------~v~~~~~~~~~~~ 709 (720)
+++|+|+ +.+|||++.||+|+|||+++++++.++ . +++|++.+..+..
T Consensus 186 ~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (420)
T 3vl1_A 186 DIAIIDR-GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA 264 (420)
T ss_dssp EEEEETT-TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE
T ss_pred EEEEcCC-CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE
Confidence 9999995 569999999999999999999988763 2 3556788888888
Q ss_pred cCccce
Q 004989 710 GMFQEV 715 (720)
Q Consensus 710 ~~~~~~ 715 (720)
|+-|..
T Consensus 265 ~~~dg~ 270 (420)
T 3vl1_A 265 GHVSGV 270 (420)
T ss_dssp EETTSC
T ss_pred EcCCCe
Confidence 887753
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-11 Score=133.51 Aligned_cols=114 Identities=11% Similarity=0.128 Sum_probs=92.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEe
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~l~w~ 665 (720)
..+++...+ .+|...|.+++|+|+| .+||+|+.|++|+|||+.+.. ....+ .+...|.+++|+
T Consensus 61 ~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~h~~~v~~~~~~ 127 (383)
T 3ei3_B 61 KSYKLHRTA-----SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN--------KTSFIQGMGPGDAITGMKFN 127 (383)
T ss_dssp TTCEEEEEE-----CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT--------CEEEECCCSTTCBEEEEEEE
T ss_pred cccceEEec-----cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc--------cceeeecCCcCCceeEEEeC
Confidence 445555555 4568999999999999 999999999999999988652 12222 367889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccceEE
Q 004989 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+++++||+++.||+|+|||+.++ .+.. |++++|++.+..+++|+.|-..+
T Consensus 128 ~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 188 (383)
T 3ei3_B 128 QFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLL 188 (383)
T ss_dssp TTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEE
Confidence 976789999999999999999964 4433 89999999999999998875443
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.32 E-value=3.4e-12 Score=141.77 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=87.3
Q ss_pred CCCCeEEEEECCCCCEEE----EeeCCCcEEEeeCCcccccccccccce---EEec-CCCCEEEEEEecCCCCEEEEEeC
Q 004989 606 SSNLVCSLSFDRDGELFA----AAGVNKKIKVFECDAIINENRDIHYPV---VEMA-SRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~la----t~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~-~~~~i~~l~w~~~~~~~laS~s~ 677 (720)
+...|.+|+|+|||++|| ||+.|++|+|||+.+..........++ ..+. |...|.+|+|+|+.+++|||++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 467899999999999999 899999999999865421110000122 2222 46779999999987889999999
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+|+|||+++++.+.. |+|++|++.+..++.|+.|..
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~ 215 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT 215 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSC
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCc
Confidence 99999999999977643 899999999999999998743
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.32 E-value=5.8e-12 Score=136.62 Aligned_cols=130 Identities=10% Similarity=0.079 Sum_probs=107.8
Q ss_pred hhhhhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCC-CEEEEeeCCC---cEEEeeCCcccccccccccceEEec-
Q 004989 581 EGLCKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDG-ELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMA- 654 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~- 654 (720)
++..++|...+.+.+..+. ++...+|...|.+++|+|+| .+||+|+.|+ +|+|||+++.. .++..+.
T Consensus 187 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-------~~~~~~~~ 259 (416)
T 2pm9_A 187 SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-------TPLQTLNQ 259 (416)
T ss_dssp SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-------SCSBCCCS
T ss_pred CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-------CCcEEeec
Confidence 3345677777778888888 56667788999999999998 6899999999 99999998742 2333333
Q ss_pred -CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceEE
Q 004989 655 -SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVKY 717 (720)
Q Consensus 655 -~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~~ 717 (720)
|...|.+++|+|.++.+||+++.||+|+|||+.+++++.+ |++++|+|.+ ..+++++.|...+
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 5678999999996678999999999999999999999886 7899999998 8999999986543
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.32 E-value=8.3e-12 Score=140.83 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=79.9
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC-----CCEEEEEEecCCCCEEEEEeCCC
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR-----SKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
+|...|.+|+|+|||++||++|.|++|+|||.... +..+.++ ..|.+|+|||+ +++||+|+.||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~----------l~~l~~~~~~~~~sv~svafSPD-G~~LAsgs~DG 151 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKM----------LTNLDSKGNLSSRTYHCFEWNPI-ESSIVVGNEDG 151 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEE----------EEECCCSSCSTTTCEEEEEECSS-SSCEEEEETTS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCce----------eeeccCCCccccccEEEEEEcCC-CCEEEEEcCCC
Confidence 34789999999999999999999999999995442 1112222 25999999995 56999999999
Q ss_pred cEEEEECCCCcE-------EE-----------EEEEEeecCCceEEEecCccceEE
Q 004989 680 VVQVGQVLHLIY-------FS-----------ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWD~~tg~~-------~~-----------~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|||+.++.. +. .|++|+|+|.+ ++.++.|...+
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVr 205 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVF 205 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEE
Confidence 999999999852 22 39999999999 66777777554
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.31 E-value=7.9e-12 Score=146.66 Aligned_cols=128 Identities=13% Similarity=0.119 Sum_probs=98.7
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCE
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 659 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i 659 (720)
.++..++|...+.+.+..+ .+|...|.+|+|+|||.+|||||.|++|+|||.......... .....|...|
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~----~~~~~h~~~v 520 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRF-----VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS----EGGEGHRDWV 520 (694)
T ss_dssp TTSEEEEEETTTTEEEEEE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC----SSTTSCSSCE
T ss_pred CCCcEEEEECCCCcceeEE-----eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec----cCCCCCCCcE
Confidence 3445566666555555544 456899999999999999999999999999997543110000 0001346679
Q ss_pred EEEEEecCC-CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 660 SSICWNSYI-KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~-~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|++|+|+. ...|+||+.||+|+|||+++++++.+ |++++|+|.+..+++|+.|...
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 999999975 35899999999999999999998876 8999999999999999988643
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.30 E-value=9.3e-12 Score=150.77 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=87.8
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
+|.+.|.+|+|+|||++||+|+.|++|+|||.... ..+....+...|.+|+|+| + .+|||++.|++|+||
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~--------~~~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV--------EVVIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVL 84 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC--------EEEEECSSCCCEEEEEEET-T-TEEEEEETTCEEEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc--------EEEEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEE
Confidence 56899999999999999999999999999997654 1223344577899999999 4 499999999999999
Q ss_pred ECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004989 685 QVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 685 D~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+.+++++.+ |+|++|+|.+..+..|+-|-.
T Consensus 85 d~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~ 121 (902)
T 2oaj_A 85 SLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGS 121 (902)
T ss_dssp ETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSC
T ss_pred ECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCc
Confidence 9999998876 899999999999999987754
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.29 E-value=6.8e-12 Score=134.67 Aligned_cols=108 Identities=7% Similarity=0.080 Sum_probs=80.8
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
.+.+|.+.|.+++|+|||++||||+.|++|+|||+.+.. ...++.. ..+...|.+++|+|+ +++||+++.|++
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~ 123 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG-----TWKQTLVLLRLNRAATFVRWSPN-EDKFAVGSGARV 123 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----------CCCCEEECCCCSSCEEEEECCTT-SSCCEEEESSSC
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-----ceeeeeEecccCCceEEEEECCC-CCEEEEEecCCe
Confidence 345679999999999999999999999999999987752 0012333 345778999999995 569999999999
Q ss_pred EEEEECCCCcE---EEE--------EEEEeecCCceEEEecCccce
Q 004989 681 VQVGQVLHLIY---FSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWD~~tg~~---~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+|||+.+++. +.. |++++|+|.+..+++|+.|..
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 99999998863 332 899999999999999998854
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.4e-11 Score=149.07 Aligned_cols=111 Identities=13% Similarity=0.074 Sum_probs=88.2
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc----------------------ccccc---------------c
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN----------------------ENRDI---------------H 647 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~----------------------~~~~~---------------~ 647 (720)
+|...|.+|+|+|||++||+|+.|++|+|||+.+... ...+. -
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 7889999999999999999999999999999875410 00000 0
Q ss_pred cceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------------EEEEeec-----CC---ce
Q 004989 648 YPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------------LYCIVLN-----KL---LI 705 (720)
Q Consensus 648 ~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------------v~~v~~~-----~~---~~ 705 (720)
.|+..+. |.+.|++|+|||++ +||+|+.|++|+|||++++..+.. |+||+|+ ++ +.
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG--~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~ 643 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG--FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSI 643 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS--EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEE
T ss_pred ceeEEEEcCCCcEEEEEecCCc--EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcce
Confidence 1344444 57789999999964 999999999999999998876531 9999999 77 48
Q ss_pred EEEecCccceEE
Q 004989 706 IFRYGMFQEVKY 717 (720)
Q Consensus 706 ~~~~~~~~~~~~ 717 (720)
.+.+|+.|.-.+
T Consensus 644 ~l~sgs~D~tv~ 655 (902)
T 2oaj_A 644 LMVCGTDMGEVI 655 (902)
T ss_dssp EEEEEETTSEEE
T ss_pred EEEEEecCCcEE
Confidence 999999886543
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.29 E-value=6.3e-12 Score=132.76 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=86.6
Q ss_pred CCCCCCCeEEEEECCC-----------------CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEE
Q 004989 603 LLNSSNLVCSLSFDRD-----------------GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICW 664 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-----------------g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w 664 (720)
+.+|...|.+++|+|+ +++|||||.|++|+|||+..... ..++..+ .|...|.+|+|
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~-----~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ-----WKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC-----EEEEECCBCCSSCEEEEEC
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc-----cceeeecccCCCceEEEEe
Confidence 4567899999999998 47999999999999999854310 0123333 34678999999
Q ss_pred ecCC---CCEEEEEeCCCcEEEEECCCC-------cEEEE----EEEEeecCCceEEEecCccceEE
Q 004989 665 NSYI---KSQIASSNFEGVVQVGQVLHL-------IYFSA----LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 665 ~~~~---~~~laS~s~D~~v~lWD~~tg-------~~~~~----v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|++ ..+||||+.||+|+|||+.++ +.+.. |++++|+|.+..+++|+.|..-+
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 9975 369999999999999999862 23433 89999999999999999886543
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.28 E-value=6e-12 Score=135.08 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=88.4
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc----------ccccceEEecCCCCEEEEEEecCCCCEEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR----------DIHYPVVEMASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~ 675 (720)
|...|.+++|+|||++||+|+.|++|+|||+.+...... ....++..+.|...|.+++|+|+ +.+||++
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~ 223 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPS-GNALAYA 223 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTT-SSCEEEE
T ss_pred cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCC-CCEEEEE
Confidence 789999999999999999999999999999864211100 01123344456778999999996 4699999
Q ss_pred eCCCcEEEEECCCCcE----EEE-------EEEEeecCCceEEEecCccceEE
Q 004989 676 NFEGVVQVGQVLHLIY----FSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 676 s~D~~v~lWD~~tg~~----~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.||+|+|||+.++++ +.+ |++++|++.+.++.+|+-+.+..
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~ 276 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPIL 276 (377)
T ss_dssp ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEE
T ss_pred eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEE
Confidence 9999999999999987 433 89999999999999998777653
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.9e-12 Score=143.90 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=84.6
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE--EEecCCCCEEEEEeCC
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI--CWNSYIKSQIASSNFE 678 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l--~w~~~~~~~laS~s~D 678 (720)
.+.+|...|.||+|++++ +||||+.|++|+|||+++.. .|+..+ .|...|.+| +|+|++.++|||||.|
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~-------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE-------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS-------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC-------CceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 456788999999999865 89999999999999987641 344433 457789999 4566433799999999
Q ss_pred CcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccc
Q 004989 679 GVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|+|||||+++++++.+ |++|+|+|.+..+++++.|.
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS 377 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC
Confidence 9999999998875432 57899999988888888775
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.27 E-value=7.5e-12 Score=138.23 Aligned_cols=102 Identities=8% Similarity=0.079 Sum_probs=85.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
+...|++++|+|||.+||+|+.|++|+|||++.. ++..+ .|...|.+|+|+|++..+||+|+.|++|+||
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~---------~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw 278 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK---------ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW 278 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC---------BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc---------eeEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence 3567899999999999999999999999998643 11122 3467899999999888899999999999999
Q ss_pred ECCCCcEEEE----------EEEEeecCCceEEEecCccceE
Q 004989 685 QVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 685 D~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+++++.... |++++|+|.+..+++|+.|...
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i 320 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEI 320 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCE
T ss_pred ecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEE
Confidence 9988764332 8999999999999999988644
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.27 E-value=3e-11 Score=130.23 Aligned_cols=104 Identities=10% Similarity=0.118 Sum_probs=88.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+++|+|+|.+||+|+.|++|++||++. .++..+ .|...|.+++|+|++..+||||+.|++|+|
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---------HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---------CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---------CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 4568899999999999999999999999999842 234443 357789999999976669999999999999
Q ss_pred EECCC----CcEEEE------EEEEeecC-CceEEEecCccceEE
Q 004989 684 GQVLH----LIYFSA------LYCIVLNK-LLIIFRYGMFQEVKY 717 (720)
Q Consensus 684 WD~~t----g~~~~~------v~~v~~~~-~~~~~~~~~~~~~~~ 717 (720)
||+++ ++++.. |++++|++ .+..+++|+.|...+
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp EEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred EeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 99998 677664 89999999 999999999875443
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.8e-11 Score=130.56 Aligned_cols=120 Identities=9% Similarity=-0.051 Sum_probs=89.7
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRS 657 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~ 657 (720)
.++..++|...+.+.+.... .+|...|.+++|+|||.+||+|+.|++|+|||+++... ....+ .|.+
T Consensus 147 ~dg~i~~wd~~~~~~~~~~~----~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~-------~~~~~~~~h~~ 215 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQYIVHS----AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ-------ASSRFPVDEEA 215 (343)
T ss_dssp TTCCEEEEESSSSCEEEEEC----CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS-------CCEECCCCTTS
T ss_pred CCCcEEEEECCCCcEEEEEe----cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC-------CccEEeccCCC
Confidence 34455666666665544432 12355799999999999999999999999999987621 10222 2577
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EE--EEeecCCceEEEecCc
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LY--CIVLNKLLIIFRYGMF 712 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------v~--~v~~~~~~~~~~~~~~ 712 (720)
.|++|+|+|+ +.+|||++ |++|+|||+++++++.+ +. +++|+|.+.+++.++-
T Consensus 216 ~v~~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 216 KIKEVKFADN-GYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CEEEEEECTT-SSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CEEEEEEeCC-CCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 8999999995 56999999 56999999999877532 33 5999999999998554
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=3e-11 Score=130.06 Aligned_cols=112 Identities=13% Similarity=0.190 Sum_probs=86.4
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe------cCCCCEEEEEEecCCCCEEEEE
Q 004989 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM------ASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------~~~~~i~~l~w~~~~~~~laS~ 675 (720)
+.+|.+.|.+|+|+| +|++||||+.|++|+|||+.+..........+.... .|...|.+++|+|+++.+|+|+
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 345799999999999 999999999999999999987522111000001111 2577899999999778899999
Q ss_pred eCCCcEEEEECCCCcEEEE------EEEEeecCCce---EEEecCccc
Q 004989 676 NFEGVVQVGQVLHLIYFSA------LYCIVLNKLLI---IFRYGMFQE 714 (720)
Q Consensus 676 s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~---~~~~~~~~~ 714 (720)
+.||+|++||+.+++.+.. +.++.|++... .+..|..|.
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 9999999999999998876 67888887543 677766653
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.9e-11 Score=130.83 Aligned_cols=105 Identities=12% Similarity=0.273 Sum_probs=90.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEe--CCC
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSN--FEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s--~D~ 679 (720)
+.+|...|.+++|+|||.+||+|+.|++|+|||+.+. .++..+ .+...|.+++|+|++..+|++++ .||
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS--------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS--------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC--------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 4457899999999999999999999999999998865 244444 35778999999998888999976 899
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCceEEEe--cCccce
Q 004989 680 VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRY--GMFQEV 715 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~--~~~~~~ 715 (720)
+|++||+.+++++.+ +.+++|++.+..+.. |+-|-.
T Consensus 285 ~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~ 328 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN 328 (401)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc
Confidence 999999999999877 899999999998888 655543
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.25 E-value=4e-11 Score=130.50 Aligned_cols=104 Identities=16% Similarity=0.164 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+|...|.+|+|+|+| .+||||+.|++|+|||+.+. .++..+ .|...|.+++|+|+ +++||+++.|
T Consensus 127 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 197 (402)
T 2aq5_A 127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--------AAVLTLGPDVHPDTIYSVDWSRD-GALICTSCRD 197 (402)
T ss_dssp EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT--------EEEEEECTTTCCSCEEEEEECTT-SSCEEEEETT
T ss_pred ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC--------CccEEEecCCCCCceEEEEECCC-CCEEEEEecC
Confidence 45679999999999999 69999999999999998875 234444 35778999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE---------EEEEeecCCceEEEec---Cccce
Q 004989 679 GVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG---MFQEV 715 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~---~~~~~ 715 (720)
|+|+|||+++++.+.+ +.++.|++.+.++..| +-|..
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~ 246 (402)
T 2aq5_A 198 KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ 246 (402)
T ss_dssp SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE
T ss_pred CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce
Confidence 9999999999998876 4789999999999988 55543
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.25 E-value=2.8e-11 Score=128.93 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=86.8
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
|.+.|.+++|+|||++||+|+.|++|+|||+.+... .++..+ .|...|.+++|+|+ +++||+++.||+|+||
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~------~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW------VQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVW 79 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE------EEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE------EeeeeecCCCCcccEEEEeCC-CCEEEEEcCCCeEEEE
Confidence 688999999999999999999999999999866410 133344 45778999999995 5799999999999999
Q ss_pred ECCCCcEEEE---------EEEEeecCCceEEEecCccceE
Q 004989 685 QVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 685 D~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+.+++.... |++++|++.+..+..|+.|...
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 120 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 120 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEE
Confidence 9999975443 8999999999999998877543
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.8e-11 Score=142.51 Aligned_cols=104 Identities=10% Similarity=0.019 Sum_probs=90.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|++.|.+++|+|||.+||+|+.|++|+|||+.++ ..+..+. |...|.+++|+|+ +++||+++.||+|
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i 79 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--------VEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRI 79 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEE
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--------ceEEEEecCCCcEEEEEEeCC-CCEEEEEeCCCeE
Confidence 3456999999999999999999999999999998775 2333443 5778999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+.+|+.+.+ |++++|+|.+..+.+|+-|..
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 120 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCE
Confidence 9999999998876 899999999999999888754
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.6e-12 Score=132.43 Aligned_cols=96 Identities=14% Similarity=0.085 Sum_probs=75.4
Q ss_pred hchhhhhhcccCCCCCc--eecccceeecCCCCCcEEEEEecCC--C----CHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEWGD--V----SLRQWLDKPKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnI--V~l~~~~~~~~~~~~~~~lv~E~~g--g----sL~~~L~~~~~~l~~~~~~~i~~QIl~aL 134 (720)
+..+|..+|.++.|++| ..+++ .. ..++||||.| | +|.+++.. .++.++..++.||+.||
T Consensus 116 ~~~~E~~~l~~l~~~~i~~p~~~~----~~----~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l 183 (258)
T 1zth_A 116 WTEKEFRNLERAKEAGVSVPQPYT----YM----KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENV 183 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEE----EE----TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEE----cC----CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHH
Confidence 34578888998888865 33333 11 3489999953 3 88887632 23557889999999999
Q ss_pred HHHH-HCCceeccCCCCcEEEccCCceEEeecCcccCCC
Q 004989 135 YAAH-SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 172 (720)
Q Consensus 135 ~yLH-s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g 172 (720)
.||| +.|||||||||+|||++. .++|+|||++....
T Consensus 184 ~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 184 KRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 9999 999999999999999988 99999999996543
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.24 E-value=4e-11 Score=136.89 Aligned_cols=122 Identities=13% Similarity=0.082 Sum_probs=96.6
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec--CCCCEE
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--SRSKLS 660 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~i~ 660 (720)
..+++.....+... ..+.+|...|.+++|+|||++||+|+.|++|+|||+.+.. ++..+. |...|+
T Consensus 468 ~i~~~~~~~~~~~~----~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~h~~~v~ 535 (615)
T 1pgu_A 468 TIQVFKLSDLEVSF----DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE--------VKTSRWAFRTSKIN 535 (615)
T ss_dssp CEEEEETTEEEEEE----ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEECCSCCCSSCEE
T ss_pred eEEEEECCCccccc----cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc--------ceeEeecCCCCcee
Confidence 34444444433331 3456678999999999999999999999999999998762 333333 567899
Q ss_pred EEEEecC---------CCCEEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 661 SICWNSY---------IKSQIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 661 ~l~w~~~---------~~~~laS~s~D~~v~lWD~~tg-~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+++|+|. ++.+||+++.||+|+|||+.++ +++.. |++++|++.+. +++++.|...+
T Consensus 536 ~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~ 608 (615)
T 1pgu_A 536 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIK 608 (615)
T ss_dssp EEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEE
T ss_pred EEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEE
Confidence 9999992 3569999999999999999998 67765 99999999999 99998887543
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.24 E-value=2.3e-11 Score=132.38 Aligned_cols=99 Identities=10% Similarity=-0.043 Sum_probs=85.6
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
.++....|+|||++||+|+.|++|+|||+.+. .++..+ .|...|.+++|+|+ +.+||||+.||+|+|||+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--------LQREIDQAHVSEITKLKFFPS-GEALISSSQDMQLKIWSV 168 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSC--------EEEEETTSSSSCEEEEEECTT-SSEEEEEETTSEEEEEET
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCc--------ceeeecccccCccEEEEECCC-CCEEEEEeCCCeEEEEeC
Confidence 66777789999999999999999999998765 233333 45778999999995 569999999999999999
Q ss_pred CCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 687 LHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 687 ~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++++.+ |++++|++.+..+.+|+.|..
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 204 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGT 204 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 99988776 899999999999999998864
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.22 E-value=6.3e-11 Score=123.70 Aligned_cols=114 Identities=16% Similarity=0.186 Sum_probs=88.1
Q ss_pred CCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCccccccc-------------------------------------
Q 004989 604 LNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENR------------------------------------- 644 (720)
Q Consensus 604 ~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~------------------------------------- 644 (720)
.+|...|.+++|+|+ +.+||+|+.|++|+|||+.+......
T Consensus 107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 186 (351)
T 3f3f_A 107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA 186 (351)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence 356899999999999 99999999999999999875311000
Q ss_pred --------------ccc-cceEEec-CCCCEEEEEEecCCC---CEEEEEeCCCcEEEEECCCC----------------
Q 004989 645 --------------DIH-YPVVEMA-SRSKLSSICWNSYIK---SQIASSNFEGVVQVGQVLHL---------------- 689 (720)
Q Consensus 645 --------------~~~-~~~~~~~-~~~~i~~l~w~~~~~---~~laS~s~D~~v~lWD~~tg---------------- 689 (720)
... .++..+. |...|.+++|+|+++ ++||||+.||+|+|||++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 266 (351)
T 3f3f_A 187 VSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMF 266 (351)
T ss_dssp EEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------
T ss_pred EecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceecc
Confidence 000 0133333 467899999999753 69999999999999999876
Q ss_pred ------------------------------cEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 690 ------------------------------IYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 690 ------------------------------~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.+.+ |++++|++.+..+++|+.|...+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~ 331 (351)
T 3f3f_A 267 DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVR 331 (351)
T ss_dssp ------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred CCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEE
Confidence 44443 89999999999999999886443
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.7e-11 Score=143.77 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=87.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCC-CCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYI-KSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~-~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|||++|||||.|++|+|||+..... .++..+ .|.+.|++++|+|+. +++||||+.||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~------~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE------EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC------ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 567899999999999999999999999999999763211 233334 357789999999852 679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004989 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.. |+|++|+|. +..+.+|+.|...
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I 125 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 125 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcE
Confidence 9999999997 4443 899999999 8899999887644
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=5.8e-11 Score=130.13 Aligned_cols=112 Identities=9% Similarity=0.054 Sum_probs=86.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccc-cceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIH-YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++|||| .|++|+|||+.+......... .|.....|...|.+++|+|++.++||+|+.||+|
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 35789999999999999999998 799999999984311100000 0111124577899999999765899999999999
Q ss_pred EEEECCCCcE----EE-------------------EEEEEeecCCceEEEecCccce
Q 004989 682 QVGQVLHLIY----FS-------------------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg~~----~~-------------------~v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+++++. +. .|++++|++.+.++++|+...+
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v 308 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSV 308 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEE
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeE
Confidence 9999999885 22 4889999999999998877443
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.22 E-value=4.1e-11 Score=132.20 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=88.3
Q ss_pred CCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 604 LNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.+|...|++|+|+|++. +||||+.|++|+|||+.+........ .+...+ .|...|.+++|+|.++++|||++.||+|
T Consensus 178 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i 256 (430)
T 2xyi_A 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI-DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKL 256 (430)
T ss_dssp ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE-ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee-ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeE
Confidence 35688999999999999 99999999999999998732111111 123333 4577899999999888899999999999
Q ss_pred EEEECCCC---cEEEE-------EEEEeecCCce-EEEecCccceE
Q 004989 682 QVGQVLHL---IYFSA-------LYCIVLNKLLI-IFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWD~~tg---~~~~~-------v~~v~~~~~~~-~~~~~~~~~~~ 716 (720)
++||++++ +.+.. |+|++|+|.+. ++++|+.|...
T Consensus 257 ~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v 302 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV 302 (430)
T ss_dssp EEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeE
Confidence 99999987 44443 89999999886 68888877543
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=6.7e-11 Score=147.55 Aligned_cols=103 Identities=16% Similarity=0.261 Sum_probs=88.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+++|+|||++|||||.|++|+|||+.++ .++..+. |...|.+++|+|+ +.+||||+.||+|
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~--------~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG--------EKLLDIKAHEDEVLCCAFSSD-DSYIATCSADKKV 681 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------CEEEEeccCCCCEEEEEEecC-CCEEEEEeCCCeE
Confidence 4578999999999999999999999999999999876 2344443 4778999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecC--CceEEEecCccc
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNK--LLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~--~~~~~~~~~~~~ 714 (720)
+|||+.+|+++.+ |+|++|++ ....+.+|+.|-
T Consensus 682 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 682 KIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred EEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 9999999999887 89999999 556788887764
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.21 E-value=5.5e-11 Score=125.23 Aligned_cols=108 Identities=7% Similarity=0.031 Sum_probs=87.8
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~-~laS~s~D~~v~ 682 (720)
.+|.+.|.+++|+|||++||+|+.|++|+|||+.+.... ..+.....+...|.+++|+|+ ++ +|++|+.||+|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEIL 82 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEE
Confidence 367999999999999999999999999999998765210 012334456788999999995 67 899999999999
Q ss_pred EEEC-CCCcEEE--------EEEEEeecCCceEEEecCccceEE
Q 004989 683 VGQV-LHLIYFS--------ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWD~-~tg~~~~--------~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+||+ .+++... .|++++|++ +..+.+++.|...+
T Consensus 83 ~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 83 KVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIE 125 (342)
T ss_dssp EECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEE
T ss_pred EEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEE
Confidence 9999 8876532 178999999 99999998886544
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-10 Score=121.41 Aligned_cols=119 Identities=9% Similarity=-0.014 Sum_probs=97.9
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
..+++...+.+.+..+.+ ...|.+++|+|+|++||+|+.|++|++||+.+.. ......+...|.++
T Consensus 206 ~i~~~d~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~v~~~ 271 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQHDF------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--------KYQLHLHESCVLSL 271 (337)
T ss_dssp EEEEEETTTTEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--------EEEECCCSSCEEEE
T ss_pred cEEEEECCCCceEeeecC------CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--------eEEEcCCccceeEE
Confidence 445666666666666654 6789999999999999999999999999987652 22333457789999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccceE
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|+|+ +.+|++++.||+|++||+.+++.+.. +++++|++.+..+.+|+-|...
T Consensus 272 ~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 272 KFAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp EECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred EECCC-CCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeE
Confidence 99995 56999999999999999999998865 8999999999999998877543
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=6.4e-11 Score=147.71 Aligned_cols=123 Identities=8% Similarity=0.037 Sum_probs=101.9
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~ 658 (720)
.++..++|...+.+.+.+++ +|.+.|.+++|+|||++|||||.|++|+|||+.++ .++..+ .|...
T Consensus 635 ~d~~i~vw~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~--------~~~~~~~~~~~~ 701 (1249)
T 3sfz_A 635 ADKTLQVFKAETGEKLLDIK-----AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG--------KLVHTYDEHSEQ 701 (1249)
T ss_dssp TTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSC
T ss_pred CCCeEEEEECCCCCEEEEec-----cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC--------ceEEEEcCCCCc
Confidence 34455666666666666664 56899999999999999999999999999999876 244444 45778
Q ss_pred EEEEEEecC-CCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 659 LSSICWNSY-IKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 659 i~~l~w~~~-~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|.+++|+|+ ...+|+||+.||+|++||+.+++++.+ |++++|+|.+..+++|+.|..
T Consensus 702 v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 702 VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSE
T ss_pred EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCe
Confidence 999999996 345899999999999999999999876 899999999999999988754
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.21 E-value=4.5e-11 Score=131.21 Aligned_cols=120 Identities=15% Similarity=0.057 Sum_probs=89.9
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~ 669 (720)
+.++++++. .+|.+.|.+|+|+| ||++|||||.|++|+|||+.+..... ...+...+.|...|.+|+|+| ++
T Consensus 51 ~g~~~~~~~----~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~-~~ 123 (437)
T 3gre_A 51 RGKLIATLM----ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE--VYSSSLTYDCSSTVTQITMIP-NF 123 (437)
T ss_dssp CCCEEEEEC----TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC--CCSCSEEEECSSCEEEEEECT-TS
T ss_pred cceEEeeec----cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc--ccceeeeccCCCCEEEEEEeC-CC
Confidence 345666662 34789999999999 99999999999999999986621111 112344456788999999999 45
Q ss_pred CEEEEEeCCCcEEEEECC---CCcEEEE-----EEEEeec----------------CCceEEEecCccceEE
Q 004989 670 SQIASSNFEGVVQVGQVL---HLIYFSA-----LYCIVLN----------------KLLIIFRYGMFQEVKY 717 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~---tg~~~~~-----v~~v~~~----------------~~~~~~~~~~~~~~~~ 717 (720)
++||||+.||+|+|||+. +|+.+.. +.++.|+ +.+..+.+|+.|...+
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 195 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVI 195 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEE
Confidence 799999999999999994 7766653 4555544 5688888888775443
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.21 E-value=8.8e-12 Score=136.05 Aligned_cols=110 Identities=7% Similarity=-0.149 Sum_probs=78.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-------CCCEEEEEe
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-------IKSQIASSN 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~-------~~~~laS~s 676 (720)
+|...+....+++++.+|||||.|++|||||..+.... ...++..+ .|.+.|.+|+|+|. ++++|||||
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~---~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETII---TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEE---EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccc---eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 45666777778889999999999999999998764110 00122223 35778999999982 457999999
Q ss_pred CCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceEE
Q 004989 677 FEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVKY 717 (720)
Q Consensus 677 ~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~~ 717 (720)
.|++|||||++++.++.. +.+|+|+|.+ ..+++|+.|....
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEE
Confidence 999999999998887765 8999999987 4899999886543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.21 E-value=9.3e-11 Score=124.84 Aligned_cols=125 Identities=14% Similarity=0.063 Sum_probs=95.3
Q ss_pred hhhhhccccceE--EeeeeccCCCCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004989 582 GLCKYLSFSKLR--VKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 582 ~l~~~~~~~~~~--~~~~l~~~~~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+..++|...+.+ .+..+ .+|...|.+++|+|+ |.+|++|+.|++|+|||+..... ..+.....+..
T Consensus 79 g~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----~~~~~~~~~~~ 148 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVH-----AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAI 148 (379)
T ss_dssp SCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-----CCEEEEECCTT
T ss_pred CEEEEEEcCCCceeEeeee-----cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-----eeeEEecCCCC
Confidence 344555554443 33333 346889999999999 99999999999999999876521 11223334577
Q ss_pred CEEEEEEecC------------CCCEEEEEeCCCcEEEEECCCCcEE----EE-------EEEEeecCC---ceEEEecC
Q 004989 658 KLSSICWNSY------------IKSQIASSNFEGVVQVGQVLHLIYF----SA-------LYCIVLNKL---LIIFRYGM 711 (720)
Q Consensus 658 ~i~~l~w~~~------------~~~~laS~s~D~~v~lWD~~tg~~~----~~-------v~~v~~~~~---~~~~~~~~ 711 (720)
.|.+++|+|. ++.+|++++.||+|+|||+++++.. .. |++++|+|. +..+++|+
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 8999999995 4679999999999999999887532 22 889999999 89999998
Q ss_pred ccceE
Q 004989 712 FQEVK 716 (720)
Q Consensus 712 ~~~~~ 716 (720)
.|...
T Consensus 229 ~dg~i 233 (379)
T 3jrp_A 229 QDRTC 233 (379)
T ss_dssp TTSCE
T ss_pred CCCEE
Confidence 88643
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-10 Score=127.86 Aligned_cols=123 Identities=12% Similarity=0.158 Sum_probs=98.7
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
+.-.++|...+.+++..+. +.+|...|+||+|+|||++||||+.|++|+|||+.+. .++..+. |...|
T Consensus 124 d~tV~lWd~~tg~~~~~~~---~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--------~~~~~~~~h~~~v 192 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 192 (420)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC--------cEEEEEeCCCCce
Confidence 4456777777777766664 3467889999999999999999999999999999876 2344443 46679
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE-EE-------EEEEeecCCceEEEecCccceEE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF-SA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~-~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++|++ .+|+||+.|++|++||+.+.... .+ +.++.|++.+..+.++.-|...+
T Consensus 193 ~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 193 GSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN 255 (420)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccce
Confidence 9999986 58999999999999999876543 32 78999999999999998876543
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.20 E-value=3.8e-11 Score=127.19 Aligned_cols=121 Identities=10% Similarity=0.145 Sum_probs=94.9
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----c
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----A 654 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~ 654 (720)
.++..++|...+.+++..++ +|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+ .
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~ 159 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYV-----GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD--------TLVAIFGGVEG 159 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEE-----SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT--------EEEEEECSTTS
T ss_pred CCCEEEEEEchhceEeeeec-----CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC--------eEEEEeccccc
Confidence 34456667777777777665 4589999999999 9999999999999999998765 233333 3
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-----------------------------------EEEEEe
Q 004989 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-----------------------------------ALYCIV 699 (720)
Q Consensus 655 ~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~-----------------------------------~v~~v~ 699 (720)
+...|.+++|+|+ +.+|++++.||+|++||+++++.+. .|.|++
T Consensus 160 ~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 160 HRDEVLSADYDLL-GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp CSSCEEEEEECTT-SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred ccCceeEEEECCC-CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 5778999999995 5699999999999999999886431 278899
Q ss_pred ecCCceEEEecCccceE
Q 004989 700 LNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 700 ~~~~~~~~~~~~~~~~~ 716 (720)
|+ +..+.+++.|...
T Consensus 239 ~~--~~~l~~~~~d~~i 253 (366)
T 3k26_A 239 WL--GDLILSKSCENAI 253 (366)
T ss_dssp EE--TTEEEEECSSSEE
T ss_pred Ec--CCEEEEEecCCEE
Confidence 98 5577777766543
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.9e-10 Score=120.36 Aligned_cols=119 Identities=8% Similarity=0.052 Sum_probs=98.4
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
...++...+.+++..++ +|...|.+++|+|+|.+|++|+.|++|++||+.+. .++..+.+...|.++
T Consensus 164 ~v~~~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~v~~~ 230 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQ-----GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--------RQLQQHDFTSQIFSL 230 (337)
T ss_dssp CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEE
T ss_pred cEEEEeCCCCceeeeee-----cccCceEEEEECCCCCEEEEEecCCcEEEEECCCC--------ceEeeecCCCceEEE
Confidence 34555555666666664 35789999999999999999999999999998875 244555667789999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|+ +.+|++++.|+.|++||+.+++.... +.+++|++.+..+.+++.|..
T Consensus 231 ~~s~~-~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 288 (337)
T 1gxr_A 231 GYCPT-GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288 (337)
T ss_dssp EECTT-SSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EECCC-CCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc
Confidence 99996 56999999999999999999887654 899999999999999887754
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.20 E-value=1e-10 Score=126.09 Aligned_cols=124 Identities=16% Similarity=0.154 Sum_probs=96.0
Q ss_pred hhhhccccceEEeeeeccCCCCCC---CCCeEEEEECCCCCEEEEeeCC---CcEEEeeCCcccccccccccceEEec--
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNS---SNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMA-- 654 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~---~~~V~sv~f~~dg~~lat~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~-- 654 (720)
..+++...+.+++..+.. ..+| ...|.+++|+|+|.+||+|+.| ++|+|||+.+. .++..+.
T Consensus 208 ~i~i~d~~~~~~~~~~~~--~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~--------~~~~~~~~~ 277 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFES--QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG--------ERIGSLSVP 277 (397)
T ss_dssp EEEEEETTTTEEEEEEEC--CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC--------CEEEEECBC
T ss_pred cEEEEECCCCceeEEEec--cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC--------cccceeccC
Confidence 445555555566655542 1236 7899999999999999999999 99999998765 2333332
Q ss_pred ------------CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------------------
Q 004989 655 ------------SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------------------------- 694 (720)
Q Consensus 655 ------------~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------------------------- 694 (720)
+...|.+++|+|+ +.+||+++.||+|+|||+.+++++.+
T Consensus 278 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 356 (397)
T 1sq9_A 278 THSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 356 (397)
T ss_dssp --------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred cccccccccccccCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCc
Confidence 5778999999995 56999999999999999999987654
Q ss_pred EEEEeecCCc----------eEEEecCccceEE
Q 004989 695 LYCIVLNKLL----------IIFRYGMFQEVKY 717 (720)
Q Consensus 695 v~~v~~~~~~----------~~~~~~~~~~~~~ 717 (720)
|++++|++.+ ..+++|+.|...+
T Consensus 357 v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 357 VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred eeEEEeccccccccccccccceEEEecCCCcEE
Confidence 4589999998 7889888886543
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.20 E-value=9.1e-11 Score=129.41 Aligned_cols=105 Identities=13% Similarity=0.156 Sum_probs=88.5
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 605 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.|...|++|+|+|+|+ +||||+.|++|+|||+++.. .++..+. |...|.+|+|+|++..+|||++.||+|+
T Consensus 275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-------~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-------SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-------CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 5688999999999998 69999999999999998642 2455554 5778999999998878999999999999
Q ss_pred EEECCC--------------CcEEEE-------EEEEeecCCce-EEEecCccceE
Q 004989 683 VGQVLH--------------LIYFSA-------LYCIVLNKLLI-IFRYGMFQEVK 716 (720)
Q Consensus 683 lWD~~t--------------g~~~~~-------v~~v~~~~~~~-~~~~~~~~~~~ 716 (720)
|||+.+ .+.+.. |++++|++.+. ++++++.|-..
T Consensus 348 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i 403 (430)
T 2xyi_A 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIM 403 (430)
T ss_dssp EEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred EEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCE
Confidence 999987 245543 89999999998 89998887643
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=4.3e-11 Score=126.52 Aligned_cols=126 Identities=16% Similarity=0.160 Sum_probs=94.0
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECC---CCCEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCC
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSK 658 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~---dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~ 658 (720)
..+++...+.+.+... .|...|.+++|+| ++.+|++|+.|++|+|||+++..... ..+. ....+...
T Consensus 191 ~i~i~d~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~~~~~ 261 (357)
T 3i2n_A 191 DIKLFDLRNMALRWET------NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK---GFASVSEKAHKST 261 (357)
T ss_dssp EEEEEETTTTEEEEEE------ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT---EEEEEEEECCSSC
T ss_pred eEEEEECccCceeeec------CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc---ceeeeccCCCcCC
Confidence 4455555555554443 3478899999999 99999999999999999987642110 0111 11245778
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-------------------EEEE-------EEEEeecCCceEEE-ecC
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLI-------------------YFSA-------LYCIVLNKLLIIFR-YGM 711 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~-------------------~~~~-------v~~v~~~~~~~~~~-~~~ 711 (720)
|.+++|+|++..+||+++.||+|+|||+.++. .+.+ |++++|++.+..++ +|+
T Consensus 262 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~ 341 (357)
T 3i2n_A 262 VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS 341 (357)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec
Confidence 99999999765589999999999999998653 3333 89999999999888 899
Q ss_pred ccceEE
Q 004989 712 FQEVKY 717 (720)
Q Consensus 712 ~~~~~~ 717 (720)
.|...+
T Consensus 342 ~d~~i~ 347 (357)
T 3i2n_A 342 FDQTVR 347 (357)
T ss_dssp TTSEEE
T ss_pred CCCcEE
Confidence 886544
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.9e-10 Score=123.61 Aligned_cols=127 Identities=9% Similarity=-0.034 Sum_probs=87.3
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCC-----------------------------------CEEEE--e
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-----------------------------------ELFAA--A 625 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-----------------------------------~~lat--~ 625 (720)
..++|...+.+.+.++.+ ...|.+++|++++ .++|. |
T Consensus 82 ~v~iWd~~~~~~~~~~~~------~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg 155 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKV------DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNE 155 (355)
T ss_dssp EEEEEETTTTEEEEEEEC------SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEES
T ss_pred EEEEEECCCCcEEEEEEC------CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCC
Confidence 445666666666666653 3467777777653 23333 5
Q ss_pred eCCCcEEEeeCCcccccccc-------cccc-eEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc-EEEEECCCCcEEEE-
Q 004989 626 GVNKKIKVFECDAIINENRD-------IHYP-VVEM-ASRSKLSSICWNSYIKSQIASSNFEGV-VQVGQVLHLIYFSA- 694 (720)
Q Consensus 626 ~~d~~i~iwd~~~~~~~~~~-------~~~~-~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~-v~lWD~~tg~~~~~- 694 (720)
+.|++|+|||+.+....... .-.| +..+ .|...|++|+|+|+ +.+||||+.||+ |+|||+++|+++.+
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-SDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-SSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 66777777777653100000 0013 4444 45778999999995 579999999999 99999999998775
Q ss_pred --------EEEEeecCCceEEEecCccceE
Q 004989 695 --------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 695 --------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++++|+|.+..+++|+.|...
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v 264 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVSDKWTL 264 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEETTCEE
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEECCCEE
Confidence 7899999999999999998643
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.9e-11 Score=131.13 Aligned_cols=105 Identities=9% Similarity=0.034 Sum_probs=88.1
Q ss_pred CCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 605 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
+|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+. |...|.+++|+|++..+||+++.||+|+
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA--------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC--------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC--------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 6789999999999 9999999999999999998775 2444443 4678999999997768999999999999
Q ss_pred EEECCCCcEE------------------------------------------EEEEEEeecCCceEEEecCccceEE
Q 004989 683 VGQVLHLIYF------------------------------------------SALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWD~~tg~~~------------------------------------------~~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|||+.+++.. ..+++++|++.+.++++|+.|....
T Consensus 332 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~ 408 (416)
T 2pm9_A 332 VQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVS 408 (416)
T ss_dssp EEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBC
T ss_pred EEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEE
Confidence 9999877532 1246889999999999999886543
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.2e-10 Score=127.53 Aligned_cols=131 Identities=8% Similarity=0.038 Sum_probs=98.0
Q ss_pred hhhhhhcccc-ceEEeeeec--cCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004989 581 EGLCKYLSFS-KLRVKADLN--QGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 581 ~~l~~~~~~~-~~~~~~~l~--~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
++..++|... .-+.+..+. ...+.+|...|.+++|+|+| .+||+|+.|++|+|||+++.... ..++..+.++
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~ 272 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC----DRHSKLFEEP 272 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS----CTTCEEECCC
T ss_pred CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc----cceeeEeccC
Confidence 4455666655 333444332 23567889999999999999 99999999999999999875210 0123334332
Q ss_pred -------------CCEEEEEEecCCCCEEEEEeCCCcEEEEECCC-CcEEEEEE----------------------EEee
Q 004989 657 -------------SKLSSICWNSYIKSQIASSNFEGVVQVGQVLH-LIYFSALY----------------------CIVL 700 (720)
Q Consensus 657 -------------~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~t-g~~~~~v~----------------------~v~~ 700 (720)
..|.+++|+|+ +.+||+++. ++|+|||+++ ++++.++. +++|
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 350 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHS-GRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCW 350 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTT-SSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred CCccccccccccCceEEEEEECCC-CCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEE
Confidence 28999999995 569999998 9999999997 87776532 2899
Q ss_pred cCCceEEEecCccceEE
Q 004989 701 NKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 701 ~~~~~~~~~~~~~~~~~ 717 (720)
++.+..+++|+.|-..+
T Consensus 351 s~~~~~l~s~s~dg~v~ 367 (447)
T 3dw8_B 351 NGSDSVVMTGSYNNFFR 367 (447)
T ss_dssp CTTSSEEEEECSTTEEE
T ss_pred CCCCCEEEEeccCCEEE
Confidence 99999999999886554
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.17 E-value=7.5e-11 Score=133.06 Aligned_cols=102 Identities=8% Similarity=0.007 Sum_probs=77.3
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc-cccccccceEEe-----cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-ENRDIHYPVVEM-----ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~-----~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.|.+++|||||++||+||.|++|+|||+....- .+.- ..+..+ +|.++|.+|+|+|++ ||+++.|++|+
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~--i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVr 205 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF--YFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVF 205 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC--EEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc--eeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEE
Confidence 599999999999999999999999999876520 0000 012232 245689999999964 78888899999
Q ss_pred EEECCCCcE------EE-----EEEEEeecCCceEEEecCccceEE
Q 004989 683 VGQVLHLIY------FS-----ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWD~~tg~~------~~-----~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+||+.+++. +. .|++|+|+ +..+++++-.+|+.
T Consensus 206 lWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkL 249 (588)
T 2j04_A 206 SMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHK 249 (588)
T ss_dssp EECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEE
T ss_pred EEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEE
Confidence 999988773 32 18999999 57777777566654
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-10 Score=122.49 Aligned_cols=107 Identities=16% Similarity=0.177 Sum_probs=86.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc----------cccccceEEe-cCCCCEEEEEEecCCCCEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN----------RDIHYPVVEM-ASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~----------~~~~~~~~~~-~~~~~i~~l~w~~~~~~~l 672 (720)
.+|...|.+++|+|+|.+||+|+.|++|+|||+....... .....++..+ .+...|.+++|+|+ +.+|
T Consensus 139 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 217 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN-GSRV 217 (372)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS-SSEE
T ss_pred cccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCC-CCEE
Confidence 4568899999999999999999999999999975321000 0112344455 34678999999995 4699
Q ss_pred EEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecC
Q 004989 673 ASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 673 aS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~ 711 (720)
++++.||+|++||+.+++++.+ +++++|++.+.++..|+
T Consensus 218 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 263 (372)
T 1k8k_C 218 AWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH 263 (372)
T ss_dssp EEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEET
T ss_pred EEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEe
Confidence 9999999999999999998876 89999999999988883
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-10 Score=124.31 Aligned_cols=102 Identities=9% Similarity=0.168 Sum_probs=88.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+++|+|+|++||+|+.|++|+|||+.+. .++..+. +...|.+++|+|++ +|++++.||+|+
T Consensus 244 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~ 313 (425)
T 1r5m_A 244 IGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG--------NSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVR 313 (425)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB--------SCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC--------ccceEecCCCccEEEEEECCCC--EEEEEeCCCcEE
Confidence 356889999999999999999999999999998765 2333443 56789999999965 999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 683 lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+||+.+++.+.. +++++|++.+..++.|+.|-.
T Consensus 314 i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 353 (425)
T 1r5m_A 314 LWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ 353 (425)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred EEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCe
Confidence 999999998876 889999999999999988753
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.2e-10 Score=123.38 Aligned_cols=95 Identities=12% Similarity=0.196 Sum_probs=78.1
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEE--ecCCCCEEEEEeCCCcE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w--~~~~~~~laS~s~D~~v 681 (720)
.+|...|.+++|+|||++||+|+.|++|+|||+.+. .++....+...|.+++| +|+ +.+|++++.||+|
T Consensus 83 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--------~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i 153 (368)
T 3mmy_A 83 QMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN--------QAIQIAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTL 153 (368)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEEEECSS-CEEEEEEETTSEE
T ss_pred ccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC--------CceeeccccCceEEEEEEeCCC-CCEEEEccCCCcE
Confidence 346899999999999999999999999999998876 23445567888999999 774 5689999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEE
Q 004989 682 QVGQVLHLIYFSA------LYCIVLNKLLIIF 707 (720)
Q Consensus 682 ~lWD~~tg~~~~~------v~~v~~~~~~~~~ 707 (720)
+|||+++++.+.. +.++.+.......
T Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPERCYCADVIYPMAVV 185 (368)
T ss_dssp EEECSSCSSCSEEEECSSCEEEEEEETTEEEE
T ss_pred EEEECCCCcEEEEEecCCCceEEEecCCeeEE
Confidence 9999999998876 5566666554333
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.16 E-value=5.7e-11 Score=125.59 Aligned_cols=106 Identities=8% Similarity=0.015 Sum_probs=84.0
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeC---CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC--CCEEEEEeCC
Q 004989 605 NSSNLVCSLSFDRDGE-LFAAAGV---NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI--KSQIASSNFE 678 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~--~~~laS~s~D 678 (720)
+|.+.|.+|+|+|+|. ++|+|+. |++|+|||+.+... .++....+...|.+++|+|+. +.+||+|+.|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL------KLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE------EEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc------cceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 4789999999999996 5667776 99999999876521 123344667889999999974 6799999999
Q ss_pred CcEEEEECCCCc-EEEE-------EEEE------eecCCceEEEecCccceE
Q 004989 679 GVVQVGQVLHLI-YFSA-------LYCI------VLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWD~~tg~-~~~~-------v~~v------~~~~~~~~~~~~~~~~~~ 716 (720)
|+|++||+.+++ .+.. |+++ +|++.+..+.+|+.|...
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 999999999988 5554 7888 567888899999887543
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1e-10 Score=138.72 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=99.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|.+.+.+.+..+. +|.+.|.+++|+|||++||+|+.|++|+|||+.++ .++..+. |...|
T Consensus 34 ~g~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--------~~~~~~~~~~~~v 100 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHPDYI 100 (814)
T ss_dssp TSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCEEEEEECCCCceEEEEe-----cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEecCCCCE
Confidence 4456677777777777765 45889999999999999999999999999998876 2344443 57789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecC-CceEEEecCccceE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNK-LLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg-~~~~~-------v~~v~~~~-~~~~~~~~~~~~~~ 716 (720)
.+++|+|+ +.+||+++.||+|+|||+.++ ..... |.|++|+| .+..+.+|+.|...
T Consensus 101 ~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 101 RSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp EEEEECSS-SSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred EEEEEeCC-CCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 99999995 469999999999999999988 44443 89999999 88899988887643
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.6e-10 Score=127.97 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=82.9
Q ss_pred CCCCCCCCeEEEEECCC---CCEEEEeeCCCcEEEeeCCcccccccccccceEE-e-cCCCCEEEEEEecCCCCEEEEEe
Q 004989 602 DLLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-M-ASRSKLSSICWNSYIKSQIASSN 676 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~d---g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~-~~~~~i~~l~w~~~~~~~laS~s 676 (720)
.+.+|...|.+|+|+|| |++||||+.|++|+|||+.+. .++.. + .|...|.+++|+ ++.+|||++
T Consensus 190 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~ 259 (450)
T 2vdu_B 190 PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC--------FIVDKWLFGHKHFVSSICCG--KDYLLLSAG 259 (450)
T ss_dssp CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT--------TCEEEECCCCSSCEEEEEEC--STTEEEEEE
T ss_pred eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC--------ceeeeeecCCCCceEEEEEC--CCCEEEEEe
Confidence 34567899999999999 999999999999999998765 22322 3 357789999999 567999999
Q ss_pred CCCcEEEEECCCCcEEEEE--------------------------------EEEeecCCceEEEecC
Q 004989 677 FEGVVQVGQVLHLIYFSAL--------------------------------YCIVLNKLLIIFRYGM 711 (720)
Q Consensus 677 ~D~~v~lWD~~tg~~~~~v--------------------------------~~v~~~~~~~~~~~~~ 711 (720)
.|++|+|||+.+|+++.++ .+++|++.+..+..++
T Consensus 260 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 9999999999999987653 4778888887777765
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.7e-10 Score=119.47 Aligned_cols=120 Identities=8% Similarity=0.045 Sum_probs=97.7
Q ss_pred hhhccccc-eEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004989 584 CKYLSFSK-LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 584 ~~~~~~~~-~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
..++...+ .+.+..+. +|...|.+++|+|||.+|++|+.|++|+|||+.+. .++..+.+...+.++
T Consensus 199 i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~~~~~ 265 (369)
T 3zwl_B 199 ISKYDVSNNYEYVDSID-----LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL--------QVLKKYETDCPLNTA 265 (369)
T ss_dssp EEEEETTTTTEEEEEEE-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECSSCEEEE
T ss_pred EEEEECCCCcEeEEEEe-----cCCCceeEEEECCCCCEEEEecCCceEEEEECCCC--------ceeeeecCCCCceeE
Confidence 34444444 45555554 35789999999999999999999999999998775 345555577889999
Q ss_pred EEecCCCCEEEEEeCCC--------------cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 663 CWNSYIKSQIASSNFEG--------------VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~--------------~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|+ +.+|++++.|+ .|++||+.+++.+.. |++++|+|.+..+++|+.|...+
T Consensus 266 ~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 340 (369)
T 3zwl_B 266 VITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR 340 (369)
T ss_dssp EECSS-SSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EecCC-CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence 99996 46888888888 899999999998876 89999999999999999886543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.7e-10 Score=122.95 Aligned_cols=122 Identities=14% Similarity=0.186 Sum_probs=95.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++-.++|...+.+....+.. .|...|.+|+|+|||.+||+|+.|++|+|||+.+. ..+..+ .|...|
T Consensus 112 d~~v~lw~~~~~~~~~~~~~----~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~v 179 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAET----DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ--------TKLRTMAGHQARV 179 (401)
T ss_dssp TTEEEEEETTTCCEEEEEEC----CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCE
T ss_pred CCeEEEeeCCCCcEeEeeec----CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC--------eEEEEecCCCCce
Confidence 33455566655555555542 26889999999999999999999999999998765 234444 457789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCC-CcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLH-LIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~t-g~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++|++ ++|++++.||+|++||+++ +..+.. |.+++|++.+..+++|+.|...+
T Consensus 180 ~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 180 GCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQ 242 (401)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Confidence 9999965 5999999999999999994 444444 89999999999999999875443
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.1e-10 Score=123.95 Aligned_cols=106 Identities=10% Similarity=0.099 Sum_probs=80.7
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeC----CcccccccccccceEEec-----------CCCCEEEEEEecCCCC
Q 004989 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFEC----DAIINENRDIHYPVVEMA-----------SRSKLSSICWNSYIKS 670 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~----~~~~~~~~~~~~~~~~~~-----------~~~~i~~l~w~~~~~~ 670 (720)
...|.+++|+|||. +||+|+.|++|+|||+ .++... ... .+...+. +.+.|++++|+|+ ++
T Consensus 45 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~ 121 (425)
T 1r5m_A 45 LDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY-WKL-TIIAELRHPFALSASSGKTTNQVTCLAWSHD-GN 121 (425)
T ss_dssp CSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C-EEE-EEEEEEECCCCCC------CBCEEEEEECTT-SS
T ss_pred cCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc-ccc-cccccccccccccccccCCCCceEEEEEcCC-CC
Confidence 68899999999999 9999999999999998 654200 000 0111111 3458999999995 57
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 671 QIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 671 ~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+||+++.||+|+||| .+++.+.. |++++|++.+..+.+++.|...
T Consensus 122 ~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVT 173 (425)
T ss_dssp EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeE
Confidence 999999999999999 67777765 8999999999999988877543
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.7e-10 Score=128.03 Aligned_cols=96 Identities=15% Similarity=0.231 Sum_probs=77.8
Q ss_pred CCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+|+ +.+||||+.|++|+|||+++.. .......|...|.+++|+|+ +++||+|+.||+|
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~-------~~~~~~~~~~~v~~v~wspd-g~~lasgs~dg~v 216 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV-------KVCATLPSTVAVTSVCWSPK-GKQLAVGKQNGTV 216 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE-------EEEEEECGGGCEEEEEECTT-SSCEEEEETTSCE
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-------ceeeccCCCCceeEEEEcCC-CCEEEEEcCCCcE
Confidence 4567899999999998 7899999999999999987651 12223345678999999996 6799999999999
Q ss_pred EEEECCCCcEEE--------------EEEEEeecCCceEE
Q 004989 682 QVGQVLHLIYFS--------------ALYCIVLNKLLIIF 707 (720)
Q Consensus 682 ~lWD~~tg~~~~--------------~v~~v~~~~~~~~~ 707 (720)
++||++ ++... .|.+++|++....+
T Consensus 217 ~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 217 VQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 999998 54433 47889998877666
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.8e-10 Score=117.87 Aligned_cols=97 Identities=14% Similarity=0.053 Sum_probs=82.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
|...|.+++|+|+|. |++|+.|++|+|||+.+. .++..+. +...|++++|+|++ .|++++.||+|+||
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iw 251 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG--------DVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIW 251 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEE
T ss_pred CcccEEEEEEcCCCe-EEEccCCCeEEEEECCch--------hhhhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEE
Confidence 688999999999999 999999999999998765 2444443 57789999999965 58999999999999
Q ss_pred ECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 685 QVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 685 D~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|+.+++.+.. +++++|++.+.++. ++.|-
T Consensus 252 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~dg 287 (313)
T 3odt_A 252 SKENGSLKQVITLPAISIWSVDCMSNGDIIV-GSSDN 287 (313)
T ss_dssp CTTTCCEEEEEECSSSCEEEEEECTTSCEEE-EETTS
T ss_pred ECCCCceeEEEeccCceEEEEEEccCCCEEE-EeCCC
Confidence 9999998876 89999999988554 55554
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.12 E-value=3.4e-10 Score=124.15 Aligned_cols=106 Identities=9% Similarity=0.113 Sum_probs=87.2
Q ss_pred CCCCCCCeEEEEECCCCC-EEEE--eeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEE--eC
Q 004989 603 LLNSSNLVCSLSFDRDGE-LFAA--AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS--NF 677 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~-~lat--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~--s~ 677 (720)
...|.+.|.+++|+|++. ++|+ |+.|++|+|||+.++ .++..+.++..+.+++|+|++. .|+++ +.
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~--------~~~~~~~~~~~v~~~~~~~~~~-~lv~~sg~~ 342 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--------ACLSAVDAHSQVCSILWSPHYK-ELISGHGFA 342 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT--------EEEEEEECSSCEEEEEEETTTT-EEEEEECTT
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc--------ccceeeccccceeeeeecCCCC-eEEEEEecC
Confidence 346789999999999775 5665 457999999999876 3455566677899999999765 45443 37
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++|+|||+.+++++.+ |++++|+|.+..+++|+.|+...
T Consensus 343 d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp TCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 99999999999999987 89999999999999999998544
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=6.7e-10 Score=115.41 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=87.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc------c-------------------------------
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR------D------------------------------- 645 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~------~------------------------------- 645 (720)
+.+|...+.+++|+++|++|+||+.|++|+|||+++...... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l 225 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 225 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence 456789999999999999999999999999999875311100 0
Q ss_pred ----cccceEEecCCCCEEEEEEecCCCCEEE-EEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 646 ----IHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 646 ----~~~~~~~~~~~~~i~~l~w~~~~~~~la-S~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
.........+...+.+++|+|.+..+++ +++.|++|+|||+.+++++.+ |+|++|+|.+..+++|+.|
T Consensus 226 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 226 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp EETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 0001112233556789999997654333 345799999999999999987 8999999999999999999
Q ss_pred ceEE
Q 004989 714 EVKY 717 (720)
Q Consensus 714 ~~~~ 717 (720)
....
T Consensus 306 ~~v~ 309 (318)
T 4ggc_A 306 ETLR 309 (318)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 7544
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.12 E-value=3.1e-10 Score=125.51 Aligned_cols=115 Identities=8% Similarity=0.063 Sum_probs=94.2
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..+++...+.+.+..+. +|...|.+++|+|+|.+||+|+.|++|+|||+.++ .++..+. |...|
T Consensus 289 d~~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--------~~~~~~~~h~~~v 355 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYILS-----GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG--------ELMYTLQGHTALV 355 (464)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCeEEEEECCCCcEEEEec-----CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--------cEEEEEeCCCCcE
Confidence 4455666666666666654 46899999999999999999999999999999876 2454543 46789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
.+++|++ .+|+|++.||+|++||+.+++.... +.+++|++.+..++.|+
T Consensus 356 ~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 356 GLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred EEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec
Confidence 9999984 6999999999999999999987765 56778999999999888
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.6e-10 Score=126.38 Aligned_cols=106 Identities=14% Similarity=0.013 Sum_probs=86.0
Q ss_pred CCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCC--cccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEe
Q 004989 603 LLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECD--AIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSN 676 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~---~~~~~i~~l~w~~~~~~~laS~s 676 (720)
+.+|.+.|.+++|+|||++| |+|+.|++|+|||+. +. .++..+ .+...|.+|+|+|+ +.+||+|+
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~--------~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~ 168 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK--------NVLKLRKRFCFSKRPNAISIAED-DTTVIIAD 168 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS--------SCEEEEEEEECSSCEEEEEECTT-SSEEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC--------ceeeeeecccCCCCceEEEEcCC-CCEEEEEe
Confidence 45678899999999999995 999999999999987 43 123333 34678999999995 46999999
Q ss_pred CCCcEEEEECCCCcEEE----E-------EEEEeecCC---ceEEEecCccceEE
Q 004989 677 FEGVVQVGQVLHLIYFS----A-------LYCIVLNKL---LIIFRYGMFQEVKY 717 (720)
Q Consensus 677 ~D~~v~lWD~~tg~~~~----~-------v~~v~~~~~---~~~~~~~~~~~~~~ 717 (720)
.||.|.+||+.+++... . |+|++|+|. +..+++|+.|...+
T Consensus 169 ~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~ 223 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIK 223 (450)
T ss_dssp TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEE
T ss_pred CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEE
Confidence 99999999998887542 1 999999999 99999999885443
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.10 E-value=6.5e-10 Score=115.07 Aligned_cols=110 Identities=12% Similarity=0.153 Sum_probs=83.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~ 669 (720)
..++++.+++ +|.+.|.+|+| |+|.+||||+.|++|+|||+.+.. .......+...|.+++|+|+ +
T Consensus 6 ~~~~~~~~l~-----~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~-------~~~~~~~~~~~v~~~~~~~~-~ 71 (313)
T 3odt_A 6 TGYQLSATLK-----GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW-------LGTVVYTGQGFLNSVCYDSE-K 71 (313)
T ss_dssp CCCEEEEEEC-----CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE-------EEEEEEECSSCEEEEEEETT-T
T ss_pred ccHHHHHHhh-----CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE-------EEEEeecCCccEEEEEECCC-C
Confidence 3455666664 46899999999 999999999999999999986541 11222345778999999995 5
Q ss_pred CEEEEEeCCCcEEEEECCCC---cEEEE-------EEEEeecCCceEEEecCccce
Q 004989 670 SQIASSNFEGVVQVGQVLHL---IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~tg---~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+||+++.||+|++||+... +.+.. |++++|+ ...+.+|+.|..
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~ 125 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVISGSWDKT 125 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEEEEETTSE
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CCEEEEEeCCCC
Confidence 69999999999999998754 33333 8899994 446666666543
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.10 E-value=5.8e-10 Score=122.34 Aligned_cols=102 Identities=11% Similarity=0.200 Sum_probs=85.2
Q ss_pred CCCCeEEEE--ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 606 SSNLVCSLS--FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 606 ~~~~V~sv~--f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+...+.+++ |++|+.+||+|+.|++|+|||+++. .++..+. |...|++++|+|+ +.+||+|+.||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--------~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~ 237 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL--------ERLQIIENSPRHGAVSSICIDEE-CCVLILGTTRGI 237 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC--------CEEEEEECCGGGCCEEEEEECTT-SCEEEEEETTSC
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--------eeeEEEccCCCCCceEEEEECCC-CCEEEEEcCCCe
Confidence 567788888 7799999999999999999999775 2344433 4678999999996 679999999999
Q ss_pred EEEEECCCCcEEEE--------EEEE----eecCCceEEEecCccceE
Q 004989 681 VQVGQVLHLIYFSA--------LYCI----VLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~~~--------v~~v----~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+++++++.+ |+++ +|++.+..+++|+.|...
T Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 238 IDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 99999999999875 7888 566678899999988643
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.2e-10 Score=135.95 Aligned_cols=124 Identities=11% Similarity=0.107 Sum_probs=93.4
Q ss_pred hhhhhhcccc--ceEEeeeeccCCCCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cC
Q 004989 581 EGLCKYLSFS--KLRVKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-AS 655 (720)
Q Consensus 581 ~~l~~~~~~~--~~~~~~~l~~~~~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~ 655 (720)
++..++|... +.+.+.++ .+|.+.|.+++|+|+ |.+|||||.|++|+|||+.+... .++..+ .|
T Consensus 30 dg~I~vwd~~~~~~~~~~~l-----~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~------~~~~~~~~h 98 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTL-----TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW------SQIAVHAVH 98 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE------EEEEEECCC
T ss_pred CCcEEEEecCCCCCccceec-----cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc------cccccccCC
Confidence 3445555544 44555554 456899999999988 99999999999999999876411 123333 35
Q ss_pred CCCEEEEEEecCC-CCEEEEEeCCCcEEEEECCCCcEEE---------EEEEEeecC-------------CceEEEecCc
Q 004989 656 RSKLSSICWNSYI-KSQIASSNFEGVVQVGQVLHLIYFS---------ALYCIVLNK-------------LLIIFRYGMF 712 (720)
Q Consensus 656 ~~~i~~l~w~~~~-~~~laS~s~D~~v~lWD~~tg~~~~---------~v~~v~~~~-------------~~~~~~~~~~ 712 (720)
...|++++|+|+. +++|++|+.||+|+|||+.++.... .|++++|+| .+..+.+|+-
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~ 178 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 178 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC
Confidence 7789999999963 6799999999999999999883221 189999999 4777888776
Q ss_pred cce
Q 004989 713 QEV 715 (720)
Q Consensus 713 ~~~ 715 (720)
|-.
T Consensus 179 dg~ 181 (753)
T 3jro_A 179 DNL 181 (753)
T ss_dssp TSC
T ss_pred CCe
Confidence 653
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.08 E-value=5.9e-10 Score=123.28 Aligned_cols=101 Identities=11% Similarity=0.136 Sum_probs=82.0
Q ss_pred CCCC-CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 605 NSSN-LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~-~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
+|.+ +|.++.| ++.+||||+.|++|+|||+.+. .++..+. |.+.|.+++|+|++ +|+||+.||+|+
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~--------~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~ 186 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--------KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVR 186 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEE
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC--------cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEE
Confidence 3454 4677777 5689999999999999998776 2444444 57789999999854 899999999999
Q ss_pred EEECCCCcEEEE-------EEEEeec--CCceEEEecCccceEE
Q 004989 683 VGQVLHLIYFSA-------LYCIVLN--KLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWD~~tg~~~~~-------v~~v~~~--~~~~~~~~~~~~~~~~ 717 (720)
|||+.+++++.. |.|++|+ +.+..+.+|+.|...+
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 999999998876 8899998 5778888888876443
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.08 E-value=3e-10 Score=120.77 Aligned_cols=97 Identities=5% Similarity=0.059 Sum_probs=70.0
Q ss_pred CCCeEEEEECCC----CCEEEEeeC--------------------CCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004989 607 SNLVCSLSFDRD----GELFAAAGV--------------------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 607 ~~~V~sv~f~~d----g~~lat~~~--------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
.+.|++|+|+|| ++++|++|. |++|++|++.... ........+...++.+
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG------~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG------GGKENQFLMPPEETIL 184 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS------CEEEEEEECCCSSCEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCC------ceeeeeccCCCceeeE
Confidence 357899999999 888888774 7777777764311 1111222345678888
Q ss_pred EEec--CCCCEEEEEeCCCcEEEEECCCCcEEEEE----------EEEeecCCceEEEe
Q 004989 663 CWNS--YIKSQIASSNFEGVVQVGQVLHLIYFSAL----------YCIVLNKLLIIFRY 709 (720)
Q Consensus 663 ~w~~--~~~~~laS~s~D~~v~lWD~~tg~~~~~v----------~~v~~~~~~~~~~~ 709 (720)
+|+| .++.+|||||+|++|||||+.||+++.++ .+++|+|.+..++.
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEE
Confidence 8887 34579999999999999999999999884 46789999988743
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.4e-09 Score=112.94 Aligned_cols=122 Identities=12% Similarity=0.157 Sum_probs=96.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
+.-.++|...+.+++..++ +.+|...|.+|+|+|+|++|||||.|++|+|||+.+. .++..+. |...+
T Consensus 44 D~tV~iWd~~tg~~~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--------~~~~~~~~h~~~~ 112 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 112 (318)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc--------eeEEEecCccceE
Confidence 4556778777777777775 3467899999999999999999999999999999876 2343333 45567
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-E-------EEEEeecCCceEEEecCccceE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-A-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~-~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.++++++ .+|+|++.|+.+++|+..++.... . +.++.|++.+..+.+++.|...
T Consensus 113 ~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 174 (318)
T 4ggc_A 113 GSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLV 174 (318)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcce
Confidence 7766654 589999999999999998875443 2 7899999999999999888643
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.06 E-value=8e-10 Score=118.97 Aligned_cols=103 Identities=13% Similarity=0.142 Sum_probs=87.3
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----C---CCCEEEEEEecCCCCEEEEEeC
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----S---RSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~---~~~i~~l~w~~~~~~~laS~s~ 677 (720)
.|...|.+++|+|+| +||+|+.|++|+|||+++. .++..+. | ...|.+++|+|+ +.+||+++.
T Consensus 184 ~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~h~~~~~~i~~i~~~~~-~~~l~~~~~ 253 (397)
T 1sq9_A 184 TPSQFATSVDISERG-LIATGFNNGTVQISELSTL--------RPLYNFESQHSMINNSNSIRSVKFSPQ-GSLLAIAHD 253 (397)
T ss_dssp SSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT--------EEEEEEECCC---CCCCCEEEEEECSS-TTEEEEEEE
T ss_pred CCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC--------ceeEEEeccccccccCCccceEEECCC-CCEEEEEec
Confidence 468899999999999 9999999999999998765 2444444 3 678999999996 569999999
Q ss_pred C---CcEEEEECCCCcEEEE--------------------EEEEeecCCceEEEecCccceEE
Q 004989 678 E---GVVQVGQVLHLIYFSA--------------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D---~~v~lWD~~tg~~~~~--------------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
| |+|+|||+.+++.+.+ |++++|++.+..+.+|+.|...+
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 9 9999999999987763 57899999999999998876443
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.4e-09 Score=116.81 Aligned_cols=105 Identities=10% Similarity=0.045 Sum_probs=88.9
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC--CEEEEEeCCC
Q 004989 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK--SQIASSNFEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~--~~laS~s~D~ 679 (720)
..+|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+.+...+.+++|+|... .+|++++.||
T Consensus 95 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 95 PDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--------QTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp TTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred cccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--------ccceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 456899999999999 7789999999999999998875 2445555677899999998643 4999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCce-EEEecCccce
Q 004989 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLI-IFRYGMFQEV 715 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------v~~v~~~~~~~-~~~~~~~~~~ 715 (720)
.|++||+.+++.+.. |+|++|+|.+. ++++|+.|-.
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~ 210 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSR 210 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC
T ss_pred eEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc
Confidence 999999999988766 89999999988 5778877654
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.04 E-value=2.4e-10 Score=120.33 Aligned_cols=97 Identities=10% Similarity=0.135 Sum_probs=79.9
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeC-CcccccccccccceEEec--CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 605 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFEC-DAIINENRDIHYPVVEMA--SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~--~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+|...|.+++|+|+|+ +||+|+.|++|++||+ .+.. ...... +...|.+++|+| +++|++++.||+
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--------~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~ 123 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--------FQALTNNEANLGICRICKYG--DDKLIAASWDGL 123 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS--------EEECBSCCCCSCEEEEEEET--TTEEEEEETTSE
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc--------eEeccccCCCCceEEEEeCC--CCEEEEEcCCCe
Confidence 5688999999999999 9999999999999998 6652 112223 567899999999 579999999999
Q ss_pred EEEEECCC---------CcEEEE------EEEEeecCCceEEEecCcc
Q 004989 681 VQVGQVLH---------LIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWD~~t---------g~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+++ ++++.+ +++++|++.. +..|+.|
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEEST
T ss_pred EEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCC
Confidence 99999988 765543 8999999988 5555555
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.7e-09 Score=119.19 Aligned_cols=116 Identities=9% Similarity=0.182 Sum_probs=92.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----CC
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----SR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~ 656 (720)
++..+++...+.+.+.++. +|...|.+++| ++.+|++|+.|++|+|||+.+. .++..+. +.
T Consensus 298 d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~ 362 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLT-----GHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTG--------QCLQTLQGPNKHQ 362 (445)
T ss_dssp TSCEEEEETTTCCEEEEEC-----CCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTC--------CEEEEECSTTSCS
T ss_pred CCeEEEEECCCCCEEEEEc-----CCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCC--------cEEEEEccCCCCC
Confidence 3445566666666666654 45788888887 4679999999999999998765 2333333 46
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------------EEEEeecCCceEEEecCccc
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
..|.+++|++ ++||+|+.||+|+|||+.+|+.+.. |++++|++.+..++.|+.|.
T Consensus 363 ~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 363 SAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp SCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred CCEEEEEECC---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 6799999974 6999999999999999999998764 79999999999999998876
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.02 E-value=2.2e-09 Score=115.51 Aligned_cols=118 Identities=8% Similarity=-0.013 Sum_probs=91.3
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEE
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
..+++...+.+++..+.+ ...|.+++|+|||+++ ++++.|++|++||+.++ ..+..+.+...+.+
T Consensus 13 ~v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~v~~ 78 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPV------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVPAGSSPQG 78 (391)
T ss_dssp EEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEECSSSEEE
T ss_pred EEEEEECCCCeEEEEeec------CCCcceEEECCCCCEEEEECCCCCeEEEEECCCC--------eEEEEEECCCCccc
Confidence 345556666677777763 2348999999999975 78889999999998775 24455555668999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCccc
Q 004989 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQE 714 (720)
Q Consensus 662 l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~-~~~~~~~ 714 (720)
++|+|++..++++++.|++|++||+.+++.+.. +++++|++.+..+ ..++-|.
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK 138 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCC
Confidence 999997654456777789999999999998876 7899999998755 6666554
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=98.99 E-value=3.3e-09 Score=120.88 Aligned_cols=118 Identities=14% Similarity=0.160 Sum_probs=93.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCC---CeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe---
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSN---LVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--- 653 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~---~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 653 (720)
++..++|...+.+.+..++ +|.. .|.+++|+|+ |++||+|+.|++|+|||+.+. .++..+
T Consensus 182 d~~v~vwd~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~ 248 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSASDR-----THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG--------EFLKYIEDD 248 (615)
T ss_dssp TTEEEEEETTTBEEEEEEC-----SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC--------CEEEECCBT
T ss_pred CCcEEEEeCCCcceeeeec-----ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC--------CEeEEeccc
Confidence 4455667777777777775 3466 8999999999 999999999999999998775 244455
Q ss_pred --cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccc
Q 004989 654 --ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 654 --~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.+...|.+++|+ ++.+|++++.||+|++||+.+++++.+ +.++.|+ .+..+..|+.|.
T Consensus 249 ~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g 319 (615)
T 1pgu_A 249 QEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDG 319 (615)
T ss_dssp TBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTS
T ss_pred ccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCC
Confidence 567789999999 567999999999999999999998876 4466665 555666666554
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=5.3e-09 Score=115.09 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=78.3
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.|++| ||++||+|+.|++|+|||..+. .++..+ .|...|.+++|+ +++||||+.||+|+|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--------ECKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRV 197 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--------CEEEEECCCSSCEEEEECC---SSEEEEEETTSCEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC--------eEEEEEcCCCCcEEEEEEC---CCEEEEEcCCCeEEE
Confidence 45678999988 7999999999999999998765 233334 357789999993 469999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 684 WD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+.+++++.+ |.+++|++. .+.+|+.|..
T Consensus 198 wd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~ 234 (435)
T 1p22_A 198 WDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRS 234 (435)
T ss_dssp EESSSCCEEEEECCCCSCEEEEECCTT--EEEEEETTSC
T ss_pred EECCCCcEEEEEcCCCCcEEEEEEcCC--EEEEeeCCCc
Confidence 99999999887 889999864 6677766643
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=98.93 E-value=7.4e-09 Score=113.93 Aligned_cols=98 Identities=13% Similarity=0.218 Sum_probs=81.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++| +|++||+|+.|++|+|||+.+. .++..+. +...|.+++|++ ++|++|+.||+|
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~~~~~v~~~~~~~---~~l~~g~~dg~i 318 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC--------EFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTI 318 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEEET---TEEEEEETTSCE
T ss_pred ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC--------cEEEEEcCCCCcEEEEEeCC---CEEEEEeCCCeE
Confidence 4578899999999 8899999999999999998875 2444443 467899999964 699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+++|+++.+ |+|++| .+..+++|+.|..
T Consensus 319 ~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 319 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred EEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence 9999999999887 889999 4566777777753
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=98.93 E-value=6.2e-09 Score=114.66 Aligned_cols=115 Identities=10% Similarity=0.114 Sum_probs=89.3
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~ 658 (720)
.++..+.|...+.+.+.+++ +|...|.+++|+ +.+|||||.|++|+|||+.++ .++..+. |...
T Consensus 137 ~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~h~~~ 201 (445)
T 2ovr_B 137 DDNTLKVWSAVTGKCLRTLV-----GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG--------ECIHTLYGHTST 201 (445)
T ss_dssp TTSCEEEEETTTCCEEEECC-----CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSC
T ss_pred CCCcEEEEECCCCcEEEEEc-----CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC--------cEEEEECCCCCc
Confidence 34455666666666666654 568999999997 679999999999999998776 2333443 4677
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|.+++|++ +.|++|+.||+|++||+.+++++.. |.|++|+ +..+++|+.|.
T Consensus 202 v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg 259 (445)
T 2ovr_B 202 VRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDF 259 (445)
T ss_dssp EEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC--SSCEEEEETTS
T ss_pred EEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEEC--CCEEEEEcCCC
Confidence 99999975 5799999999999999999998876 7888884 45566666654
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.2e-10 Score=126.29 Aligned_cols=67 Identities=7% Similarity=0.160 Sum_probs=56.2
Q ss_pred EEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCC----------ceEEeec
Q 004989 97 VHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN----------HVSFIES 165 (720)
Q Consensus 97 ~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~----------~vkliDf 165 (720)
++|||| .|.+|.++.. ..++..++.||+.+|.|||++|||||||||.|||++.++ .+.||||
T Consensus 187 ~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~ 259 (397)
T 4gyi_A 187 TIVMSLVDALPMRQVSS-------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXF 259 (397)
T ss_dssp EEEEECCSCEEGGGCCC-------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCC
T ss_pred eEEEEecCCccHhhhcc-------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEe
Confidence 699999 8888876431 124567899999999999999999999999999999877 3899999
Q ss_pred CcccC
Q 004989 166 ASCSD 170 (720)
Q Consensus 166 g~a~~ 170 (720)
+.+..
T Consensus 260 ~Q~V~ 264 (397)
T 4gyi_A 260 PQMVS 264 (397)
T ss_dssp TTCEE
T ss_pred CCccc
Confidence 98744
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.3e-09 Score=115.80 Aligned_cols=120 Identities=10% Similarity=0.030 Sum_probs=93.4
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEE
Q 004989 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSIC 663 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~ 663 (720)
..+...+.+++..+..+.+.+|...|.+++|+|+|.++++++.|++|++||+.+. .++..+. +...+.+++
T Consensus 147 ~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~ 218 (433)
T 3bws_A 147 DVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL--------AYKATVDLTGKWSKILL 218 (433)
T ss_dssp EEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC--------CEEEEEECSSSSEEEEE
T ss_pred EEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc--------eEEEEEcCCCCCeeEEE
Confidence 4444455555554444456678899999999999999999999999999998765 2333333 456799999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCc
Q 004989 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 664 w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~ 712 (720)
|+|++..++++++.|++|++||+.+++.+.. +.+++|++.+..+..++.
T Consensus 219 ~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 219 YDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEE
T ss_pred EcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEEC
Confidence 9997664556777899999999999998876 789999999977776664
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-08 Score=109.43 Aligned_cols=120 Identities=8% Similarity=-0.027 Sum_probs=92.3
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i 659 (720)
++..+++...+.+++..+.+ ...|.+++|+|||++| ++++.|++|++||+.+. ..+..+.+...+
T Consensus 53 d~~i~v~d~~~~~~~~~~~~------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~--------~~~~~~~~~~~~ 118 (391)
T 1l0q_A 53 SNDVSIIDTATNNVIATVPA------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN--------TVAGTVKTGKSP 118 (391)
T ss_dssp GTEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------EEEEEEECSSSE
T ss_pred CCeEEEEECCCCeEEEEEEC------CCCccceEECCCCCEEEEEECCCCEEEEEECCCC--------eEEEEEeCCCCc
Confidence 33455666667777777764 2389999999999976 55567799999998875 234445556679
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCccc
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQE 714 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~-~~~~~~~ 714 (720)
.+++|+|+++.++++++.|++|++||+.+++.+.. +.+++|++.+..+ ..++-+.
T Consensus 119 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCC
Confidence 99999997654558999999999999999998876 6799999998655 6666553
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=98.84 E-value=1.4e-08 Score=111.60 Aligned_cols=100 Identities=9% Similarity=-0.089 Sum_probs=79.5
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC---cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEE-EEeCCCc
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~la-S~s~D~~ 680 (720)
+|...|.+++|+|||++||+++.|+ +|++||+.++. +.....+...+.+++|+|+++ +|| +++.|+.
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--------~~~l~~~~~~~~~~~~spdg~-~la~~~~~~g~ 246 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPDGS-KLAFALSKTGS 246 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTTSS-EEEEEECTTSS
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--------EEEeecCCCcccCEEEcCCCC-EEEEEEecCCC
Confidence 4578899999999999999999886 99999998752 222233456799999999765 565 7777765
Q ss_pred --EEEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004989 681 --VQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 --v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+||+.+++...- +.+++|+|.+..+.+++-+
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred ceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECC
Confidence 99999999986432 7899999999988877653
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=98.72 E-value=1e-07 Score=103.82 Aligned_cols=119 Identities=11% Similarity=0.056 Sum_probs=89.2
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004989 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
+-.+.+...+.+.+..+. .|...|.+++|+|||+++ ++++.|++|++||+.+. .++..+.....+.
T Consensus 191 ~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~--------~~~~~~~~~~~~~ 257 (433)
T 3bws_A 191 NAVHVFDLKTLAYKATVD-----LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK--------LEIRKTDKIGLPR 257 (433)
T ss_dssp TEEEEEETTTCCEEEEEE-----CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT--------EEEEECCCCSEEE
T ss_pred CEEEEEECCCceEEEEEc-----CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC--------cEEEEecCCCCce
Confidence 334555555556666654 347889999999999976 56668999999998765 2344455556799
Q ss_pred EEEEecCCCCEEEEEe--------CCCcEEEEECCCCcEEEE------EEEEeecCCce-EEEecCccc
Q 004989 661 SICWNSYIKSQIASSN--------FEGVVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGMFQE 714 (720)
Q Consensus 661 ~l~w~~~~~~~laS~s--------~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~-~~~~~~~~~ 714 (720)
+++|+|++ .+|++++ .||+|++||+.+++.+.. +.+++|++.+. ++..++.|.
T Consensus 258 ~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 258 GLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp EEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTT
T ss_pred EEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCC
Confidence 99999965 5788777 489999999999987765 67899999984 556655553
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=98.51 E-value=5.7e-07 Score=98.68 Aligned_cols=102 Identities=7% Similarity=-0.151 Sum_probs=77.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeC-CC--cEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGV-NK--KIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+|...+.+++|+|||++||+++. ++ +|.+||..+.. +..+ .+...+.+++|+|++ .+||+++.|
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~---------~~~l~~~~~~~~~~~~spdG-~~l~~~~~~ 331 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA---------PQRITWEGSQNQDADVSSDG-KFMVMVSSN 331 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC---------CEECCCSSSEEEEEEECTTS-SEEEEEEEC
T ss_pred CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC---------EEEEecCCCcccCeEECCCC-CEEEEEECc
Confidence 4556789999999999999988886 45 67777876541 1112 234568899999965 577777754
Q ss_pred ---CcEEEEECCCCcEEEE-----EEEEeecCCceEEEecCccc
Q 004989 679 ---GVVQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ---~~v~lWD~~tg~~~~~-----v~~v~~~~~~~~~~~~~~~~ 714 (720)
..|.+||+.+++...- +.+++|+|.+..+.+++-+.
T Consensus 332 ~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 332 GGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp SSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEET
T ss_pred CCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCC
Confidence 5899999999987432 78999999999988888765
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.1e-06 Score=100.10 Aligned_cols=97 Identities=8% Similarity=0.026 Sum_probs=76.3
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeC--CcccccccccccceEEecCCCCEEE
Q 004989 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC--DAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
...+.-.+.+++.++.. ++. +.+++|+|||++|++++.|++|++||+ .+. ..+..+.+......
T Consensus 161 V~v~D~~t~~~~~~i~~----g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--------~~~~~i~~g~~p~~ 226 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDT----GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--------TKVAEIKIGIEARS 226 (543)
T ss_dssp EEEEETTTCCEEEEEEC----STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------EEEEEEECCSEEEE
T ss_pred EEEEECCCceEEEEEec----Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC--------cEEEEEecCCCcce
Confidence 34455567777887763 122 899999999999999999999999998 554 23445555567899
Q ss_pred EEEec----CCCCEEEEEeC-CCcEEEEECCCCcEEEEE
Q 004989 662 ICWNS----YIKSQIASSNF-EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 662 l~w~~----~~~~~laS~s~-D~~v~lWD~~tg~~~~~v 695 (720)
|+|+| ++ .+|+++++ |++|+|||..|+++++++
T Consensus 227 va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 227 VESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp EEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred EEeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceee
Confidence 99999 65 58888885 899999999999998764
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=1.1e-06 Score=107.88 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=79.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC--
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG-- 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~-- 679 (720)
+.+|...|.+++|+|||++||+++.+++|++||+.++. ..... .+...|.+++|||++ .+||+++.++
T Consensus 374 l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~--------~~~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~ 444 (1045)
T 1k32_A 374 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--------PTVIERSREAMITDFTISDNS-RFIAYGFPLKHG 444 (1045)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------EEEEEECSSSCCCCEEECTTS-CEEEEEEEECSS
T ss_pred ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc--------eEEeccCCCCCccceEECCCC-CeEEEEecCccc
Confidence 34667889999999999999999999999999997752 22222 346678999999965 5788777654
Q ss_pred --------cEEEEECCCCcEEEE------EEEEeecCCceEEEecCc
Q 004989 680 --------VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 680 --------~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~ 712 (720)
+|++||+.+|+...- +.+++|++.+..+.+++-
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred cccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 999999999883321 688999999987776664
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=98.37 E-value=8.7e-07 Score=92.53 Aligned_cols=106 Identities=10% Similarity=-0.008 Sum_probs=74.1
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC-CcEEEeeCC--cccccccccccceEEecCCCCEEEEEEecC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECD--AIINENRDIHYPVVEMASRSKLSSICWNSY 667 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d-~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~ 667 (720)
+++++..+.+ ...+.+++|+|||++|++++.+ ++|++||+. ++. ...+..+.....+.+++|+|+
T Consensus 27 ~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~s~d 94 (343)
T 1ri6_A 27 ALTLTQVVDV------PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA------LTFAAESALPGSLTHISTDHQ 94 (343)
T ss_dssp CEEEEEEEEC------SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC------EEEEEEEECSSCCSEEEECTT
T ss_pred cEEEeeeEec------CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc------eeeccccccCCCCcEEEEcCC
Confidence 4455555544 5678899999999988888876 999999986 221 013334444447899999996
Q ss_pred CCCEEEEEe-CCCcEEEEEC---CCCcEEEE------EEEEeecCCceEEEe
Q 004989 668 IKSQIASSN-FEGVVQVGQV---LHLIYFSA------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 668 ~~~~laS~s-~D~~v~lWD~---~tg~~~~~------v~~v~~~~~~~~~~~ 709 (720)
+. +|+.++ .|++|.+||+ .+++.+.. +.+++|++.+..+..
T Consensus 95 g~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 145 (343)
T 1ri6_A 95 GQ-FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWV 145 (343)
T ss_dssp SS-EEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEE
T ss_pred CC-EEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEE
Confidence 54 555554 5899999999 44444444 578899998864433
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.34 E-value=2.4e-06 Score=86.63 Aligned_cols=100 Identities=8% Similarity=-0.053 Sum_probs=72.8
Q ss_pred CCeEEEEECCCCCEEE-EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 608 NLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~la-t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
..+.+++|+|||++|+ +++.|++++||++..... .......+...+.+++|+|++..++++++.|+.++||++
T Consensus 129 ~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 129 LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG------VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC------CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCccceEECCCCCEEEEEECCCCceEEEEEECCCC------cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEE
Confidence 3489999999999877 888999999999643211 111122335679999999976534445556999999998
Q ss_pred C-CCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 687 L-HLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 687 ~-tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
. .+..+.. +.+++|+|.+..+.+++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 203 RVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp ETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred CCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 6 4444443 7889999999988887765
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=3.8e-07 Score=93.26 Aligned_cols=95 Identities=12% Similarity=-0.025 Sum_probs=70.9
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-- 139 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-- 139 (720)
..+|..+|..+. |..+.++++ +.... ...|++||| .|.+|.+.+. +......++.+++.+|..||+
T Consensus 56 ~~~E~~~l~~l~~~~~vP~v~~-~~~~~---~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~ 125 (263)
T 3tm0_A 56 VEREKDMMLWLEGKLPVPKVLH-FERHD---GWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSID 125 (263)
T ss_dssp HHHHHHHHHHHTTTSCCCCEEE-EEEET---TEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcCCCCCeEEE-EEecC---CceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCC
Confidence 445566666653 566777887 44333 357999999 9999988641 122345788999999999998
Q ss_pred ---------------------------------------------------------CCceeccCCCCcEEEccCCceEE
Q 004989 140 ---------------------------------------------------------QGIVVHNVRPSCFVMSSFNHVSF 162 (720)
Q Consensus 140 ---------------------------------------------------------~gIvHrDLKP~NILl~~~~~vkl 162 (720)
.+++|+|++|.|||++..+.+.|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~l 205 (263)
T 3tm0_A 126 ISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGF 205 (263)
T ss_dssp CTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEE
T ss_pred cccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEE
Confidence 55899999999999976555679
Q ss_pred eecCcc
Q 004989 163 IESASC 168 (720)
Q Consensus 163 iDfg~a 168 (720)
+||+.+
T Consensus 206 IDwe~a 211 (263)
T 3tm0_A 206 IDLGRS 211 (263)
T ss_dssp CCCTTC
T ss_pred EEchhc
Confidence 999876
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.1e-06 Score=89.24 Aligned_cols=104 Identities=9% Similarity=-0.070 Sum_probs=76.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCC--
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFE-- 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D-- 678 (720)
+..+...|.+++|+|||++|+.++ .|+.++||++.... ..+..+. +...+.+++|+|++ .+||.++.|
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~ 239 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-------SSVERITDSAYGDWFPHPSPSG-DKVVFVSYDAD 239 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-------SCEEECCCCSEEEEEEEECTTS-SEEEEEEEETT
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-------CCcEEEecCCcccCCeEECCCC-CEEEEEEcCCC
Confidence 445578899999999999877666 59999999975321 1222222 24568899999965 577777765
Q ss_pred ---------CcEEEEECCCCcE--EEE-------EEEEeecCCceEEEecCccc
Q 004989 679 ---------GVVQVGQVLHLIY--FSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ---------~~v~lWD~~tg~~--~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+.|.+||+.+++. +.. +.+++|+|.+..+.+++.+.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999998865 332 56789999999888877654
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.31 E-value=3.9e-07 Score=106.81 Aligned_cols=96 Identities=11% Similarity=0.148 Sum_probs=75.4
Q ss_pred CeEEEEECCCCCEEEEeeC---------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 609 LVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.|.+++|||||++||+++. |++|+|||+.++.... ...+ ...+.+++|||++ +.||+++ |+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~------~~~l--~~~~~~~~~SPDG-~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR------GNEL--PRPIQYLCWSPVG-SKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC------SSCC--CSSBCCEEECSST-TCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc------ceec--CcccccceECCCC-CEEEEEE-CC
Confidence 3889999999999999887 7999999988762100 0111 2458899999965 5788876 89
Q ss_pred cEEEEECCCCcEEEE--------E-----------------EEEeecCCceEEEecCccc
Q 004989 680 VVQVGQVLHLIYFSA--------L-----------------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~--------v-----------------~~v~~~~~~~~~~~~~~~~ 714 (720)
+|++||+.+|++.+. + .+++|||.+..++++++|+
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~ 190 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC
Confidence 999999999887542 2 3899999999999999873
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.6e-06 Score=101.76 Aligned_cols=108 Identities=8% Similarity=-0.028 Sum_probs=76.5
Q ss_pred CCCeEEEEECCCCCEEEEeeC-CC-----cEEEeeCCcccccc-cccc--cc-----------eEE---ecCCCCEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGV-NK-----KIKVFECDAIINEN-RDIH--YP-----------VVE---MASRSKLSSIC 663 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~-d~-----~i~iwd~~~~~~~~-~~~~--~~-----------~~~---~~~~~~i~~l~ 663 (720)
...|.+++|+|||++||+++. |+ +|++||..++.... ...+ .| ..+ +.+...|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 99999987752110 0000 00 000 00002378999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCC---cEEE------EEEEEeecCCceEEEecCccceE
Q 004989 664 WNSYIKSQIASSNFEGVVQVGQVLHL---IYFS------ALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 664 w~~~~~~~laS~s~D~~v~lWD~~tg---~~~~------~v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||++ .+||+++. ++|.+||+.++ +... .+.+++|+|.+..+++++-+.+.
T Consensus 116 ~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~ 175 (741)
T 2ecf_A 116 WSPDA-QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLW 175 (741)
T ss_dssp ECTTS-SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEE
T ss_pred ECCCC-CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEE
Confidence 99965 58888875 99999999998 4332 18899999999998888755543
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=98.26 E-value=4.3e-06 Score=87.22 Aligned_cols=111 Identities=9% Similarity=-0.023 Sum_probs=75.4
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~ 669 (720)
+++.+..+.. ...+.+++|+|||++|++++ .+++|.+||+..+. ...++..+.....+.+++|+|++.
T Consensus 73 ~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~s~dg~ 141 (343)
T 1ri6_A 73 ALTFAAESAL------PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-----PVGVVDVVEGLDGCHSANISPDNR 141 (343)
T ss_dssp CEEEEEEEEC------SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-----EEEEEEEECCCTTBCCCEECTTSS
T ss_pred ceeecccccc------CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-----cccccccccCCCCceEEEECCCCC
Confidence 4555566553 23678999999999776555 48999999984210 012334444556799999999754
Q ss_pred CEEEEEe-CCCcEEEEECCC-CcEEE------------EEEEEeecCCce-EEEecCcc
Q 004989 670 SQIASSN-FEGVVQVGQVLH-LIYFS------------ALYCIVLNKLLI-IFRYGMFQ 713 (720)
Q Consensus 670 ~~laS~s-~D~~v~lWD~~t-g~~~~------------~v~~v~~~~~~~-~~~~~~~~ 713 (720)
+|++++ .|+.|.+||+.+ |+... .+.+++|+|.+. ++..+..+
T Consensus 142 -~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~ 199 (343)
T 1ri6_A 142 -TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN 199 (343)
T ss_dssp -EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT
T ss_pred -EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC
Confidence 566665 899999999988 65421 156789999987 44444333
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=98.24 E-value=1.1e-06 Score=100.39 Aligned_cols=98 Identities=11% Similarity=-0.091 Sum_probs=74.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEec-CCCCEEEEE--------EecCCCCE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMA-SRSKLSSIC--------WNSYIKSQ 671 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~--------w~~~~~~~ 671 (720)
+.+|...+.+++|+|||++||+++.++ +|++||+.++.. . .+. +...+..++ |+|++ .+
T Consensus 190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~ 259 (582)
T 3o4h_A 190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV--------E-DLELPSKDFSSYRPTAITWLGYLPDG-RL 259 (582)
T ss_dssp ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE--------E-ECCCSCSHHHHHCCSEEEEEEECTTS-CE
T ss_pred eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE--------E-EccCCCcChhhhhhccccceeEcCCC-cE
Confidence 345678899999999999999988898 999999876521 1 111 123344455 99987 79
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE----EEEEeecCCceEEEecCcc
Q 004989 672 IASSNFEGVVQVGQVLHLIYFSA----LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 672 laS~s~D~~v~lWD~~tg~~~~~----v~~v~~~~~~~~~~~~~~~ 713 (720)
+++++.|++++||++ |+.+.. +.+++|+ .+..+.+++-+
T Consensus 260 ~~~~~~~g~~~l~~~--g~~~~~~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 260 AVVARREGRSAVFID--GERVEAPQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp EEEEEETTEEEEEET--TEEECCCSSEEEEEEEE-TTEEEEEEEET
T ss_pred EEEEEcCCcEEEEEE--CCeeccCCCceEEEEec-CCEEEEEEcCC
Confidence 999999999999999 776633 7899999 77766655443
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.1e-05 Score=85.16 Aligned_cols=100 Identities=12% Similarity=-0.082 Sum_probs=70.7
Q ss_pred CCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecC----------CCCEEEEEEecCCCCEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMAS----------RSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----------~~~i~~l~w~~~~~~~laS~ 675 (720)
...+..|+|+|||++|++++ .+++|++||+..... . .++..+.. ...+.+++|+|+++ +++++
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~-~----~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~ 158 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA-L----TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID 158 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC-E----EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC-e----eecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe
Confidence 56789999999999888887 789999999853100 0 12222211 23488999999876 77777
Q ss_pred eCCCcEEEEECC-CCcEEEE----------EEEEeecCCce-EEEecCc
Q 004989 676 NFEGVVQVGQVL-HLIYFSA----------LYCIVLNKLLI-IFRYGMF 712 (720)
Q Consensus 676 s~D~~v~lWD~~-tg~~~~~----------v~~v~~~~~~~-~~~~~~~ 712 (720)
..++.|.+||+. +|+.... ...++|+|.+. ++..+..
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~ 207 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL 207 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC
Confidence 779999999998 6654321 45689999987 5554443
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=98.21 E-value=1.4e-06 Score=99.46 Aligned_cols=94 Identities=10% Similarity=-0.142 Sum_probs=74.3
Q ss_pred EEEEECCCCCEEEEeeCC----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC--cEEEE
Q 004989 611 CSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVG 684 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~--~v~lW 684 (720)
.+++|||||++||+++.| +.|++||+.++. ......+...+..++|||++ .+||+++.|+ +|.+|
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~--------~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG--------LRVFDSGEGSFSSASISPGM-KVTAGLETAREARLVTV 223 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC--------CEEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC--------ceEeecCCCccccceECCCC-CEEEEccCCCeeEEEEE
Confidence 799999999999998888 889999987652 12222345678999999965 5888888899 99999
Q ss_pred ECCCCcEEEE-------EEEEe--------ecCCceEEEecCccc
Q 004989 685 QVLHLIYFSA-------LYCIV--------LNKLLIIFRYGMFQE 714 (720)
Q Consensus 685 D~~tg~~~~~-------v~~v~--------~~~~~~~~~~~~~~~ 714 (720)
|+.+|+.. . +.+++ |+|.+.++.+++-|.
T Consensus 224 d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 224 DPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp CTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred cCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 99999877 4 34566 999997777766554
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.1e-05 Score=84.21 Aligned_cols=116 Identities=10% Similarity=0.033 Sum_probs=78.6
Q ss_pred hccccceEEeeeeccCCCCCCCCCeEEEEECCCCCE-EEEeeCCCc-EEEeeCCcccccccccccceEEecCCCCEEEEE
Q 004989 586 YLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGEL-FAAAGVNKK-IKVFECDAIINENRDIHYPVVEMASRSKLSSIC 663 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~-lat~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 663 (720)
.+...+.+++..+.. ...+.+++|+|||++ ++++..+++ |.+||+.... ...+.. ...+.......+++
T Consensus 112 v~d~~~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g-~~~~~~--~~~~~~~~~~~~~~ 182 (331)
T 3u4y_A 112 SYSFLKNKFISTIPI------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG-VLFDTG--QEFISGGTRPFNIT 182 (331)
T ss_dssp EEETTTTEEEEEEEC------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC-CEEEEE--EEEECSSSSEEEEE
T ss_pred EEECCCCCeEEEEEC------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCC-cEeecC--CccccCCCCccceE
Confidence 334445555665553 345689999999985 556566688 9999987421 011110 12233345689999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcE---EEE------EEEEeecCCce-EEEec
Q 004989 664 WNSYIKSQIASSNFEGVVQVGQVLHLIY---FSA------LYCIVLNKLLI-IFRYG 710 (720)
Q Consensus 664 w~~~~~~~laS~s~D~~v~lWD~~tg~~---~~~------v~~v~~~~~~~-~~~~~ 710 (720)
|+|+++.+++++..+++|.+||+.+++. +.+ +.+++|+|.+. ++..+
T Consensus 183 ~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 183 FTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp ECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEE
Confidence 9997654666777799999999999998 665 46789999988 34443
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=98.20 E-value=1.8e-06 Score=100.98 Aligned_cols=98 Identities=8% Similarity=-0.105 Sum_probs=75.0
Q ss_pred CeEEEEECCCCCEEEEeeCC---------CcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCC
Q 004989 609 LVCSLSFDRDGELFAAAGVN---------KKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
.|.+++|||||++||+++.+ +.|.|||+.++... ++.... +...+.+++|||++ ++||+++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------~l~~~~~~~~~~~~~~~SPdG-~~la~~~~- 133 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------SLDPPEVSNAKLQYAGWGPKG-QQLIFIFE- 133 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------ECCCTTCCSCCCSBCCBCSST-TCEEEEET-
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE------eccCCccccccccccEECCCC-CEEEEEEC-
Confidence 58999999999999999875 67889998775210 111111 23348899999965 57888874
Q ss_pred CcEEEEECCCCcEEEE-------E------------------EEEeecCCceEEEecCccc
Q 004989 679 GVVQVGQVLHLIYFSA-------L------------------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~-------v------------------~~v~~~~~~~~~~~~~~~~ 714 (720)
+.|.+||+.+|+..+. + .+++|||.+..+++++.|+
T Consensus 134 ~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 8999999999877653 1 5799999999999988774
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=3.8e-06 Score=95.65 Aligned_cols=89 Identities=7% Similarity=-0.058 Sum_probs=73.1
Q ss_pred ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC--CCCcEE
Q 004989 615 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV--LHLIYF 692 (720)
Q Consensus 615 f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~--~tg~~~ 692 (720)
|+|+|.++++++.|++|.+||..++ ..+..+.....+.+++|+|+ +.+|++++.|++|++||+ .|++++
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~--------~~~~~i~~g~~~~~v~~spd-g~~l~v~~~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSK--------KIVKVIDTGYAVHISRMSAS-GRYLLVIGRDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTC--------CEEEEEECSTTEEEEEECTT-SCEEEEEETTSEEEEEETTSSSCEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCc--------eEEEEEecCcccceEEECCC-CCEEEEECCCCeEEEEECcCCCCcEE
Confidence 8999999999999999999998776 23444443334899999996 469999999999999999 899988
Q ss_pred EE------EEEEeecC----CceEEEecCc
Q 004989 693 SA------LYCIVLNK----LLIIFRYGMF 712 (720)
Q Consensus 693 ~~------v~~v~~~~----~~~~~~~~~~ 712 (720)
.+ ..+++|+| .+..+..+++
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 87 57899999 8876665553
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=98.19 E-value=7.7e-07 Score=104.09 Aligned_cols=98 Identities=8% Similarity=-0.055 Sum_probs=74.3
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC----CEEEEEEecCCCCEEEEEeCC------
Q 004989 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS----KLSSICWNSYIKSQIASSNFE------ 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~i~~l~w~~~~~~~laS~s~D------ 678 (720)
.+.+++|+|||+++++ +.|++|++||..++. ....+.++. .|.+++|||++ ++||+++.|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~--------~~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~ 87 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNT--------STVLIEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQH 87 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC--------CEEEECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCc--------EEEEeccccccccccceEEECCCC-CEEEEEecCccceee
Confidence 4678999999998877 789999999987762 222333322 48999999964 588888764
Q ss_pred ---CcEEEEECCCCcEEE--E-------EEEEeecCCceEEEecCccceE
Q 004989 679 ---GVVQVGQVLHLIYFS--A-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ---~~v~lWD~~tg~~~~--~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+.|.|||+.+|+... . +.+++|||.+..+++++-..+.
T Consensus 88 ~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~ 137 (723)
T 1xfd_A 88 SYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIY 137 (723)
T ss_dssp CCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEE
T ss_pred cceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEE
Confidence 778899999998622 1 5678999999988887765443
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=98.18 E-value=6e-06 Score=85.85 Aligned_cols=78 Identities=9% Similarity=-0.039 Sum_probs=63.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
...+.+++|+|||++++++ +++|.+||+.+. ..+..+.....+.+++|+|++ ++|++++.|+.|++||+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--------ASIKRVPLPHSYYSVNVSTDG-STVWLGGALGDLAAYDA 308 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECTTS-CEEEEESBSSEEEEEET
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCC--------cCcceecCCCceeeEEECCCC-CEEEEEcCCCcEEEEEC
Confidence 4678899999999998888 799999998765 233334344568899999965 57787888999999999
Q ss_pred CCCcEEEEE
Q 004989 687 LHLIYFSAL 695 (720)
Q Consensus 687 ~tg~~~~~v 695 (720)
.+++.+.++
T Consensus 309 ~~~~~~~~~ 317 (337)
T 1pby_B 309 ETLEKKGQV 317 (337)
T ss_dssp TTCCEEEEE
T ss_pred cCCcEEEEE
Confidence 999988764
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.17 E-value=1.8e-06 Score=92.71 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=76.3
Q ss_pred hchhhhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|..+. +..+.+++. ++.+.......|+|||| .|..|.+.. ...++..+...++.+++..|..||+
T Consensus 82 ~~~~E~~~l~~L~~~~vpvP~~~~-~~~~~~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 82 AIEREYRVMDALAGTDVPVAKMYA-LCEDESVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp CHHHHHHHHHHHTTSSSCCCCEEE-EECCTTTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEE-ECCCCCccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhC
Confidence 3345666776665 445677777 55454433457899999 777764311 2237888999999999999999997
Q ss_pred ----------------------------------------------------------CCceeccCCCCcEEEccCCc--
Q 004989 140 ----------------------------------------------------------QGIVVHNVRPSCFVMSSFNH-- 159 (720)
Q Consensus 140 ----------------------------------------------------------~gIvHrDLKP~NILl~~~~~-- 159 (720)
.+++|+|++|.|||++.++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v 237 (359)
T 3dxp_A 158 VDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRV 237 (359)
T ss_dssp SCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCE
T ss_pred CCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcE
Confidence 36899999999999997653
Q ss_pred eEEeecCccc
Q 004989 160 VSFIESASCS 169 (720)
Q Consensus 160 vkliDfg~a~ 169 (720)
+.++||+.+.
T Consensus 238 ~~viDwe~a~ 247 (359)
T 3dxp_A 238 LAVLDWELST 247 (359)
T ss_dssp EEECCCTTCE
T ss_pred EEEECccccc
Confidence 6899999873
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=98.16 E-value=3.2e-06 Score=99.12 Aligned_cols=99 Identities=4% Similarity=-0.147 Sum_probs=75.7
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..|.+++|+|||++||+++. ++|++||+.+.... .......+...+.+++|||++ ++||+++ ++.|.+||+.
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~-----~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~ 180 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA-----AVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLA 180 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTT-----SCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETT
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcc-----eEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecC
Confidence 34789999999999999886 99999998765100 011111234679999999965 5888887 5799999999
Q ss_pred CCcEEEE-----------------------EEEEeecCCceEEEecCccc
Q 004989 688 HLIYFSA-----------------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 688 tg~~~~~-----------------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|+.... +.+++|||.+..+.+++.|.
T Consensus 181 ~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 181 SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 9877653 26789999999999888764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=2.2e-06 Score=100.05 Aligned_cols=106 Identities=12% Similarity=-0.036 Sum_probs=73.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc-----ccccc-cccccc-eEE-----ecCCCCEEEEEEecCCCCEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-----IINEN-RDIHYP-VVE-----MASRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~-----~~~~~-~~~~~~-~~~-----~~~~~~i~~l~w~~~~~~~la 673 (720)
+...|.+++|+|||++||++ .|+.|+|||+.+ +.... ...+.. +.. -.....+.+++|||++ .+||
T Consensus 119 ~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la 196 (706)
T 2z3z_A 119 TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLA 196 (706)
T ss_dssp CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEE
T ss_pred CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEE
Confidence 45678899999999999995 689999999876 41110 000000 000 0001125899999965 5888
Q ss_pred EEe---------------------------------CCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecC
Q 004989 674 SSN---------------------------------FEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 674 S~s---------------------------------~D~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~~ 711 (720)
+++ .+..|.+||+.+|+.... +.+++|+|.+..+.+++
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 887 346899999999976432 78999999999888766
Q ss_pred cc
Q 004989 712 FQ 713 (720)
Q Consensus 712 ~~ 713 (720)
.+
T Consensus 277 ~~ 278 (706)
T 2z3z_A 277 VN 278 (706)
T ss_dssp EC
T ss_pred eC
Confidence 55
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.15 E-value=9.5e-07 Score=103.48 Aligned_cols=96 Identities=5% Similarity=0.018 Sum_probs=72.6
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC----CEEEEEEecCCCCEEEEEeC---------
Q 004989 611 CSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS----KLSSICWNSYIKSQIASSNF--------- 677 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~i~~l~w~~~~~~~laS~s~--------- 677 (720)
.+++|+|||++++++ .|++|++||..++. +...+.++. .|.+++|||++ ++||+++.
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~--------~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~ 88 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQ--------SYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSY 88 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCC--------EEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCc--------EEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeec
Confidence 378999999877776 59999999987762 222222221 38999999965 58887765
Q ss_pred CCcEEEEECCCCcEE---E---EEEEEeecCCceEEEecCccceE
Q 004989 678 EGVVQVGQVLHLIYF---S---ALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 678 D~~v~lWD~~tg~~~---~---~v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++|+|||+.+|+.+ . .+.+++|||.+..+++++-..+.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~ 133 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIY 133 (719)
T ss_dssp EEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEE
T ss_pred ceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEE
Confidence 799999999999873 2 17889999999988887644443
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.5e-05 Score=83.59 Aligned_cols=111 Identities=8% Similarity=-0.003 Sum_probs=76.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEe-eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~ 668 (720)
.+.+++..+..+ -.++...+.+++|+|||++++.+ ..++.|.+||..+.. .+..+.... -.+++|+|++
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~-~~~~~~s~dg 283 (353)
T 3vgz_A 214 ADNKILSRKKLL-DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN--------ILAKVAAPE-SLAVLFNPAR 283 (353)
T ss_dssp TTTEEEEEEECC-CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC--------EEEEEECSS-CCCEEEETTT
T ss_pred CCCeEEEEEEcC-CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------EEEEEEcCC-CceEEECCCC
Confidence 344555554421 12345678999999999965544 456999999987651 222222222 2579999976
Q ss_pred CCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCce-EEEec
Q 004989 669 KSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYG 710 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~-~~~~~ 710 (720)
+.+++++..|++|.+||+.+++.+.. .++++|++.+. ++.++
T Consensus 284 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 284 NEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEE
Confidence 65566666799999999999998876 68899999887 44443
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.6e-05 Score=82.95 Aligned_cols=113 Identities=10% Similarity=0.022 Sum_probs=75.0
Q ss_pred hccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEe-eCCCcEEEeeCCcccccccccccceEEecCCCC-EEEEE
Q 004989 586 YLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMASRSK-LSSIC 663 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-i~~l~ 663 (720)
.+...+.+++..+.. +...+ +++|+|||++++++ ..+++|.+||..+.. .+...+..... ..+++
T Consensus 24 ~~d~~~~~~~~~~~~-----~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~ 90 (331)
T 3u4y_A 24 FFSTDTLEILNQITL-----GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP-------PKVVAIQEGQSSMADVD 90 (331)
T ss_dssp EEETTTCCEEEEEEC-----CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS-------CEEEEEEECSSCCCCEE
T ss_pred EEeCcccceeeeEEc-----cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc-------eeEEecccCCCCccceE
Confidence 333444555555542 13445 99999999965544 448999999987652 11333333333 44499
Q ss_pred EecCCCCEEEEEeCC-C--cEEEEECCCCcEEEE------EEEEeecCCce-EEEecCc
Q 004989 664 WNSYIKSQIASSNFE-G--VVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGMF 712 (720)
Q Consensus 664 w~~~~~~~laS~s~D-~--~v~lWD~~tg~~~~~------v~~v~~~~~~~-~~~~~~~ 712 (720)
|+|++ .+|+++..+ + +|.+||+.+++.+.. ..+++|+|.+. ++..+..
T Consensus 91 ~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 91 ITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp ECTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEET
T ss_pred ECCCC-CEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecC
Confidence 99965 577755444 2 999999999998876 57899999986 5554443
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=98.12 E-value=7.1e-06 Score=85.26 Aligned_cols=109 Identities=8% Similarity=-0.017 Sum_probs=75.9
Q ss_pred ccccceEEeeeeccCCCCCCCC-CeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEecCC------CC
Q 004989 587 LSFSKLRVKADLNQGDLLNSSN-LVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR------SK 658 (720)
Q Consensus 587 ~~~~~~~~~~~l~~~~~~~~~~-~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~ 658 (720)
+...+.+++..+..+ +.. .+.+++|+|||++ +++++.++.|.+||..++. .+..+... ..
T Consensus 16 ~d~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 16 IDTEKMAVDKVITIA----DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--------TLGRIDLSTPEERVKS 83 (337)
T ss_dssp EETTTTEEEEEEECT----TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--------EEEEEECCBTTEEEEC
T ss_pred EECCCCcEEEEEEcC----CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--------eEeeEEcCCccccccc
Confidence 334455666666531 111 4788999999975 5777778999999987651 22222211 15
Q ss_pred EEEEEEecCCCCEEEEEe------------CCCcEEEEECCCCcEEEE------EEEEeecCCceEEE
Q 004989 659 LSSICWNSYIKSQIASSN------------FEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFR 708 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s------------~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~ 708 (720)
+.+++|+|++ .+|+.++ .|+.|.+||+.+++.+.. +.+++|++.+..+.
T Consensus 84 ~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 150 (337)
T 1pby_B 84 LFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLY 150 (337)
T ss_dssp TTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEE
T ss_pred ccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEE
Confidence 6789999965 4777775 579999999999988776 46788998886443
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=3.4e-05 Score=80.85 Aligned_cols=109 Identities=8% Similarity=0.133 Sum_probs=78.3
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-----CCCCEEEEEE
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-----SRSKLSSICW 664 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~w 664 (720)
.+.+++..+. .+...+.+++|+|||+++++++.++.|.+||..+.. .+..+. ....+.+++|
T Consensus 172 ~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 172 GNIKLKTAIQ-----NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK--------ILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp TTTEEEEEEC-----CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE--------EEEEEECCCSSSCCCEEEEEE
T ss_pred CCCceEEEec-----CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe--------EEEEEEcCCCCCCcccceEEE
Confidence 3455555554 124557899999999999999999999999987652 121111 2345889999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCcEEEEE-----EEEeecCCce-EEEecC
Q 004989 665 NSYIKSQIASSNFEGVVQVGQVLHLIYFSAL-----YCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 665 ~~~~~~~laS~s~D~~v~lWD~~tg~~~~~v-----~~v~~~~~~~-~~~~~~ 711 (720)
+|+++.+++++..++.|.+||+.+++.+..+ .+++|++.+. ++..+.
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEET
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEEC
Confidence 9976644555555699999999999988774 4788888876 455543
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.05 E-value=6.7e-06 Score=96.28 Aligned_cols=101 Identities=10% Similarity=0.021 Sum_probs=75.0
Q ss_pred CCCCCeEEEEECCCCCEEE-----EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 605 NSSNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~la-----t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
+|...+.+++|||||++|| +|+.+.+|+|||+.++.....+ + +. ..+...++|+|++ ..|+.+++|.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-~-----~~-~~~~~~~~wspDg-~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-V-----IE-GGKYATPKWTPDS-KGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-C-----BS-CCTTCCCEECTTS-SEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-c-----cC-cccccceEEecCC-CEEEEEEecC
Confidence 3456789999999999999 6677789999999876311000 1 11 1223689999965 5889888888
Q ss_pred c-------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCcc
Q 004989 680 V-------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 680 ~-------------v~lWD~~tg~----~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
+ |++||+.|++ .+.+ +.++.|++.+..+...+.+
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 7 9999999987 4432 6789999999887776654
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.02 E-value=6.9e-06 Score=96.92 Aligned_cols=121 Identities=11% Similarity=0.094 Sum_probs=82.4
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCc---------EEEeeCCcccccccccccceEEecC
Q 004989 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKK---------IKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~---------i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
..+...+-+....+....+..+.....+++|||||++||.++.+++ +.|||+.++.... ...+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~--------l~~~ 110 (740)
T 4a5s_A 39 LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT--------EERI 110 (740)
T ss_dssp EEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC--------SSCC
T ss_pred EEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE--------cccC
Confidence 3344444443333443333333333456899999999999998744 5699998762111 1123
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EE-----------------EEeecCCceEEEec
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LY-----------------CIVLNKLLIIFRYG 710 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------v~-----------------~v~~~~~~~~~~~~ 710 (720)
...+..++|||++ +.||.++ |+.|.+||+.+|+..+- ++ .+.|||++..+++.
T Consensus 111 ~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 111 PNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp CTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred CCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 5579999999965 5788875 79999999999876542 21 37899999999999
Q ss_pred Cccce
Q 004989 711 MFQEV 715 (720)
Q Consensus 711 ~~~~~ 715 (720)
++|+-
T Consensus 189 ~~d~~ 193 (740)
T 4a5s_A 189 QFNDT 193 (740)
T ss_dssp EEECT
T ss_pred EEccc
Confidence 88753
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.8e-05 Score=82.81 Aligned_cols=78 Identities=5% Similarity=-0.054 Sum_probs=62.2
Q ss_pred CCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+++|+| ||++++++ +++|.+||+.+. ..+..+.....+.+++|+|+++ +|++++.|++|++||
T Consensus 254 ~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 254 TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR--------KLIKAANLDHTYYCVAFDKKGD-KLYLGGTFNDLAVFN 322 (349)
T ss_dssp SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECSSSS-CEEEESBSSEEEEEE
T ss_pred CCcceeeEecCCCCCEEEEE--cCeEEEEECccC--------eEEEEEcCCCCccceEECCCCC-EEEEecCCCeEEEEe
Confidence 56789999999 99999888 899999998765 1233333344578999999754 566678899999999
Q ss_pred CCCCcEEEEE
Q 004989 686 VLHLIYFSAL 695 (720)
Q Consensus 686 ~~tg~~~~~v 695 (720)
+.+++.+.++
T Consensus 323 ~~~~~~~~~~ 332 (349)
T 1jmx_B 323 PDTLEKVKNI 332 (349)
T ss_dssp TTTTEEEEEE
T ss_pred ccccceeeee
Confidence 9999988764
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.5e-05 Score=83.43 Aligned_cols=92 Identities=5% Similarity=-0.087 Sum_probs=71.0
Q ss_pred EEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC--CEEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 004989 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS--KLSSICWNSYIKSQIASSNFEGVVQVGQVLHL 689 (720)
Q Consensus 612 sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg 689 (720)
.++|++++.++++++.+++|++||..+. ..+..+.... .+..++|+|+++.++++++.+++|.+||+.++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD--------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC 75 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT--------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC--------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC
Confidence 4578999999999999999999998775 1233333323 57899999976545667778999999999999
Q ss_pred cEEEEE-------------EEEeecCCceEEEecC
Q 004989 690 IYFSAL-------------YCIVLNKLLIIFRYGM 711 (720)
Q Consensus 690 ~~~~~v-------------~~v~~~~~~~~~~~~~ 711 (720)
+.+..+ .+++|+|.+..+..++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 110 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATV 110 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEc
Confidence 887653 4678999887666555
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=8.4e-06 Score=95.09 Aligned_cols=94 Identities=6% Similarity=-0.114 Sum_probs=72.6
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..|.+++|+|| .+++.+ .|++|++||+.+.. +.....+...+.+++|||++ ++||++ .|+.|.+||+.
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARK--------VTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTE--------EEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECB
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCc--------eEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecC
Confidence 56999999999 555544 36999999987651 22223345678999999965 588885 58999999999
Q ss_pred C-----CcEEEE-------E--------------EEEeecCCceEEEecCcc
Q 004989 688 H-----LIYFSA-------L--------------YCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 t-----g~~~~~-------v--------------~~v~~~~~~~~~~~~~~~ 713 (720)
+ |+.... + .++.|+|.+..+.++++|
T Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d 201 (706)
T 2z3z_A 150 KLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMD 201 (706)
T ss_dssp CTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEE
T ss_pred cccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEEC
Confidence 9 876652 3 688999999999999876
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=97.98 E-value=5.1e-05 Score=82.34 Aligned_cols=91 Identities=4% Similarity=-0.037 Sum_probs=70.1
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
.. |..|+| ||.+|++| .++.|++||+.+..... ..-.+...|.++.|.+. .+|.++.||+|.+||+
T Consensus 88 p~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~-------~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl 153 (388)
T 1xip_A 88 PD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFR-------TVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDL 153 (388)
T ss_dssp TT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEE-------EEEECSSCEEEEEECSS---EEEEEETTSEEEEEET
T ss_pred CC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccC-------ccceeecceeeEEecCC---CEEEEECCCCEEEEEc
Confidence 45 999999 99999998 89999999998764211 11122445788888763 3899999999999999
Q ss_pred CCCcEEEE---EEEEeecCCceEEEecC
Q 004989 687 LHLIYFSA---LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 687 ~tg~~~~~---v~~v~~~~~~~~~~~~~ 711 (720)
.+++.... |.|++||+.+..++.+.
T Consensus 154 ~~~~~~~~~~~Vs~v~WSpkG~~vg~~d 181 (388)
T 1xip_A 154 RTKSTKQLAQNVTSFDVTNSQLAVLLKD 181 (388)
T ss_dssp TTCCEEEEEESEEEEEECSSEEEEEETT
T ss_pred cCCccccccCCceEEEEcCCceEEEEcC
Confidence 98876543 99999999996665543
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2e-05 Score=96.77 Aligned_cols=101 Identities=5% Similarity=-0.113 Sum_probs=80.4
Q ss_pred CCCCCC-CeEEEEECCCCCEEEEeeCCCcEE-EeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSN-LVCSLSFDRDGELFAAAGVNKKIK-VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~-~V~sv~f~~dg~~lat~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+..|.. .|.+++|+ ||+.|++++.+..|. +||..+.. +.....+...+.+++|+|+ +.+||+++.|++
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~--------~~~l~~~~~~~~~~~~SpD-G~~la~~~~~~~ 401 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVFAMGVDRN-GKFAVVANDRFE 401 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEEEEEECTT-SSEEEEEETTSE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC--------ceEecCCccceeeeEECCC-CCEEEEECCCCe
Confidence 345566 89999999 999999999988888 88976541 1111133567999999996 569999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+.+|+.... +++++|+|.+..+++++.+
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecC
Confidence 99999999987654 4789999999988877653
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=97.93 E-value=6e-05 Score=79.97 Aligned_cols=106 Identities=16% Similarity=0.030 Sum_probs=70.0
Q ss_pred CCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccc----c-cccc-ccceEEecCCCCEEEEEEecCCCCEEEEEe-C
Q 004989 606 SSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIIN----E-NRDI-HYPVVEMASRSKLSSICWNSYIKSQIASSN-F 677 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~----~-~~~~-~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-~ 677 (720)
+...+.+++|+|||+++ +++..+++|++|++..... . .... ..+............++|+|+++ +|+.++ .
T Consensus 153 ~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~ 231 (361)
T 3scy_A 153 TMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK-FAYLINEI 231 (361)
T ss_dssp SSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETT
T ss_pred CCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC-EEEEEcCC
Confidence 34567999999999965 5555589999999865321 0 0000 00122333355688999999765 565555 6
Q ss_pred CCcEEEEECCCCcE--EEE----------EEEEeecCCceEE-EecCc
Q 004989 678 EGVVQVGQVLHLIY--FSA----------LYCIVLNKLLIIF-RYGMF 712 (720)
Q Consensus 678 D~~v~lWD~~tg~~--~~~----------v~~v~~~~~~~~~-~~~~~ 712 (720)
+++|.+||+.+|+. +.+ ..+++|+|.+..+ ..+.-
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 99999999998854 222 3488999999754 54443
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=2.7e-05 Score=91.37 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=71.8
Q ss_pred CCCeEEEEECCCCCEEEEeeCCC-----cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc-
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNK-----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV- 680 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~- 680 (720)
...+.+++|||||++||.++.++ +|+|||+.++. .+.......++.+++|+|++ ..|+.+++|+.
T Consensus 124 ~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~--------~~~~~~~~~~~~~~~wspDg-~~l~~~~~~~~~ 194 (710)
T 2xdw_A 124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK--------ELPDVLERVKFSCMAWTHDG-KGMFYNAYPQQD 194 (710)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE--------EEEEEEEEECSCCEEECTTS-SEEEEEECCCCS
T ss_pred CEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCcccccCcccceEEEEeCC-CEEEEEEECCcc
Confidence 44688999999999999776644 89999998762 11111112347789999965 57888888877
Q ss_pred ---------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCc
Q 004989 681 ---------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 681 ---------------v~lWD~~tg~----~~~~-------v~~v~~~~~~~~~~~~~~ 712 (720)
|.+||+.+++ .+.+ +.++.|++.+..+...+.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 9999999987 3322 568999999987776653
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=97.88 E-value=8.7e-05 Score=78.70 Aligned_cols=91 Identities=11% Similarity=0.063 Sum_probs=61.2
Q ss_pred CCCCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CCCcEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQ 682 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-~D~~v~ 682 (720)
+...+.+++|+|||++|++++. +++|.||++....... ..+..+.....+.+++|+|+++ +|++++ .+++|.
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~----~~~~~~~~g~~~~~~~~spdg~-~l~~~~~~~~~v~ 331 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL----TKVGYQLTGIHPRNFIITPNGK-YLLVACRDTNVIQ 331 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE----EEEEEEECSSCCCEEEECTTSC-EEEEEETTTTEEE
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE----EEeeEecCCCCCceEEECCCCC-EEEEEECCCCCEE
Confidence 3456789999999998755554 5899999986321100 1233333344678999999754 666665 689999
Q ss_pred EE--ECCCCcEEEE--------EEEEeec
Q 004989 683 VG--QVLHLIYFSA--------LYCIVLN 701 (720)
Q Consensus 683 lW--D~~tg~~~~~--------v~~v~~~ 701 (720)
|| |..+|+.... ..||.|.
T Consensus 332 v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 332 IFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 95 6678876543 5666664
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=97.87 E-value=1.5e-05 Score=93.99 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=69.2
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC------CEEEEEEecCCCCEEEEEeCC----
Q 004989 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS------KLSSICWNSYIKSQIASSNFE---- 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~i~~l~w~~~~~~~laS~s~D---- 678 (720)
...+++|+|||++|+++ |++|++||+.++. +...+.++. ....++|||++ ++||+++.|
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGN--------SSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQW 86 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCC--------EEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECS
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCc--------eEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeE
Confidence 35689999999999997 9999999998762 122222211 12458999965 588888876
Q ss_pred -----CcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004989 679 -----GVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 -----~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
+.+.|||+.+|++..- +..++|||.+..+++.+
T Consensus 87 r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~ 130 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW 130 (740)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE
T ss_pred EEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE
Confidence 4556999999986542 78999999999888875
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=5.6e-06 Score=83.84 Aligned_cols=91 Identities=8% Similarity=0.010 Sum_probs=63.3
Q ss_pred hhhhhhcccCCCCC--ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 65 HSDGVELTHGDHLR--NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~L~~l~Hpn--IV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..++..+.+.+ +.+++. +...+ ...+++||| .|.+|. ... .. ...++.+++..|..||+..
T Consensus 61 ~~E~~~l~~l~~~~~~vP~~~~-~~~~~---~~~~~v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~ 127 (264)
T 1nd4_A 61 QDEAARLSWLATTGVPCAAVLD-VVTEA---GRDWLLLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLD 127 (264)
T ss_dssp HHHHHHHHHHHTTTCCBCCEEE-EEECS---SCEEEEEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhCCCCCCeEEE-eccCC---CCCEEEEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCC
Confidence 35566666665444 445666 33333 247999999 888874 211 22 2356778888888888743
Q ss_pred ----------------------------------------------------------ceeccCCCCcEEEccCCceEEe
Q 004989 142 ----------------------------------------------------------IVVHNVRPSCFVMSSFNHVSFI 163 (720)
Q Consensus 142 ----------------------------------------------------------IvHrDLKP~NILl~~~~~vkli 163 (720)
++|+|++|.||+++.++.+.|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~li 207 (264)
T 1nd4_A 128 PATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFI 207 (264)
T ss_dssp GGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEEC
T ss_pred CCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEE
Confidence 9999999999999876556799
Q ss_pred ecCcc
Q 004989 164 ESASC 168 (720)
Q Consensus 164 Dfg~a 168 (720)
||+.+
T Consensus 208 D~~~a 212 (264)
T 1nd4_A 208 DCGRL 212 (264)
T ss_dssp CCTTC
T ss_pred cchhc
Confidence 99987
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=97.85 E-value=3.4e-05 Score=89.19 Aligned_cols=105 Identities=4% Similarity=-0.206 Sum_probs=72.8
Q ss_pred CCCCeEEEEECCCCCEEEEeeCC----------CcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS 674 (720)
|...+.+++|+|||+.||+++.| .+|.+||..+.... +...+.... .+...+..++|||++ .+||.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~SpDG-~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA--DRSAVRELSDDAHRFVTGPRLSPDG-RQAVW 204 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT--CGGGSEESSCSCSSEECCCEECTTS-SEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc--cCCceeEEEecCCCcccCceECCCC-CEEEE
Confidence 56788999999999999999887 68999998761000 000111111 234568889999965 58887
Q ss_pred EeCCC--------cEEEEECC-CC---cEEEE-------EEEEeecCCceEEEecCcc
Q 004989 675 SNFEG--------VVQVGQVL-HL---IYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 675 ~s~D~--------~v~lWD~~-tg---~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
++.|+ .|.+||+. +| +.... +++++|+|.+.++..++-+
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~ 262 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT 262 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTT
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCC
Confidence 77553 79999999 67 32221 6789999998866665554
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00017 Score=75.88 Aligned_cols=81 Identities=9% Similarity=0.014 Sum_probs=58.2
Q ss_pred CCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeC-CCcEEEE
Q 004989 608 NLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNF-EGVVQVG 684 (720)
Q Consensus 608 ~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~-D~~v~lW 684 (720)
..+.+++|+|||++| +++..+++|.|||+.... . ...+..+.. ...+.+++|+|++ .+|++++. +++|.||
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g-~----~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG-H----LTLIQQISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLY 313 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG-C----EEEEEEEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEE
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC-c----EEEeEEEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEE
Confidence 568999999999976 677779999999986320 0 012333333 4458899999965 46776665 5999999
Q ss_pred --ECCCCcEEEE
Q 004989 685 --QVLHLIYFSA 694 (720)
Q Consensus 685 --D~~tg~~~~~ 694 (720)
|..+|+....
T Consensus 314 ~~d~~tg~l~~~ 325 (347)
T 3hfq_A 314 ARDLTSGKLSLL 325 (347)
T ss_dssp EECTTTCCEEEE
T ss_pred EEeCCCCeEEec
Confidence 7778876643
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00015 Score=76.09 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=64.8
Q ss_pred CCeEEEEECCCCCEEEEeeCC---Cc--EEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC----
Q 004989 608 NLVCSLSFDRDGELFAAAGVN---KK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE---- 678 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d---~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D---- 678 (720)
..+.+++|+|||++||.++.+ +. |.+||+.++. +........ +.+++|+|++ ..||.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------~~~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~ 128 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------SKKILEAKN-IRSLEWNEDS-RKLLIVGFKRRED 128 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------EEEEEEESE-EEEEEECTTS-SEEEEEEECCCC-
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------eEEEEcCCC-ccceeECCCC-CEEEEEEccCCCc
Confidence 347889999999999988764 33 7777876541 121122233 9999999965 467666532
Q ss_pred -----------------------CcEEEEECCCCcEEEEE-----EEEeecCCceEEEecCc
Q 004989 679 -----------------------GVVQVGQVLHLIYFSAL-----YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 679 -----------------------~~v~lWD~~tg~~~~~v-----~~v~~~~~~~~~~~~~~ 712 (720)
..|.+||+.+|+.+..+ .+++|+|.+ ++..++.
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEEC
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEec
Confidence 57999999999874443 468899998 5555544
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00048 Score=73.46 Aligned_cols=95 Identities=6% Similarity=-0.137 Sum_probs=66.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeC-CCcEEEeeCC-cccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEe-CCC
Q 004989 606 SSNLVCSLSFDRDGELFAAAGV-NKKIKVFECD-AIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSN-FEG 679 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~-d~~i~iwd~~-~~~~~~~~~~~~~~~~~---~~~~i~~l~w~~~~~~~laS~s-~D~ 679 (720)
+...+.+++|+|||+++++++. +.+|++||+. ++.. .++..+. +...+..++|+|+++ +|+.++ .++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~------~~~~~~~~~~~g~~p~~~~~spdg~-~l~v~~~~~~ 215 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV------ELVGSVDAPDPGDHPRWVAMHPTGN-YLYALMEAGN 215 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE------EEEEEEECSSTTCCEEEEEECTTSS-EEEEEETTTT
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE------EEeeeEecCCCCCCCCEeEECCCCC-EEEEEECCCC
Confidence 4567999999999998777654 6899999987 4310 1222222 245689999999754 666665 478
Q ss_pred cEEEEECC--CCcEEE-----------------------EEEEEe-ecCCceEE
Q 004989 680 VVQVGQVL--HLIYFS-----------------------ALYCIV-LNKLLIIF 707 (720)
Q Consensus 680 ~v~lWD~~--tg~~~~-----------------------~v~~v~-~~~~~~~~ 707 (720)
+|.+|++. +|+... .+.+++ |+|.+..+
T Consensus 216 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 216 RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEE
Confidence 99999764 676421 256788 99998643
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0003 Score=75.34 Aligned_cols=81 Identities=11% Similarity=0.086 Sum_probs=60.7
Q ss_pred EEECCCCCEEEEeeC-----------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 613 LSFDRDGELFAAAGV-----------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 613 v~f~~dg~~lat~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
++|+|||..+..+.. +.+|.+||..+. ..+..+.... ..+++|+|+++ +|++++. ++|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--------~~v~~i~~~~-p~~ia~spdg~-~l~v~n~-~~v 327 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--------QRVARIPGRD-ALSMTIDQQRN-LMLTLDG-GNV 327 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--------EEEEEEECTT-CCEEEEETTTT-EEEEECS-SCE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--------cEEEEEecCC-eeEEEECCCCC-EEEEeCC-CeE
Confidence 689999876444322 458999998776 2444444444 89999999765 8888886 999
Q ss_pred EEEECCCC--cEEEEE-------EEEeecCCc
Q 004989 682 QVGQVLHL--IYFSAL-------YCIVLNKLL 704 (720)
Q Consensus 682 ~lWD~~tg--~~~~~v-------~~v~~~~~~ 704 (720)
.|||+.|+ +.+.++ +.++++|.+
T Consensus 328 ~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 328 NVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp EEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred EEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 99999999 988874 566777654
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00099 Score=67.87 Aligned_cols=93 Identities=12% Similarity=0.078 Sum_probs=71.6
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CCCEEEEEEecCCCCEEEEEeCCC-cEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RSKLSSICWNSYIKSQIASSNFEG-VVQ 682 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~i~~l~w~~~~~~~laS~s~D~-~v~ 682 (720)
...+.+|+|+|+|.++++.+.+++|++||.... .+..+.. -.....|+++|++ +++++...++ .|.
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---------~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---------YLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLT 232 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---------EEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEE
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC---------EEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEE
Confidence 457899999999999999889999999996432 1222222 2468899999964 6888887776 999
Q ss_pred EEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004989 683 VGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 683 lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
+||. +|+.+.+ .+++++++.+.+++++
T Consensus 233 ~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 233 IFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred EECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 9995 5666655 4588999999888875
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0011 Score=69.78 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=71.9
Q ss_pred CCCCCeEEEEECC-CCCEEEEee-CCCcEEEeeCCcccccccccccceEEecC-----------CCCEEEEEEecCCCCE
Q 004989 605 NSSNLVCSLSFDR-DGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMAS-----------RSKLSSICWNSYIKSQ 671 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~i~~l~w~~~~~~~ 671 (720)
++-....+|+|+| +|.++++.+ .+++|++||.... .+..+.. -.....|+++|+.+.+
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC---------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 4456789999999 899999987 7999999995422 1111111 1237899999976778
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004989 672 IASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 672 laS~s~D~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
+++...++.|++||..+|+.+.+ +++++|+|...+..+|
T Consensus 211 ~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g 258 (329)
T 3fvz_A 211 CVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNG 258 (329)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCC
Confidence 88888899999999999998876 5788899833333333
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0003 Score=74.91 Aligned_cols=73 Identities=8% Similarity=-0.024 Sum_probs=53.6
Q ss_pred EEEECCCCCEEEEeeC-CCc--EEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 612 SLSFDRDGELFAAAGV-NKK--IKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 612 sv~f~~dg~~lat~~~-d~~--i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..+|+|||++||.++. +++ |.+||..++. +.....+ ...+..++|+|++ ..||.++.|+.|.+||+.
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~--------~~~lt~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~ 110 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV--------ATQLTEGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLA 110 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTCE--------EEECCCSSCBCSSSCEECTTS-SEEEEEETTTEEEEEETT
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCCCc--------eEEeeeCCCCCccceEEcCCC-CEEEEEeCCCeEEEEECC
Confidence 3889999999999988 664 7888877652 1111112 2234467899965 589999999999999999
Q ss_pred CCcEEE
Q 004989 688 HLIYFS 693 (720)
Q Consensus 688 tg~~~~ 693 (720)
+|+...
T Consensus 111 ~g~~~~ 116 (388)
T 3pe7_A 111 TLEENV 116 (388)
T ss_dssp TCCEEE
T ss_pred CCccee
Confidence 998654
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00085 Score=69.95 Aligned_cols=97 Identities=11% Similarity=0.008 Sum_probs=73.9
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC----Cc
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE----GV 680 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D----~~ 680 (720)
+...+.+++|+|||++++++..++.|.+||..+.. ..... .....+.+++|+|++ .+++++..+ +.
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--------IKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGG 113 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC--------EEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCE
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc--------EEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCce
Confidence 35678999999999999999999999999987641 11111 234679999999965 577776666 68
Q ss_pred EEEEECCCCcEEE---------EEEEEeecCCceEEEecC
Q 004989 681 VQVGQVLHLIYFS---------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 681 v~lWD~~tg~~~~---------~v~~v~~~~~~~~~~~~~ 711 (720)
|.+||..+++... .++++++++.+.++..++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 9999998886531 178899999888887665
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00018 Score=84.80 Aligned_cols=95 Identities=14% Similarity=0.050 Sum_probs=68.5
Q ss_pred CCeEEEEECCCCCEEEEeeCC-----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc--
Q 004989 608 NLVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV-- 680 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~-- 680 (720)
..+.+++|||||++||.++.+ .+|+|||+.++. .+.......++..++|+|+ ..|+.+++|+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~--------~~~~~~~~~~~~~~~wspD--~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK--------PLADELKWVKFSGLAWLGN--DALLYSRFAEPKE 232 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC--------EEEEEEEEEESCCCEESTT--SEEEEEECCCC--
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCCccCCCceeccEEEECC--CEEEEEEecCccc
Confidence 468899999999999887654 579999998762 1111111223468899997 57777777765
Q ss_pred ------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCc
Q 004989 681 ------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 681 ------------v~lWD~~tg~----~~~~-------v~~v~~~~~~~~~~~~~~ 712 (720)
|.+|++.|++ .+.+ +.++.|++.+..++..+.
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 9999998886 3332 678999999977766554
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00018 Score=76.75 Aligned_cols=94 Identities=11% Similarity=0.049 Sum_probs=64.7
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCC-cccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEe---------
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECD-AIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSN--------- 676 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~-~laS~s--------- 676 (720)
..+..++|+|||++|++++.+ +|.+||+. ++.. ..+......+...+++|+|+++. +|++++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~------~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEI------VHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEE------EEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCE------EEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 457899999999999999888 99999975 3310 01111111123556899997643 466765
Q ss_pred ----CCCcEEEEECC-CCcEEEE-----------EEEEeecCCceEEE
Q 004989 677 ----FEGVVQVGQVL-HLIYFSA-----------LYCIVLNKLLIIFR 708 (720)
Q Consensus 677 ----~D~~v~lWD~~-tg~~~~~-----------v~~v~~~~~~~~~~ 708 (720)
.||+|++|++. .|+.... +.+++|+|.+..+.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEE
Confidence 69999999997 5654322 56899999986443
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0021 Score=65.43 Aligned_cols=103 Identities=8% Similarity=0.018 Sum_probs=74.7
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-------CCCCEEEEEEecCCCCEEE
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-------SRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------~~~~i~~l~w~~~~~~~la 673 (720)
|.-.++-..+.+|+|+++|.++++.+.+++|.+||.... .+..+. +...+.++++++..+.+++
T Consensus 23 g~~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~---------~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v 93 (286)
T 1q7f_A 23 GVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR---------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIV 93 (286)
T ss_dssp SSSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC---------EEEEECCBSSSTTCBSSEEEEEEETTTTEEEE
T ss_pred CCCCCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc---------EEEEecccCCCcccccCceEEEEEcCCCeEEE
Confidence 334455677999999999999999999999999997532 111111 1235889999644555555
Q ss_pred EEeC-CCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCcc
Q 004989 674 SSNF-EGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 674 S~s~-D~~v~lWD~~tg~~~~~--------v~~v~~~~~~~~~~~~~~~ 713 (720)
+... ++.|.+|| .+|+.+.+ .+++++++.+.+++.++.+
T Consensus 94 ~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 141 (286)
T 1q7f_A 94 TERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKV 141 (286)
T ss_dssp EECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTT
T ss_pred EcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCC
Confidence 5533 89999999 67777654 6789999998888876654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00039 Score=80.24 Aligned_cols=100 Identities=8% Similarity=-0.015 Sum_probs=67.8
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC--------cEEEeeCC-cccccccccccceEEecC-CCCEEEEEEecCCCCEEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNK--------KIKVFECD-AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~--------~i~iwd~~-~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS 674 (720)
.+...+.+++|||||++||.++.++ .|.+||+. ++. ...+.....+ ...+..++|+|+++ ++++
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-----~~~~~~l~~~~~~~~~~~~~spdg~-l~~~ 258 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-----FADTRTLLGGPEEAIAQAEWAPDGS-LIVA 258 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-----EEEEEEEEEETTBCEEEEEECTTSC-EEEE
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-----ccccEEeCCCCCceEcceEECCCCe-EEEE
Confidence 4457888999999999999888664 79999987 330 0011122222 46799999999876 8899
Q ss_pred EeCCC--cEEEEECCCCcEEEE---------------EEEEeecCCceEEEec
Q 004989 675 SNFEG--VVQVGQVLHLIYFSA---------------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 675 ~s~D~--~v~lWD~~tg~~~~~---------------v~~v~~~~~~~~~~~~ 710 (720)
++.|+ .|.+||+.+|+.... +.+++|++.+.++.++
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred ECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 99999 555567667765432 2356676666555544
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00015 Score=75.83 Aligned_cols=105 Identities=8% Similarity=0.012 Sum_probs=71.7
Q ss_pred hhhchhhhhhcccCC-CCCc--eecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGD-HLRN--QGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~-HpnI--V~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
..+..+|..+|..+. +..| .+++. ...........|+|||+ .|.+|.+... ..++..+...++.|++..|..
T Consensus 54 ~~~~~~E~~~l~~l~~~~~v~vP~~~~-~~~~~~~~~~~~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~ 129 (304)
T 3sg8_A 54 STNLFNEVNILKRIHNKLPLPIPEVVF-TGMPSETYQMSFAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSE 129 (304)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCCEEE-ECCCCSSCSCSCEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEe-ecCCCCCCCcceEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHH
Confidence 334556676776652 3222 23333 22222222245889999 8888865332 237888888999999999999
Q ss_pred HHH----------------------------------------------------------CCceeccCCCCcEEEcc--
Q 004989 137 AHS----------------------------------------------------------QGIVVHNVRPSCFVMSS-- 156 (720)
Q Consensus 137 LHs----------------------------------------------------------~gIvHrDLKP~NILl~~-- 156 (720)
||+ ..++|+|++|.||+++.
T Consensus 130 LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~ 209 (304)
T 3sg8_A 130 LHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEK 209 (304)
T ss_dssp HHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTT
T ss_pred HHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCC
Confidence 996 24699999999999997
Q ss_pred CCceEEeecCccc
Q 004989 157 FNHVSFIESASCS 169 (720)
Q Consensus 157 ~~~vkliDfg~a~ 169 (720)
.+.+.++||+.+.
T Consensus 210 ~~~~~~iD~~~~~ 222 (304)
T 3sg8_A 210 NTICGIIDFGDAA 222 (304)
T ss_dssp TEEEEECCCTTCE
T ss_pred CCEEEEEeCCCCc
Confidence 4567899999874
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0025 Score=66.82 Aligned_cols=98 Identities=15% Similarity=0.011 Sum_probs=74.1
Q ss_pred CCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEe------
Q 004989 607 SNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSN------ 676 (720)
Q Consensus 607 ~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~l~w~~~~~~~laS~s------ 676 (720)
-....+|+|+|+ |.++++...+++|++||..++. .+..+ .....+..++|+| +..+++.+
T Consensus 195 ~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~--------~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~ 264 (329)
T 3fvz_A 195 FSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE--------FVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGD 264 (329)
T ss_dssp ESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC--------EEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTC
T ss_pred cCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc--------EEEEEeccccCCCcceeeecC--CEEEEeCCCEEecc
Confidence 356899999999 8889999999999999987541 22222 1245688999999 32333332
Q ss_pred -CCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccc
Q 004989 677 -FEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 677 -~D~~v~lWD~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.+.+|++||..+|+.+.+ .++|++++.+.++++++.+.
T Consensus 265 ~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 265 QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC
Confidence 345999999999998877 57899999999998887654
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00078 Score=71.61 Aligned_cols=98 Identities=6% Similarity=-0.057 Sum_probs=67.7
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEE--ecCCCCEEEE---------
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIAS--------- 674 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w--~~~~~~~laS--------- 674 (720)
+...+.+++|+|||+.||.++.++.|.+||+.++... .+... +...+....| +|++ .+|+.
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~------~~~~~-~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~ 150 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN------VVYQV-PAEWVGYGTWVANSDC-TKLVGIEIRREDWV 150 (388)
T ss_dssp SCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE------EEEEC-CTTEEEEEEEEECTTS-SEEEEEEEEGGGCC
T ss_pred CCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce------eeeec-hhhcccccceeECCCC-CeeccccccCcccc
Confidence 3445557789999999999999999999998876211 11111 1233444444 7754 46663
Q ss_pred -------------EeCCCcEEEEECCCCcEEEE------EEEEeecC-CceEEEecC
Q 004989 675 -------------SNFEGVVQVGQVLHLIYFSA------LYCIVLNK-LLIIFRYGM 711 (720)
Q Consensus 675 -------------~s~D~~v~lWD~~tg~~~~~------v~~v~~~~-~~~~~~~~~ 711 (720)
.+.+..|.+||+.+|+...- +..++|+| .+..+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 151 PLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCH 207 (388)
T ss_dssp CCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred cccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEE
Confidence 33567899999999975543 67899999 887776644
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0013 Score=67.48 Aligned_cols=93 Identities=11% Similarity=-0.073 Sum_probs=71.9
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
.....+++|+|+|+ +++++..++.|.+||..+. .. ........+.+++|+|++ .++++...++.|.+||
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~--------~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LS--------PEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQR 96 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EE--------EEESSCSSEEEEEECTTC-CEEEEETTTTEEEEEC
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eE--------EEECCCCCcceeeECCCC-cEEEEecCCCeEEEEc
Confidence 46688999999998 8889999999999997654 11 111234568999999964 5777777779999999
Q ss_pred CCCCcEEEE-----------EEEEeecCCceEEEe
Q 004989 686 VLHLIYFSA-----------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 686 ~~tg~~~~~-----------v~~v~~~~~~~~~~~ 709 (720)
..+|+...- ++.+++++.+.++.+
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 998875432 346899999998886
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00047 Score=73.25 Aligned_cols=91 Identities=12% Similarity=0.007 Sum_probs=59.7
Q ss_pred EeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC---CcEEEeeCCcccccccccccceEEecCCCCE-EEEEEecCCC
Q 004989 594 VKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMASRSKL-SSICWNSYIK 669 (720)
Q Consensus 594 ~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i-~~l~w~~~~~ 669 (720)
.+..|..+....|...+.+++|+|||++||.++.. ..|.+||..++. +.....+.... .++.|+|++
T Consensus 22 ~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~--------~~~l~~~~~~~~~~~~~spdg- 92 (396)
T 3c5m_A 22 KVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ--------AVQLTEGKGDNTFGGFISTDE- 92 (396)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE--------EEECCCSSCBCTTTCEECTTS-
T ss_pred ceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc--------EEEeecCCCCccccceECCCC-
Confidence 34444422222344557889999999998877543 478888976652 11111122232 347899965
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEE
Q 004989 670 SQIASSNFEGVVQVGQVLHLIYFS 693 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~tg~~~~ 693 (720)
.+||.++.++.|.+||+.+|+...
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEE
Confidence 689998989999999999987654
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0019 Score=73.59 Aligned_cols=93 Identities=15% Similarity=0.008 Sum_probs=69.0
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCC--cccccccccccceEEecCCCCEEEEEEe-
Q 004989 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD--AIINENRDIHYPVVEMASRSKLSSICWN- 665 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~i~~l~w~- 665 (720)
-.+.++++++.. ...+..++|+|||+++.+++.|++|.+||+. +. ..+.++.....-..++|+
T Consensus 184 ~~t~~v~~~i~~------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--------~~v~~i~~G~~P~~ia~s~ 249 (567)
T 1qks_A 184 GSTYEIKTVLDT------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--------TTVAEIKIGSEARSIETSK 249 (567)
T ss_dssp TTTCCEEEEEEC------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------CEEEEEECCSEEEEEEECC
T ss_pred CCCCeEEEEEeC------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC--------cEeEEEecCCCCceeEEcc
Confidence 356677777765 3457799999999999889999999999985 33 123344333446799999
Q ss_pred ---cCCCCEEEEEe-CCCcEEEEECCCCcEEEEEE
Q 004989 666 ---SYIKSQIASSN-FEGVVQVGQVLHLIYFSALY 696 (720)
Q Consensus 666 ---~~~~~~laS~s-~D~~v~lWD~~tg~~~~~v~ 696 (720)
|+++ +|+.++ .+++|.|||..|.+.+++|.
T Consensus 250 ~~~pDGk-~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 250 MEGWEDK-YAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp STTCTTT-EEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCC-EEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 5655 555555 46999999999999988753
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00084 Score=70.27 Aligned_cols=102 Identities=7% Similarity=-0.100 Sum_probs=67.7
Q ss_pred hhchhhhhhcccCCCCC---ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLR---NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 62 ~r~~~e~~~L~~l~Hpn---IV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+..+|..+|..+.+.. |.+++. +... . ....|++||+ .|.+|.+..-. .++..+...++.++...|..|
T Consensus 54 ~~~~~E~~~L~~L~~~~~v~VP~~~~-~~~~-~-~g~~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~L 127 (306)
T 3tdw_A 54 DELNKEIQLLPLLVGCVKVNIPQYVY-IGKR-S-DGNPFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNEL 127 (306)
T ss_dssp HHHHHHHHHHHHHTTTCSSBCCCEEE-EEEC-T-TSCEEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEe-eccc-C-CCceEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHH
Confidence 35557777887776532 334444 2221 1 2245799999 88888763211 256666667777777777777
Q ss_pred HHC------------------------------------------------------------CceeccCCCCcEEEcc-
Q 004989 138 HSQ------------------------------------------------------------GIVVHNVRPSCFVMSS- 156 (720)
Q Consensus 138 Hs~------------------------------------------------------------gIvHrDLKP~NILl~~- 156 (720)
|+. .++|+|++|.||+++.
T Consensus 128 H~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~ 207 (306)
T 3tdw_A 128 SAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLN 207 (306)
T ss_dssp HHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTT
T ss_pred hcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecC
Confidence 752 3499999999999987
Q ss_pred --CCce-EEeecCccc
Q 004989 157 --FNHV-SFIESASCS 169 (720)
Q Consensus 157 --~~~v-kliDfg~a~ 169 (720)
++.+ .|+||+.+.
T Consensus 208 ~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 208 SRQTPLTGIIDFGDAA 223 (306)
T ss_dssp CSSCCEEEECCCTTCE
T ss_pred CCCCceEEEEehhhcC
Confidence 4564 799998773
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0019 Score=63.62 Aligned_cols=60 Identities=12% Similarity=0.010 Sum_probs=46.3
Q ss_pred CCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEccCCceEEe
Q 004989 104 DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSFI 163 (720)
Q Consensus 104 ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NILl~~~~~vkli 163 (720)
..+|.+.|...+.+++++++|.++.|.+.+|.-+-. ..-..+=+-|..|+|..+|.|.+.
T Consensus 32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~ 92 (229)
T 2yle_A 32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLA 92 (229)
T ss_dssp EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEEC
T ss_pred cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecc
Confidence 458999998888889999999999999999877621 111233345689999999998873
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0017 Score=68.98 Aligned_cols=93 Identities=10% Similarity=-0.146 Sum_probs=62.5
Q ss_pred CeEEEEECCCCCEEEEeeCC-----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEec-CCCCEEEEEe------
Q 004989 609 LVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS-YIKSQIASSN------ 676 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~-~~~~~laS~s------ 676 (720)
.|.+++|+|||++||.++.+ +.|.+||+.++.. ..+..+. ... ++|+| +++ +|++++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~------~~l~~~~---~~~-~~~s~~dg~-~l~~~~~~~p~~ 307 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN------EEVMVMP---PCS-HLMSNFDGS-LMVGDGCDAPVD 307 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE------EEEEECC---SEE-EEEECSSSS-EEEEEECCC---
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe------EEeeeCC---CCC-CCccCCCCc-eEEEecCCccee
Confidence 57889999999988877654 5599999876521 0111111 233 89999 665 777654
Q ss_pred ----------CCCcEEEEECCCCcEEE--E---------------EEEEeecCCceEEEecCc
Q 004989 677 ----------FEGVVQVGQVLHLIYFS--A---------------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 677 ----------~D~~v~lWD~~tg~~~~--~---------------v~~v~~~~~~~~~~~~~~ 712 (720)
.++.|.+||+.+|+... . +.+++|++.+..+.+.+-
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred eccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 34789999999886432 1 123688998876665543
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0026 Score=68.88 Aligned_cols=86 Identities=6% Similarity=-0.116 Sum_probs=63.9
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
...|.++.+.+.. ||+++.||+|.+||+..... .. ....|+|+||||.+ ++.|..||+|++|+.
T Consensus 126 ~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~--------~~---~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 126 EKPVFQLKNVNNT--LVILNSVNDLSALDLRTKST--------KQ---LAQNVTSFDVTNSQ---LAVLLKDRSFQSFAW 189 (388)
T ss_dssp SSCEEEEEECSSE--EEEEETTSEEEEEETTTCCE--------EE---EEESEEEEEECSSE---EEEEETTSCEEEEEE
T ss_pred ecceeeEEecCCC--EEEEECCCCEEEEEccCCcc--------cc---ccCCceEEEEcCCc---eEEEEcCCcEEEEcC
Confidence 4457888877543 99999999999999976521 11 13479999999965 678889999999999
Q ss_pred CCCcE--EE----------------EEEEEeecCCceEEE
Q 004989 687 LHLIY--FS----------------ALYCIVLNKLLIIFR 708 (720)
Q Consensus 687 ~tg~~--~~----------------~v~~v~~~~~~~~~~ 708 (720)
.++++ .. .|.+|.|.+....++
T Consensus 190 ~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 190 RNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp ETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred CCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 88774 22 278888876655443
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0013 Score=70.25 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=63.5
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec----
Q 004989 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA---- 654 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~---- 654 (720)
-.+.++++++.-| .+. .++|+|||+++.+++ .+++|.+||..+. .++.++.
T Consensus 38 ~~t~~~~~~i~~g-----~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~--------~~~~~i~~~~~ 102 (361)
T 2oiz_A 38 YTNGKFLGMVPTA-----FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL--------TFEKEISLPPK 102 (361)
T ss_dssp TTTCCEEEEEECC-----EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC--------CEEEEEEECTT
T ss_pred CCCCeEEEEecCC-----CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC--------cEEEEEEcCcc
Confidence 3456677777632 233 899999999887775 3778999998764 1222221
Q ss_pred ---CCCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEE
Q 004989 655 ---SRSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 655 ---~~~~i~~l~w~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~ 694 (720)
+......++++|+++ +|+.+.+ +++|.+||+.+++.+.+
T Consensus 103 ~~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp BCCBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred ccccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEE
Confidence 123456789999754 7776664 68999999999998876
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0026 Score=74.25 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=64.9
Q ss_pred CCCCeEEEEECCCCCEEE-----EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 606 SSNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~la-----t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+...|.+++|||||++|| +|+...+|+|||+.++. .+.......+...++|+ ++ +.|+.+++|..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~--------~~~~~~~~~k~~~~~Ws-Dg-~~l~y~~~~~~ 196 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ--------PLETPLKDVKFSGISWL-GN-EGFFYSSYDKP 196 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS--------EEEEEEEEEESCCCEEE-TT-TEEEEEESSCC
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC--------CCccccCCceeccEEEe-CC-CEEEEEEecCc
Confidence 345788999999999988 45555799999998862 11111111124678999 65 47777777754
Q ss_pred -------------EEEEECCCCc----EEEE--------EEEEeecCCceEEE
Q 004989 681 -------------VQVGQVLHLI----YFSA--------LYCIVLNKLLIIFR 708 (720)
Q Consensus 681 -------------v~lWD~~tg~----~~~~--------v~~v~~~~~~~~~~ 708 (720)
|.+|++.|++ ++.+ +.++.|++.+..+.
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 9999998876 3321 46788999998763
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0059 Score=64.06 Aligned_cols=111 Identities=6% Similarity=-0.030 Sum_probs=75.4
Q ss_pred hccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC------CE
Q 004989 586 YLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS------KL 659 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~i 659 (720)
...-.++++++++.. ......|+|++||.++++...+++|.+||..+.. .+..+.... ..
T Consensus 68 viD~~t~~~~~~i~~------~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~--------~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 68 AIDINTFKEVGRITG------FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE--------ITGYIECPDMDMESGST 133 (328)
T ss_dssp EEETTTCCEEEEEEC------CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE--------EEEEEECTTCCTTTCBC
T ss_pred EEECcccEEEEEcCC------CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe--------EEEEEEcCCccccCCCc
Confidence 334456677777643 3668999999999878887689999999988751 111121111 45
Q ss_pred EEEEEecCCCCEEEEEe-CCCcEEEEECCCCcEEEEE------EEEeecCCceEEEecCc
Q 004989 660 SSICWNSYIKSQIASSN-FEGVVQVGQVLHLIYFSAL------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s-~D~~v~lWD~~tg~~~~~v------~~v~~~~~~~~~~~~~~ 712 (720)
..+++ . ++.++++.. .+++|.+||..+++.+.++ ..+.+++.+.++...+-
T Consensus 134 ~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 134 EQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp CCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCC
T ss_pred ceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECC
Confidence 56777 2 443444433 5899999999999988773 46788887777766553
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0078 Score=61.55 Aligned_cols=91 Identities=10% Similarity=-0.103 Sum_probs=62.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCC-cccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECD-AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...++.++|+|||+++++.+.+++|.+||+. .+. . .....+. ......+.+++|++++ ++.+++ ++.|.+||
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~--~-~~~~~~~-~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE--T-EYQGVHF-TVEPGKTDGLRVDAGG-LIWASA--GDGVHVLT 243 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC--E-EEEEEEE-CCSSSCCCSEEEBTTS-CEEEEE--TTEEEEEC
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc--C-cCCCeEe-eCCCCCCCeEEECCCC-CEEEEc--CCeEEEEC
Confidence 4667899999999988888889999999986 221 0 0000011 1123446789999965 565555 78999999
Q ss_pred CCCCcEEEE------EEEEee-cCCce
Q 004989 686 VLHLIYFSA------LYCIVL-NKLLI 705 (720)
Q Consensus 686 ~~tg~~~~~------v~~v~~-~~~~~ 705 (720)
.. |+.+.. +++++| ++.+.
T Consensus 244 ~~-g~~~~~~~~~~~~~~~~f~~~d~~ 269 (296)
T 3e5z_A 244 PD-GDELGRVLTPQTTSNLCFGGPEGR 269 (296)
T ss_dssp TT-SCEEEEEECSSCCCEEEEESTTSC
T ss_pred CC-CCEEEEEECCCCceeEEEECCCCC
Confidence 96 777665 467888 45544
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.016 Score=57.89 Aligned_cols=98 Identities=7% Similarity=-0.013 Sum_probs=72.8
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..+.+|+++++|.++++...++.|.+||........ ....+...+.+|++++++ .+.++...++.|.+||..
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-------LPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-------CCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTT
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-------ecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCC
Confidence 467899999999998888888999999976541100 001122568899999965 677777778999999997
Q ss_pred CCcEEE-------EEEEEeecCCceEEEecCcc
Q 004989 688 HLIYFS-------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 tg~~~~-------~v~~v~~~~~~~~~~~~~~~ 713 (720)
+..... ..+++++++.+.+++.+..+
T Consensus 222 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 222 STTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp CSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred CCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 654332 17889999988888877665
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.012 Score=61.29 Aligned_cols=91 Identities=13% Similarity=-0.018 Sum_probs=65.5
Q ss_pred CCeEEEEECCCCCEEEEe---------eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 608 NLVCSLSFDRDGELFAAA---------GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~---------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
..|.+++| ||+++|.. +.+..|.+||..++. + ..+ ..+.+++|||++ .+||.++.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~--------~-~~l---~~~~~~~~SpDg-~~la~~~~~ 79 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA--------R-RFI---ENATMPRISPDG-KKIAFMRAN 79 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC--------E-EEE---ESCEEEEECTTS-SEEEEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc--------e-EEc---ccCCCeEECCCC-CEEEEEEec
Confidence 55788888 99987764 236789999987651 1 122 458899999965 577776654
Q ss_pred ---Cc--EEEEECCCCcEEEE-----EEEEeecCCceEEEecCcc
Q 004989 679 ---GV--VQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 679 ---~~--v~lWD~~tg~~~~~-----v~~v~~~~~~~~~~~~~~~ 713 (720)
+. |.+||+.+|+.... +.+++|+|.+..+.+.+.+
T Consensus 80 ~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~ 124 (347)
T 2gop_A 80 EEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFK 124 (347)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEEC
T ss_pred cCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEcc
Confidence 33 77789998876543 6789999999888887653
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.032 Score=57.76 Aligned_cols=99 Identities=10% Similarity=-0.027 Sum_probs=64.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCC----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC-----
Q 004989 607 SNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF----- 677 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~----- 677 (720)
.+.|.+++|+|||.+++++..+ +.|.+||..+..... .+........+.+++|+|++ .+++++..
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~-----~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD-----IIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTN 159 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE-----EECSSSSCCCEEEEEECTTS-CEEEEECCCBTTB
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE-----EEccCccCCcccceEECCCC-CEEEEeccccccC
Confidence 5679999999999998887766 799999987642110 00001123568999999965 56666554
Q ss_pred -CCcEEEEECCCCcEEEE------EEEEeecCCce-EEEecC
Q 004989 678 -EGVVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 678 -D~~v~lWD~~tg~~~~~------v~~v~~~~~~~-~~~~~~ 711 (720)
.+.|..||..+++.... ..+++|++.+. ++..++
T Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp CCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred CCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeC
Confidence 24455556666554321 57889999875 444443
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=96.26 E-value=0.022 Score=58.52 Aligned_cols=93 Identities=10% Similarity=0.101 Sum_probs=65.3
Q ss_pred CCeEEEEECCCCCE-EEEeeCCCcEEEeeCC--cccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 608 NLVCSLSFDRDGEL-FAAAGVNKKIKVFECD--AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
...+.++|+|||+. +++.+.+++|.+||+. ++... . ...+..+.. ......+++.+++ ++.++...++.|.+
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~--~-~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS--N-RRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIR 224 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE--E-EEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEE
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc--C-cEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEE
Confidence 45689999999985 5777778999999974 22100 0 011122221 3457899999965 67777666788999
Q ss_pred EECCCCcEEEE-------EEEEeec-CCc
Q 004989 684 GQVLHLIYFSA-------LYCIVLN-KLL 704 (720)
Q Consensus 684 WD~~tg~~~~~-------v~~v~~~-~~~ 704 (720)
||..+|+.+.+ ++|++|. +.+
T Consensus 225 ~d~~tG~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 225 LDPVTGKRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp ECTTTCCEEEEEECSSSBEEEEEEESGGG
T ss_pred EcCCCceEEEEEECCCCCceEEEEeCCCC
Confidence 99999998876 7899997 543
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0096 Score=64.27 Aligned_cols=92 Identities=16% Similarity=0.104 Sum_probs=63.9
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec--C
Q 004989 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA--S 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~ 655 (720)
.-.++++++++..| ... . ++|+|||+++..++ .+..|.+||..+. ..+..+. .
T Consensus 65 D~~t~~v~~~I~vG-----~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~--------~v~~~I~v~~ 129 (386)
T 3sjl_D 65 DGEAGRVIGMIDGG-----FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--------LPTADIELPD 129 (386)
T ss_dssp ETTTTEEEEEEEEC-----SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--------CEEEEEEETT
T ss_pred ECCCCeEEEEEECC-----CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--------eEEEEEECCC
Confidence 34578888888753 222 4 99999999765543 4788999999876 1232221 1
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEEE
Q 004989 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 656 ------~~~i~~l~w~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~v 695 (720)
...-..+.++|+++ +|..+.. +++|.|+|+.+++.+.+|
T Consensus 130 g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 130 APRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp CCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred ccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 11345689999765 5555543 789999999999999885
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.02 Score=58.68 Aligned_cols=82 Identities=9% Similarity=-0.115 Sum_probs=61.5
Q ss_pred CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC--CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-
Q 004989 618 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR--SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA- 694 (720)
Q Consensus 618 dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~- 694 (720)
.|++|++++.|++|.+||.+++ ..+..+... ..+.++.+.|+ +++|+ ++++.|..||. +|+.+-+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG--------~~~w~~~~~~~~~~~~~~~~pd-G~ilv--s~~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK--------EIVWEYPLEKGWECNSVAATKA-GEILF--SYSKGAKMITR-DGRELWNI 71 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT--------EEEEEEECCTTCCCCEEEECTT-SCEEE--ECBSEEEEECT-TSCEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCC--------eEEEEeCCCccCCCcCeEECCC-CCEEE--eCCCCEEEECC-CCCEEEEE
Confidence 5689999999999999998776 234444432 35889999995 56888 35788999999 8887765
Q ss_pred -------EEEEeecCCceEEEecC
Q 004989 695 -------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 695 -------v~~v~~~~~~~~~~~~~ 711 (720)
+.++.+.+.+.++..++
T Consensus 72 ~~~~~~~~~~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 72 AAPAGCEMQTARILPDGNALVAWC 95 (276)
T ss_dssp ECCTTCEEEEEEECTTSCEEEEEE
T ss_pred cCCCCccccccEECCCCCEEEEec
Confidence 45677778777776654
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.03 Score=57.32 Aligned_cols=93 Identities=2% Similarity=-0.110 Sum_probs=67.9
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
.....+++.+||.++++.+.+++|.+||.. + ..+..+.......++...++ +++|++++.++.|..+|..
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G--------~~~w~~~~~~~~~~~~~~~~-g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFATSEVREIAPN-G--------QLLNSVKLSGTPFSSAFLDN-GDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp GSCSCCEECTTSCEEEEETTTTEEEEECTT-S--------CEEEEEECSSCCCEEEECTT-SCEEEECBTTSEEEEECTT
T ss_pred ccccCceECCCCCEEEEecCCCEEEEECCC-C--------CEEEEEECCCCccceeEcCC-CCEEEEeCCCCeEEEEeCc
Confidence 345667899999999999999999999976 5 23444443445667788874 5688888888899999999
Q ss_pred CCcEEEEE-------------EEEeecCCceEEEec
Q 004989 688 HLIYFSAL-------------YCIVLNKLLIIFRYG 710 (720)
Q Consensus 688 tg~~~~~v-------------~~v~~~~~~~~~~~~ 710 (720)
||+.+-++ .++...+.+.+++.+
T Consensus 195 tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 195 SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 99987653 344445555555543
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.025 Score=59.19 Aligned_cols=103 Identities=11% Similarity=-0.007 Sum_probs=70.8
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC----------CcEEEeeCCcccccccccccceEEe--cCCCC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEM--ASRSK 658 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~ 658 (720)
+.+++.++.. ......++|+|||++++++..+ ++|.+||..+.. .+..+ .....
T Consensus 161 t~~~~~~i~~------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--------v~~~~~~~~g~~ 226 (328)
T 3dsm_A 161 TDKVVDELTI------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--------VEKQFKFKLGDW 226 (328)
T ss_dssp TTEEEEEEEC------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--------EEEEEECCTTCC
T ss_pred CCeEEEEEEc------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe--------EEEEEecCCCCC
Confidence 4455555543 2335688999999988877655 899999987651 11122 11236
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE---------EEEEEeecC-CceEEEec
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS---------ALYCIVLNK-LLIIFRYG 710 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~---------~v~~v~~~~-~~~~~~~~ 710 (720)
...++|+|+++ .|..++. +|.+||+.+++... ..++++++| .+.+++.+
T Consensus 227 p~~la~~~d~~-~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 227 PSEVQLNGTRD-TLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CEEEEECTTSC-EEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred ceeEEEecCCC-EEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 78999999665 5655543 99999999887531 268899998 77777776
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=96.00 E-value=0.042 Score=54.73 Aligned_cols=98 Identities=9% Similarity=0.056 Sum_probs=71.3
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..+.+++|+++|.++++...++.|.+||..+.... .....+...+.+|+++|++ +++++...++.|.+||..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-------VLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-------ECCCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTT
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-------eeccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecC
Confidence 56899999999999988888999999986543110 0011122357889999965 577777778999999998
Q ss_pred CCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 688 HLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
++..... ..++++++.+.+++.+..+
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCCEEEEETTT
T ss_pred CCceEeecccCCCCceEEEECCCCCEEEEECCC
Confidence 7765432 6788999988777766543
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=95.95 E-value=0.032 Score=56.95 Aligned_cols=101 Identities=7% Similarity=-0.110 Sum_probs=67.3
Q ss_pred CCeEEEEECCCCCEEEE-------eeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 608 NLVCSLSFDRDGELFAA-------AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat-------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
....+++|+++|.++++ +..++.|.+||..+....... .|- .......+.+++|+++.+.+++++. +..
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~--~~~-~~~~~~~~~~i~~~~~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC--KPE-VNGYGGIPAGCQCDRDANQLFVADM-RLG 93 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE--CCE-ETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEE--ecc-cCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence 45789999999999888 778999999997654211000 000 0001346899999996344455444 447
Q ss_pred EEEEECCCCcEEEE------------EEEEeecCCceEEEecCcc
Q 004989 681 VQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWD~~tg~~~~~------------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+||.. |+.... ++++++.+.+.++..++-+
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 137 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAG 137 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBC
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCc
Confidence 8899988 765321 5688898888887776543
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0022 Score=68.16 Aligned_cols=30 Identities=10% Similarity=0.180 Sum_probs=25.1
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCccc
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
..++|+|++|.|||++..+.+.|+||+.+.
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~ 251 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA 251 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence 478999999999999854457899998873
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.032 Score=59.84 Aligned_cols=86 Identities=3% Similarity=-0.145 Sum_probs=60.7
Q ss_pred eEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CC
Q 004989 610 VCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FE 678 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-~D 678 (720)
..-++|+|||..+-.+. .++.|-|+|..+. ..+..+.......++.|+|+++.+|+++. .+
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--------~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--------QTSSQISLGHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--------EEEEEEECCCCcCeEEECCCCCeEEEEEcCCC
Confidence 44588999998543332 2468999998775 23344443445789999997765777777 49
Q ss_pred CcEEEEECCCCcEEEEEEEEeecCC
Q 004989 679 GVVQVGQVLHLIYFSALYCIVLNKL 703 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~v~~v~~~~~ 703 (720)
++|.|||+.|++.+.++-.+.-.|.
T Consensus 341 ~~V~ViD~~t~~vv~~i~~vG~~P~ 365 (373)
T 2mad_H 341 EVLHIYDAGAGDQDQSTVELGSGPQ 365 (373)
T ss_pred CeEEEEECCCCCEEeeecCCCCCCc
Confidence 9999999999999987533443444
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.074 Score=55.85 Aligned_cols=87 Identities=9% Similarity=-0.017 Sum_probs=57.3
Q ss_pred CCCCCeEEEEECCCCCEEEEeeC-----CCcEEEeeCCccc-ccccccccceEEecCCCCEEEEEEecCCCCEEEEEe--
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAII-NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-- 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~-----d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-- 676 (720)
++-..+.+|+|+++|.++++... +.+|.+||+.+.. ........++ ....+.+..|+++|.++...++.+
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~--~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI--TLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTT--SCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhh--cccccccceEEEecCCCEEEEEcCcc
Confidence 45678999999999998776543 6899999987652 0000000000 011235689999986665555555
Q ss_pred -CCCcEEEEECCCCcEEE
Q 004989 677 -FEGVVQVGQVLHLIYFS 693 (720)
Q Consensus 677 -~D~~v~lWD~~tg~~~~ 693 (720)
.++.|.+||..+|+...
T Consensus 142 ~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp GGGCEEEEEETTTCCEEE
T ss_pred CCCCeEEEEECCCCCEEE
Confidence 68899999998876544
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.013 Score=59.30 Aligned_cols=94 Identities=9% Similarity=-0.049 Sum_probs=60.7
Q ss_pred hhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---
Q 004989 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--- 140 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~--- 140 (720)
+|...|..+. +--|.+++. +..++. ..|+|||+ .|.++.+.... .......+..++...|..||+.
T Consensus 68 ~E~~~l~~l~~~vPVP~v~~-~~~~~~---~~~lvme~l~G~~~~~~~~~-----~~~~~~~~~~~l~~~L~~Lh~~~~~ 138 (272)
T 4gkh_A 68 DEMVRLNWLTAFMPLPTIKH-FIRTPD---DAWLLTTAIPGKTAFQVLEE-----YPDSGENIVDALAVFLRRLHSIPVC 138 (272)
T ss_dssp HHHHHHHHHTTTSCCCCEEE-EEEETT---EEEEEEECCCSEEHHHHHHH-----CGGGHHHHHHHHHHHHHHHHTSCGG
T ss_pred HHHHHHHHhccCCCcCeEEE-EEEECC---eEEEEEEeeCCccccccccC-----CHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4555555442 112345555 334442 56999999 88888776522 1122344566666666666631
Q ss_pred -------------------------------------------------------CceeccCCCCcEEEccCCceEEeec
Q 004989 141 -------------------------------------------------------GIVVHNVRPSCFVMSSFNHVSFIES 165 (720)
Q Consensus 141 -------------------------------------------------------gIvHrDLKP~NILl~~~~~vkliDf 165 (720)
.++|+|+.|.|||++..+.+-|+||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDw 218 (272)
T 4gkh_A 139 NCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDV 218 (272)
T ss_dssp GCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCC
T ss_pred cCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEEC
Confidence 2789999999999987766779999
Q ss_pred Ccc
Q 004989 166 ASC 168 (720)
Q Consensus 166 g~a 168 (720)
+.+
T Consensus 219 e~a 221 (272)
T 4gkh_A 219 GRV 221 (272)
T ss_dssp TTC
T ss_pred ccc
Confidence 887
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.052 Score=61.75 Aligned_cols=83 Identities=6% Similarity=-0.071 Sum_probs=63.6
Q ss_pred ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC--CCcEE
Q 004989 615 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL--HLIYF 692 (720)
Q Consensus 615 f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~--tg~~~ 692 (720)
.+|++.++++...+++|.|||..+. ..+..+.....+.++.|+|++ .+|+.++.|+.|.+||+. +++.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~--------~v~~~i~~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v 233 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTV 233 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCC--------eEEEEEeCCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEe
Confidence 4466678999999999999998775 233344444467799999965 578888899999999996 88888
Q ss_pred EEE------EEEeec----CCceE
Q 004989 693 SAL------YCIVLN----KLLII 706 (720)
Q Consensus 693 ~~v------~~v~~~----~~~~~ 706 (720)
.++ ..++|+ |.+..
T Consensus 234 ~~i~~G~~P~~ia~s~~~~pDGk~ 257 (567)
T 1qks_A 234 AEIKIGSEARSIETSKMEGWEDKY 257 (567)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTE
T ss_pred EEEecCCCCceeEEccccCCCCCE
Confidence 774 678888 46643
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.12 Score=56.03 Aligned_cols=92 Identities=9% Similarity=0.009 Sum_probs=65.1
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC--cEEEEE
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~--~v~lWD 685 (720)
+....|+|+++|.++++...+++|++||..+.. ............ ++|+|++ +.|+.++.++ .|.+||
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~--------~~~~~~~~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK--------VTTVHPGFKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE--------EEEEEETCCBCB-CEECTTS-SEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE--------EEEeeccCCCCc-eeEecCC-CcEEEEecCCCceEEEEE
Confidence 468899999999999998889999999987641 111111122233 9999964 5888888876 788889
Q ss_pred CCCCcEEEE-----------EEEEeecC-CceEEEe
Q 004989 686 VLHLIYFSA-----------LYCIVLNK-LLIIFRY 709 (720)
Q Consensus 686 ~~tg~~~~~-----------v~~v~~~~-~~~~~~~ 709 (720)
..++..... .+++++++ .+.++..
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE
Confidence 876654322 45788888 6666664
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=95.35 E-value=0.037 Score=59.34 Aligned_cols=75 Identities=5% Similarity=-0.128 Sum_probs=53.3
Q ss_pred EEECCCCCEEE-Eee---C-----CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CCCcEE
Q 004989 613 LSFDRDGELFA-AAG---V-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQ 682 (720)
Q Consensus 613 v~f~~dg~~la-t~~---~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-~D~~v~ 682 (720)
++|+|||+.+- +.. . +..+.|||..+.. .+..+.......++.|+|+++.++++.. .+++|.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--------vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ--------TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------EEECCEEEEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe--------EEEEEECCCCcceEEECCCCCEEEEEccCCCCeEE
Confidence 68999998643 322 1 2345599988752 1222211224789999998877788888 599999
Q ss_pred EEECCCCcEEEEE
Q 004989 683 VGQVLHLIYFSAL 695 (720)
Q Consensus 683 lWD~~tg~~~~~v 695 (720)
|||+.|++.+.+|
T Consensus 341 VID~~t~kvv~~I 353 (368)
T 1mda_H 341 IYDAASDQDQSSV 353 (368)
T ss_dssp EEESSSCEEEEEC
T ss_pred EEECCCCcEEEEE
Confidence 9999999999884
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=95.28 E-value=0.33 Score=48.58 Aligned_cols=97 Identities=12% Similarity=-0.024 Sum_probs=68.7
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
+.+.+.+|+++++|.++++...++.|.+||.. .... .... .....+.++++++++ .+.++...++.|..|
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-------~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~ 83 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-------EYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRI 83 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-------EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-------EecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEE
Confidence 35789999999999998887778999999976 3100 0011 124568999999854 577776668899999
Q ss_pred ECCCCcEEE--------EEEEEeecCCceEEEecCc
Q 004989 685 QVLHLIYFS--------ALYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 685 D~~tg~~~~--------~v~~v~~~~~~~~~~~~~~ 712 (720)
|.. |+... .+.++++.+.+.++..++.
T Consensus 84 ~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 118 (299)
T 2z2n_A 84 TKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN 118 (299)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred CCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC
Confidence 986 43211 1678888887777776543
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=95.27 E-value=0.092 Score=56.24 Aligned_cols=90 Identities=12% Similarity=0.015 Sum_probs=62.0
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecC--
Q 004989 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMAS-- 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-- 655 (720)
...+++++.++..| .. ..++|+|||+++..+. .+.+|.+||..+.. ++..+..
T Consensus 53 D~~t~~~~~~i~~g-----~~--p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--------~~~~i~~~~ 117 (373)
T 2mad_H 53 DAGSGSILGHVNGG-----FL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--------PIADIELPD 117 (373)
T ss_pred ECCCCeEEEEecCC-----CC--CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--------EEEEEECCC
Confidence 34577888888753 12 2899999999876664 47889999987641 1221110
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEE
Q 004989 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 656 ------~~~i~~l~w~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~ 694 (720)
...-..+.|+|+++ +|+.+.. +++|.++| .+++.+.+
T Consensus 118 ~~~~~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ccccccCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 12235789999765 6665553 58899999 99998877
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=95.23 E-value=0.33 Score=48.52 Aligned_cols=95 Identities=14% Similarity=-0.022 Sum_probs=69.0
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|..||..... ....+. ....+.++++.|++ .+.++...++.|.+||
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGII--------KEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRIT 126 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE--------EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE--------EEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEEC
Confidence 4679999999999998888778999999975211 001111 24468999999854 5777777788999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecC
Q 004989 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 ~~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
. +|+.... +.++++.+.+.++..+.
T Consensus 127 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 127 D-DGKIREYELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred C-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 9 6654432 67888888877777654
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=95.16 E-value=0.093 Score=53.42 Aligned_cols=74 Identities=19% Similarity=0.165 Sum_probs=54.8
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
..+..++|+++|.++++...++.|.+||..++. .+..+. +...+.+++|+|++..+.+++..++.|..||+
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~--------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ--------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS--------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc--------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 567899999999999988889999999987441 111122 23568999999865435566666789999998
Q ss_pred CCC
Q 004989 687 LHL 689 (720)
Q Consensus 687 ~tg 689 (720)
.+.
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 753
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.13 Score=59.72 Aligned_cols=95 Identities=5% Similarity=-0.166 Sum_probs=59.7
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCC----cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC---C
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF---E 678 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~---D 678 (720)
+...+.+++|+|||++||.++.++ .|.+||..+. .+.....+...+....| ++++ ++++++. +
T Consensus 225 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--------~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~ 294 (695)
T 2bkl_A 225 DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--------DFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPR 294 (695)
T ss_dssp CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--------SCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTT
T ss_pred CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--------ceEEeecCCCceEEEEe-cCCc-EEEEECCCCCC
Confidence 456899999999999988887776 5666654322 11222223345566667 5566 7777763 5
Q ss_pred CcEEEEECCCCcE-----EE------EEEEEeecCCceEEEecC
Q 004989 679 GVVQVGQVLHLIY-----FS------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 ~~v~lWD~~tg~~-----~~------~v~~v~~~~~~~~~~~~~ 711 (720)
+.|.+||+.+++. +. .+..++|+ ...++.+.+
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred CEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 8999999988752 21 15666776 334444443
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=95.06 E-value=0.12 Score=60.00 Aligned_cols=106 Identities=6% Similarity=-0.123 Sum_probs=63.1
Q ss_pred CCCCeEEEEECCCCCEEEEeeC-----CCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC-
Q 004989 606 SSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE- 678 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D- 678 (720)
|...+.+++|+|||++|+.++. +..|.+||+.+..... ....+...+ .+...+.. .|+|+++.++.++..+
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI-TGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHS 308 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS-CSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc-CCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCC
Confidence 4567889999999999887765 6789999986510000 000012222 22333444 5888666444455433
Q ss_pred --CcEEEEECCCCc-----EEE------EEEEEeecCCceEEEecCcc
Q 004989 679 --GVVQVGQVLHLI-----YFS------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 679 --~~v~lWD~~tg~-----~~~------~v~~v~~~~~~~~~~~~~~~ 713 (720)
+.|.+||+.+++ .+. .+.+++|++...++.+.+-|
T Consensus 309 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 309 PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 369999998873 222 16677887655555554433
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=94.91 E-value=0.29 Score=49.90 Aligned_cols=93 Identities=11% Similarity=-0.085 Sum_probs=67.3
Q ss_pred CCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...-.+..|+|+ +.++.+...+++|..||..+.. +........+.+++|+|++. ++++. +..|.+||
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d 79 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---------VQRVTMDAPVSSVALRQSGG-YVATI--GTKFCALN 79 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---------EEEEECSSCEEEEEEBTTSS-EEEEE--TTEEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCc---------EEEEeCCCceEEEEECCCCC-EEEEE--CCeEEEEE
Confidence 345678999995 5578888889999999987652 11222345799999999655 66554 56899999
Q ss_pred CCCCcEEE-----------EEEEEeecCCceEEEecC
Q 004989 686 VLHLIYFS-----------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 ~~tg~~~~-----------~v~~v~~~~~~~~~~~~~ 711 (720)
..+|+... .++.+++.+.+.++...+
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~ 116 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTM 116 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecC
Confidence 99886432 157788999888777654
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=94.62 E-value=0.27 Score=50.06 Aligned_cols=92 Identities=8% Similarity=0.044 Sum_probs=63.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEE--ecCCCCEEEEEEe
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~i~~l~w~ 665 (720)
.+.++++++.|+ .......++|++||.++++.|. +.+|.++|..++. .+.. +..+.---.+++.
T Consensus 7 ~~~~vv~~~p~~----~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~--------v~~~i~l~~~~fgeGi~~~ 74 (266)
T 2iwa_A 7 YIVEVLNEFPHD----PYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK--------VENIHKMDDSYFGEGLTLL 74 (266)
T ss_dssp EEEEEEEEEECC----TTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC--------EEEEEECCTTCCEEEEEEE
T ss_pred cCceEEEEEECC----CCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC--------EEEEEecCCCcceEEEEEe
Confidence 357899999873 1245789999999988887775 6899999998762 1111 1112223356665
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004989 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg~~~~~v 695 (720)
. +.+.++.-.+++|-++|..|++.+.++
T Consensus 75 g--~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 75 N--EKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp T--TEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred C--CEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 3 334445556899999999999988875
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=94.57 E-value=0.22 Score=51.81 Aligned_cols=92 Identities=11% Similarity=-0.085 Sum_probs=64.6
Q ss_pred CCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 608 NLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
....+.+|+|++ .++.++..++.|.+||..+.. +........+.+++|+|++ .+++++ .++ |.+||.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~v~~i~~~~dg-~l~v~~-~~g-l~~~d~ 116 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGR---------KTVHALPFMGSALAKISDS-KQLIAS-DDG-LFLRDT 116 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---------EEEEECSSCEEEEEEEETT-EEEEEE-TTE-EEEEET
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---------EEEEECCCcceEEEEeCCC-eEEEEE-CCC-EEEEEC
Confidence 346788999985 567787788999999987641 1112223569999999965 466654 344 999999
Q ss_pred CCCcEEE-----------EEEEEeecCCceEEEecC
Q 004989 687 LHLIYFS-----------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 687 ~tg~~~~-----------~v~~v~~~~~~~~~~~~~ 711 (720)
.+|+... .++++++++.+.++..++
T Consensus 117 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 117 ATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp TTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeC
Confidence 8887432 267888988887766543
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=94.45 E-value=0.3 Score=49.99 Aligned_cols=92 Identities=5% Similarity=-0.071 Sum_probs=66.1
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
..+..+.+|+|||+ ++.++..++.|..||..... .........+.+++|+|++ +++++...++.|.+||
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~---------~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTV---------DVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSD 113 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCE---------EEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCE---------EEEeCCCCccceeeECCCC-CEEEEECCCCEEEEEC
Confidence 56788999999998 67888889999999863211 1111234568999999965 4666655668899999
Q ss_pred CCCCcEEEE-----------EEEEeecCCceEEEe
Q 004989 686 VLHLIYFSA-----------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 686 ~~tg~~~~~-----------v~~v~~~~~~~~~~~ 709 (720)
.. |+...- ++.+++.+.+.++.+
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence 86 653221 346889999988885
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=94.39 E-value=0.48 Score=49.17 Aligned_cols=93 Identities=10% Similarity=0.006 Sum_probs=61.4
Q ss_pred CCeEEEEECCCCCEE-EEeeCCCcEEEeeCC--cccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 608 NLVCSLSFDRDGELF-AAAGVNKKIKVFECD--AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
...+.++|+|||+.+ ++.+.++.|.+||+. ++.. ... ...+..+.. ......+++.+++ ++.++...++.|.+
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~-~~~-~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLP-TGK-AEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDR 255 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCB-SSC-CEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEE
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCc-ccC-ceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEE
Confidence 457899999999864 555667999999985 3200 000 001112221 3446789999865 56666655788999
Q ss_pred EECCCCcEEEE-------EEEEeec-CCc
Q 004989 684 GQVLHLIYFSA-------LYCIVLN-KLL 704 (720)
Q Consensus 684 WD~~tg~~~~~-------v~~v~~~-~~~ 704 (720)
||. +|+.+.. +++++|+ +.+
T Consensus 256 ~d~-~g~~~~~i~~~~~~~~~~af~g~d~ 283 (326)
T 2ghs_A 256 YDT-DGNHIARYEVPGKQTTCPAFIGPDA 283 (326)
T ss_dssp ECT-TCCEEEEEECSCSBEEEEEEESTTS
T ss_pred ECC-CCCEEEEEECCCCCcEEEEEecCCC
Confidence 999 6776654 7899997 654
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=94.13 E-value=0.66 Score=46.93 Aligned_cols=91 Identities=9% Similarity=0.148 Sum_probs=58.7
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEecCCCCE--EEEEEe
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKL--SSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i--~~l~w~ 665 (720)
...+++++..| +.......+.|+ |+.++.++|.++ +|+++|+.++. .+....-.... -.+...
T Consensus 29 ~~~~vv~~~ph----d~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk--------v~~~~~l~~~~FgeGit~~ 95 (262)
T 3nol_A 29 YDYQIVHSYPH----DTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK--------TLQQIELGKRYFGEGISDW 95 (262)
T ss_dssp EEEEEEEEEEC----CTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC--------EEEEEECCTTCCEEEEEEE
T ss_pred cceEEEEEecC----CCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCc--------EEEEEecCCccceeEEEEe
Confidence 35688888876 235667899999 788889989877 99999998862 11111111112 223333
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004989 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg~~~~~v 695 (720)
+..+....-.++++-++|..|++.+.++
T Consensus 96 --g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 96 --KDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp --TTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred --CCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 2223333335788888888888888774
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.14 Score=55.85 Aligned_cols=92 Identities=17% Similarity=0.121 Sum_probs=64.0
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecC--
Q 004989 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMAS-- 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-- 655 (720)
.-.++++++++.-|. .. .++|+|||+++..+. .++.|.++|..+.. .+..+.-
T Consensus 105 D~~t~~vv~~I~vG~-----~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--------vv~~I~v~g 169 (426)
T 3c75_H 105 DGSTGRILGMTDGGF-----LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--------PIADIELPD 169 (426)
T ss_dssp ETTTTEEEEEEEECS-----SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETT
T ss_pred ECCCCEEEEEEECCC-----CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--------EEEEEECCC
Confidence 346788999998542 23 799999999765554 47899999988761 2222210
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEEE
Q 004989 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 656 ------~~~i~~l~w~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~v 695 (720)
...-..+.++|+++ +|..+.. +++|.+.|+.+++.+.+|
T Consensus 170 ~~r~~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I 216 (426)
T 3c75_H 170 APRFLVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTFDRML 216 (426)
T ss_dssp CCCCCBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeEEEEE
Confidence 11234678999765 5655553 689999999999998874
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=94.09 E-value=0.055 Score=56.46 Aligned_cols=29 Identities=3% Similarity=0.102 Sum_probs=26.9
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcc
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.+++|+|++|.|||++.++.+.++||+.+
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 68999999999999988889999999987
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=94.04 E-value=0.99 Score=44.96 Aligned_cols=95 Identities=12% Similarity=-0.026 Sum_probs=68.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||.. .... ...+. ....+.++++.+++ ++.++...++.|.+||
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-------~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-------EFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLS 89 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-------EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-------EEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEEC
Confidence 4678999999999998888789999999976 3100 00111 23568999999854 5666666678999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecC
Q 004989 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 ~~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
.. |+...- +.++++.+.+.++..+.
T Consensus 90 ~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 122 (300)
T 2qc5_A 90 KK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQL 122 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CC-CCeEEecCCCCCCCCccceECCCCCEEEEcc
Confidence 88 654321 67888888877777654
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=94.01 E-value=0.23 Score=51.98 Aligned_cols=101 Identities=7% Similarity=0.016 Sum_probs=62.7
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcc--cccc---cccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAI--INEN---RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~--~~~~---~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.++.|+|+|||++|..+..++. +||.+.+. .... ......+....+......++++++ ++++++...++.|.+
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~-G~l~va~~~~~~V~~ 273 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD-HNIYVGDLAHSAIGV 273 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT-CCEEEEEGGGTEEEE
T ss_pred ccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC-CCEEEEccCCCeEEE
Confidence 4789999999998777766653 44544321 1000 000011122222334567899996 568888878899999
Q ss_pred EECCCCcEEEE--------EEEEeecCCceEEEecC
Q 004989 684 GQVLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 684 WD~~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
||..+|+.... ..+|+|.+.+.+++..+
T Consensus 274 ~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 274 ITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred EECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 99967753221 56889988777666544
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=93.62 E-value=0.093 Score=57.33 Aligned_cols=84 Identities=5% Similarity=0.022 Sum_probs=58.1
Q ss_pred EEEECCCCCE-EEEee---------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CCCc
Q 004989 612 SLSFDRDGEL-FAAAG---------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGV 680 (720)
Q Consensus 612 sv~f~~dg~~-lat~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-~D~~ 680 (720)
.++|+|||.. +++.+ .+++|-|+|..+. ..+..+.-...-..+.|+|+++.+|+++. .+++
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~--------kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG--------ERINKIELGHEIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC--------CEEEEEEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC--------eEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe
Confidence 3689999875 44432 2468999998876 12223322224789999997664788887 4999
Q ss_pred EEEEECCCCcEEEEEEEEeecCC
Q 004989 681 VQVGQVLHLIYFSALYCIVLNKL 703 (720)
Q Consensus 681 v~lWD~~tg~~~~~v~~v~~~~~ 703 (720)
|.|+|+.|++.+.+|--+.-.|.
T Consensus 395 VsVID~~t~kvv~tI~~vG~~P~ 417 (426)
T 3c75_H 395 LHIYDAATGEELRSVDQLGRGPQ 417 (426)
T ss_dssp EEEEETTTCCEEEEECCCSSSCC
T ss_pred EEEEECCCCCEEEEecCCCCCCc
Confidence 99999999999988633333333
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=93.21 E-value=0.18 Score=59.27 Aligned_cols=92 Identities=11% Similarity=-0.067 Sum_probs=59.6
Q ss_pred CeEEEEEC-CCCCEEEEeeC-----CCcEEEeeCCcc-cccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC---
Q 004989 609 LVCSLSFD-RDGELFAAAGV-----NKKIKVFECDAI-INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE--- 678 (720)
Q Consensus 609 ~V~sv~f~-~dg~~lat~~~-----d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D--- 678 (720)
.+.+.+|| |||++||-+.. ..+|+|+|+.++ .. .. ..+.. ....++|+|+++ .|+-.++|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~---~~~~~-----~~~~~~WspDg~-~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-IA---DKVSG-----TNGEIVWGPDHT-SLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-CC---CCEEE-----ECSCCEECSSTT-EEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-CC---ccccC-----ceeeEEEecCCC-EEEEEEECCCC
Confidence 57889999 99998884332 246999998876 31 01 11111 135789999765 55544555
Q ss_pred --CcEEEEECCCCc----EEEE------EEEEeecCCceEEEec
Q 004989 679 --GVVQVGQVLHLI----YFSA------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 679 --~~v~lWD~~tg~----~~~~------v~~v~~~~~~~~~~~~ 710 (720)
..|.+|++.+++ .+.+ ..++.|++.+..+...
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~ 288 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIG 288 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEE
Confidence 258888998874 3322 4577899998766543
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=92.79 E-value=2 Score=42.61 Aligned_cols=95 Identities=9% Similarity=-0.130 Sum_probs=68.2
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||.. +... ...+. ....+.++++.+++ .+.++...++.|..||
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-------~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~ 131 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-------EYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLT 131 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-------EEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEC
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-------EecCCCCCCCCccceECCCC-CEEEEccCCCeEEEEC
Confidence 4678999999999998887778999999976 3100 11111 23568999999854 5666666688999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecC
Q 004989 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 ~~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
.. |+.... .+++++.+.+.++..+.
T Consensus 132 ~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 132 AD-GTIYEYDLPNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred CC-CCEEEccCCCCCCCceeEEECCCCCEEEEec
Confidence 87 665432 67888888777776654
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=92.71 E-value=0.14 Score=59.79 Aligned_cols=55 Identities=16% Similarity=0.045 Sum_probs=42.8
Q ss_pred CEEEEEEecCCCCEEEEEeCC-C----cEEEEECCCCcEEEE----E--EEEeecCCceEEEecCccc
Q 004989 658 KLSSICWNSYIKSQIASSNFE-G----VVQVGQVLHLIYFSA----L--YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D-~----~v~lWD~~tg~~~~~----v--~~v~~~~~~~~~~~~~~~~ 714 (720)
.+..++|||+++ +||.++.+ | +|++||+.+|+.+.. + .+++|+|. ..+.+++.++
T Consensus 164 ~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 164 ALDAWAASDDGR-LLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp EEEEEEECTTSS-EEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCC
T ss_pred EEEeEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecC
Confidence 588999999764 66655533 3 699999999988764 2 57899999 8888888765
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=92.66 E-value=0.49 Score=51.13 Aligned_cols=94 Identities=5% Similarity=-0.086 Sum_probs=62.4
Q ss_pred EEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEe-c-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004989 613 LSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEM-A-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 613 v~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~-~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~t 688 (720)
++|+|+|++|..+..++ +|.+||...... .. .+... . ......+++++|.++.++ .++.++.|..||..+
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~----~~g~~~~~~~~~p~~iav~p~~g~ly-v~d~~~~I~~~d~~~ 249 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PT----RIGQLGSTFSGKIGAVALDETEEWLY-FVDSNKNFGRFNVKT 249 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EE----EEEECCTTSCSCCCBCEECTTSSEEE-EECTTCEEEEEETTT
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCce-eE----EeeeccchhcCCcEEEEEeCCCCeEE-EEECCCcEEEEECCC
Confidence 99999999888877766 788888654310 00 00011 1 234578899999655444 477789999999988
Q ss_pred CcEEEEE-------------E-EEeecC-CceEEEecCcc
Q 004989 689 LIYFSAL-------------Y-CIVLNK-LLIIFRYGMFQ 713 (720)
Q Consensus 689 g~~~~~v-------------~-~v~~~~-~~~~~~~~~~~ 713 (720)
+.... + + .++|++ .+.++..++..
T Consensus 250 ~~~~~-~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 250 QEVTL-IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp CCEEE-EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred CCEEE-EecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 76322 2 2 788888 57777766543
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=92.52 E-value=2.2 Score=42.60 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=55.5
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEecCCCCE--EEEEEec
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKL--SSICWNS 666 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i--~~l~w~~ 666 (720)
..+++++..| .....+..++|++ +.++.|.|.++ +|+++|+.++. .+....-.... -.+...
T Consensus 8 ~~~v~~~~ph----d~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk--------v~~~~~l~~~~fgeGi~~~- 73 (243)
T 3mbr_X 8 GYRVVKRYPH----DTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR--------ILQRAEVPPPYFGAGIVAW- 73 (243)
T ss_dssp CEEEEEEEEC----CTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC--------EEEEEECCTTCCEEEEEEE-
T ss_pred ceEEEEEcCC----CCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC--------EEEEEeCCCCcceeEEEEe-
Confidence 4578888876 3356788999997 78888888864 99999998762 11111111111 122332
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004989 667 YIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWD~~tg~~~~~v 695 (720)
+..+....-.++++-++|..|.+.+.++
T Consensus 74 -~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 74 -RDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp -TTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred -CCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 2223333345777888888887777764
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=92.45 E-value=1.7 Score=44.10 Aligned_cols=90 Identities=9% Similarity=0.083 Sum_probs=57.9
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~~ 669 (720)
..+++++..| +.......+.|+ ++.++.+.|.++.|+++|+.++.- +.. +...----.+.... .
T Consensus 42 ~~~Vv~~~ph----d~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv--------~~~~l~~~~FgeGit~~g--~ 106 (268)
T 3nok_A 42 VAHIIREYPH----ATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQP--------VWMERLGNIFAEGLASDG--E 106 (268)
T ss_dssp EEEEEEEEEC----CTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSC--------SEEEECTTCCEEEEEECS--S
T ss_pred ceEEEEEEcC----CCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcE--------EeEECCCCcceeEEEEeC--C
Confidence 3467777765 235667889998 578889999999999999988621 111 21111112344432 3
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEE
Q 004989 670 SQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~tg~~~~~v 695 (720)
.+....-.+++|.++|..|++.+.+|
T Consensus 107 ~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred EEEEEEccCCEEEEEECCcCcEEEEE
Confidence 34444446788888888888888774
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=92.38 E-value=0.2 Score=58.16 Aligned_cols=58 Identities=5% Similarity=-0.106 Sum_probs=39.0
Q ss_pred CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004989 629 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 629 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~v 695 (720)
+.|..||..++. .+....+...+....+...+ .+++.++.||.|++||+.||+.+.++
T Consensus 457 g~l~A~D~~tG~--------~~W~~~~~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQK--------AAWSVEHVSPWNGGTLTTAG-NVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTTE--------EEEEEEESSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCCCc--------EEeecCCCCCCcCcceEeCC-CEEEEECCCCcEEEEECCCCceeeee
Confidence 789999987761 22222222223333444433 47788899999999999999999874
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.32 E-value=0.089 Score=56.11 Aligned_cols=67 Identities=3% Similarity=-0.086 Sum_probs=40.8
Q ss_pred CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004989 618 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 618 dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
++.++++|+.|+.|..||..++. .+..... ..+.+..+.++ +.++++++.||.|..||..||+.+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~--------~~W~~~~-~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS--------IKWTLKE-DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC--------EEEEEEC-CCSCCCC------CCEEECTTTCCEEEC-----CCSEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--------EEEEecC-CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeee
Confidence 67889999999999999988762 2222222 33434444443 34677888999999999999987643
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=92.21 E-value=0.59 Score=47.75 Aligned_cols=92 Identities=8% Similarity=0.018 Sum_probs=58.4
Q ss_pred CCeEEEEECCCCCEEEE----eeC-------------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC
Q 004989 608 NLVCSLSFDRDGELFAA----AGV-------------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 670 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~ 670 (720)
+.+++++++|||.+++| |.. .+.|..||..++.. . .+. .-.....++|+|+++
T Consensus 131 ~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-----~-~~~---~~~~p~gl~~spdg~- 200 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-----Q-RMA---DLDHPNGLAFSPDEQ- 200 (305)
T ss_dssp SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-----E-EEE---EESSEEEEEECTTSS-
T ss_pred CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-----E-EEe---cCCCCcceEEcCCCC-
Confidence 45788999999999987 432 24677777644310 0 111 223467899999754
Q ss_pred EEEEEeCC------CcEEEEECCCCcEEEE--EE---------EEeecCCceEEEec
Q 004989 671 QIASSNFE------GVVQVGQVLHLIYFSA--LY---------CIVLNKLLIIFRYG 710 (720)
Q Consensus 671 ~laS~s~D------~~v~lWD~~tg~~~~~--v~---------~v~~~~~~~~~~~~ 710 (720)
.|+.++.+ +.|.+||+..+. +.. ++ .+.+.+.+.+.+.+
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~ 256 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS 256 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec
Confidence 55555554 789999998765 332 22 46667777666554
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=91.97 E-value=0.19 Score=53.78 Aligned_cols=85 Identities=11% Similarity=-0.015 Sum_probs=58.4
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCC-
Q 004989 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASR- 656 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~- 656 (720)
.-.++++++++.-|. .. .++|+|||+++..+. .+++|.+||..+. .++.++.-.
T Consensus 52 D~~t~~v~~~i~vG~-----~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~--------~vv~~I~v~~ 116 (368)
T 1mda_H 52 CAGCGVTLGHSLGAF-----LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--------LPIADIELPD 116 (368)
T ss_dssp ETTTTEEEEEEEECT-----TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--------CEEEEEEETT
T ss_pred ECCCCeEEEEEeCCC-----CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--------CEEEEEECCC
Confidence 446788999988531 23 699999999766654 4789999999886 233332110
Q ss_pred -------CCEEEEEEecCCCCEEEEEeC--CCcEEE--EECCC
Q 004989 657 -------SKLSSICWNSYIKSQIASSNF--EGVVQV--GQVLH 688 (720)
Q Consensus 657 -------~~i~~l~w~~~~~~~laS~s~--D~~v~l--WD~~t 688 (720)
..-..+.++|+++ +|+.+.+ +..|.| ||+.+
T Consensus 117 ~~~~~~g~~P~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SCSCCBSCCTTSEEECTTSS-CEEEEECSSSCEEEEEETTTEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh
Confidence 1235789999766 5555554 467999 99987
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=91.67 E-value=0.4 Score=51.53 Aligned_cols=77 Identities=6% Similarity=0.029 Sum_probs=54.0
Q ss_pred EEEEECCCCCEE-EEee---------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEE-eCCC
Q 004989 611 CSLSFDRDGELF-AAAG---------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS-NFEG 679 (720)
Q Consensus 611 ~sv~f~~dg~~l-at~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~-s~D~ 679 (720)
..++++|++..+ ++-. -..+|-+.|..+.. -+..+.-...+..|.++|+++.+|.++ ..++
T Consensus 283 q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--------v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~ 354 (386)
T 3sjl_D 283 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--------RLAKFEMGHEIDSINVSQDEKPLLYALSTGDK 354 (386)
T ss_dssp SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------EEEEEEEEEEECEEEECSSSSCEEEEEETTTT
T ss_pred ceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe--------EEEEEECCCCcceEEECCCCCeEEEEEcCCCC
Confidence 357789999753 3322 12578888987751 223322223578999999887666665 4599
Q ss_pred cEEEEECCCCcEEEEE
Q 004989 680 VVQVGQVLHLIYFSAL 695 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~v 695 (720)
+|.|+|+.|++.+.++
T Consensus 355 ~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 355 TLYIHDAESGEELRSV 370 (386)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCcEEEEe
Confidence 9999999999999885
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=91.36 E-value=5.4 Score=40.52 Aligned_cols=88 Identities=13% Similarity=0.085 Sum_probs=59.3
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC
Q 004989 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~ 668 (720)
....++++++.. ......++|+++|.++++....++|..||..... ...........++++.+++
T Consensus 19 ~~~~~~~~~~p~------~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~---------~~~~~~~~~p~gia~~~dG 83 (306)
T 2p4o_A 19 LAPAKIITSFPV------NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ---------QIHATVEGKVSGLAFTSNG 83 (306)
T ss_dssp CCCEEEEEEECT------TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE---------EEEEECSSEEEEEEECTTS
T ss_pred CCCceEeEeCCC------CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce---------EEEEeCCCCceeEEEcCCC
Confidence 355777787754 3568899999999998888788999999975431 1111223458899999975
Q ss_pred CCEEEEEe-CCC-cEEEEECCCCcEE
Q 004989 669 KSQIASSN-FEG-VVQVGQVLHLIYF 692 (720)
Q Consensus 669 ~~~laS~s-~D~-~v~lWD~~tg~~~ 692 (720)
. ++++.. .++ .|-.+|..+|+..
T Consensus 84 ~-l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 84 D-LVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp C-EEEEEECTTSCEEEEEECTTSCEE
T ss_pred c-EEEEeccCCcceEEEEcCCCCeEE
Confidence 5 444332 333 3556687888743
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=91.31 E-value=0.25 Score=57.41 Aligned_cols=58 Identities=7% Similarity=-0.085 Sum_probs=38.3
Q ss_pred CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004989 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 628 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
+++|..||+.++. .+........+..-.+... +.+|..++.||.|++||..||+.+-+
T Consensus 454 ~g~l~A~D~~tG~--------~~W~~~~~~~~~~g~~~ta-gglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 454 SGKLIAWDPVKQQ--------AAWEVPYVTIFNGGTLSTA-GNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp EEEEEEEETTTTE--------EEEEEEESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ceeEEEEECCCCC--------eEeEccCCCCccCccceEC-CCEEEEECCCCcEEEEECCCCcccee
Confidence 4778889987762 1222222222222244443 45888999999999999999999866
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=90.89 E-value=0.14 Score=55.75 Aligned_cols=30 Identities=7% Similarity=0.210 Sum_probs=26.7
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcc
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
+...++|+|++|.|||++.++ +.++||+.+
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a 259 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFS 259 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTC
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCccc
Confidence 457899999999999998776 999999887
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=89.69 E-value=0.54 Score=53.13 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=54.6
Q ss_pred CeEEEEECCCCCE-EEEeeCCCcEEEeeCCccc---ccccccccc-eEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 609 LVCSLSFDRDGEL-FAAAGVNKKIKVFECDAII---NENRDIHYP-VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 609 ~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~---~~~~~~~~~-~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
...+|.|+|||++ ++++..+.+|-|+|+++.. ....+.... +.+..-...-.-++|+|++ +...+.--|++|.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEE
Confidence 4568999999996 6777789999999998641 111111112 2233333456789999976 44455567999999
Q ss_pred EECCC
Q 004989 684 GQVLH 688 (720)
Q Consensus 684 WD~~t 688 (720)
||+.+
T Consensus 357 wdi~~ 361 (595)
T 1fwx_A 357 WNIED 361 (595)
T ss_dssp EEHHH
T ss_pred EEhhH
Confidence 99987
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 720 | ||||
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-12 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-12 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 8e-12 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-11 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-11 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 4e-11 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-11 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 6e-11 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 0.004 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 9e-11 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-10 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-10 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 5e-10 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 8e-10 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 9e-10 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-09 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-09 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-09 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-09 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-09 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 3e-09 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 0.002 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-09 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 5e-09 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 5e-09 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 6e-09 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 9e-09 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-08 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-08 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-08 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-08 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-08 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 5e-08 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 8e-08 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 9e-08 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-07 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-07 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-07 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-07 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 4e-07 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-07 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 9e-07 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-06 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 7e-04 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-06 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 5e-06 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 6e-06 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 7e-06 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 7e-06 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 7e-06 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-05 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-05 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-05 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-05 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-05 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-05 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 6e-05 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 7e-05 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-04 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-04 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 4e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 0.001 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 0.003 |
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.2 bits (161), Expect = 2e-12
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPP 328
+ T +Y SPE++ + SDI+ LG LL+EL P T + +R
Sbjct: 174 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 233
Query: 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
+ ++ E +L+ + RP + E+L++ +
Sbjct: 234 -IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.8 bits (160), Expect = 2e-12
Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T + +PE + D+Y G+ + E+ P+S + + + V P
Sbjct: 176 TPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASF 234
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
E + R + +LL F
Sbjct: 235 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.2 bits (156), Expect = 8e-12
Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T ++ +PE + DI+ LG++ E+ P+ + Q
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL--NEPRDSM 371
K F L + R ELLQ +FL +P S+
Sbjct: 239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSL 282
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 63.9 bits (155), Expect = 2e-11
Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 7/118 (5%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQL 330
+A+PE G PV +D++ +GVL + L PF GE T+ +++ +
Sbjct: 190 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSA 248
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEE 387
++ F LL +P+ R + + L+ +L + + +I +
Sbjct: 249 FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDS 306
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.8 bits (152), Expect = 3e-11
Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 17/155 (10%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--- 325
T +Y +PE L + D++ LGV+++ L C PF ++ R+
Sbjct: 174 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMG 232
Query: 326 ---LPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE----PRDSMEEREAA 377
P + +E LL EP+ R + E + ++ + P+ +
Sbjct: 233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVL 292
Query: 378 IELREQID--EEELLLEFLLLVQQRKQESAKKLQD 410
E +E+ + +EE+ + +Q KK++D
Sbjct: 293 KEDKERWEDVKEEMTSALATMRVDYEQIKIKKIED 327
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.0 bits (150), Expect = 4e-11
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 274 TNWYASPEELAGAPVSC-ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 329
T Y +PE L D++ G++L + P+ + + S + +
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN 227
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
K + +L PS R + ++ + + N+P
Sbjct: 228 PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.4 bits (151), Expect = 5e-11
Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 5/155 (3%)
Query: 260 KKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR 316
++ LL Y +PE VS A+D++ LG L++ L PF +
Sbjct: 152 RQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI 211
Query: 317 TMSSLRHRVLPPQLLLK-FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+ + + K EA F LL E R E LQ +L + + + +
Sbjct: 212 IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTK 271
Query: 375 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQ 409
+ + + ++V + ++
Sbjct: 272 VIRTLKHRRYYHTLIKKDLNMVVSAARISCGGAIR 306
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.1 bits (148), Expect = 6e-11
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 7/97 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T Y PE + G D++ LGVL +E PF + R P
Sbjct: 167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 226
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE 366
+ + A LL PS RP + E+L+ ++
Sbjct: 227 V---TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.3 bits (86), Expect = 0.004
Identities = 10/78 (12%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Query: 83 LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142
L G + + + G + + L K + D ++ + HS+ +
Sbjct: 71 LYGYFHDATRVYLILEYAPLGT--VYRELQKLSK-FDEQRTATYITELANALSYCHSKRV 127
Query: 143 VVHNVRPSCFVMSSFNHV 160
+ +++P ++ S +
Sbjct: 128 IHRDIKPENLLLGSAGEL 145
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 61.2 bits (148), Expect = 9e-11
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPP 328
T Y +PE LA P S A D + +GV+ + L C PF E + +
Sbjct: 172 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY-DENDAKLFEQILKAEYEFDS 230
Query: 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAI--ELREQID 385
A F L+ +P R + LQ ++ + ++ ++++
Sbjct: 231 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFA 290
Query: 386 EEEL 389
+ +
Sbjct: 291 KSKW 294
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (144), Expect = 2e-10
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPP 328
T + +PE + P+ +D++ +GV+ + L PF G+ K T++++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAVNYEFED 237
Query: 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIE 379
+ A F LL +P R + + LQ ++ +P+D+ + +A
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-KPKDTQQALSSAWS 288
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (143), Expect = 3e-10
Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 7/127 (5%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
LV Q K+ D + ++++ +ASPE + + S SD++
Sbjct: 132 CLVGENQVIKVSDFGMTRFVLDDQYTSSTG----TKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 353
GVL++E+F + + + + L P RP
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRP 247
Query: 354 KMGELLQ 360
LL+
Sbjct: 248 AFSRLLR 254
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 58.6 bits (141), Expect = 5e-10
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T Y SPE+ G V SD+Y LG +L+E+ PF+ + +R +PP
Sbjct: 177 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 236
Query: 331 LLK-FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
+ + + L L P R + ++++ +
Sbjct: 237 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 272
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (140), Expect = 8e-10
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 271 LMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR 324
L + + +PE + P S SD+Y G++L+EL P+S + + + +
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 225
Query: 325 VLPPQLLL---KFPKEA-SFCLWLLHPEPSGRPKMGELLQS 361
L P L PK L + RP ++L S
Sbjct: 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.8 bits (139), Expect = 9e-10
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 12/106 (11%)
Query: 274 TNWYASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 329
T Y+ PE + ++ ++ LG+LL+++ C PF EE R R RV +
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-SSE 230
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 375
W L PS RP E+ ++ + E E
Sbjct: 231 C-------QHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 58.1 bits (140), Expect = 1e-09
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQ 329
T +A+PE + PV +D++ +GVL + L PF+ ++ + R
Sbjct: 191 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDED 250
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
EA F LL EP R + + L+ +L ++ R
Sbjct: 251 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSR 296
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.5 bits (138), Expect = 1e-09
Identities = 20/140 (14%), Positives = 51/140 (36%), Gaps = 6/140 (4%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV K+ D ++ ++ + + + +PE ++ + ASD++
Sbjct: 141 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG--KIPIRWTAPEAISYRKFTSASDVWS 198
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 353
G++++E+ M ++ P + + E + RP
Sbjct: 199 FGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRP 258
Query: 354 KMGELLQS-EFLNEPRDSME 372
K +++ + L DS++
Sbjct: 259 KFADIVSILDKLIRAPDSLK 278
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.9 bits (137), Expect = 2e-09
Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328
+ +PE L S SD++ G+LL+E++ + +
Sbjct: 161 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD 220
Query: 329 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
P H + + RP +L +
Sbjct: 221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 252
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (137), Expect = 2e-09
Identities = 24/140 (17%), Positives = 42/140 (30%), Gaps = 11/140 (7%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV KI D + + + + + +PE + + SD++
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGR 352
G+LL E+ G + +L R P+E P R
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDR 254
Query: 353 PKMGELLQSEFLNEPRDSME 372
P L L + + E
Sbjct: 255 PTFDYLRS--VLEDFFTATE 272
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.9 bits (137), Expect = 2e-09
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 8/124 (6%)
Query: 274 TNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
T ++ +PE + D++ LG+ EL P + + P
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF-NMNAMSALYHIAQNESP 232
Query: 328 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDE 386
+ + +F L P RP LL+ F+ R + ++ + E
Sbjct: 233 ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRE 292
Query: 387 EELL 390
+ L
Sbjct: 293 LDNL 296
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.5 bits (136), Expect = 3e-09
Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 17/121 (14%)
Query: 276 WYASPEELAG-----APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
++ +PE + P +D++ LG+ L E+ P + +
Sbjct: 175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 234
Query: 328 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDE 386
++ F L R +LLQ F+ + +RE I E
Sbjct: 235 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK--------PIRELIAE 286
Query: 387 E 387
Sbjct: 287 A 287
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (89), Expect = 0.002
Identities = 4/55 (7%), Positives = 23/55 (41%)
Query: 106 SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 160
++ + + +R + + + +Q ++ + H I+ +++ + + +
Sbjct: 95 AVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDI 149
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (134), Expect = 4e-09
Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 7/105 (6%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ +PE + SD++ G+LL EL G + + P
Sbjct: 177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 235
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+ P+ EP RP L FL + S E +
Sbjct: 236 PPECPESLHDLMCQCWRKEPEERPTFEYLQA--FLEDYFTSTEPQ 278
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (134), Expect = 5e-09
Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 4/127 (3%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+++ K+ D + + +K+ + + + E L + SD++
Sbjct: 161 CMLDEKFTVKVADFGL-ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 353
GVLL+EL P L Q L HP+ RP
Sbjct: 220 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRP 279
Query: 354 KMGELLQ 360
EL+
Sbjct: 280 SFSELVS 286
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (135), Expect = 5e-09
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T Y +PE L G + + D + GVLL+E+ PF G+++ S+R P
Sbjct: 166 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH-GQDEEELFHSIRMD--NPFY 222
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKM-GELLQSEFLNE-PRDSMEEREAAIELREQIDEE 387
KEA + L EP R + G++ Q E + +E +E R ++
Sbjct: 223 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP 282
Query: 388 ELLLEF 393
F
Sbjct: 283 FDCSNF 288
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (133), Expect = 6e-09
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 329
+ +PE + S SD++ GVL++E F P+ K ++++ +
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR--GMKGSEVTAMLEKGERMG 230
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
P+E + RP +
Sbjct: 231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 262
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 9e-09
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 329
++ PE L + S SDI+ GVL++E++ P+ + T + + +
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE-RFTNSETAEHIAQGLRLYR 222
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
L K + H + RP LL
Sbjct: 223 PHLASEKVYTIMYSCWHEKADERPTFKILLS 253
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 54.7 bits (131), Expect = 1e-08
Identities = 16/136 (11%), Positives = 36/136 (26%), Gaps = 7/136 (5%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+L++ K+ D + + +K + D++
Sbjct: 141 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEPS 350
GV+++ L PF ++ + + + L +P
Sbjct: 201 TGVIMYTLLAGSPPF-WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 259
Query: 351 GRPKMGELLQSEFLNE 366
R E L F +
Sbjct: 260 KRYTAEEALAHPFFQQ 275
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 54.8 bits (131), Expect = 1e-08
Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 16/151 (10%)
Query: 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278
D+ + + G V +++ K D R + + + L T YA
Sbjct: 128 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH-------QHIPYRENKNLTGTARYA 180
Query: 279 SPEELAGAPVSCASDIYRLGVLLFELFC--------PFSTGEEKTRTMSSLRHRVLPPQL 330
S G S D+ LG +L +T +K +S + L
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
+P E ++ + +P L Q
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 271
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.8 bits (131), Expect = 1e-08
Identities = 21/142 (14%), Positives = 56/142 (39%), Gaps = 8/142 (5%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV K+ D ++ ++ P + + +PE + + ASD++
Sbjct: 159 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 218
Query: 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 352
G++++E+ P+ ++++ P + L + + R
Sbjct: 219 YGIVMWEVMSYGERPYW-DMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 277
Query: 353 PKMGELLQS--EFLNEPRDSME 372
PK G+++ + + + P +S++
Sbjct: 278 PKFGQIVNTLDKMIRNP-NSLK 298
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.6 bits (128), Expect = 2e-08
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 329
+ +PE L S ASD + GV L+E+F P+ G ++ + +
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLP 235
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE 366
P++ + + +P RP L +FL E
Sbjct: 236 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALR--DFLLE 271
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.2 bits (127), Expect = 4e-08
Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 6/92 (6%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 329
+ +PE L + SD++ G+LL+E+F P+ G L
Sbjct: 229 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP-GIPVDANFYKLIQNGFKMD 287
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
+E + RP L
Sbjct: 288 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 319
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (126), Expect = 5e-08
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 11/140 (7%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV KI D ++ + Q +K+ + + + E L + + SD++
Sbjct: 158 ILVGENYVAKIADFGLS------RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 211
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 353
GVLL+E+ G L + L + +P RP
Sbjct: 212 YGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP 271
Query: 354 KMGELLQ--SEFLNEPRDSM 371
++L + L E + +
Sbjct: 272 SFAQILVSLNRMLEERKTYV 291
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 52.1 bits (124), Expect = 8e-08
Identities = 18/112 (16%), Positives = 33/112 (29%), Gaps = 9/112 (8%)
Query: 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--------PFS 309
K+ ++ L T Y S G S D+ LG + +
Sbjct: 160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 219
Query: 310 TGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360
T ++K + + +L FP+E + + + P L
Sbjct: 220 TNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (124), Expect = 9e-08
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
Y SPE L +SD++ LG ++++L PF G E ++ P+
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--- 231
Query: 333 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
KF +A LL + + R E+ L
Sbjct: 232 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 264
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.4 bits (122), Expect = 1e-07
Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328
+ +PE L + SD++ GVLL+E+F G L+
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 257
Query: 329 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ + H PS RP +L++
Sbjct: 258 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.4 bits (122), Expect = 2e-07
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ PE + + SD++ GV+L+E+F G + +R +
Sbjct: 205 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACP 264
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ + P+ RP + +
Sbjct: 265 ENCPLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 3e-07
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 7/101 (6%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ +PE + + ASD++ GV ++E+ G + + + + P +
Sbjct: 172 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-M 230
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ--SEFLNEPR 368
P S +PS RP+ EL S L E +
Sbjct: 231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 271
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.1 bits (119), Expect = 4e-07
Identities = 25/138 (18%), Positives = 38/138 (27%), Gaps = 45/138 (32%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKT--------------- 315
T Y SPE L G S SDI+ +G+ L E+ P + K
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
Query: 316 --------------------------RTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPE 348
+ + + P F E F L
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 349 PSGRPKMGELLQSEFLNE 366
P+ R + +L+ F+
Sbjct: 286 PAERADLKQLMVHAFIKR 303
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 4e-07
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 15/131 (11%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ + E + + SD++ GV ++EL G + S L PQ
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLNEP----------RDSMEEREAAI 378
+ + + RPK EL+ S+ +P R + +
Sbjct: 236 PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSN 295
Query: 379 ELREQIDEEEL 389
R +DEE++
Sbjct: 296 FYRALMDEEDM 306
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 49.7 bits (118), Expect = 5e-07
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
+ +PE LA S SD++ GVLL+E+ G + ++ L +
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 240
Query: 333 KFPKEASFCLWLLHPEPSGRPKMGELLQ 360
K PS RP E+ Q
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSFAEIHQ 268
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (116), Expect = 9e-07
Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 28/121 (23%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEE----------------- 313
T WY +PE L + + D++ +G + E+F F +
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 237
Query: 314 ---KTRTMSSLRHRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLN 365
+ + Q + KF + L L P+ R L +
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297
Query: 366 E 366
+
Sbjct: 298 D 298
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 2e-06
Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 9/107 (8%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 329
+ +PE + S SD++ GV ++E P+ + K + + + +
Sbjct: 175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK--KMKGPEVMAFIEQGKRME 232
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 375
+ P E + + RP + Q + S+ +
Sbjct: 233 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQR--MRACYYSLASKV 277
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (92), Expect = 7e-04
Identities = 8/88 (9%), Positives = 27/88 (30%)
Query: 106 SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIES 165
L ++L + + V + Q+ + + V ++ ++ + ++ +
Sbjct: 94 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDF 153
Query: 166 ASCSDSGSDSHEEGLNTQNMETKDLSSP 193
G+D + +P
Sbjct: 154 GLSKALGADDSYYTARSAGKWPLKWYAP 181
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.9 bits (110), Expect = 4e-06
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 32/130 (24%)
Query: 272 METNWYASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
+ T WY P+ L GA + S + D++ G + EL P G + + + +
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221
Query: 328 P---------------------------QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELL 359
P ++ K LL P R E L
Sbjct: 222 PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
Query: 360 QSEFLNEPRD 369
Q + ++
Sbjct: 282 QHPYFSDFCP 291
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 5e-06
Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 30/126 (23%)
Query: 274 TNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSL--------- 321
T WY +PE L GA D++ +G +L EL PF G+ ++ +
Sbjct: 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 222
Query: 322 -------------RHRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEF 363
+ P L A L P R + L+ ++
Sbjct: 223 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 282
Query: 364 LNEPRD 369
+
Sbjct: 283 FSNRPG 288
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.6 bits (110), Expect = 6e-06
Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
Y +PE ++ P + + D + G+L++E+ PF +T + + +
Sbjct: 166 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY-DSNTMKTYEKILNA--ELRFPP 222
Query: 333 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
F ++ L+ + S R + + N P
Sbjct: 223 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 258
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (109), Expect = 7e-06
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T Y +PE L A D + LGV+++E+ C PF + + L + P+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR- 226
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
EA S LL +P R G E +
Sbjct: 227 --TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (109), Expect = 7e-06
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ +PE + + SD++ G+ L+ELF G +
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 269
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
P E +P RP +++Q
Sbjct: 270 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 7e-06
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ SPE L + SD++ GV+L+E+ G + + + L +
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 257
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361
P RP E++ S
Sbjct: 258 DNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 1e-05
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 34/150 (22%)
Query: 276 WYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP--- 328
WY +PE + + DI+ +G ++ E+ F + + ++ PP
Sbjct: 183 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 242
Query: 329 -------------------------QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSE 362
+L A + +L + R GE L
Sbjct: 243 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 302
Query: 363 FLNEPRDSMEEREAAIELREQIDEEELLLE 392
+ D+ +E + + + D+ + L+
Sbjct: 303 YFESLHDTEDEPQVQ-KYDDSFDDVDRTLD 331
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.5 bits (107), Expect = 1e-05
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 4/96 (4%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
+ A G ++D + LG +LF+L PF + K + + +L
Sbjct: 171 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 230
Query: 333 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
F E S LL + + R E P
Sbjct: 231 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 266
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.3 bits (106), Expect = 2e-05
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRV---LPPQL 330
+ +PE + + SD++ GVLL+E+F ++ + R+ +
Sbjct: 199 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 258
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
E L H EPS RP EL++
Sbjct: 259 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 289
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (105), Expect = 2e-05
Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 31/125 (24%)
Query: 276 WYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL 331
WY +PE L G S A DI+ LG + E+ F E + R P +++
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 332 LK-----------FPKEA----------------SFCLWLLHPEPSGRPKMGELLQSEFL 364
FPK A S +LH +P+ R L F
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 365 NEPRD 369
+
Sbjct: 287 QDVTK 291
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (104), Expect = 3e-05
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 276 WYASPEELAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--PP 328
Y +P+ + G A D + LGVL++EL PF T + + + + + R+L P
Sbjct: 195 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF-TVDGEKNSQAEISRRILKSEP 253
Query: 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
+ A LL +P R G E
Sbjct: 254 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 293
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.1 bits (103), Expect = 4e-05
Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 38/207 (18%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIY 295
+L+ + KI D + + + + + WY +PE + + + DI+
Sbjct: 140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR--WYRAPEIMLNSKGYTKSIDIW 197
Query: 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF------------------ 334
+G +L E+ F + L P Q L
Sbjct: 198 SVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 257
Query: 335 -----------PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQ 383
K +L P R ++ + L +L + D +E A +
Sbjct: 258 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 317
Query: 384 IDEEELLLEFLLLVQQRKQESAKKLQD 410
++ ++L E L ++ E + Q
Sbjct: 318 MELDDLPKEKL---KELIFEETARFQP 341
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (101), Expect = 6e-05
Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 46/162 (28%)
Query: 272 METNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
+ T WY +PE + + DI+ +G ++ EL F + + LR P
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 328 PQLLLKF-----------------------------PKEASFCLWLLHPEPSGRPKMGEL 358
LLK P +L + R +
Sbjct: 239 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
Query: 359 LQSEFLNEPRD------------SMEEREAAI-ELREQIDEE 387
L + + D S E R+ I E + +E
Sbjct: 299 LAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 340
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (101), Expect = 7e-05
Identities = 25/128 (19%), Positives = 38/128 (29%), Gaps = 30/128 (23%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST-----------------G 311
+ A + + D++ G +L EL F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 312 EEKTRTMSSLRHRVLPPQL---------LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQS 361
E+ R M+ PQ+ + P EA + C LL P+ R E
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 362 EFLNEPRD 369
F +E RD
Sbjct: 304 SFFDELRD 311
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (98), Expect = 1e-04
Identities = 34/249 (13%), Positives = 69/249 (27%), Gaps = 49/249 (19%)
Query: 153 VMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209
H + FI + + + L + E L D L R T
Sbjct: 50 QTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSL-----FDYLNRYTVTVEGM 102
Query: 210 LQLVTAPTNDLSEASCMQSSSAYGTHVV---------LVEGMQEHKILDNRVNVEQVEEK 260
++L + + L+ + + LV+ I D + V + +
Sbjct: 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-RHDSA 161
Query: 261 KQPFPMKQILLMETNWYASPEELAGA------PVSCASDIYRLGVLLFELF--------- 305
+ + T Y +PE L + +DIY +G++ +E+
Sbjct: 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221
Query: 306 ----CPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFC----------LWLLHPEPSG 351
P+ ++ +R V +L P C + +
Sbjct: 222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 281
Query: 352 RPKMGELLQ 360
R + +
Sbjct: 282 RLTALRIKK 290
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 41.4 bits (96), Expect = 2e-04
Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 31/122 (25%)
Query: 276 WYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEE------------------ 313
WY +P+ L G+ S DI+ +G + E+ F E
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 314 --------KTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
K ++ + L + +L +P+ R + L+ +
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Query: 365 NE 366
E
Sbjct: 285 KE 286
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 43/311 (13%), Positives = 93/311 (29%), Gaps = 49/311 (15%)
Query: 83 LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142
L V + ++ F ++ + +D ++ Q++ + HS GI
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 140
Query: 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 202
+ +++PS V+ S + + + + T + T+ +P
Sbjct: 141 IHRDLKPSNIVVKSDCTLKIL----DFGLARTAGTSFMMTPYVVTRYYRAP--------- 187
Query: 203 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQ 262
L + D+ C+ L G + V +
Sbjct: 188 ----EVILGMGYKENVDIWSVGCIMGEMVRHKI--LFPGRDYIDQWNK---VIEQLGTPC 238
Query: 263 PFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLR 322
P MK++ N+ + + AG + S
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFP-------------------KLFPDSLFPADSEH 279
Query: 323 HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELRE 382
+++ Q +L +P+ R + + LQ ++N D E ++ +
Sbjct: 280 NKLKASQAR-------DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYD 332
Query: 383 -QIDEEELLLE 392
Q+DE E +E
Sbjct: 333 KQLDEREHTIE 343
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.9 bits (95), Expect = 4e-04
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 7/96 (7%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
+PE + + A D + LGVL++E+ PF + + +V P
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--- 259
Query: 333 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
F + LL + + R + ++ N
Sbjct: 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.2 bits (90), Expect = 0.001
Identities = 31/161 (19%), Positives = 46/161 (28%), Gaps = 51/161 (31%)
Query: 264 FPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSS 320
+ ++T Y SPE L GAP C +DI+ L+FEL F +E
Sbjct: 182 YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE-PDEGHSYTKD 240
Query: 321 LRHRVLPPQLLLKFPKE------------------------------------------- 337
H +LL + P
Sbjct: 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 300
Query: 338 ----ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+ F +L +P R G L+ +L + E R
Sbjct: 301 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIR 341
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.2 bits (87), Expect = 0.003
Identities = 28/145 (19%), Positives = 58/145 (40%), Gaps = 16/145 (11%)
Query: 534 PLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR 593
LV ++Q ++ + P + + S + + + + + NP L
Sbjct: 2 YLVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILY-NP------------ALP 48
Query: 594 VKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVF--ECDAIINENRDIHYPVV 651
+ D+ L+ +++VC + F DGE A G NK +V+ +++ D
Sbjct: 49 REIDVELHKSLDHTSVVCCVKFSNDGEYL-ATGCNKTTQVYRVSDGSLVARLSDDSAANK 107
Query: 652 EMASRSKLSSICWNSYIKSQIASSN 676
+ + + SS + YI+S S +
Sbjct: 108 DPENLNTSSSPSSDLYIRSVCFSPD 132
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 720 | |||
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.98 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.97 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.62 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.49 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.49 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.44 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.43 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.42 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.41 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.4 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.39 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.38 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.38 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.38 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.37 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.37 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.34 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.28 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.27 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.26 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.25 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.2 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.19 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.18 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.12 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.09 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.08 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.06 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.02 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 98.88 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 98.86 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.84 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.76 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 98.73 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 98.69 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 98.63 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 98.58 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.52 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 98.41 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 98.33 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 98.29 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 98.28 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.27 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 98.23 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.06 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.0 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 97.94 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 97.92 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 97.64 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.43 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.24 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 97.19 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.07 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 96.99 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 95.77 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 95.4 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 94.51 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 93.67 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 93.2 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 92.55 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 91.78 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 91.72 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 91.72 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 91.22 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 89.46 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 88.9 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 87.84 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 87.77 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 87.65 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 87.36 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 86.26 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 85.27 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 83.11 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 82.28 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 81.35 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 80.48 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 80.05 |
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-43 Score=367.17 Aligned_cols=209 Identities=14% Similarity=0.145 Sum_probs=173.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++.+.........+|+|||| .|++|.+++.+.. .+++.+++.|+.||+.||+|||++|
T Consensus 54 ~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH~~~ 132 (270)
T d1t4ha_ 54 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRT 132 (270)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHHHCC
Confidence 4558889999999999999999443333334468999999 8999999995543 4999999999999999999999999
Q ss_pred --ceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 --IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 --IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||||+|||++ .++.+||+|||+++.....
T Consensus 133 ~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~-------------------------------------------- 168 (270)
T d1t4ha_ 133 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------- 168 (270)
T ss_dssp SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------
T ss_pred CCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC--------------------------------------------
Confidence 99999999999997 5789999988887321000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|||||++.+. |+.++||||||
T Consensus 169 ------------------------------------------------~~~~~~GT~~Y~aPE~~~~~-~~~~~DIwSlG 199 (270)
T d1t4ha_ 169 ------------------------------------------------FAKAVIGTPEFMAPEMYEEK-YDESVDVYAFG 199 (270)
T ss_dssp ------------------------------------------------SBEESCSSCCCCCGGGGGTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccCCcccCccccCHHHhCCC-CCCcCchhhHH
Confidence 00114799999999999764 99999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|++|||++ ||.........+..+..+..|+.+....+ ...+||.+||.+||++|||+.|+|+||||+
T Consensus 200 vilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 200 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 99999999 88776666677777777777776665554 455999999999999999999999999995
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-44 Score=370.92 Aligned_cols=212 Identities=13% Similarity=0.142 Sum_probs=168.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.++. .+|+|||| .|++|.++|.+. ..+++.+++.|+.||+.||.|||++|
T Consensus 49 ~~~~Ei~~l~~l~HpnIv~~~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~-~~l~e~~~~~i~~qi~~al~ylH~~~ 123 (271)
T d1nvra_ 49 NIKKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG 123 (271)
T ss_dssp CHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEee-eeccCc---eeEEEEeccCCCcHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3457888999999999999999 555543 67999999 889999999544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+|+........
T Consensus 124 IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~-------------------------------------------- 159 (271)
T d1nvra_ 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------------------------------------- 159 (271)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE--------------------------------------------
T ss_pred CccCcccHHHEEECCCCCEEEccchhheeeccCCcc--------------------------------------------
Confidence 999999999999999999999999988432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
......+||+.|||||++.+..+ +.++|||||||+
T Consensus 160 --------------------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvi 195 (271)
T d1nvra_ 160 --------------------------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 195 (271)
T ss_dssp --------------------------------------------CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHH
Confidence 00012579999999999988875 678999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++ ||............+........ .....+...+||.+||++||++|||++|+|+||||++.
T Consensus 196 lyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 196 LTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp HHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 999999 77655444344444444333333 33334455699999999999999999999999999875
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-44 Score=367.94 Aligned_cols=204 Identities=17% Similarity=0.235 Sum_probs=166.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.++. .+|+|||| .|++|.++|.+.+ .+++.+++.|+.||+.||+|||++|
T Consensus 52 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~ivmEy~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH~~~ 126 (263)
T d2j4za1 52 QLRREVEIQSHLRHPNILRLYG-YFHDAT---RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKR 126 (263)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCCCeEEE-EEEECC---EEEEEEeecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 665553 57999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||++......
T Consensus 127 ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~----------------------------------------------- 159 (263)
T d2j4za1 127 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----------------------------------------------- 159 (263)
T ss_dssp CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-----------------------------------------------
T ss_pred eeeeeeccccceecCCCCEeecccceeeecCCC-----------------------------------------------
Confidence 999999999999999999999998887432110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..|+.++|||||||+|
T Consensus 160 ---------------------------------------------~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvil 194 (263)
T d2j4za1 160 ---------------------------------------------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC 194 (263)
T ss_dssp ---------------------------------------------CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHH
Confidence 00114789999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|||++ ||...... ..+..+....+ .++...+ ...+||.+||++||.+|||++|+|+||||+.
T Consensus 195 yell~G~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~ 260 (263)
T d2j4za1 195 YEFLVGKPPFEANTYQ-ETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260 (263)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHTTCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred HHHhcCCCCCCCCCHH-HHHHHHHcCCC--CCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence 99999 77665443 34444443322 1223334 4559999999999999999999999999974
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-42 Score=363.68 Aligned_cols=227 Identities=14% Similarity=0.164 Sum_probs=178.0
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCH
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDV 120 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~ 120 (720)
...++++.+....... .-+..+|+.+|++++|||||++++ ++.++. .+|+|||| .|++|.+++.+. .+++
T Consensus 45 ~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~ivmEy~~gg~L~~~~~~~--~l~~ 115 (293)
T d1yhwa1 45 GQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDE 115 (293)
T ss_dssp CCEEEEEEEEGGGCSC---HHHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHS--CCCH
T ss_pred CCEEEEEEEecccChH---HHHHHHHHHHHHhCCCCCEeeEeE-EEEECC---EEEEEEEecCCCcHHHHhhcc--CCCH
Confidence 4445555544433221 123347788999999999999999 555554 57999999 899999988543 3999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhh
Q 004989 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
.+++.|++||+.||.|||++|||||||||+|||++.+|++||+|||+++.......
T Consensus 116 ~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~------------------------ 171 (293)
T d1yhwa1 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------ 171 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccc------------------------
Confidence 99999999999999999999999999999999999999999999998843211100
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCc
Q 004989 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.....+||+.|+||
T Consensus 172 ------------------------------------------------------------------~~~~~~gt~~Y~aP 185 (293)
T d1yhwa1 172 ------------------------------------------------------------------KRSTMVGTPYWMAP 185 (293)
T ss_dssp ------------------------------------------------------------------CBCCCCSCGGGCCH
T ss_pred ------------------------------------------------------------------cccccccCCCccCh
Confidence 00114799999999
Q ss_pred ccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChH
Q 004989 281 EELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMG 356 (720)
Q Consensus 281 E~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~ 356 (720)
|++.+..|+.++|||||||++|||++ ||............+.....+...+..++. ..+||.+||++||.+|||+.
T Consensus 186 E~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~ 265 (293)
T d1yhwa1 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAK 265 (293)
T ss_dssp HHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHH
Confidence 99999999999999999999999999 777666555555555554444444444444 45999999999999999999
Q ss_pred HHHcCcccCCC
Q 004989 357 ELLQSEFLNEP 367 (720)
Q Consensus 357 eiL~hp~~~~~ 367 (720)
|+|+||||+..
T Consensus 266 eil~Hp~~~~~ 276 (293)
T d1yhwa1 266 ELLQHQFLKIA 276 (293)
T ss_dssp HHTTCGGGGGC
T ss_pred HHhcCHhhCCC
Confidence 99999999754
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-42 Score=366.53 Aligned_cols=227 Identities=15% Similarity=0.135 Sum_probs=173.1
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHH
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVY 121 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~ 121 (720)
..++++.+...........-+..+|+.+|++++|||||++++ ++.++. .+|+|||| .|++|..++... .++++.
T Consensus 41 ~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~iv~E~~~~g~l~~~~~~~-~~l~e~ 115 (309)
T d1u5ra_ 41 EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHK-KPLQEV 115 (309)
T ss_dssp EEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHHT-SCCCHH
T ss_pred cEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEE-EEEECC---EEEEEEEecCCCchHHHHHhC-CCCCHH
Confidence 334545443333222222234458899999999999999999 555543 68999999 778887666443 459999
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.|++||+.||.|||++|||||||||+|||++.++.+||+|||++.....
T Consensus 116 ~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~---------------------------- 167 (309)
T d1u5ra_ 116 EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---------------------------- 167 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC----------------------------
Confidence 9999999999999999999999999999999999999999998888732100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.....||+.|||||
T Consensus 168 ------------------------------------------------------------------~~~~~GT~~Y~APE 181 (309)
T d1u5ra_ 168 ------------------------------------------------------------------ANSFVGTPYWMAPE 181 (309)
T ss_dssp ------------------------------------------------------------------BCCCCSCGGGCCHH
T ss_pred ------------------------------------------------------------------CCccccCccccCHH
Confidence 01147899999999
Q ss_pred cccC---CCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCC
Q 004989 282 ELAG---APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 282 ~l~~---~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpt 354 (720)
++.+ ..|+.++|||||||++|||++ ||........ +..+.....++.....++. ..+||.+||++||.+|||
T Consensus 182 ~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt 260 (309)
T d1u5ra_ 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 260 (309)
T ss_dssp HHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcC
Confidence 9965 348999999999999999999 7766555433 3334444444433444444 459999999999999999
Q ss_pred hHHHHcCcccCCCcc
Q 004989 355 MGELLQSEFLNEPRD 369 (720)
Q Consensus 355 a~eiL~hp~~~~~~~ 369 (720)
+.|+|+||||.....
T Consensus 261 ~~ell~Hp~~~~~~~ 275 (309)
T d1u5ra_ 261 SEVLLKHRFVLRERP 275 (309)
T ss_dssp HHHHTTCHHHHSCCC
T ss_pred HHHHHhCHHhcCCCC
Confidence 999999999986533
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-42 Score=362.71 Aligned_cols=212 Identities=13% Similarity=0.161 Sum_probs=167.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.++. .+|+|||| .|++|.+++.+....+++.+++.|+.||+.||.|||++|
T Consensus 55 ~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ 130 (288)
T d2jfla1 55 DYMVEIDILASCDHPNIVKLLD-AFYYEN---NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 130 (288)
T ss_dssp GTHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEeeCC---eEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447888999999999999999 555543 57999999 899999998655556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||++...... .
T Consensus 131 ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~-----------------------------------~----------- 164 (288)
T d2jfla1 131 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-----------------------------------I----------- 164 (288)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECHHH-----------------------------------H-----------
T ss_pred EEEeecChhheeECCCCCEEEEechhhhccCCC-----------------------------------c-----------
Confidence 999999999999999999999999887321000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYR 296 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwS 296 (720)
. .....+||+.|+|||++. +..|+.++||||
T Consensus 165 -------------------------------------~-------~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwS 200 (288)
T d2jfla1 165 -------------------------------------Q-------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 200 (288)
T ss_dssp -------------------------------------H-------HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHH
T ss_pred -------------------------------------c-------cccccccccccCCHHHHhhcccCCCCCChhhhHHH
Confidence 0 001147899999999984 445899999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++|||++ ||......................+..++ ...+||.+||++||.+|||+.|+|+||||+...
T Consensus 201 lGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~~ 276 (288)
T d2jfla1 201 LGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS 276 (288)
T ss_dssp HHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCCC
T ss_pred HHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 9999999999 77665554333333333222222233444 455999999999999999999999999998653
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.1e-42 Score=362.01 Aligned_cols=208 Identities=16% Similarity=0.208 Sum_probs=159.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ +++++. .+|+|||| .|++|.++|...+ .+++.+++.|+.||+.||.|||++|
T Consensus 53 ~~~~Ei~il~~l~HpnIv~l~~-~~~~~~---~~~lvmE~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~ 127 (307)
T d1a06a_ 53 SMENEIAVLHKIKHPNIVALDD-IYESGG---HLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLG 127 (307)
T ss_dssp --CHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeccCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhhhce
Confidence 3457888999999999999999 665553 67999999 8899999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||||+|||+. .++.+||+|||+++......
T Consensus 128 iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~------------------------------------------- 164 (307)
T d1a06a_ 128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS------------------------------------------- 164 (307)
T ss_dssp CCCSCCCGGGEEESSSSTTCCEEECCC-----------------------------------------------------
T ss_pred eeeEEecccceeecccCCCceEEEeccceeEEccCCC-------------------------------------------
Confidence 99999999999995 47889999988874321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+..|+.++||||||
T Consensus 165 ------------------------------------------------~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlG 196 (307)
T d1a06a_ 165 ------------------------------------------------VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 196 (307)
T ss_dssp --------------------------------------------------------CTTSCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------eeeeeeeCccccCcHHHcCCCCCcHHHhhhhh
Confidence 00114799999999999999999999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||||++ ||...... ..+..+.... ++....... +...+||.+||++||++|||+.|+|+||||++.
T Consensus 197 vilyell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 270 (307)
T d1a06a_ 197 VIAYILLCGYPPFYDENDA-KLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 270 (307)
T ss_dssp HHHHHHHHSSCSCCCSSHH-HHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 99999999 77665544 3444444332 222333344 445699999999999999999999999999864
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-42 Score=359.19 Aligned_cols=209 Identities=17% Similarity=0.225 Sum_probs=159.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|++++|||||++++ ++.+... ..+|+|||| .||+|.+++.+ ....+++..++.++.||+.||.|||
T Consensus 49 ~~~~E~~il~~l~HpnIv~~~~-~~~~~~~-~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH 126 (269)
T d2java1 49 MLVSEVNLLRELKHPNIVRYYD-RIIDRTN-TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 126 (269)
T ss_dssp HHHHHHHHTTSCCCTTBCCEEE-EEEC-----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEeeEEE-EEEeCCC-CEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4457888999999999999999 4433222 257999999 89999999842 3456999999999999999999999
Q ss_pred HCC-----ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 139 SQG-----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 s~g-----IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
++| ||||||||+|||++.++.+||+|||+++...... .
T Consensus 127 ~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~---------------------------------~---- 169 (269)
T d2java1 127 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------------------------S---- 169 (269)
T ss_dssp HHCC---------CCGGGEEECTTSCEEECCHHHHHHC------------------------------------------
T ss_pred HhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCC---------------------------------C----
Confidence 976 9999999999999999999999888874321110 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.....+||+.|+|||++.+..|+.++|
T Consensus 170 -----------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~D 196 (269)
T d2java1 170 -----------------------------------------------------FAKAFVGTPYYMSPEQMNRMSYNEKSD 196 (269)
T ss_dssp -----------------------------------------------------------CCCSCCCHHHHTTCCCCHHHH
T ss_pred -----------------------------------------------------ccccCCCCcccCCHHHHcCCCCChHHH
Confidence 001147899999999999999999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||||||++|||++ ||...... .....+....+++......+...+||.+||++||.+|||+.|+|+|||+
T Consensus 197 IwSlGvilyel~tg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 197 IWSLGCLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred HHhhCHHHHHHhhCCCCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 9999999999999 77665443 4555565555543322333455699999999999999999999999996
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-42 Score=367.08 Aligned_cols=207 Identities=18% Similarity=0.208 Sum_probs=162.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..+|++++|||||++++ ++.++. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||.|||+ +
T Consensus 50 ~~~~Ei~il~~l~HpnIv~l~~-~~~~~~---~~~iVmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH~~~ 124 (322)
T d1s9ja_ 50 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 124 (322)
T ss_dssp HHHHHGGGGGGCCCTTBCCEEE-EEECSS---EEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4458899999999999999999 665554 58999999 8899999996544 49999999999999999999997 5
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||||+.+|++||+|||+|.....
T Consensus 125 ~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~----------------------------------------------- 157 (322)
T d1s9ja_ 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----------------------------------------------- 157 (322)
T ss_dssp CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH-----------------------------------------------
T ss_pred CEEccccCHHHeeECCCCCEEEeeCCCccccCC-----------------------------------------------
Confidence 999999999999999999999999888732100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. .....+||++|+|||++.+..|+.++|||||||+
T Consensus 158 --------------------------------------~-------~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvi 192 (322)
T d1s9ja_ 158 --------------------------------------S-------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192 (322)
T ss_dssp --------------------------------------H-------TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHH
T ss_pred --------------------------------------C-------ccccccCCccccCchHHcCCCCCcHHHHHHHHHH
Confidence 0 0012589999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHH-----------------------------------------HHhhcCCCCcccc-cc-C
Q 004989 301 LFELFC---PFSTGEEKTRTM-----------------------------------------SSLRHRVLPPQLL-LK-F 334 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~-----------------------------------------~~l~~~~~p~~~~-~~-~ 334 (720)
+|||++ ||.+.+...... ..+.... ++.+. .. .
T Consensus 193 l~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s 271 (322)
T d1s9ja_ 193 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP-PPKLPSGVFS 271 (322)
T ss_dssp HHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSC-CCCCCBTTBC
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccC-CccCccccCC
Confidence 999999 776543221110 0111111 11111 12 2
Q ss_pred chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 335 PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 335 p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+...+||.+||++||.+|||++|+|+||||+..
T Consensus 272 ~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~ 304 (322)
T d1s9ja_ 272 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304 (322)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence 345699999999999999999999999999753
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-42 Score=359.17 Aligned_cols=214 Identities=18% Similarity=0.261 Sum_probs=169.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ +++++. .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||+|||++|
T Consensus 54 ~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~~ivmEy~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH~~~ 128 (288)
T d1uu3a_ 54 YVTRERDVMSRLDHPFFVKLYF-TFQDDE---KLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKG 128 (288)
T ss_dssp HHHHHHHHHHHCCSTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCeeEEEE-EEEECC---EEEEEEEccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhcccc
Confidence 4457888999999999999999 665553 57999999 8999999985544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+|+........
T Consensus 129 iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~-------------------------------------------- 164 (288)
T d1uu3a_ 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-------------------------------------------- 164 (288)
T ss_dssp EECSCCSGGGEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred EEcCcCCccccccCCCceEEecccccceecccCCcc--------------------------------------------
Confidence 999999999999999999999999988543211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+||+.|+|||++.+..|+.++|||||||+|
T Consensus 165 --------------------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvil 200 (288)
T d1uu3a_ 165 --------------------------------------------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 200 (288)
T ss_dssp -------------------------------------------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccccCCccccCceeeccCCCCcccceehhhHHH
Confidence 000124799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHH------HHcCcccCCC-ccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEP-RDS 370 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~e------iL~hp~~~~~-~~~ 370 (720)
|||++ ||...+.. ..+..+.+..+ .++. ..++..+||.+||++||.+|||++| +++||||+.. ++.
T Consensus 201 yell~g~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~ 277 (288)
T d1uu3a_ 201 YQLVAGLPPFRAGNEY-LIFQKIIKLEY--DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 277 (288)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHTTCC--CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred HHHhhCCCCCCCcCHH-HHHHHHHcCCC--CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHH
Confidence 99999 77765544 44444444332 1222 3455569999999999999999988 5789999886 334
Q ss_pred hH
Q 004989 371 ME 372 (720)
Q Consensus 371 l~ 372 (720)
+.
T Consensus 278 l~ 279 (288)
T d1uu3a_ 278 LH 279 (288)
T ss_dssp GG
T ss_pred hh
Confidence 43
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=3.3e-41 Score=362.88 Aligned_cols=211 Identities=18% Similarity=0.277 Sum_probs=171.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ +++++. .+|+|||| .|++|.+++.+.+.++++.+++.|+.||+.||.|||++|
T Consensus 72 ~~~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~ 147 (352)
T d1koba_ 72 TVKNEISIMNQLHHPKLINLHD-AFEDKY---EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 147 (352)
T ss_dssp HHHHHHHHHTTCCSTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457889999999999999999 665543 67999999 899999988666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEc--cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 142 IVVHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 142 IvHrDLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||||||||+||||+ .++.+||+|||++.......
T Consensus 148 iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~-------------------------------------------- 183 (352)
T d1koba_ 148 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-------------------------------------------- 183 (352)
T ss_dssp EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--------------------------------------------
T ss_pred eeecccccccccccccCCCeEEEeecccceecCCCC--------------------------------------------
Confidence 99999999999998 57899999998874332110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..|+.++|||||||
T Consensus 184 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 216 (352)
T d1koba_ 184 -----------------------------------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 216 (352)
T ss_dssp -----------------------------------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHH
T ss_pred -----------------------------------------------ceeeccCcccccCHHHHcCCCCCCccchHHHHH
Confidence 001146899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||||++ ||.+..... .+..+.... +++.....+ +...+||.+||++||.+|||+.|+|+||||+....
T Consensus 217 ilyelltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~ 291 (352)
T d1koba_ 217 LGYVLLSGLSPFAGEDDLE-TLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 291 (352)
T ss_dssp HHHHHHHSCCSSCCSSHHH-HHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence 9999999 777665543 344444332 333333444 44569999999999999999999999999987643
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-41 Score=351.36 Aligned_cols=208 Identities=18% Similarity=0.268 Sum_probs=167.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.+|++++|||||++++ ++++.. .+|+|||| .|++|.++|.+.+ .+++.+++.++.||+.||.|||++|
T Consensus 59 ~~~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH~~~ 133 (293)
T d1jksa_ 59 DIEREVSILKEIQHPNVITLHE-VYENKT---DVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQ 133 (293)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhhhcc
Confidence 3447888999999999999999 666554 67999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 142 IVVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||||||||+|||++.++ .+|++|||++.......
T Consensus 134 ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~------------------------------------------ 171 (293)
T d1jksa_ 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN------------------------------------------ 171 (293)
T ss_dssp EECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC------------------------------------------
T ss_pred eeecccccceEEEecCCCcccceEecchhhhhhcCCCc------------------------------------------
Confidence 99999999999998766 48998888773321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 172 -------------------------------------------------~~~~~~~t~~y~APE~~~~~~~~~~~DiwSl 202 (293)
T d1jksa_ 172 -------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 202 (293)
T ss_dssp -------------------------------------------------BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred -------------------------------------------------cccccCCCCcccCHHHHcCCCCCCcccchhh
Confidence 0011468999999999999889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|||++ ||.+.... ..+..+.... +++......+. ..+||.+||++||.+|||++|+|+||||+..
T Consensus 203 Gvilyell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 277 (293)
T d1jksa_ 203 GVITYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277 (293)
T ss_dssp HHHHHHHHHSSCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred hHHHHHHHcCCCCCCCCCHH-HHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 999999999 77765554 3444444432 33344444444 4599999999999999999999999999864
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.8e-41 Score=354.93 Aligned_cols=204 Identities=14% Similarity=0.182 Sum_probs=166.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~ivmE~~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ 124 (316)
T d1fota_ 50 HTNDERLMLSIVTHPFIIRMWG-TFQDAQ---QIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKD 124 (316)
T ss_dssp HHHHHHHHHHSCCBTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhccCcChhheee-eEeeCC---eeeeEeeecCCccccccccccc-cccccHHHHHHHHHHHhhhhhccCc
Confidence 3447888999999999999999 555543 68999999 8999999885544 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.+|.+||+|||+++.....
T Consensus 125 iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~----------------------------------------------- 157 (316)
T d1fota_ 125 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV----------------------------------------------- 157 (316)
T ss_dssp EECCCCCGGGEEECTTSCEEECCCSSCEECSSC-----------------------------------------------
T ss_pred EEccccCchheeEcCCCCEEEecCccceEeccc-----------------------------------------------
Confidence 999999999999999999999998887432100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
....+||+.|+|||++.+..|+.++|||||||+|
T Consensus 158 ----------------------------------------------~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvil 191 (316)
T d1fota_ 158 ----------------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILI 191 (316)
T ss_dssp ----------------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHH
T ss_pred ----------------------------------------------cccccCcccccCHHHHcCCCCCchhhccccchhH
Confidence 0114799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+.....+ ++.. .+...+|+.+||.+||.+|+ |++++|+||||++.
T Consensus 192 yemltG~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i 263 (316)
T d1fota_ 192 YEMLAGYTPFYDSNTM-KTYEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263 (316)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHHHhCCCCCCCcCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence 99999 78766554 334444433221 1222 34556999999999999996 99999999999986
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-40 Score=356.04 Aligned_cols=208 Identities=18% Similarity=0.245 Sum_probs=168.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++++.. .+|+|||| .||+|.+++.+.+ .+++..++.+++||+.||+|||++|
T Consensus 51 ~~~~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~iv~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH~~~ 125 (337)
T d1o6la_ 51 HTVTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRD 125 (337)
T ss_dssp HHHHHHHHHHSCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEe-eecccc---ccccceeccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhhhcC
Confidence 4457888999999999999999 666554 68999999 9999999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.+|++||+|||+++.......
T Consensus 126 iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~--------------------------------------------- 160 (337)
T d1o6la_ 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--------------------------------------------- 160 (337)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC---------------------------------------------
T ss_pred ccccccCHHHeEecCCCCEEEeecccccccccCCc---------------------------------------------
Confidence 99999999999999999999999998853211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..|+.++|||||||++
T Consensus 161 ---------------------------------------------~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvil 195 (337)
T d1o6la_ 161 ---------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195 (337)
T ss_dssp ---------------------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccceeCHHHhhhhhccCCCCChhhcccchhhHH
Confidence 00125799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|||++ ||...+.. .....+....++ ......+...+||.+||++||.+||+ +.|+++||||...
T Consensus 196 yeml~G~~pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i 267 (337)
T d1o6la_ 196 YEMMCGRLPFYNQDHE-RLFELILMEEIR-FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHCCCCCCCcCHH-HHHHHHhcCCCC-CCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence 99999 67665554 344444433221 11123345569999999999999994 8999999999875
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.2e-40 Score=358.26 Aligned_cols=209 Identities=17% Similarity=0.258 Sum_probs=169.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++|||||++++ +++++. .+|+|||| .|++|.++|.+....+++.+++.|+.||+.||.|||++||
T Consensus 70 ~~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~i 145 (350)
T d1koaa2 70 VRKEIQTMSVLRHPTLVNLHD-AFEDDN---EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY 145 (350)
T ss_dssp HHHHHHHHHHTCCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 347888999999999999999 565543 68999999 8999999996555569999999999999999999999999
Q ss_pred eeccCCCCcEEEc--cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 143 VVHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 143 vHrDLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||+|||++ .++.+||+|||++...+...
T Consensus 146 iHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~--------------------------------------------- 180 (350)
T d1koaa2 146 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ--------------------------------------------- 180 (350)
T ss_dssp ECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS---------------------------------------------
T ss_pred eeeeechhHeeeccCCCCeEEEeecchheeccccc---------------------------------------------
Confidence 9999999999996 46789999888874332110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|||||++.+..|+.++|||||||+
T Consensus 181 ----------------------------------------------~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvi 214 (350)
T d1koaa2 181 ----------------------------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 214 (350)
T ss_dssp ----------------------------------------------CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHH
T ss_pred ----------------------------------------------ccceecCcccccCHHHHcCCCCChhHhhhhhhHH
Confidence 0011478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|||++ ||.+.... ..+..+.... +++......+ ...+||.+||++||++|||++|+|+||||+...
T Consensus 215 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~ 287 (350)
T d1koaa2 215 SYILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 287 (350)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 999999 77665444 4444444332 3333334444 455999999999999999999999999998763
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8.4e-41 Score=361.46 Aligned_cols=206 Identities=17% Similarity=0.189 Sum_probs=163.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
++..+..+++.++|||||++++ ++++.. .+|+|||| .|++|.++|.+.. .+++.+++.|+.||+.||.|||++|
T Consensus 53 ~e~~~~~~l~~~~hpnIv~l~~-~~~~~~---~~~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH~~~ 127 (364)
T d1omwa3 53 NERIMLSLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRF 127 (364)
T ss_dssp HHHHHHHHHSSSCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCcEEEEEE-EEEECC---EEEEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHHCC
Confidence 4446677889999999999999 565553 57999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.+|.+||+|||+++......
T Consensus 128 iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~---------------------------------------------- 161 (364)
T d1omwa3 128 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---------------------------------------------- 161 (364)
T ss_dssp EECCCCSGGGEEECSSSCEEECCCTTCEECSSSC----------------------------------------------
T ss_pred ccceeeccceeEEcCCCcEEEeeeceeeecCCCc----------------------------------------------
Confidence 9999999999999999999999999874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
....+||+.|+|||++.+ ..|+.++|||||||+
T Consensus 162 ----------------------------------------------~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvi 195 (364)
T d1omwa3 162 ----------------------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195 (364)
T ss_dssp ----------------------------------------------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccccccchhHHhhcCCCCCcccchhHHHHH
Confidence 011478999999999975 458999999999999
Q ss_pred hhhccc---cCCCCchH--HHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||||++ ||...... ....... ...++.++..+ +...+||.+||++||.+||| ++|+++||||+..
T Consensus 196 lyemltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i 271 (364)
T d1omwa3 196 LFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271 (364)
T ss_dssp HHHHHHSSCSSCSSCSSCHHHHHHHS--SSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhc--ccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence 999999 77654322 1222222 12223333334 44569999999999999999 7999999999986
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-40 Score=357.27 Aligned_cols=205 Identities=12% Similarity=0.088 Sum_probs=167.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.+.. .+++|||| .|++|.+++.+.+ .+++.+++.|+.||+.||.|||++|
T Consensus 87 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~~v~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH~~~ 161 (350)
T d1rdqe_ 87 HTLNEKRILQAVNFPFLVKLEF-SFKDNS---NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLD 161 (350)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCcEeeccc-cccccc---ccccccccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 555543 57999999 9999999995544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.+|++||+|||+|+.....
T Consensus 162 iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~----------------------------------------------- 194 (350)
T d1rdqe_ 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------------------------------- 194 (350)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----------------------------------------------
T ss_pred EecCcCCHHHcccCCCCCEEeeeceeeeecccc-----------------------------------------------
Confidence 999999999999999999999998887432100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....||+.|||||++.+..|+.++|||||||+|
T Consensus 195 ----------------------------------------------~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvil 228 (350)
T d1rdqe_ 195 ----------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLI 228 (350)
T ss_dssp ----------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ----------------------------------------------cccccCccccCCHHHHcCCCCCccccccchhHHH
Confidence 0114789999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....++. .....+...+||.+||++||.+|+ |+++|++||||+..
T Consensus 229 yemltG~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 229 YEMAAGYPPFFADQPI-QIYEKIVSGKVRF-PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCC-CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHHHhCCCCCCCcCHH-HHHHHHhcCCCCC-CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence 99999 77765544 4444444433221 112334556999999999999994 99999999999876
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-40 Score=342.99 Aligned_cols=225 Identities=16% Similarity=0.199 Sum_probs=171.2
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHH
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVY 121 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~ 121 (720)
+.++++.+...... ....-+..+|..+|++++|||||++++ ++..+ .+++|||| .|++|.++|......+++.
T Consensus 31 ~~vAvK~~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~~-~~~~~----~~~lv~Ey~~~g~L~~~l~~~~~~~~~~ 104 (276)
T d1uwha_ 31 GDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAP----QLAIVTQWCEGSSLYHHLHIIETKFEMI 104 (276)
T ss_dssp SEEEEEECCCSSCC-TTHHHHHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCCEEEHHHHHHTSCCCCCHH
T ss_pred CEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeeeE-EEecc----EEEEEEecCCCCCHHHHHhhccCCCCHH
Confidence 33555554433222 222234447888999999999999999 44332 46999999 8899999997666679999
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
.++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||+++........
T Consensus 105 ~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~------------------------ 160 (276)
T d1uwha_ 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS------------------------ 160 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCc------------------------
Confidence 99999999999999999999999999999999999999999999887432111000
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.......||+.|||||
T Consensus 161 ----------------------------------------------------------------~~~~~~~gt~~y~APE 176 (276)
T d1uwha_ 161 ----------------------------------------------------------------HQFEQLSGSILWMAPE 176 (276)
T ss_dssp ---------------------------------------------------------------------CCCCGGGCCHH
T ss_pred ----------------------------------------------------------------ccccccccCcccCCHH
Confidence 0001147899999999
Q ss_pred cccCC---CCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchH-HHHHHHcCCCCCCC
Q 004989 282 ELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKE-ASFCLWLLHPEPSG 351 (720)
Q Consensus 282 ~l~~~---~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~-~~Li~~~L~~dP~~ 351 (720)
++.+. .|+.++|||||||+||||+| ||............+..+..+|. ....+|+. .+||.+||+.||.+
T Consensus 177 ~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~ 256 (276)
T d1uwha_ 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 256 (276)
T ss_dssp HHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGG
T ss_pred HHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhH
Confidence 99653 38999999999999999999 78776666566666666555443 23344544 49999999999999
Q ss_pred CCChHHHHcC
Q 004989 352 RPKMGELLQS 361 (720)
Q Consensus 352 Rpta~eiL~h 361 (720)
|||+.||+++
T Consensus 257 RPt~~~il~~ 266 (276)
T d1uwha_ 257 RPLFPQILAS 266 (276)
T ss_dssp SCCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 9999999874
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=9.9e-40 Score=339.94 Aligned_cols=208 Identities=15% Similarity=0.175 Sum_probs=167.1
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|++++ |||||++++ +++++. .+|+|||| .|++|.++|...+ .+++.+++.|+.||+.||.|||++|
T Consensus 56 ~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~ 130 (277)
T d1phka_ 56 TLKEVDILRKVSGHPNIIQLKD-TYETNT---FFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKLN 130 (277)
T ss_dssp HHHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCeEEEEe-ecccCc---ceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 347889999997 999999999 665554 68999999 8999999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++..+...
T Consensus 131 ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 164 (277)
T d1phka_ 131 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---------------------------------------------- 164 (277)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------------------------------------
T ss_pred CcccccccceEEEcCCCCeEEccchheeEccCCC----------------------------------------------
Confidence 9999999999999999999999999884332110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC------CCCCccccch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIY 295 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~s~~sDIw 295 (720)
.....+||+.|+|||.+.+ ..++.++|||
T Consensus 165 ---------------------------------------------~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~Diw 199 (277)
T d1phka_ 165 ---------------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 199 (277)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHH
T ss_pred ---------------------------------------------ceeeeeccCCCCCHHHhhccccccCCCCCchheEc
Confidence 0011478999999999853 3378999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCC-CCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||+||||++ ||............+.... ++.... ...+...+|+.+||++||.+|||++|+|+||||++.
T Consensus 200 slGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~ 276 (277)
T d1phka_ 200 STGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276 (277)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred ccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence 99999999999 7877665543333333322 233233 344555699999999999999999999999999864
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-39 Score=343.09 Aligned_cols=211 Identities=13% Similarity=0.172 Sum_probs=161.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|++++|||||++++ ++.++. .+|+||||..+.+...+......+++.+++.+++||+.||+|||++||
T Consensus 46 ~~~~Ei~il~~l~hpnIv~~~~-~~~~~~---~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~i 121 (299)
T d1ua2a_ 46 TALREIKLLQELSHPNIIGLLD-AFGHKS---NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 121 (299)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECCTT---CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCEeEEEe-eeccCC---ceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccce
Confidence 4558889999999999999999 565554 479999994444444554555669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+........
T Consensus 122 iHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~---------------------------------------------- 155 (299)
T d1ua2a_ 122 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR---------------------------------------------- 155 (299)
T ss_dssp CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC----------------------------------------------
T ss_pred ecccCCcceEEecCCCccccccCccccccCCCcc----------------------------------------------
Confidence 9999999999999999999999998854322100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
.....+||++|+|||++.+.. |+.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil 191 (299)
T d1ua2a_ 156 --------------------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL 191 (299)
T ss_dssp --------------------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------cccceecChhhccHHHHccCCCCChhhhhhhcchHH
Confidence 001147899999999987654 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC--C--------------------CCcc-----ccccCchHHHHHHHcCCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHR--V--------------------LPPQ-----LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~--~--------------------~p~~-----~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
|||++ ||....... .+..+.+. . .+.. +....+...+||.+||++||++
T Consensus 192 ~el~~g~~pf~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~ 270 (299)
T d1ua2a_ 192 AELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA 270 (299)
T ss_dssp HHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTT
T ss_pred HHHHhCcCCCCCCCHHH-HHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhh
Confidence 99999 565554443 22222110 0 0000 0112344569999999999999
Q ss_pred CCChHHHHcCcccCCCc
Q 004989 352 RPKMGELLQSEFLNEPR 368 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~ 368 (720)
||||.|+|+||||+...
T Consensus 271 R~sa~e~L~Hp~f~~~p 287 (299)
T d1ua2a_ 271 RITATQALKMKYFSNRP 287 (299)
T ss_dssp SCCHHHHHTSGGGTSSS
T ss_pred CcCHHHHhCCHhhCCCC
Confidence 99999999999998754
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-40 Score=351.09 Aligned_cols=204 Identities=18% Similarity=0.241 Sum_probs=164.3
Q ss_pred hhhhhcc-cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~-~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++. .++|||||++++ +++++. .+|+|||| .||+|.++|.... .+++.+++.++.||+.||.|||++|||
T Consensus 51 ~e~~~l~~~~~hp~Iv~~~~-~~~~~~---~~yivmEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH~~~ii 125 (320)
T d1xjda_ 51 VEKRVLSLAWEHPFLTHMFC-TFQTKE---NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIV 125 (320)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhCCCCcEEEEEE-EEccCC---ceeEEEeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4444554 689999999999 665554 58999999 8999999995544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++++||+|||+++.......
T Consensus 126 HrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~----------------------------------------------- 158 (320)
T d1xjda_ 126 YRDLKLDNILLDKDGHIKIADFGMCKENMLGDA----------------------------------------------- 158 (320)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC-----------------------------------------------
T ss_pred eccCcccceeecCCCceeccccchhhhcccccc-----------------------------------------------
Confidence 999999999999999999999998853221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..|+.++|||||||++||
T Consensus 159 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 195 (320)
T d1xjda_ 159 -------------------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 195 (320)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHH
Confidence 0011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
|++ ||.+.... ..+..+....+ .++.. .+...+||.+||.+||.+|||+. ++++||||++.
T Consensus 196 mltG~~PF~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 196 MLIGQSPFHGQDEE-ELFHSIRMDNP--FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHhCCCCCCCCCHH-HHHHHHHcCCC--CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence 999 77765544 44444444322 22223 34455999999999999999995 89999999986
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-40 Score=348.44 Aligned_cols=208 Identities=19% Similarity=0.259 Sum_probs=168.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ ++++.. .+|+|||| .|++|.++|...+..+++.+++.|+.||+.||.|||++||
T Consensus 48 ~~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~i 123 (321)
T d1tkia_ 48 VKKEISILNIARHRNILHLHE-SFESME---ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI 123 (321)
T ss_dssp HHHHHHHHHHSCCTTBCCEEE-EEEETT---EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 347788999999999999999 665553 68999999 8899999997666569999999999999999999999999
Q ss_pred eeccCCCCcEEEccC--CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 143 VVHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 143 vHrDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+||||||+|||++.+ +.+|++|||++.......
T Consensus 124 iHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~--------------------------------------------- 158 (321)
T d1tkia_ 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--------------------------------------------- 158 (321)
T ss_dssp ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---------------------------------------------
T ss_pred CcccccccceeecCCCceEEEEcccchhhccccCC---------------------------------------------
Confidence 999999999999854 479998888874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..|+.++|||||||+
T Consensus 159 ----------------------------------------------~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvi 192 (321)
T d1tkia_ 159 ----------------------------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTL 192 (321)
T ss_dssp ----------------------------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHH
T ss_pred ----------------------------------------------cccccccccccccchhccCCCCCchhhcccHHHH
Confidence 0011468999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||...... ..+..+.+.. ++......++ ...+||.+||.+||.+|||+.|+|+||||++.
T Consensus 193 ly~ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 264 (321)
T d1tkia_ 193 VYVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 999999 77666554 3444444332 3333434444 45599999999999999999999999999764
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-40 Score=351.87 Aligned_cols=211 Identities=18% Similarity=0.244 Sum_probs=159.8
Q ss_pred hhhhhhccc-CCCCCceecccceeec-CCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 65 HSDGVELTH-GDHLRNQGGLSGVCEN-EAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~L~~-l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..++.+ .+|||||++++ +|++ ......+|+|||| .||+|.++|.+. ...+++.+++.|+.||+.||.|||++
T Consensus 52 ~~E~~~~~~~~~hpnIv~l~~-~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~ 130 (335)
T d2ozaa1 52 RREVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 130 (335)
T ss_dssp HHHHHHHHHHTTSTTBCCEEE-EEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCeEEE-EEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc
Confidence 356666554 58999999999 5543 2233468999999 789999999654 35699999999999999999999999
Q ss_pred CceeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 141 GIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++. .+.+||+|||+++......
T Consensus 131 ~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~------------------------------------------ 168 (335)
T d2ozaa1 131 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------------------------------------ 168 (335)
T ss_dssp TEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC------------------------------------------
T ss_pred CCccccccccccccccccccccccccccceeeeccCCC------------------------------------------
Confidence 9999999999999985 4579998888874321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.....+||+.|+|||++.+..|+.++|||||
T Consensus 169 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSl 199 (335)
T d2ozaa1 169 -------------------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 199 (335)
T ss_dssp -------------------------------------------------CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHH
T ss_pred -------------------------------------------------ccccccCCcccCCcHHHcCCCCCHHHHHHhh
Confidence 0011478999999999999889999999999
Q ss_pred hchhhhccc---cCCCCchH---HHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEK---TRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~---~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||+||+|++ ||.+.... ......+.... +|......+ +...+||.+||++||++|||+.|+|+||||.+.
T Consensus 200 Gvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 278 (335)
T d2ozaa1 200 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 278 (335)
T ss_dssp HHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred chhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence 999999999 66543321 11222222222 232223333 445599999999999999999999999999754
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-39 Score=334.49 Aligned_cols=205 Identities=14% Similarity=0.141 Sum_probs=159.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++|||||++++ ++..+. .+|+|||| .+|+|.+++......+++..++.|+.||+.||.|||+++|
T Consensus 47 ~~~E~~~l~~l~HpnIv~~~g-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~i 122 (263)
T d1sm2a_ 47 FIEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122 (263)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCCcccccc-eeccCC---ceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccce
Confidence 347888999999999999999 554443 46999999 8999999997766779999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........
T Consensus 123 iHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~--------------------------------------------- 157 (263)
T d1sm2a_ 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT--------------------------------------------- 157 (263)
T ss_dssp CCTTCSGGGEEECGGGCEEECSCC--------------------------------------------------------
T ss_pred eecccchhheeecCCCCeEecccchheeccCCCce---------------------------------------------
Confidence 99999999999999999999998887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..|+.++|||||||++|
T Consensus 158 --------------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~ 193 (263)
T d1sm2a_ 158 --------------------------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 193 (263)
T ss_dssp ---------------------------------------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------eecceecCcccCChHHhcCCCCCchhhhcchHHHHH
Confidence 001146899999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
||+| |+............+..+..++......+...+|+.+||+.||++|||++||++|
T Consensus 194 el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 194 EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 9998 4444444445566666554433332333455699999999999999999999874
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-39 Score=338.54 Aligned_cols=207 Identities=14% Similarity=0.151 Sum_probs=155.8
Q ss_pred hcccCCCCCceecccceeec-CCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 70 ELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.|+..+|||||++++++... ......+|++||| .++.+..........+++..++.++.||+.||+|||++|||||||
T Consensus 63 ~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDi 142 (305)
T d1blxa_ 63 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL 142 (305)
T ss_dssp HHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCC
Confidence 44556899999999944322 2233468999999 555554444555666999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++..+.+||+|||++.......
T Consensus 143 Kp~NILi~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------- 170 (305)
T d1blxa_ 143 KPQNILVTSSGQIKLADFGLARIYSFQM---------------------------------------------------- 170 (305)
T ss_dssp CGGGEEECTTCCEEECSCCSCCCCCGGG----------------------------------------------------
T ss_pred CccEEEEcCCCCeeecchhhhhhhcccc----------------------------------------------------
Confidence 9999999999999999988873211000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
......||+.|+|||++.+..|+.++|||||||++|||++
T Consensus 171 ---------------------------------------~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g 211 (305)
T d1blxa_ 171 ---------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 211 (305)
T ss_dssp ---------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHC
Confidence 0011478999999999999999999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhc-CCC-----------------------CccccccC-chHHHHHHHcCCCCCCCCCChHHHH
Q 004989 307 --PFSTGEEKTRTMSSLRH-RVL-----------------------PPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~-~~~-----------------------p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
||............+.. +.. .+.+.... +...+||.+||++||++|||+.|+|
T Consensus 212 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L 291 (305)
T d1blxa_ 212 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 291 (305)
T ss_dssp SCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHh
Confidence 77665544322222110 000 01112222 3345999999999999999999999
Q ss_pred cCcccCCC
Q 004989 360 QSEFLNEP 367 (720)
Q Consensus 360 ~hp~~~~~ 367 (720)
+||||++.
T Consensus 292 ~Hpff~~i 299 (305)
T d1blxa_ 292 SHPYFQDL 299 (305)
T ss_dssp TSGGGTTC
T ss_pred cChhhcCc
Confidence 99999876
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-39 Score=338.06 Aligned_cols=202 Identities=13% Similarity=0.139 Sum_probs=160.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ +++++ .+|+|||| .+|+|.+++.+.. .+++.+++.|+.||+.||.|||++|
T Consensus 54 ~~~~E~~il~~l~HpnIv~~~g-~~~~~----~~~lvmE~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH~~~ 127 (277)
T d1xbba_ 54 ELLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESN 127 (277)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCceEEE-EeccC----CEEEEEEcCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHHhCC
Confidence 3448888999999999999999 56543 36899999 8999999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+|++|||+++........
T Consensus 128 iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~-------------------------------------------- 163 (277)
T d1xbba_ 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-------------------------------------------- 163 (277)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE--------------------------------------------
T ss_pred cccCCCcchhhcccccCcccccchhhhhhccccccc--------------------------------------------
Confidence 999999999999999999999999887433111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. .......||+.|+|||++.+..++.++|||||||++
T Consensus 164 -~------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l 200 (277)
T d1xbba_ 164 -Y------------------------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 200 (277)
T ss_dssp -E------------------------------------------EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred -c------------------------------------------ccccccCCCceecCchhhcCCCCCchhhhccchhhh
Confidence 0 000114689999999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHH
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
|||++ ||...... .....+..+..++. +..+|. ..+||.+||+.||.+|||+++|+
T Consensus 201 ~ellt~g~~Pf~~~~~~-~~~~~i~~~~~~~~-p~~~~~~~~~li~~cl~~dp~~RPs~~~i~ 261 (277)
T d1xbba_ 201 WEAFSYGQKPYRGMKGS-EVTAMLEKGERMGC-PAGCPREMYDLMNLCWTYDVENRPGFAAVE 261 (277)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred hHHhhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CcccCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence 99987 67665443 45555555544433 334444 45999999999999999999984
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-39 Score=338.32 Aligned_cols=208 Identities=13% Similarity=0.128 Sum_probs=166.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ +++++ .+|+|||| .+|+|.+++......+++.+++.|+.||+.||.|||++|
T Consensus 55 ~~~~E~~il~~l~HpnIv~l~g-~~~~~----~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~ 129 (285)
T d1u59a_ 55 EMMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 129 (285)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEee-eeccC----eEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4458889999999999999999 56544 47999999 889999998666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++..+..... .
T Consensus 130 iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~--------------------------------~----------- 166 (285)
T d1u59a_ 130 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y----------- 166 (285)
T ss_dssp EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE--------------------------------E-----------
T ss_pred eecCcCchhheeeccCCceeeccchhhhcccccccc--------------------------------c-----------
Confidence 999999999999999999999999988544322100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 167 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l 202 (285)
T d1u59a_ 167 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 202 (285)
T ss_dssp --------------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccccCccccChHHHhCCCCCccchhhcchHHH
Confidence 000113689999999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHH---cCccc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELL---QSEFL 364 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL---~hp~~ 364 (720)
|||+| ||...... ..+..+..+..++.. ..+| ...+||.+||+.||++|||+.+|+ +|+|+
T Consensus 203 ~E~lt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~ 271 (285)
T d1u59a_ 203 WEALSYGQKPYKKMKGP-EVMAFIEQGKRMECP-PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271 (285)
T ss_dssp HHHHTTSCCTTTTCCTH-HHHHHHHTTCCCCCC-TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCC-CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 99987 67665443 455556555444333 3444 445999999999999999999885 45544
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.9e-39 Score=335.40 Aligned_cols=204 Identities=18% Similarity=0.149 Sum_probs=163.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|++++|||||++++ ++.++. .+|++||| .+|+|.++|. .....+++..++.|+.||+.||.|||++|
T Consensus 60 ~~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~ 135 (287)
T d1opja_ 60 FLKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 135 (287)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCEecCCc-cEeeCC---eeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence 347888999999999999999 555543 56999999 8999999994 44556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.++.+||+|||+++........
T Consensus 136 iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~-------------------------------------------- 171 (287)
T d1opja_ 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-------------------------------------------- 171 (287)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSE--------------------------------------------
T ss_pred cccCccccCeEEECCCCcEEEccccceeecCCCCce--------------------------------------------
Confidence 999999999999999999999988887543211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..|+.++|||||||++
T Consensus 172 ---------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l 206 (287)
T d1opja_ 172 ---------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 206 (287)
T ss_dssp ---------------------------------------------EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred ---------------------------------------------eeccccccccccChHHHcCCCCCchhhhhhHHHHH
Confidence 00113578999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||............+..+..++......+...+||.+||+.||.+|||+.||++
T Consensus 207 ~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 207 WEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp HHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 99998 555555555555555555433333233344559999999999999999999976
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1e-38 Score=336.07 Aligned_cols=208 Identities=14% Similarity=0.167 Sum_probs=157.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++..+. .+|+|||| .+|+|.+++......+++.+++.|+.||+.||.|||++|
T Consensus 73 ~~~~E~~~l~~l~HpnIv~l~g-~~~~~~---~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~ 148 (299)
T d1jpaa_ 73 DFLSEASIMGQFDHPNVIHLEG-VVTKST---PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 148 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCccEEE-EEeeCC---EEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4558999999999999999999 554443 57999999 899999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.++.+||+|||+++........
T Consensus 149 iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~-------------------------------------------- 184 (299)
T d1jpaa_ 149 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD-------------------------------------------- 184 (299)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC--------------------------------------------------------
T ss_pred CccCccccceEEECCCCcEEECCcccceEccCCCCc--------------------------------------------
Confidence 999999999999999999999999888543211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.+. .......||+.|+|||++.+..|+.++|||||||+|
T Consensus 185 ~~~-----------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl 223 (299)
T d1jpaa_ 185 PTY-----------------------------------------TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 223 (299)
T ss_dssp ----------------------------------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred cee-----------------------------------------eecccccCCccccCHHHHhcCCCCcccccccchHHH
Confidence 000 000113679999999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+| ||...... ..+..+..+..++......+...+|+.+||+.||.+|||+.||++
T Consensus 224 ~el~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~ 285 (299)
T d1jpaa_ 224 WEVMSYGERPYWDMTNQ-DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN 285 (299)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 99997 66655443 445555554444433333344459999999999999999999986
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-39 Score=338.89 Aligned_cols=208 Identities=14% Similarity=0.135 Sum_probs=164.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|++++|||||++++ ++.++ .+|+|||| .+|+|.+++.. ....+++.+++.|+.||+.||.|||++|
T Consensus 55 ~~~E~~~l~~l~HpnIv~~~g-~~~~~----~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ 129 (272)
T d1qpca_ 55 FLAEANLMKQLQHQRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129 (272)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCEeEEEe-eeccC----CeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347888999999999999999 55443 36899999 99999998833 2235899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||||+.++.+||+|||+++........
T Consensus 130 ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~-------------------------------------------- 165 (272)
T d1qpca_ 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-------------------------------------------- 165 (272)
T ss_dssp EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE--------------------------------------------
T ss_pred cccCccchhheeeecccceeeccccceEEccCCccc--------------------------------------------
Confidence 999999999999999999999998888432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 166 ---------------------------------------------~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl 200 (272)
T d1qpca_ 166 ---------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200 (272)
T ss_dssp ---------------------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCcccccChHHHhCCCCCchhhhhhhHHHH
Confidence 00113689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc--CcccC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~--hp~~~ 365 (720)
|||+| |+.........+..+..+..++......+...+|+.+||+.||++|||+.||++ ++||+
T Consensus 201 ~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 99998 444444455666666665444333233344559999999999999999999987 67764
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-38 Score=333.64 Aligned_cols=233 Identities=16% Similarity=0.209 Sum_probs=170.3
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH-hCCCCCCCHH
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVY 121 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~ 121 (720)
..++++++.... ......-+..+|..+|++++|||||++++ ++.++. .+|+||||.++++.+++ ......+++.
T Consensus 28 ~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~-~~~~~~---~~~iv~e~~~~~~~~~~~~~~~~~l~e~ 102 (298)
T d1gz8a_ 28 EVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD-VIHTEN---KLYLVFEFLHQDLKKFMDASALTGIPLP 102 (298)
T ss_dssp CEEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTTTTCCCHH
T ss_pred CEEEEEEEehhh-cChHHHHHHHHHHHHHHhCCCCcEEEecc-cccccc---ceeEEEeecCCchhhhhhhhcccCCCHH
Confidence 344555543322 22222334557889999999999999999 555543 68999999767777766 4445569999
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.++.||+.||.|||++|||||||||+|||++.++.+||+|||.++....+.
T Consensus 103 ~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~-------------------------- 156 (298)
T d1gz8a_ 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-------------------------- 156 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS--------------------------
T ss_pred HHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCc--------------------------
Confidence 999999999999999999999999999999999999999999998874321110
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
+ ......||+.|+|||
T Consensus 157 -------~---------------------------------------------------------~~~~~~gt~~y~apE 172 (298)
T d1gz8a_ 157 -------R---------------------------------------------------------TYTHEVVTLWYRAPE 172 (298)
T ss_dssp -------B---------------------------------------------------------CTTCCBCCCTTCCHH
T ss_pred -------c---------------------------------------------------------cceeecccceeeehh
Confidence 0 001147899999999
Q ss_pred cccCCC-CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCc---------------------------cc
Q 004989 282 ELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---------------------------QL 330 (720)
Q Consensus 282 ~l~~~~-~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---------------------------~~ 330 (720)
++.... ++.++|||||||++|+|++ ||...+........+.....+. ..
T Consensus 173 ~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
T d1gz8a_ 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252 (298)
T ss_dssp HHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHS
T ss_pred hhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhc
Confidence 987776 5899999999999999999 7776554433333222100000 00
Q ss_pred cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 331 ~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
....+...+|+.+||++||.+|||+.|+|+||||++...+
T Consensus 253 ~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p 292 (298)
T d1gz8a_ 253 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292 (298)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence 1112344599999999999999999999999999987554
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-39 Score=333.75 Aligned_cols=204 Identities=17% Similarity=0.226 Sum_probs=157.0
Q ss_pred hchhhhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
|..+|..+|++++ |||||++++ ++++.. .+|+|||| .+ ++|.+++.+.. .+++.+++.|+.||+.||+|||
T Consensus 53 ~~~~E~~il~~l~~~h~nIv~~~~-~~~~~~---~~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH 127 (273)
T d1xwsa_ 53 RVPMEVVLLKKVSSGFSGVIRLLD-WFERPD---SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 127 (273)
T ss_dssp EEEHHHHHHHHHCSSSCSBCCEEE-EEECSS---EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCccEEEE-EEeeCC---eEEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 4557888998876 999999999 665554 57999999 44 68888885543 4999999999999999999999
Q ss_pred HCCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++|||||||||+|||++. .+.+||+|||++......
T Consensus 128 ~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~------------------------------------------- 164 (273)
T d1xwsa_ 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------------------------------------- 164 (273)
T ss_dssp HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS-------------------------------------------
T ss_pred HCCCccccCcccceEEecCCCeEEECccccceecccc-------------------------------------------
Confidence 999999999999999985 478999998887321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwS 296 (720)
......||+.|+|||++.+..+ +.++||||
T Consensus 165 -------------------------------------------------~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwS 195 (273)
T d1xwsa_ 165 -------------------------------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 195 (273)
T ss_dssp -------------------------------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHH
T ss_pred -------------------------------------------------cccccccCCCcCCHHHHcCCCCCCccccccc
Confidence 0011478999999999987764 67899999
Q ss_pred hhchhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 297 LGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 297 LGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++|||+++..++......... ...+++. ..++..+||.+||.+||++|||++|+|+||||++..
T Consensus 196 lGvilyell~g~~Pf~~~~~i~~~--~~~~~~~---~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~ 262 (273)
T d1xwsa_ 196 LGILLYDMVCGDIPFEHDEEIIRG--QVFFRQR---VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 262 (273)
T ss_dssp HHHHHHHHHHSSCSCCSHHHHHHC--CCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred ceeeehhHhhCCCCCCCchHHhhc--ccCCCCC---CCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence 999999999933332222221111 1122222 234455999999999999999999999999998764
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.9e-39 Score=334.81 Aligned_cols=215 Identities=19% Similarity=0.300 Sum_probs=163.8
Q ss_pred hhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+..+|..+|++++|||||++++.+.........+|+|||| .|++|.+++...+ .+++.+++.|+.||+.||+|||+
T Consensus 51 ~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH~ 129 (277)
T d1o6ya_ 51 YLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQ 129 (277)
T ss_dssp HHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 345568899999999999999999555444444468999999 8999999985544 49999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.++.++++|||.+.........
T Consensus 130 ~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~------------------------------------------ 167 (277)
T d1o6ya_ 130 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS------------------------------------------ 167 (277)
T ss_dssp TTEECCCCSGGGEEEETTSCEEECCCTTCEECC-----------------------------------------------
T ss_pred CCccCccccCcccccCccccceeehhhhhhhhcccccc------------------------------------------
Confidence 99999999999999999999999999876332111000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.......+||+.|+|||++.+..|++++|||||||
T Consensus 168 ---------------------------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGv 202 (277)
T d1o6ya_ 168 ---------------------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 202 (277)
T ss_dssp --------------------------------------------------------TTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccccCcccccCHHHHcCCCCCcceecccchH
Confidence 00011257999999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccCch-HHHHHHHcCCCCCCCCC-ChHHHHcCccc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFPK-EASFCLWLLHPEPSGRP-KMGELLQSEFL 364 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~p~-~~~Li~~~L~~dP~~Rp-ta~eiL~hp~~ 364 (720)
++|||++ ||............+.....++. ....+|. ..+||.+||++||.+|| |++++ .|+|+
T Consensus 203 ilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l-~~~l~ 272 (277)
T d1o6ya_ 203 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM-RADLV 272 (277)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH-HHHHH
T ss_pred HHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHH-HHHHH
Confidence 9999999 78776666555666666555443 3344544 45999999999999999 55555 45654
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-39 Score=340.24 Aligned_cols=206 Identities=15% Similarity=0.118 Sum_probs=160.7
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------------------CCC
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----------------------~~l 118 (720)
+..+|..+|.++ +|||||++++ ++.+.. .+|+|||| .||+|.++|.... ..+
T Consensus 86 ~~~~E~~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 161 (325)
T d1rjba_ 86 ALMSELKMMTQLGSHENIVNLLG-ACTLSG---PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 161 (325)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred HHHHHHHHHHHhcCCCcEeEEEE-EEeeCC---eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCC
Confidence 344677788887 8999999999 555544 56999999 9999999995432 248
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.|+.||+.||.|||++|||||||||+|||++.++.+||+|||+++......
T Consensus 162 ~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~----------------------- 218 (325)
T d1rjba_ 162 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS----------------------- 218 (325)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCT-----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCC-----------------------
Confidence 999999999999999999999999999999999999999999999888874321110
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.. .......||+.||
T Consensus 219 ----------~~-------------------------------------------------------~~~~~~~gt~~y~ 233 (325)
T d1rjba_ 219 ----------NY-------------------------------------------------------VVRGNARLPVKWM 233 (325)
T ss_dssp ----------TS-------------------------------------------------------EEETTEEECGGGC
T ss_pred ----------ce-------------------------------------------------------eeeccccCCCccC
Confidence 00 0001146899999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rp 353 (720)
|||++.+..|+.++|||||||+||||++ ||............+..+..++ .+..+| ...+||.+||+.||++||
T Consensus 234 aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~-~p~~~~~~l~~li~~cl~~dP~~RP 312 (325)
T d1rjba_ 234 APESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD-QPFYATEEIYIIMQSCWAFDSRKRP 312 (325)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred ChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-CCCcCCHHHHHHHHHHcCCChhHCc
Confidence 9999999999999999999999999996 6766554444444444443333 333444 455999999999999999
Q ss_pred ChHHHHcC
Q 004989 354 KMGELLQS 361 (720)
Q Consensus 354 ta~eiL~h 361 (720)
|++||++|
T Consensus 313 t~~ei~~~ 320 (325)
T d1rjba_ 313 SFPNLTSF 320 (325)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999874
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-38 Score=337.58 Aligned_cols=211 Identities=16% Similarity=0.234 Sum_probs=163.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|++++|||||++++ ++.... ....+|+||||.|.+|..+++.. .+++..++.+++||+.||.|||+
T Consensus 63 ~~~~Ei~il~~l~hpniv~l~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~ 139 (346)
T d1cm8a_ 63 RAYRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHA 139 (346)
T ss_dssp HHHHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeeEEEE-EeccCccccccceEEEEEecccccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHh
Confidence 4558999999999999999999 554332 23457999999988999988543 39999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.++.+|++|||.+......
T Consensus 140 ~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~--------------------------------------------- 174 (346)
T d1cm8a_ 140 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--------------------------------------------- 174 (346)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---------------------------------------------
T ss_pred CCCcccccCcchhhcccccccccccccceeccCCc---------------------------------------------
Confidence 99999999999999999999999988887432110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
.+..+||+.|+|||++.+.. ++.++||||||
T Consensus 175 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 206 (346)
T d1cm8a_ 175 ------------------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 206 (346)
T ss_dssp ------------------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred ------------------------------------------------cccccccccccCHHHHcCCCCCCccchhhcch
Confidence 01147899999999997754 79999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CCC----------------------------CccccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVL----------------------------PPQLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~----------------------------p~~~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||.+............. +.. +..+....+...+||.+||+
T Consensus 207 vil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~ 286 (346)
T d1cm8a_ 207 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 286 (346)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCc
Confidence 99999999 67665443222211110 000 01111233455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+|||+.|+|+||||+...+
T Consensus 287 ~dP~~R~ta~eiL~Hp~f~~~~~ 309 (346)
T d1cm8a_ 287 LDAEQRVTAGEALAHPYFESLHD 309 (346)
T ss_dssp SSTTTSCCHHHHHHSGGGTTTC-
T ss_pred CChhHCcCHHHHhcChhhCcCCC
Confidence 99999999999999999998644
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-38 Score=328.53 Aligned_cols=204 Identities=18% Similarity=0.173 Sum_probs=156.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.++ .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 54 ~~~~E~~~l~~l~HpnIv~l~~-~~~~~----~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ 128 (273)
T d1mp8a_ 54 KFLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 128 (273)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSS----SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecC----eEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccC
Confidence 3447888999999999999999 55432 47999999 899999988666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||+++.++.+||+|||+++.......
T Consensus 129 iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~--------------------------------------------- 163 (273)
T d1mp8a_ 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY--------------------------------------------- 163 (273)
T ss_dssp CCCSCCSGGGEEEEETTEEEECC---------------------------------------------------------
T ss_pred eeccccchhheeecCCCcEEEccchhheeccCCcc---------------------------------------------
Confidence 99999999999999999999999888743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..|+.++|||||||++
T Consensus 164 --------------------------------------------~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil 199 (273)
T d1mp8a_ 164 --------------------------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 199 (273)
T ss_dssp ---------------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred --------------------------------------------eeccceecCcccchhhHhccCCCCCccccccchHHH
Confidence 000113679999999999998999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++ ||...... .....+..+..++......+...+||.+||..||.+|||+.||+++
T Consensus 200 ~e~lt~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 200 WEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 99987 56554443 4445555554444333333445699999999999999999999863
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.3e-37 Score=325.33 Aligned_cols=211 Identities=17% Similarity=0.205 Sum_probs=159.8
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
-+..+|..+|++++|||||++++ ++..+. .+|++|||.++.+...+......+++..++.|+.||+.||+|||++|
T Consensus 45 ~~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 120 (286)
T d1ob3a_ 45 STTIREISILKELKHSNIVKLYD-VIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120 (286)
T ss_dssp HHHHHHHHGGGGCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEeeee-ecccCC---ceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCc
Confidence 35558899999999999999999 555543 57999999555666666555566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+|++|||.+...+.+. .
T Consensus 121 IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~----------------------------------~----------- 155 (286)
T d1ob3a_ 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPV----------------------------------R----------- 155 (286)
T ss_dssp CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------------------------------------------------
T ss_pred EEecCCCCceeeEcCCCCEEecccccceecccCc----------------------------------c-----------
Confidence 9999999999999999999999999873321110 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.+.. +++++|||||||+
T Consensus 156 ---------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~ 190 (286)
T d1ob3a_ 156 ---------------------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190 (286)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccceecccchhhhHHHHhCCCCCCcceeehhcCcH
Confidence 001136899999999997655 7999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhc-CCC-------------------------Cccccc-cCchHHHHHHHcCCCCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRH-RVL-------------------------PPQLLL-KFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~-~~~-------------------------p~~~~~-~~p~~~~Li~~~L~~dP~ 350 (720)
+|||++ ||............... +.. .+.+.. ..+...+||.+||++||+
T Consensus 191 l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~ 270 (286)
T d1ob3a_ 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPN 270 (286)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTT
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChh
Confidence 999999 77665544332222110 000 011111 223445999999999999
Q ss_pred CCCChHHHHcCcccCC
Q 004989 351 GRPKMGELLQSEFLNE 366 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~ 366 (720)
+|||+.|+|+||||++
T Consensus 271 ~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 271 QRITAKQALEHAYFKE 286 (286)
T ss_dssp TSCCHHHHHTSGGGGC
T ss_pred HCcCHHHHhcCcccCc
Confidence 9999999999999974
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-37 Score=326.11 Aligned_cols=237 Identities=12% Similarity=0.170 Sum_probs=166.2
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecC----CCCCcEEEEEecCCCCHHHHHhCCCCCC
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSV 118 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~----~~~~~~~lv~E~~ggsL~~~L~~~~~~l 118 (720)
+.++++++..... ......+..+|..+|++++||||+++++.+.... .....+|++|||.++.+...+......+
T Consensus 36 ~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~ 114 (318)
T d3blha1 36 QKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF 114 (318)
T ss_dssp CEEEEEEC----C-TTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCC
T ss_pred CEEEEEEEehhhc-chHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhccccc
Confidence 3444444433222 2223334458888999999999999999443221 1124689999996666666665666679
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++..++.|++||+.||.|||++|||||||||+|||++.++.+|++|||++...+.....
T Consensus 115 ~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~--------------------- 173 (318)
T d3blha1 115 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS--------------------- 173 (318)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-------------------------
T ss_pred ccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeeccccccc---------------------
Confidence 99999999999999999999999999999999999999999999999988543222100
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.. ......+||++|+
T Consensus 174 ----------~~-------------------------------------------------------~~~~~~~gT~~Y~ 188 (318)
T d3blha1 174 ----------QP-------------------------------------------------------NRYTNRVVTLWYR 188 (318)
T ss_dssp -----------C-------------------------------------------------------CCCCSCCSCGGGC
T ss_pred ----------cc-------------------------------------------------------ccccceecCHHHh
Confidence 00 0001147899999
Q ss_pred CcccccCC-CCCccccchhhhchhhhccc---cCCCCchHHHHHH--HhhcCCCCcccc---------------------
Q 004989 279 SPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMS--SLRHRVLPPQLL--------------------- 331 (720)
Q Consensus 279 APE~l~~~-~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~--~l~~~~~p~~~~--------------------- 331 (720)
|||++.+. .|++++|||||||++|||++ ||.+......... .+... +++...
T Consensus 189 aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T d3blha1 189 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS-ITPEVWPNVDNYELYEKLELVKGQKRK 267 (318)
T ss_dssp CHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC-CCTTTSTTCCCC-------CCSSCCBC
T ss_pred hHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCC-CChhhccccchhhhhhhhccccccccc
Confidence 99999876 48999999999999999999 6765544322211 11111 111100
Q ss_pred --------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 332 --------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 --------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+...+||.+||++||++|||++|+|+||||+..
T Consensus 268 ~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~ 311 (318)
T d3blha1 268 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 311 (318)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred chhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence 012344589999999999999999999999999864
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-37 Score=319.66 Aligned_cols=202 Identities=15% Similarity=0.204 Sum_probs=163.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++++++|||||++++ ++.+.. .+++|||| .+|+|.+++......+++..++.|+.||+.||.|||++||+
T Consensus 47 ~~Ev~~~~~l~HpnIv~~~g-~~~~~~---~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~ii 122 (258)
T d1k2pa_ 47 IEEAKVMMNLSHEKLVQLYG-VCTKQR---PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 122 (258)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EECCSS---SEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHhcCCCceeeEEE-EEeeCC---ceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 36788999999999999999 555443 58999999 88999999866666699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||+++...... +
T Consensus 123 H~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~----------------------------------~------------- 155 (258)
T d1k2pa_ 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----------------------------------Y------------- 155 (258)
T ss_dssp CSCCSGGGEEECTTCCEEECCCSSCCBCSSSS----------------------------------C-------------
T ss_pred cccccceeEEEcCCCcEEECcchhheeccCCC----------------------------------c-------------
Confidence 99999999999999999999988874321110 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.......||+.|+|||++.+..++.++|||||||++||
T Consensus 156 ------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~e 193 (258)
T d1k2pa_ 156 ------------------------------------------TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 193 (258)
T ss_dssp ------------------------------------------CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHh
Confidence 00011468999999999999999999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|+| ||...... .....+..+..++. +...| ...+||.+||+.||++|||+.+||+|
T Consensus 194 l~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~-p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 194 IYSLGKMPYERFTNS-ETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHTTSCCTTTTSCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHhCCCCCC-cccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 997 67665543 45555655543333 33444 45599999999999999999999986
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-38 Score=335.55 Aligned_cols=218 Identities=15% Similarity=0.138 Sum_probs=163.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|||||++++ ++.... ....+|++|++.|++|.+++... .+++.+++.++.||+.||+|||++
T Consensus 52 ~~~~Ei~il~~l~hp~iv~~~~-~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~ 128 (345)
T d1pmea_ 52 RTLREIKILLRFRHENIIGIND-IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA 128 (345)
T ss_dssp HHHHHHHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCcEEE-EEeeccccccceEEEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4457889999999999999999 443332 22346777777999999999654 399999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.++.+||+|||++.........
T Consensus 129 ~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~------------------------------------------- 165 (345)
T d1pmea_ 129 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH------------------------------------------- 165 (345)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB-------------------------------------------
T ss_pred CCcCCCCCcceEEECCCCCEEEcccCceeeccCCCcc-------------------------------------------
Confidence 9999999999999999999999999987432111000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
.......+||+.|+|||++... .++.++||||+||
T Consensus 166 --------------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~ 201 (345)
T d1pmea_ 166 --------------------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201 (345)
T ss_dssp --------------------------------------------CCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHH
T ss_pred --------------------------------------------ceeeccccccceechHHHhhcCCCCCchhhhhccCc
Confidence 0000124789999999998554 4799999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC-------------------------Cc---c-ccccCchHHHHHHHcCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL-------------------------PP---Q-LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~-------------------------p~---~-~~~~~p~~~~Li~~~L~~ 347 (720)
++|||++ ||............+..... +. . +....++..+|+.+||++
T Consensus 202 il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 281 (345)
T d1pmea_ 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF 281 (345)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCS
T ss_pred eehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccC
Confidence 9999999 77665443222222111000 00 0 112234556999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccc
Q 004989 348 EPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+|||+.|+|+||||+....+
T Consensus 282 dP~~R~ta~e~L~hpf~~~~~~~ 304 (345)
T d1pmea_ 282 NPHKRIEVEQALAHPYLEQYYDP 304 (345)
T ss_dssp STTTSCCHHHHHTSGGGTTTCCG
T ss_pred ChhHCcCHHHHhcCHhhccCCCC
Confidence 99999999999999999976554
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-37 Score=324.13 Aligned_cols=207 Identities=12% Similarity=0.114 Sum_probs=161.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.+.. .++++||| .+++|.+++......+++.++..++.||+.||.|||++|
T Consensus 55 ~~~~E~~il~~l~H~nIv~~~g-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~ 130 (283)
T d1mqba_ 55 DFLGEAGIMGQFSHHNIIRLEG-VISKYK---PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 130 (283)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCEeeeeE-EEecCC---ceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccc
Confidence 3447888999999999999999 554443 57999999 899999988666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||||+.++.+||+|||+++........ .
T Consensus 131 iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~-------------------------------~------------ 167 (283)
T d1mqba_ 131 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------T------------ 167 (283)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCCCC------------------------------------------------------
T ss_pred cccCccccceEEECCCCeEEEcccchhhcccCCCcc-------------------------------c------------
Confidence 999999999999999999999988887432111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 168 --------------------------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil 203 (283)
T d1mqba_ 168 --------------------------------------------YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM 203 (283)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------eEeccCCCCccccCHHHHccCCCCCcccccccHHHH
Confidence 000113679999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ |+.........+..+..+..++......+...+|+.+||+.||++|||+.||++
T Consensus 204 ~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 204 WEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 99998 555444455666666666554443333334459999999999999999999986
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-38 Score=326.58 Aligned_cols=209 Identities=14% Similarity=0.135 Sum_probs=164.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|+.+|++++|||||++++ ++.++ .+++|||| .+|+|..++. .....+++.+++.|+.||+.||.|||++|
T Consensus 59 ~~~E~~~l~~l~h~nIv~~~g-~~~~~----~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ 133 (285)
T d1fmka3 59 FLQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 133 (285)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcccCCEeEEEE-EEecC----CeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh
Confidence 346788999999999999999 55433 36899999 9999999883 23345999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||||+.++.+||+|||+++........
T Consensus 134 ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~-------------------------------------------- 169 (285)
T d1fmka3 134 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------------------------------------------- 169 (285)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCCTTC----------------------------------------------------
T ss_pred eecccccceEEEECCCCcEEEcccchhhhccCCCce--------------------------------------------
Confidence 999999999999999999999999988433111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 170 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil 204 (285)
T d1fmka3 170 ---------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 204 (285)
T ss_dssp ---------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------eeccccccccccChHHHhCCCCCcHHhhhcchHHH
Confidence 00113689999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc--CcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ--SEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~--hp~~~~~ 367 (720)
|||++ ||.........+..+..+..++. ...+++ ..+||.+||+.||++|||+.+|++ ++||+..
T Consensus 205 ~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 205 TELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp HHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 99998 55544444555666665544443 334444 459999999999999999999988 8888765
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-37 Score=333.28 Aligned_cols=214 Identities=16% Similarity=0.194 Sum_probs=160.3
Q ss_pred hhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..+|++++|||||++++.++... ....++|+||||.+++|.+.+. .....+++.+++.|++||+.||+|||+
T Consensus 61 ~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~ 140 (350)
T d1q5ka_ 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140 (350)
T ss_dssp CHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 36888999999999999999554432 2344689999996666665552 344569999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+|||||||||+|||++.++ .+||+|||++.......
T Consensus 141 ~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 177 (350)
T d1q5ka_ 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE------------------------------------------- 177 (350)
T ss_dssp TTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS-------------------------------------------
T ss_pred cCCcccCCCcceEEEecCCCceeEecccchhhccCCc-------------------------------------------
Confidence 9999999999999999775 89999988874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
.....+||+.|+|||++.+. .|+.++|||||
T Consensus 178 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSl 209 (350)
T d1q5ka_ 178 ------------------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSA 209 (350)
T ss_dssp ------------------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------ccccccccccccChHHhhcccCCCcceeeccc
Confidence 00114789999999998765 58999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc------------------CCCCcc---------ccccCchHHHHHHHcCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPPQ---------LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~------------------~~~p~~---------~~~~~p~~~~Li~~~L~~ 347 (720)
||++|||++ ||............+.. ..++.. .....++..+||.+||.+
T Consensus 210 G~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~ 289 (350)
T d1q5ka_ 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289 (350)
T ss_dssp HHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCS
T ss_pred ceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccC
Confidence 999999999 67665544322222110 001100 011234556999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004989 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||++..+
T Consensus 290 dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 290 TPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp SGGGSCCHHHHHTSGGGGGGGC
T ss_pred ChhHCcCHHHHhcCHhhccccC
Confidence 9999999999999999987643
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-37 Score=329.36 Aligned_cols=253 Identities=14% Similarity=0.168 Sum_probs=176.5
Q ss_pred cccccc---ccCCcccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeec
Q 004989 20 DSAWQD---SDSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCEN 89 (720)
Q Consensus 20 ~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~ 89 (720)
.+.|+- ....+.+|.|+++. .+.+.++++++... ..+....-+..+|+.+|++++|||||++++ ++..
T Consensus 11 ~~~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~-~~~~ 88 (348)
T d2gfsa1 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFTP 88 (348)
T ss_dssp SSEEEEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCT-TSSHHHHHHHHHHHHHHHHCCCTTBCCCSE-EECS
T ss_pred CccccCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECch-hcChHHHHHHHHHHHHHHhcCCCCeeeEEE-EEee
Confidence 455642 22344555555554 23334444443321 112222335558999999999999999999 4433
Q ss_pred C---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecC
Q 004989 90 E---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 90 ~---~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
. .....+++++++.|++|.+++... .+++.+++.|++||+.||+|||++||+||||||+|||++.++.+|++|||
T Consensus 89 ~~~~~~~~~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg 166 (348)
T d2gfsa1 89 ARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 166 (348)
T ss_dssp CSSTTTCCCCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC-
T ss_pred ccccccCceEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccc
Confidence 2 223346676666999999999443 49999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004989 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
.+...+..
T Consensus 167 ~a~~~~~~------------------------------------------------------------------------ 174 (348)
T d2gfsa1 167 LARHTDDE------------------------------------------------------------------------ 174 (348)
T ss_dssp ---CCTGG------------------------------------------------------------------------
T ss_pred hhcccCcc------------------------------------------------------------------------
Confidence 87322100
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhhhccc---cCCCCchHHHHHHHhh
Q 004989 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR 322 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~ 322 (720)
.....||+.|+|||++.+.. ++.++|||||||++|+|++ ||.+.+........+.
T Consensus 175 ---------------------~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~ 233 (348)
T d2gfsa1 175 ---------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233 (348)
T ss_dssp ---------------------GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred ---------------------cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 01146899999999987765 6899999999999999999 6766544432222221
Q ss_pred cCCCC-c----------------------------cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 323 HRVLP-P----------------------------QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 323 ~~~~p-~----------------------------~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
....+ . .+....+...+||.+||++||.+|||+.|+|+||||++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~ 309 (348)
T d2gfsa1 234 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309 (348)
T ss_dssp HHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred hcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence 11110 0 01123345569999999999999999999999999998654
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-37 Score=324.97 Aligned_cols=204 Identities=15% Similarity=0.125 Sum_probs=162.8
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~ 125 (720)
+..+|..+|+++ +|||||++++ ++.++. .+|+|||| .||+|.++|... ...+++..++.
T Consensus 56 ~~~~E~~~l~~l~~HpnIv~~~~-~~~~~~---~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 131 (309)
T d1fvra_ 56 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131 (309)
T ss_dssp HHHHHHHHHTTCCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred HHHHHHHHHHhccCCCCEeeEEE-EEecCC---eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHH
Confidence 445888899998 7999999999 555443 57999999 999999999543 34699999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++|||||||||+|||++.++.+||+|||+++......
T Consensus 132 ~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~------------------------------ 181 (309)
T d1fvra_ 132 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV------------------------------ 181 (309)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC------------------------------
T ss_pred HHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccc------------------------------
Confidence 99999999999999999999999999999999999999888874321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
......||+.|+|||.+.+
T Consensus 182 -------------------------------------------------------------~~~~~~gt~~y~aPE~l~~ 200 (309)
T d1fvra_ 182 -------------------------------------------------------------KKTMGRLPVRWMAIESLNY 200 (309)
T ss_dssp -------------------------------------------------------------CC----CCTTTCCHHHHHH
T ss_pred -------------------------------------------------------------cccceecCCcccchHHhcc
Confidence 0001357999999999999
Q ss_pred CCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..|+.++|||||||++|||++ |+.........+..+..+..++......+...+||.+||+.||++|||+.||+++
T Consensus 201 ~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 201 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999999999998 3333344446666666655544433444556699999999999999999999974
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-36 Score=315.70 Aligned_cols=232 Identities=15% Similarity=0.165 Sum_probs=170.4
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCH
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDV 120 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~ 120 (720)
.+.++++.+.... ......-+..+|..+|++++|||||++++ ++.+.. .++++||+ .|++|..++.. .+.+++
T Consensus 27 ~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~-~~~~~~---~~~iv~~~~~~~~l~~~~~~-~~~~~~ 100 (292)
T d1unla_ 27 HEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHD-VLHSDK---KLTLVFEFCDQDLKKYFDSC-NGDLDP 100 (292)
T ss_dssp CCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCSEEHHHHHHHT-TTCCCH
T ss_pred CcEEEEEEEehhh-CChHHHHHHHHHHHHHHhcCcCCEEeecc-cccccc---ceeEEeeecccccccccccc-ccccch
Confidence 3444555543322 22223345568999999999999999999 565554 57999999 77777776644 445999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhh
Q 004989 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
..++.++.|++.||+|||++|||||||||+|||++.++.+|++|||.+.........
T Consensus 101 ~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~----------------------- 157 (292)
T d1unla_ 101 EIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC----------------------- 157 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC-----------------------
T ss_pred hHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCcc-----------------------
Confidence 999999999999999999999999999999999999999999999988543221000
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCc
Q 004989 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.....+++.|+||
T Consensus 158 -------------------------------------------------------------------~~~~~~~~~~~~p 170 (292)
T d1unla_ 158 -------------------------------------------------------------------YSAEVVTLWYRPP 170 (292)
T ss_dssp -------------------------------------------------------------------CCSCCSCGGGCCH
T ss_pred -------------------------------------------------------------------ceeeccccchhhh
Confidence 0013568899999
Q ss_pred ccccCCC-CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhc---CCC------------------------Ccc
Q 004989 281 EELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH---RVL------------------------PPQ 329 (720)
Q Consensus 281 E~l~~~~-~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~---~~~------------------------p~~ 329 (720)
|++.+.. ++.++|||||||++|||++ ||.........+..+.. ... ...
T Consensus 171 e~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (292)
T d1unla_ 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVN 250 (292)
T ss_dssp HHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTT
T ss_pred hHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhh
Confidence 9998776 6999999999999999998 65544443333333221 000 000
Q ss_pred cccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 330 LLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 330 ~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.... .+...+|+.+||++||.+||||+|+|+||||++...
T Consensus 251 ~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~~ 291 (292)
T d1unla_ 251 VVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291 (292)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCSC
T ss_pred ccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCCC
Confidence 1111 234459999999999999999999999999987643
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-37 Score=319.80 Aligned_cols=205 Identities=16% Similarity=0.089 Sum_probs=159.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.++ .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 57 ~~~~Ei~~l~~l~H~nIv~~~g-~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ 131 (273)
T d1u46a_ 57 DFIREVNAMHSLDHRNLIRLYG-VVLTP----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131 (273)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEeec----chheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence 4457888999999999999999 55543 35899999 899999988555556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........
T Consensus 132 iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~-------------------------------------------- 167 (273)
T d1u46a_ 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-------------------------------------------- 167 (273)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE--------------------------------------------
T ss_pred EeeeeecHHHhccccccceeeccchhhhhcccCCCc--------------------------------------------
Confidence 999999999999999999999999988543221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. .......||..|+|||++.+..++.++|||||||++
T Consensus 168 ------------------------~-------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil 204 (273)
T d1u46a_ 168 ------------------------Y-------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204 (273)
T ss_dssp ------------------------E-------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c-------------------eecCccccCcccCCHHHHhCCCCCcchhhhhhHHHH
Confidence 0 000113578899999999998899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...............+..++. +..+| ...+||.+||++||++|||+.||++
T Consensus 205 ~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 205 WEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-PEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCC-cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99997 67665555333333344433333 34444 4559999999999999999999863
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-37 Score=324.66 Aligned_cols=205 Identities=15% Similarity=0.116 Sum_probs=161.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.++ ..+++||+ .+++|.+++......+++..++.|+.||+.||.|||++|
T Consensus 57 ~~~~E~~~l~~l~HpnIv~l~g-~~~~~----~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ 131 (317)
T d1xkka_ 57 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 131 (317)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecC----CeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3457888999999999999999 55444 35677777 999999999766677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++++||+|||+++........
T Consensus 132 iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-------------------------------------------- 167 (317)
T d1xkka_ 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-------------------------------------------- 167 (317)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC---------------------------------------------
T ss_pred cccCcchhhcceeCCCCCeEeeccccceeccccccc--------------------------------------------
Confidence 999999999999999999999998887433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..|+.++|||||||++
T Consensus 168 --------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil 203 (317)
T d1xkka_ 168 --------------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 203 (317)
T ss_dssp ---------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccccCccccChHHHhcCCCChhhhhhhHHHHH
Confidence 000113689999999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||+| ||...... .....+..+..++......+...+|+.+||+.||.+|||+.||++|
T Consensus 204 ~el~t~g~~p~~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 204 WELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp HHHHTTSCCTTTTSCGG-GHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 99998 55544332 3445555554444333334455699999999999999999999975
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-37 Score=319.46 Aligned_cols=199 Identities=16% Similarity=0.136 Sum_probs=156.2
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|++++|||||++++.+.+... .+|+|||| .+|+|.++|.+. ...+++..++.|+.||+.||.|||+.+|
T Consensus 48 ~~E~~~l~~l~HpnIv~~~g~~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~i 124 (262)
T d1byga_ 48 LAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 124 (262)
T ss_dssp HHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCEeeEEEEEEecCC---cEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCce
Confidence 377889999999999999994444332 36999999 899999999432 2348999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+|++|||+++.....
T Consensus 125 vH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~------------------------------------------------ 156 (262)
T d1byga_ 125 VHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------------------------------------ 156 (262)
T ss_dssp CCSCCSGGGEEECTTSCEEECCCCC-------------------------------------------------------
T ss_pred eccccchHhheecCCCCEeecccccceecCCC------------------------------------------------
Confidence 99999999999999999999988887432110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+|+.|+|||++.+..+++++|||||||++|
T Consensus 157 ---------------------------------------------~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~ 191 (262)
T d1byga_ 157 ---------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 191 (262)
T ss_dssp --------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ---------------------------------------------CccccccccCCChHHHhCCCCChHHHHHhHHHHHH
Confidence 00135688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||+| ||... ........+..+..++......+...+||.+||+.||.+|||+.++++
T Consensus 192 el~t~~~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~ 252 (262)
T d1byga_ 192 EIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 252 (262)
T ss_dssp HHHTTSCCSCTTS-CGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHCCCCCCCCC-CHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 9997 34433 333555566665555544444455569999999999999999999976
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.4e-36 Score=322.00 Aligned_cols=208 Identities=14% Similarity=0.216 Sum_probs=156.1
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. ||||+++++ ++..... ..+++|||| .+++|..+. +.+++.+++.+++||+.||+|||++
T Consensus 75 ~~~~Ei~il~~l~~hpnIv~~~~-~~~~~~~-~~~~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~~ 148 (328)
T d3bqca1 75 KIKREIKILENLRGGPNIITLAD-IVKDPVS-RTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSM 148 (328)
T ss_dssp HHHHHHHHHHHHTTSTTBCCEEE-EEECTTT-CSEEEEEECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCCCCcEEEE-EEEecCC-CceeEEEeecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 4447888999985 999999999 5544332 368999999 888887654 3499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||||||+|||++.++ .+||+|||+|.......
T Consensus 149 gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~-------------------------------------------- 184 (328)
T d3bqca1 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-------------------------------------------- 184 (328)
T ss_dssp TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC--------------------------------------------
T ss_pred ccccccccccceEEcCCCCeeeecccccceeccCCC--------------------------------------------
Confidence 999999999999998655 58999888874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
.....+||+.|+|||.+.+.. ++.++||||||
T Consensus 185 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 217 (328)
T d3bqca1 185 -----------------------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG 217 (328)
T ss_dssp -----------------------------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHH
T ss_pred -----------------------------------------------cccccccCccccCcccccCCCCCCcccchhhhh
Confidence 001146899999999988765 79999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc---------------CCC--------------------Cc-cccccCchHHH
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH---------------RVL--------------------PP-QLLLKFPKEAS 339 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~---------------~~~--------------------p~-~~~~~~p~~~~ 339 (720)
|++|||++ ||............+.. ... +. ......++..+
T Consensus 218 ~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d 297 (328)
T d3bqca1 218 CMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD 297 (328)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHH
T ss_pred hhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHH
Confidence 99999999 67654332211111100 000 00 01112244569
Q ss_pred HHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 340 FCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||.+||++||.+|||++|+|+||||+..
T Consensus 298 li~~mL~~dP~~R~ta~e~L~Hp~F~~v 325 (328)
T d3bqca1 298 FLDKLLRYDHQSRLTAREAMEHPYFYTV 325 (328)
T ss_dssp HHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred HHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 9999999999999999999999999875
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-36 Score=320.45 Aligned_cols=205 Identities=20% Similarity=0.232 Sum_probs=155.2
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHHH
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFR 128 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~~ 128 (720)
+|..++.+ .+|||||.+++.++..+. .++++||| .+|+|.++|... ...+++.+++.|+.
T Consensus 65 ~e~~~l~~~~~h~~iv~~~~~~~~~~~---~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 141 (299)
T d1ywna1 65 SELKILIHIGHHLNVVNLLGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 141 (299)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEECSTTS---CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHH
T ss_pred HHHHHHHhhcCCCeEEEeeeeeccCCC---eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHH
Confidence 55555655 478999999994444332 46999999 999999999432 23489999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++|||||||||+||||+.++++||+|||+++......
T Consensus 142 qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~--------------------------------- 188 (299)
T d1ywna1 142 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--------------------------------- 188 (299)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCT---------------------------------
T ss_pred HHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccc---------------------------------
Confidence 99999999999999999999999999999999999998885432110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
+. .......||+.|+|||++.+..+
T Consensus 189 ~~-------------------------------------------------------~~~~~~~gt~~y~APE~l~~~~~ 213 (299)
T d1ywna1 189 DY-------------------------------------------------------VRKGDARLPLKWMAPETIFDRVY 213 (299)
T ss_dssp TS-------------------------------------------------------CCTTSCCCGGGGCCHHHHHHCCC
T ss_pred cc-------------------------------------------------------cccCceeeCccccchhHhhcCCC
Confidence 00 00011478999999999999999
Q ss_pred Cccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+.++|||||||++|||++ ||............+..+..++......+...+||.+||+.||.+|||+.||++|
T Consensus 214 ~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 214 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999999997 5666555545555666655544333344556699999999999999999999975
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-36 Score=327.85 Aligned_cols=233 Identities=18% Similarity=0.194 Sum_probs=164.5
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCC
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVD 119 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~ 119 (720)
.+.++++++.... ......-|..+|..+|++++|||||++++++...+ ....++|+||||.+++|.+.+. ..++
T Consensus 42 ~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~---~~~~ 117 (355)
T d2b1pa1 42 DRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 117 (355)
T ss_dssp TEEEEEEEEESTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT---SCCC
T ss_pred CCEEEEEEEChhh-cCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhhh---cCCC
Confidence 3444544443222 22333345668999999999999999999433222 1335789999996667777663 3489
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhh
Q 004989 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
+.+++.+++||+.||.|||++||+||||||+|||++.++.++++|||.++......
T Consensus 118 ~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~------------------------ 173 (355)
T d2b1pa1 118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF------------------------ 173 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccccc------------------------
Confidence 99999999999999999999999999999999999999999999888763321110
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004989 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
.....+||+.|+|
T Consensus 174 -------------------------------------------------------------------~~~~~~~t~~y~a 186 (355)
T d2b1pa1 174 -------------------------------------------------------------------MMTPYVVTRYYRA 186 (355)
T ss_dssp --------------------------------------------------------------------------CCTTCC
T ss_pred -------------------------------------------------------------------ccccccccccccC
Confidence 0112468999999
Q ss_pred cccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhc-CCCCc---------------------------
Q 004989 280 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP--------------------------- 328 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~--------------------------- 328 (720)
||++.+..+++++||||+||++|||++ ||.+..........+.. ...++
T Consensus 187 PE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (355)
T d2b1pa1 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 266 (355)
T ss_dssp HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHH
T ss_pred hhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccc
Confidence 999999999999999999999999999 66554433222111110 00000
Q ss_pred ----cc--------cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 329 ----QL--------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 329 ----~~--------~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.. ....++..+||.+||++||++||||+|+|+||||+...+
T Consensus 267 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~ 319 (355)
T d2b1pa1 267 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 319 (355)
T ss_dssp HSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred ccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCCC
Confidence 00 001123458999999999999999999999999998644
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-36 Score=318.64 Aligned_cols=211 Identities=15% Similarity=0.104 Sum_probs=163.1
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
-+..+|..+|++++|||||++++.++..+. .+++|||| .+++|.+++......+++..++.++.||+.||.|||+.
T Consensus 73 ~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~---~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~ 149 (311)
T d1r0pa_ 73 SQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 149 (311)
T ss_dssp HHHHHHHHHHHTCCCTTBCCCCEEEEETTT---EEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCEeEEeEEEEecCC---ceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc
Confidence 345578889999999999999994444332 57999999 99999999977777789999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||||+.++.+||+|||+++........
T Consensus 150 ~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~------------------------------------------- 186 (311)
T d1r0pa_ 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD------------------------------------------- 186 (311)
T ss_dssp TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC-------------------------------------------
T ss_pred CcccCCccHHhEeECCCCCEEEecccchhhccccccc-------------------------------------------
Confidence 9999999999999999999999999988543211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.........||+.|+|||.+.+..++.++|||||||+
T Consensus 187 -------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGiv 223 (311)
T d1r0pa_ 187 -------------------------------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 223 (311)
T ss_dssp -------------------------------------------CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred -------------------------------------------cceecccccccccccChHHHhcCCCCChhHhhhhHHH
Confidence 0000011468999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|||++ ||............+..+..++......+...+|+.+||+.||++||++.||++|
T Consensus 224 l~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 224 LWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999998 6655444434444455444443322333455699999999999999999999975
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-35 Score=311.95 Aligned_cols=204 Identities=16% Similarity=0.161 Sum_probs=161.0
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHH
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i 126 (720)
..+|...+.++ +|||||++++ ++.++. .+++|||| .+|+|.++|.... ..+++.+++.+
T Consensus 65 ~~~e~~~l~~~~~HpnIv~~~~-~~~~~~---~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 140 (299)
T d1fgka_ 65 LISEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 140 (299)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEeccc-ccccCC---eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHH
Confidence 33677777776 8999999999 555543 57999999 9999999995432 34899999999
Q ss_pred HHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccc
Q 004989 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||++|||||||||+|||++.++.+||+|||++.........
T Consensus 141 ~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~----------------------------- 191 (299)
T d1fgka_ 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----------------------------- 191 (299)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTT-----------------------------
T ss_pred HHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccc-----------------------------
Confidence 999999999999999999999999999999999999999887442111000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC
Q 004989 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
.......||+.|+|||.+.+.
T Consensus 192 -----------------------------------------------------------~~~~~~~~~~~y~aPE~l~~~ 212 (299)
T d1fgka_ 192 -----------------------------------------------------------KKTTNGRLPVKWMAPEALFDR 212 (299)
T ss_dssp -----------------------------------------------------------CCCTTSCCGGGGSCHHHHHHC
T ss_pred -----------------------------------------------------------cccccCCCChhhhhhhHhcCC
Confidence 000114689999999999999
Q ss_pred CCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.|+.++|||||||++|||++ ||.... .......+..+..++......+...+||.+||++||++|||+.||++
T Consensus 213 ~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~-~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 213 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCchhhhHHhHHHHHHhccCCCCCCCCCC-HHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 99999999999999999997 454433 33555666665444443333455569999999999999999999986
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-36 Score=318.12 Aligned_cols=210 Identities=19% Similarity=0.228 Sum_probs=161.4
Q ss_pred hchhhhhhcccCCC-CCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~H-pnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|+.+|++++| |||+++++ ++++.. .++++||| .|++|.+++...+ .+++..++.++.||+.||.|||++
T Consensus 74 ~~~~E~~il~~l~h~pnIv~~~~-~~~~~~---~~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH~~ 148 (322)
T d1vzoa_ 74 HTRTERQVLEHIRQSPFLVTLHY-AFQTET---KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL 148 (322)
T ss_dssp GCCCHHHHHHHHHTCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCCeEEEeee-eeccCC---ceeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhhcC
Confidence 34478889999977 89999999 565554 57999999 9999999995544 489999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.++.+||+|||++..+......
T Consensus 149 ~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~------------------------------------------- 185 (322)
T d1vzoa_ 149 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE------------------------------------------- 185 (322)
T ss_dssp TCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGG-------------------------------------------
T ss_pred CEEeccCCccceeecCCCCEEEeeccchhhhcccccc-------------------------------------------
Confidence 9999999999999999999999999887432111000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchhhh
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLG 298 (720)
......|++.|+|||++.+.. ++.++||||||
T Consensus 186 ----------------------------------------------~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG 219 (322)
T d1vzoa_ 186 ----------------------------------------------RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 219 (322)
T ss_dssp ----------------------------------------------GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHH
T ss_pred ----------------------------------------------cccccccccccchhHHhhcCCcCCCchhhhHHHH
Confidence 001146899999999997654 68899999999
Q ss_pred chhhhccc---cCCCCch---HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~---~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|+||||++ ||..... ........... .++......+...+||.+||++||.+|| |++|+|+||||++.
T Consensus 220 ~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i 298 (322)
T d1vzoa_ 220 VLMYELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298 (322)
T ss_dssp HHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcccC-CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence 99999999 7765422 22222222111 2222223345556999999999999999 58999999999875
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.3e-35 Score=308.50 Aligned_cols=205 Identities=15% Similarity=0.121 Sum_probs=162.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-----------------------CCCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSV 118 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-----------------------~~~l 118 (720)
+..+|..+|++++||||+++++ ++.... .++++||| .+++|.++|... ...+
T Consensus 62 ~~~~E~~il~~l~h~niv~~~~-~~~~~~---~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 137 (301)
T d1lufa_ 62 DFQREAALMAEFDNPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 137 (301)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred HHHHHHHHHHhcCCCCccccee-eeccCC---ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCC
Confidence 4458888999999999999999 555443 56999999 899999999432 1248
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.|+.||+.||.|||++|||||||||+|||++.++.+||+|||+++......
T Consensus 138 ~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~----------------------- 194 (301)
T d1lufa_ 138 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD----------------------- 194 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGG-----------------------
T ss_pred CHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCc-----------------------
Confidence 899999999999999999999999999999999999999999999998873211000
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.. .......||+.|+
T Consensus 195 ----------~~-------------------------------------------------------~~~~~~~~~~~y~ 209 (301)
T d1lufa_ 195 ----------YY-------------------------------------------------------KADGNDAIPIRWM 209 (301)
T ss_dssp ----------CB-------------------------------------------------------C----CCBCGGGC
T ss_pred ----------cc-------------------------------------------------------cccCCCCcCcCcC
Confidence 00 0001146789999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||.+.+..|+.++|||||||++|||++ ||.... ..+....+..+..++......+...+||.+||+.||++|||
T Consensus 210 aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~-~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt 288 (301)
T d1lufa_ 210 PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA-HEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPS 288 (301)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCC-HHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcC
Confidence 9999999999999999999999999998 454443 34556667766655544444455669999999999999999
Q ss_pred hHHHHc
Q 004989 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.||++
T Consensus 289 ~~ev~~ 294 (301)
T d1lufa_ 289 FCSIHR 294 (301)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999975
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-35 Score=310.85 Aligned_cols=212 Identities=11% Similarity=0.097 Sum_probs=156.4
Q ss_pred hhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+..++|...+.+++|||||++++.+.........+|+|||| .+++|.++|++. .+++..++.++.|++.||.|||+
T Consensus 41 ~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~ 118 (303)
T d1vjya_ 41 SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHM 118 (303)
T ss_dssp HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 344557777888899999999999655555555578999999 899999999654 38999999999999999999996
Q ss_pred --------CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 140 --------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 140 --------~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
+|||||||||+||||+.++.+||+|||+++........
T Consensus 119 ~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~---------------------------------- 164 (303)
T d1vjya_ 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT---------------------------------- 164 (303)
T ss_dssp CBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE----------------------------------
T ss_pred hhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcc----------------------------------
Confidence 59999999999999999999999999987432111000
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---- 287 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---- 287 (720)
........+||+.|+|||++.+..
T Consensus 165 ----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 192 (303)
T d1vjya_ 165 ----------------------------------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKH 192 (303)
T ss_dssp ----------------------------------------------------ECC----CCSCGGGCCHHHHTTCSCTTC
T ss_pred ----------------------------------------------------eeccccceecccCcCChhhccccccccC
Confidence 000011257999999999987653
Q ss_pred --CCccccchhhhchhhhccc---cCCCC--------------chHHHHHHHhhcCCCCccccccC------chHHHHHH
Q 004989 288 --VSCASDIYRLGVLLFELFC---PFSTG--------------EEKTRTMSSLRHRVLPPQLLLKF------PKEASFCL 342 (720)
Q Consensus 288 --~s~~sDIwSLGvll~eLlt---pf~~~--------------~~~~~~~~~l~~~~~p~~~~~~~------p~~~~Li~ 342 (720)
++.++|||||||+||||+| ||... .........+....+.|.++..+ ....+|+.
T Consensus 193 ~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~ 272 (303)
T d1vjya_ 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 272 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHH
T ss_pred CCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHH
Confidence 6779999999999999998 22110 11122222333333333332222 12458999
Q ss_pred HcCCCCCCCCCChHHHHc
Q 004989 343 WLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~ 360 (720)
+||+.||++|||+.||++
T Consensus 273 ~cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 273 ECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTCCSSGGGSCCHHHHHH
T ss_pred HHcccCHhHCcCHHHHHH
Confidence 999999999999999986
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-35 Score=308.56 Aligned_cols=205 Identities=15% Similarity=0.189 Sum_probs=159.8
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------CCCCHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------RSVDVYEC 123 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------------~~l~~~~~ 123 (720)
+..+|..+++++ +|||||++++ ++.+.. .+|++||| .+++|.++|.... ..+++..+
T Consensus 72 ~~~~E~~~~~~l~~HpnIv~~~g-~~~~~~---~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 147 (311)
T d1t46a_ 72 ALMSELKVLSYLGNHMNIVNLLG-ACTIGG---PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147 (311)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred HHHHHHHHHHhccCCCCEEEEEE-EEeeCC---EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHH
Confidence 444778888887 6999999999 555543 46999999 8999999994322 25899999
Q ss_pred HHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhh
Q 004989 124 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 203 (720)
Q Consensus 124 ~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (720)
+.|+.||+.||.|||++|||||||||+||+++.++.++++|||.++......
T Consensus 148 ~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~---------------------------- 199 (311)
T d1t46a_ 148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS---------------------------- 199 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCT----------------------------
T ss_pred HHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCC----------------------------
Confidence 9999999999999999999999999999999999999999998885432110
Q ss_pred cccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc
Q 004989 204 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 283 (720)
Q Consensus 204 ~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 283 (720)
.+ .......||+.|+|||++
T Consensus 200 -----~~-------------------------------------------------------~~~~~~~gt~~y~aPE~~ 219 (311)
T d1t46a_ 200 -----NY-------------------------------------------------------VVKGNARLPVKWMAPESI 219 (311)
T ss_dssp -----TS-------------------------------------------------------EECSSSEECGGGCCHHHH
T ss_pred -----cc-------------------------------------------------------eEeeecccChHHcCHHHh
Confidence 00 000114789999999999
Q ss_pred cCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHH
Q 004989 284 AGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGEL 358 (720)
Q Consensus 284 ~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~ei 358 (720)
.+..++.++|||||||++|||+| ||............+..+..+. .+..+| ...+||.+||++||.+|||+.+|
T Consensus 220 ~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~Li~~cl~~dP~~RPs~~~i 298 (311)
T d1t46a_ 220 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML-SPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298 (311)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-CcccccHHHHHHHHHHcCCChhHCcCHHHH
Confidence 98889999999999999999998 3444444334444444443333 333344 44599999999999999999999
Q ss_pred Hc
Q 004989 359 LQ 360 (720)
Q Consensus 359 L~ 360 (720)
++
T Consensus 299 l~ 300 (311)
T d1t46a_ 299 VQ 300 (311)
T ss_dssp HH
T ss_pred HH
Confidence 86
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-34 Score=306.61 Aligned_cols=242 Identities=13% Similarity=0.069 Sum_probs=177.2
Q ss_pred ccccCCcccccccccCCC------------CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCC
Q 004989 24 QDSDSSRALNISGVSDRN------------PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA 91 (720)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~------------~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~ 91 (720)
+.....+.+|.|+++... ...++++++. .........+..+|..++++++|||||++++ ++..+.
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~--~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~-~~~~~~ 96 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRLLG-VVSQGQ 96 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECC--TTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE-EECSSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEEC--cccChHHHHHHHHHHHHHHHcCCCCEeeeee-EEecCC
Confidence 344445666666666521 1233444432 2222333334458888999999999999999 554443
Q ss_pred CCCcEEEEEec-CCCCHHHHHhC---------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceE
Q 004989 92 AIDPFVHAIEW-GDVSLRQWLDK---------PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVS 161 (720)
Q Consensus 92 ~~~~~~lv~E~-~ggsL~~~L~~---------~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vk 161 (720)
.+++|||| .+|+|.+++.. ....++...+..|+.||+.||.|||+++|+||||||+|||++.++++|
T Consensus 97 ---~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~K 173 (308)
T d1p4oa_ 97 ---PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 173 (308)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEE
T ss_pred ---ceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEE
Confidence 46999999 99999999832 123478999999999999999999999999999999999999999999
Q ss_pred EeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccc
Q 004989 162 FIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEG 241 (720)
Q Consensus 162 liDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~ 241 (720)
|+|||+++.......
T Consensus 174 l~DFGla~~~~~~~~----------------------------------------------------------------- 188 (308)
T d1p4oa_ 174 IGDFGMTRDIYETDY----------------------------------------------------------------- 188 (308)
T ss_dssp ECCTTCCCGGGGGGC-----------------------------------------------------------------
T ss_pred EeecccceeccCCcc-----------------------------------------------------------------
Confidence 999988743211000
Q ss_pred cccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHH
Q 004989 242 MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRT 317 (720)
Q Consensus 242 ~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~ 317 (720)
........||+.|+|||.+.+..++.++|||||||++|||++ ||..... ...
T Consensus 189 -----------------------~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~-~~~ 244 (308)
T d1p4oa_ 189 -----------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-EQV 244 (308)
T ss_dssp -----------------------EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-HHH
T ss_pred -----------------------eeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCH-HHH
Confidence 000111468999999999999999999999999999999998 4544433 355
Q ss_pred HHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 318 MSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 318 ~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
...+..+..++......+...+||.+||+.||.+|||+.+|++
T Consensus 245 ~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 287 (308)
T d1p4oa_ 245 LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 287 (308)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 5555555544433333345669999999999999999999997
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.98 E-value=2.6e-33 Score=294.39 Aligned_cols=214 Identities=17% Similarity=0.142 Sum_probs=154.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..+++.++|+|+|.++..+..... .+++||||.+++|.+.+......+++..+..++.||+.||+|||++||||
T Consensus 50 ~~E~~i~~~l~~~~~i~~~~~~~~~~~---~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH 126 (299)
T d1ckia_ 50 HIESKIYKMMQGGVGIPTIRWCGAEGD---YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 126 (299)
T ss_dssp HHHHHHHHHSTTSTTCCCEEEEEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHccCCCcccEEEEEEecCC---EEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 467778999999888777764444443 57999999888998888666667999999999999999999999999999
Q ss_pred ccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 145 HNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 145 rDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|||||+|||++. +..++++|||+++..........
T Consensus 127 rDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~------------------------------------------ 164 (299)
T d1ckia_ 127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------------------ 164 (299)
T ss_dssp SCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCB------------------------------------------
T ss_pred ccCCHhhccccccCCCceeeeeccCcceeccccccccc------------------------------------------
Confidence 999999999863 45699999998854322100000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.........+||+.|+|||++.+..++.++|||||||++
T Consensus 165 -----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l 203 (299)
T d1ckia_ 165 -----------------------------------------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL 203 (299)
T ss_dssp -----------------------------------------CCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------eeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHH
Confidence 000001225799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHH--Hhhc---CCCCccccccCchH-HHHHHHcCCCCCCCCCChHHH---HcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMS--SLRH---RVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGEL---LQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~--~l~~---~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~ei---L~hp~~ 364 (720)
|||++ ||........... .... ...++.+...+|++ .+|+.+||..+|.+||++.++ |+|+|.
T Consensus 204 ~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 204 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp HHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence 99999 7765432211111 1111 11223334455554 599999999999999998755 455543
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.97 E-value=1.8e-31 Score=279.53 Aligned_cols=206 Identities=15% Similarity=0.110 Sum_probs=150.6
Q ss_pred hhhhcccCCC-CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 67 DGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 67 e~~~L~~l~H-pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
|..++..+.| +||+.+++ ++..+ ...|+||||.|++|.+++...+..+++.++..++.|++.||.|||++|||||
T Consensus 50 e~~~~~~l~~~~~i~~~~~-~~~~~---~~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHr 125 (293)
T d1csna_ 50 EYRTYKLLAGCTGIPNVYY-FGQEG---LHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYR 125 (293)
T ss_dssp HHHHHHHTTTCTTCCCEEE-EEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred HHHHHHHhcCCCCCCEEEE-EeecC---CccEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceec
Confidence 3445556555 89999888 44443 2679999999999999997766779999999999999999999999999999
Q ss_pred cCCCCcEEEcc-----CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 146 NVRPSCFVMSS-----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 146 DLKP~NILl~~-----~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||+|||++. .+.+||+|||+++..........
T Consensus 126 DiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~----------------------------------------- 164 (293)
T d1csna_ 126 DIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH----------------------------------------- 164 (293)
T ss_dssp CCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB-----------------------------------------
T ss_pred cCCccceeecCcccccCCceEEcccceeEEcccCccccc-----------------------------------------
Confidence 99999999974 57899999998854322100000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.........+||+.|||||++.+..++.++|||||||+
T Consensus 165 ------------------------------------------~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~ 202 (293)
T d1csna_ 165 ------------------------------------------IPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHV 202 (293)
T ss_dssp ------------------------------------------CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------eeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHH
Confidence 00000112579999999999999999999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhh---cCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHH
Q 004989 301 LFELFC---PFSTGEE--KTRTMSSLR---HRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~---~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
+|||++ ||..... .......+. ....++.+....|+ ..+|+..|+..+|++||+...+.
T Consensus 203 l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~ 270 (293)
T d1csna_ 203 FMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ 270 (293)
T ss_dssp HHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred HHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 999999 6654321 112222221 12222333344554 45999999999999999876654
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=4.8e-31 Score=284.03 Aligned_cols=196 Identities=19% Similarity=0.273 Sum_probs=135.9
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec--CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCC
Q 004989 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPS 150 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~--~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~ 150 (720)
.|||||++++.+...... ..+++|++ .+++..... ......+++..++.++.||+.||+|||+ +||+||||||+
T Consensus 78 ~~~~iv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~ 155 (362)
T d1q8ya_ 78 GANHILKLLDHFNHKGPN--GVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE 155 (362)
T ss_dssp HHTTBCCCCEEEEEEETT--EEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGG
T ss_pred CcCceEEEEEEeeecccc--ceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChh
Confidence 468899999944333332 33444444 444444444 4455568999999999999999999998 89999999999
Q ss_pred cEEEccCCc------eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 151 CFVMSSFNH------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 151 NILl~~~~~------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||+.++. ++++|||.+......
T Consensus 156 NIll~~~~~~~~~~~~kl~dfg~s~~~~~~-------------------------------------------------- 185 (362)
T d1q8ya_ 156 NVLMEIVDSPENLIQIKIADLGNACWYDEH-------------------------------------------------- 185 (362)
T ss_dssp GEEEEEEETTTTEEEEEECCCTTCEETTBC--------------------------------------------------
T ss_pred HeeeeccCcccccceeeEeecccccccccc--------------------------------------------------
Confidence 999986553 777777665211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
....+||+.|+|||++.+..|+.++|||||||++++|
T Consensus 186 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 222 (362)
T d1q8ya_ 186 -------------------------------------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL 222 (362)
T ss_dssp -------------------------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccccccChhhccccCCCccccccchHHHHHHH
Confidence 0114789999999999999999999999999999999
Q ss_pred cc---cCCCCchH---------HHHHHHhhcCCCCcc--------------------------------------c-ccc
Q 004989 305 FC---PFSTGEEK---------TRTMSSLRHRVLPPQ--------------------------------------L-LLK 333 (720)
Q Consensus 305 lt---pf~~~~~~---------~~~~~~l~~~~~p~~--------------------------------------~-~~~ 333 (720)
++ ||.+.... ...+..+. ..|.. + ...
T Consensus 223 ~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (362)
T d1q8ya_ 223 ITGDFLFEPDEGHSYTKDDDHIAQIIELLG--ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 300 (362)
T ss_dssp HHSSCCC---------CHHHHHHHHHHHHC--SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHH
T ss_pred HHCCCCCCCCccccccchhHHHHHHHHHhC--CCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCccc
Confidence 99 55443211 01111110 00000 0 011
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 334 ~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+...+||.+||++||.+||||+|+|+||||++.
T Consensus 301 ~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~ 334 (362)
T d1q8ya_ 301 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 334 (362)
T ss_dssp HHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence 2334599999999999999999999999999965
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.62 E-value=7.9e-16 Score=164.98 Aligned_cols=139 Identities=20% Similarity=0.244 Sum_probs=106.3
Q ss_pred hhhhhhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCCCEEEEeeCCCc---EEEeeCCcccccc-----cccccce
Q 004989 580 LEGLCKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKK---IKVFECDAIINEN-----RDIHYPV 650 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~---i~iwd~~~~~~~~-----~~~~~~~ 650 (720)
.++..++|...+.+.+..+. ...+.+|...|.+|+|+|||++|||||.|++ |+|||+.++.... .....+.
T Consensus 203 ~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~ 282 (393)
T d1sq9a_ 203 NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQAS 282 (393)
T ss_dssp TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-------
T ss_pred CCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccce
Confidence 44567888888888888888 6678999999999999999999999999985 9999998752110 0000011
Q ss_pred E-EecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEEE-----------EEeecCCceEEEecCccceEEc
Q 004989 651 V-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSALY-----------CIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 651 ~-~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~v~-----------~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
. ...|.+.|++|+|+|+ +++|||||.|++|+|||+.+|+++.++. .++|++.+..+++++...++.+
T Consensus 283 ~~~~gH~~~V~~l~fspd-~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (393)
T d1sq9a_ 283 LGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 361 (393)
T ss_dssp -CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEE
T ss_pred eeeecccCceeeeccCCC-CCeeEEECCCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcccceEEEC
Confidence 1 1246778999999995 5699999999999999999999998853 5789999888888877777765
Q ss_pred c
Q 004989 719 Q 719 (720)
Q Consensus 719 ~ 719 (720)
.
T Consensus 362 ~ 362 (393)
T d1sq9a_ 362 K 362 (393)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.49 E-value=2.3e-15 Score=145.79 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=71.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|...|.++.|++++..++ + .. .+++||| .+..+.+ ++...+..++.||+.+|.|||++||+|
T Consensus 63 ~e~~~l~~l~~~~v~~~~~-~-~~------~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~~giiH 126 (191)
T d1zara2 63 NEFRALQKLQGLAVPKVYA-W-EG------NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYHRGIVH 126 (191)
T ss_dssp HHHHHHHHTTTSSSCCEEE-E-ET------TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHccCCCcceEEE-e-cC------CEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHhhCCEEE
Confidence 5677888999999998877 2 22 2799999 5544332 455567789999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCC
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
|||||+|||+++ +.++|+|||.+...
T Consensus 127 rDiKP~NILv~~-~~~~liDFG~a~~~ 152 (191)
T d1zara2 127 GDLSQYNVLVSE-EGIWIIDFPQSVEV 152 (191)
T ss_dssp SCCSTTSEEEET-TEEEECCCTTCEET
T ss_pred ccCChhheeeeC-CCEEEEECCCcccC
Confidence 999999999985 45899999988544
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.49 E-value=1.4e-13 Score=141.24 Aligned_cols=124 Identities=10% Similarity=0.110 Sum_probs=101.1
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASR 656 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~ 656 (720)
.++..+++...+.+++.++. +|.+.|.+|+|+|+|++||+|+.|++|++||+.... ++... .+.
T Consensus 204 ~d~~v~i~d~~~~~~~~~~~-----~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~--------~~~~~~~~~~~ 270 (340)
T d1tbga_ 204 CDASAKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ--------ELMTYSHDNII 270 (340)
T ss_dssp TTTEEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCC
T ss_pred cCceEEEEECCCCcEEEEEe-----CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccc--------ccccccccccc
Confidence 34445566666667766664 468899999999999999999999999999987652 22221 235
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
..|.+++|+|+ +.+|++|+.||+|+|||+.+++++.+ |+|++|+|.+.++++|+.|...+
T Consensus 271 ~~i~~~~~s~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~ 337 (340)
T d1tbga_ 271 CGITSVSFSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp SCEEEEEECSS-SCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred CceEEEEECCC-CCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEE
Confidence 56999999995 56999999999999999999999987 89999999999999999986544
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=3.6e-13 Score=140.41 Aligned_cols=112 Identities=12% Similarity=0.095 Sum_probs=88.5
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE---EecCCCCEEEEEEecC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV---EMASRSKLSSICWNSY 667 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~i~~l~w~~~ 667 (720)
+.+.+.+|.| ++.|.||+|+|||++||||| |++|+|||+.+.... .++. ...|.+.|++|+|+|+
T Consensus 41 ~~~~~~~~~H------~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~-----~~~~~~~~~~h~~~I~~v~~s~d 108 (337)
T d1gxra_ 41 HARQINTLNH------GEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK-----SPVSQLDCLNRDNYIRSCKLLPD 108 (337)
T ss_dssp EEEEEEEECC------SSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC-----SCSEEEECSCTTSBEEEEEECTT
T ss_pred CceEEEECCC------CCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCccc-----ceeEEeeecCCCCcEEEEEEcCC
Confidence 4566777754 88999999999999999998 899999998765221 1222 2245677999999995
Q ss_pred CCCEEEEEeCCCcEEEEECCCC--cEEEE-------EEEEeecCCceEEEecCccce
Q 004989 668 IKSQIASSNFEGVVQVGQVLHL--IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 668 ~~~~laS~s~D~~v~lWD~~tg--~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+++||+|+.||+|+|||+... +...+ +.+++|++.+..+++++.|..
T Consensus 109 -g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 164 (337)
T d1gxra_ 109 -GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 164 (337)
T ss_dssp -SSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSC
T ss_pred -CCEEEEeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999998754 34443 789999999999999887753
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.43 E-value=4.5e-13 Score=141.07 Aligned_cols=109 Identities=16% Similarity=0.207 Sum_probs=84.9
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc-ccc----------cceEEecCCCCEEEEEEecCCCCEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR-DIH----------YPVVEMASRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~-~~~----------~~~~~~~~~~~i~~l~w~~~~~~~la 673 (720)
+|++.|+||+|+|||++||||+ |++|+|||+.++..... ..+ .......+...|.+|+|+|+ +++||
T Consensus 60 ~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~-~~~l~ 137 (388)
T d1erja_ 60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD-GKFLA 137 (388)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT-SSEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCC-CCcce
Confidence 4699999999999999999987 99999999876411000 000 00111234667999999995 57999
Q ss_pred EEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 674 SSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 674 S~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+.||+|++||..+++.+.. |++++|++.+..+..|+.+..
T Consensus 138 s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 186 (388)
T d1erja_ 138 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 186 (388)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 999999999999999998876 899999999998888877654
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.42 E-value=8.7e-13 Score=132.69 Aligned_cols=115 Identities=14% Similarity=0.053 Sum_probs=87.8
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc-cccc-cce-----------------------------
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-RDIH-YPV----------------------------- 650 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-~~~~-~~~----------------------------- 650 (720)
.|.||.+.|++|+|+|+|++|||||.|++|+|||+.++.... ...| .++
T Consensus 12 ~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (317)
T d1vyhc1 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 91 (317)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred EEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccccc
Confidence 367889999999999999999999999999999987631000 0000 000
Q ss_pred ---E-EecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 651 ---V-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 651 ---~-~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
. ...+...+.++.|+|+ ++.|++++.|+++++||+.+++.+.+ +.+++|++.+..+++|+.|...+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~ 168 (317)
T d1vyhc1 92 ECIRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168 (317)
T ss_dssp CEEECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ccccccccccccceeeeccCC-CceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEE
Confidence 0 0123455778888884 56899999999999999999998876 78999999999999988876543
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.41 E-value=4.3e-13 Score=143.20 Aligned_cols=111 Identities=10% Similarity=0.069 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCc-
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGV- 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~~~~laS~s~D~~- 680 (720)
...+...|.||+|+||| +||||+.|++|+|||+.+..... .. .+... ..|...|.+|+|+|+ +.+||||+.|++
T Consensus 180 ~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~-~~-~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~D~t~ 255 (393)
T d1sq9a_ 180 PMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLY-NF-ESQHSMINNSNSIRSVKFSPQ-GSLLAIAHDSNSF 255 (393)
T ss_dssp SSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEE-EE-ECCC---CCCCCEEEEEECSS-TTEEEEEEEETTE
T ss_pred ccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeeccccccc-cc-ccccccccccceEEEcccccc-cceeeeecCCCCc
Confidence 44567789999999998 99999999999999998752110 00 01112 245778999999995 569999999985
Q ss_pred --EEEEECCCCcEEEE--------------------EEEEeecCCceEEEecCccceEE
Q 004989 681 --VQVGQVLHLIYFSA--------------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 681 --v~lWD~~tg~~~~~--------------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+|||+.+|+++.+ |++++|+|.+.++++|+.|.-..
T Consensus 256 ~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~ 314 (393)
T d1sq9a_ 256 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 314 (393)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred ceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEE
Confidence 99999999988875 79999999999999999986543
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.40 E-value=4.2e-13 Score=136.35 Aligned_cols=108 Identities=9% Similarity=0.066 Sum_probs=82.7
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.+|.+.|++|+|+|||++|||||.|++|||||+...... ........|...|.||+|+|+++.+|+||+.||+|++
T Consensus 8 ~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~----~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~ 83 (342)
T d1yfqa_ 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcc----eEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceee
Confidence 457999999999999999999999999999998654110 1122344578889999999987789999999999999
Q ss_pred EECCCCcEEEE--------EEEEeecCCceEEEecCccce
Q 004989 684 GQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 684 WD~~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+.++..... .....+.+....+.+++.|..
T Consensus 84 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (342)
T d1yfqa_ 84 VDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSE
T ss_pred eecccccccccccccccccccccccccccccccccccccc
Confidence 99998877765 234445555555555555543
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=1.4e-12 Score=135.91 Aligned_cols=118 Identities=9% Similarity=-0.010 Sum_probs=98.0
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEE
Q 004989 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 663 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 663 (720)
.+++...+.+.+..+.+ ...|.+++|+|++++||+|+.|+.|++||+.+.. ......+...|.+|+
T Consensus 207 v~i~d~~~~~~~~~~~~------~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~--------~~~~~~~~~~i~~v~ 272 (337)
T d1gxra_ 207 VRSWDLREGRQLQQHDF------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--------KYQLHLHESCVLSLK 272 (337)
T ss_dssp EEEEETTTTEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--------EEEECCCSSCEEEEE
T ss_pred ccccccccceeeccccc------ccceEEEEEcccccccceeccccccccccccccc--------cccccccccccceEE
Confidence 34445555566666544 7889999999999999999999999999987652 233445677899999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccceE
Q 004989 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 664 w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|+ +++|||++.||+|+|||+.+++.+.+ |++++|++.+.++++|+.|...
T Consensus 273 ~s~~-g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I 330 (337)
T d1gxra_ 273 FAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp ECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred ECCC-CCEEEEEeCCCeEEEEECCCCCEEEEccCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 9995 46999999999999999999999876 8999999999999999988643
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.38 E-value=2.3e-12 Score=133.53 Aligned_cols=108 Identities=11% Similarity=0.100 Sum_probs=91.6
Q ss_pred CCCCCCCCCeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
..+.+|.+.|.+|+|+|+|++ ||||+.|++|+|||+++. .+...+ .+...|.+++|+|+ +++||+++.|
T Consensus 140 ~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~--------~~~~~~~~~~~~i~~v~~~p~-~~~l~~~~~d 210 (311)
T d1nr0a1 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--------KFKSTFGEHTKFVHSVRYNPD-GSLFASTGGD 210 (311)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--------EEEEEECCCSSCEEEEEECTT-SSEEEEEETT
T ss_pred ccccccccccccccccccceeeeccccccccccccccccc--------ccccccccccccccccccCcc-cccccccccc
Confidence 346678999999999999985 899999999999998875 233333 34677999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceEE
Q 004989 679 GVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
++|+|||+.+++.+.+ |++++|+|.+..+++|+.|...+
T Consensus 211 ~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~ 263 (311)
T d1nr0a1 211 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIK 263 (311)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEE
Confidence 9999999999988764 78999999999999999987544
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.38 E-value=1.6e-12 Score=134.80 Aligned_cols=125 Identities=15% Similarity=0.206 Sum_probs=90.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
++..+++...+.+.+..++ +|...|++++|+|||++||+|+.|+.|+|||..+......-.........|...|+
T Consensus 168 d~~i~i~d~~~~~~~~~~~-----~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~ 242 (311)
T d1nr0a1 168 DNTVAIFEGPPFKFKSTFG-----EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 242 (311)
T ss_dssp TSCEEEEETTTBEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred ccccccccccccccccccc-----cccccccccccCcccccccccccccccccccccccccccccccccccccccccccc
Confidence 3455666666677766664 35889999999999999999999999999998765211100000111234567899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCcc
Q 004989 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 661 ~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~ 713 (720)
+|+|+|+ +++||||+.||+|+|||+++++++++ +.++.|++.. +.+++.|
T Consensus 243 ~~~~s~~-~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~--l~s~s~d 302 (311)
T d1nr0a1 243 GLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA--LVSISAN 302 (311)
T ss_dssp EEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC--EEEEETT
T ss_pred ccccCCC-CCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCE--EEEEECC
Confidence 9999996 46999999999999999999999887 3466666654 4444444
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.38 E-value=8.1e-13 Score=139.89 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=84.3
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
-..|.|++|+|||++||+|+.|+.|+|||.++... ..+..+ .|.+.|.+|+|+|+ +++||||+.|++|+|||
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~------~~~~~l~gH~~~V~~l~fsp~-~~~l~s~s~D~~i~vWd 79 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW------VQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVWT 79 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE------EEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCE------EEEEEecCCCCCEEEEEECCC-CCEEEEEECCCeEEEEe
Confidence 36799999999999999999999999999765310 123344 35778999999995 56999999999999999
Q ss_pred CCCCcEEEE---------EEEEeecCCceEEEecCccce
Q 004989 686 VLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 686 ~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+.+++.... |+|++|+|.+..+..|+-|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~ 118 (371)
T d1k8kc_ 80 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV 118 (371)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS
T ss_pred ecccccccccccccccccccccccccccccceeecccCc
Confidence 988765433 899999999999998887764
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.37 E-value=1.7e-12 Score=136.47 Aligned_cols=133 Identities=13% Similarity=0.084 Sum_probs=96.8
Q ss_pred hhhhccccceEEeeeec--cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc-----cccccceEEecC
Q 004989 583 LCKYLSFSKLRVKADLN--QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-----RDIHYPVVEMAS 655 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~--~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~~ 655 (720)
..+++...+.+.+..+. ...+.+|.+.|.+++|+|+|++||+|+.|++|+|||+.+..... ....+......+
T Consensus 228 ~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (388)
T d1erja_ 228 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH 307 (388)
T ss_dssp CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECC
T ss_pred eEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccc
Confidence 34555556666666665 23466889999999999999999999999999999987642211 111112233455
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEe------ecCCceEEEecCccceE
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIV------LNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~------~~~~~~~~~~~~~~~~~ 716 (720)
...|.+++|+|+ +.+||+|+.||+|+|||+.+|+++.+ |++++ |+|.+.++++|+-|...
T Consensus 308 ~~~v~~~~~s~~-~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I 380 (388)
T d1erja_ 308 KDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA 380 (388)
T ss_dssp SSCEEEEEECGG-GCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred cceEEEEEECCC-CCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEE
Confidence 778999999996 46999999999999999999999886 66665 57788999999988643
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.37 E-value=2.5e-12 Score=131.56 Aligned_cols=37 Identities=14% Similarity=0.299 Sum_probs=34.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 639 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~ 639 (720)
|.||.+.|++|+|+|||++|||||.|++|+|||+.+.
T Consensus 51 L~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~ 87 (340)
T d1tbga_ 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTT 87 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccc
Confidence 4567999999999999999999999999999998764
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.34 E-value=2.1e-12 Score=136.68 Aligned_cols=120 Identities=9% Similarity=0.117 Sum_probs=92.0
Q ss_pred hhhccc--cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004989 584 CKYLSF--SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 584 ~~~~~~--~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
.++|.. .++..+..|+ +|.+.|.+|+|+|||++|||||.|++|+|||+.+... .+...+ .+...|.
T Consensus 31 i~iw~~~~~~~~~~~~l~-----gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~------~~~~~~~~~~~~v~ 99 (371)
T d1k8kc_ 31 VHIYEKSGNKWVQVHELK-----EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW------KPTLVILRINRAAR 99 (371)
T ss_dssp EEEEEEETTEEEEEEEEE-----CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE------EEEEECCCCSSCEE
T ss_pred EEEEECCCCCEEEEEEec-----CCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc------cccccccccccccc
Confidence 344444 3444555554 5689999999999999999999999999999865421 122222 3466799
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccce
Q 004989 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 661 ~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+++|+|+ ++.||+++.|++|++|++..+..... |+|++|+|.+..+++|+.|..
T Consensus 100 ~i~~~p~-~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~ 164 (371)
T d1k8kc_ 100 CVRWAPN-EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 164 (371)
T ss_dssp EEEECTT-SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccccccc-cccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcE
Confidence 9999996 56999999999999999876543221 899999999999999987754
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.28 E-value=4.2e-12 Score=128.82 Aligned_cols=104 Identities=11% Similarity=0.058 Sum_probs=80.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+.||.+.|.+|+|+|||++|||||.|++|+|||+.++. ++..+ .|...|++++|+|++ .+++++.|++
T Consensus 8 ~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~--------~~~~~~~~h~~~v~~v~~~~~g--~~~~~~~d~~ 77 (299)
T d1nr0a2 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI--------SNRVFPDVHATMITGIKTTSKG--DLFTVSWDDH 77 (299)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------EEECSSCSCSSCEEEEEECTTS--CEEEEETTTE
T ss_pred cCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCc--------EEEEEcCCCCCcEEEEEeeccc--eeecccceee
Confidence 46789999999999999999999999999999987752 22222 246679999999964 3667778999
Q ss_pred EEEEECCCCcE-----EEE-----EEEEeecCCceEEEecCccceE
Q 004989 681 VQVGQVLHLIY-----FSA-----LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~-----~~~-----v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++||+..... +.. +.+++|++.+..+..+..+.++
T Consensus 78 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~ 123 (299)
T d1nr0a2 78 LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA 123 (299)
T ss_dssp EEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEE
T ss_pred EEEeccCCcccccccccccccccccccccccccccccccccccccc
Confidence 99999854321 111 7788898888877777666554
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.27 E-value=1.2e-11 Score=126.36 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=82.1
Q ss_pred CCCCCCC-eEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSNL-VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~-V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
|.||.+. |+|++| ||++|||||.|++|+|||+.+. .++..+. |.+.|.+|+|+|+ ++|+||+.||+
T Consensus 8 L~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~--------~~~~~l~~H~~~V~~l~~s~~--~~l~s~s~D~~ 75 (355)
T d1nexb2 8 LRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--------KFLLQLSGHDGGVWALKYAHG--GILVSGSTDRT 75 (355)
T ss_dssp EECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTT--------EEEEEEECCSSCEEEEEEETT--TEEEEEETTCC
T ss_pred ECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCC--------cEEEEEECCCCCEEEEEEcCC--CEEEEEecccc
Confidence 4566664 577766 5889999999999999998776 3455554 5778999999983 58999999999
Q ss_pred EEEEECCCCcEEEE---------EEEEeecCCceEEEecCccceE
Q 004989 681 VQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++||+.+++++.. ...+.+++....+..|+.|...
T Consensus 76 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 120 (355)
T d1nexb2 76 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120 (355)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEE
T ss_pred cccccccccccccccccccccccccccccccccceeeeecCCCcE
Confidence 99999999988765 4667788888888888887644
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.26 E-value=1.6e-11 Score=123.19 Aligned_cols=122 Identities=11% Similarity=0.141 Sum_probs=97.0
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCC--------------------CEEEEeeCCCcEEEeeCCccccc
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG--------------------ELFAAAGVNKKIKVFECDAIINE 642 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg--------------------~~lat~~~d~~i~iwd~~~~~~~ 642 (720)
..+++...+.+.+..+. +|...|.+++|+|++ .++++|+.|++|++||..+.
T Consensus 166 ~v~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~--- 237 (317)
T d1vyhc1 166 TVRVWVVATKECKAELR-----EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG--- 237 (317)
T ss_dssp CEEEEETTTCCEEEEEC-----CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT---
T ss_pred eEEEEeeccceeeEEEe-----cCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCC---
Confidence 34455555555555554 357788888887764 47999999999999998876
Q ss_pred ccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 643 NRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 643 ~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.++..+. |...|.+++|+|+ +.+||||+.||+|+|||+.+++++.+ |++++|++.+..+++|+.|.
T Consensus 238 -----~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg 311 (317)
T d1vyhc1 238 -----MCLMTLVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ 311 (317)
T ss_dssp -----EEEEEEECCSSCEEEEEECSS-SSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTS
T ss_pred -----cEEEEEeCCCCCEEEEEECCC-CCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 3454444 4678999999995 56999999999999999999998876 89999999999999999997
Q ss_pred eEEc
Q 004989 715 VKYL 718 (720)
Q Consensus 715 ~~~~ 718 (720)
..++
T Consensus 312 ~i~i 315 (317)
T d1vyhc1 312 TVKV 315 (317)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5443
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.25 E-value=3.2e-11 Score=121.52 Aligned_cols=119 Identities=15% Similarity=0.166 Sum_probs=88.1
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEE
Q 004989 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSIC 663 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~ 663 (720)
+++.....+....+. ..|...|.+|+|+|||.+||+|+.|++|+|||+.+... .... ..|...|.+++
T Consensus 144 ~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~-------~~~~~~~h~~~v~~~~ 212 (287)
T d1pgua2 144 QVFKLSDLEVSFDLK----TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV-------KTSRWAFRTSKINAIS 212 (287)
T ss_dssp EEEETTEEEEEEECS----SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-------EECCSCCCSSCEEEEE
T ss_pred eeeeccccceeeeee----eccCCceeEEEeccCccccccccccccccceeeccccc-------ccccccccccccceee
Confidence 444444444444443 24577899999999999999999999999999876521 1111 23467799999
Q ss_pred EecCC---------CCEEEEEeCCCcEEEEECCC-CcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 664 WNSYI---------KSQIASSNFEGVVQVGQVLH-LIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 664 w~~~~---------~~~laS~s~D~~v~lWD~~t-g~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+|.. ..+||||+.|++|+|||+.+ ++.+.. |++++|++... +.+++.|-.
T Consensus 213 ~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~-l~s~g~D~~ 280 (287)
T d1pgua2 213 WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADAC 280 (287)
T ss_dssp ECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSC
T ss_pred ecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCCE-EEEEECCCe
Confidence 99854 46899999999999999987 445554 99999999865 666776743
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=6.2e-11 Score=120.36 Aligned_cols=114 Identities=9% Similarity=0.177 Sum_probs=89.1
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----cCCC
Q 004989 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----ASRS 657 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~ 657 (720)
+..+++.....+.+..+. +|...|.+++|++ ++|||||.|++|+|||+.... +...+ .+..
T Consensus 197 g~i~~~d~~~~~~~~~~~-----~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~~--------~~~~~~~~~~~~~ 261 (342)
T d2ovrb2 197 TSIRVWDVETGNCIHTLT-----GHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQ--------CLQTLQGPNKHQS 261 (342)
T ss_dssp SCEEEEETTTCCEEEEEC-----CCCSCEEEEEEET--TEEEEEETTSCEEEEETTTCC--------EEEEECSTTSCSS
T ss_pred CeEEEeecccceeeeEec-----ccccceeEEecCC--CEEEEEcCCCEEEEEeccccc--------ccccccccceeee
Confidence 345566666666666654 4578899988865 699999999999999987652 11111 2345
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------------EEEEeecCCceEEEecCcc
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------------v~~v~~~~~~~~~~~~~~~ 713 (720)
.+.+++|++ ++|+||+.||+|+|||+++|+++++ |++++|++.+..+++|+-|
T Consensus 262 ~~~~~~~~~---~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~d 326 (342)
T d2ovrb2 262 AVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 326 (342)
T ss_dssp CEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSS
T ss_pred ceeecccCC---CeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 678888876 5899999999999999999999875 8999999999999999876
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.19 E-value=3.2e-11 Score=125.07 Aligned_cols=123 Identities=4% Similarity=-0.020 Sum_probs=91.6
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE
Q 004989 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI 662 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l 662 (720)
.++.+.+.+.+..+ .+|...|.+|+|+|++.+ +++||.|+.|++||....... ...... .+...|.+|
T Consensus 142 ~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~-----~~~~~~~~~~~~v~~v 211 (325)
T d1pgua1 142 VFISWDSGNSLGEV-----SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS-----ASDRTHHKQGSFVRDV 211 (325)
T ss_dssp EEEETTTCCEEEEC-----CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE-----EEECSSSCTTCCEEEE
T ss_pred EEEeecccccceee-----eecccccccccccccccceEEEeecccccccccccccccc-----eecccccCCCCccEEe
Confidence 33444444555554 456899999999999985 789999999999998764211 011111 235569999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccceEEc
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
+|+|+.+.+|||++.||+|+|||+++++++.+ +++++| +.+.++++|+.|...++
T Consensus 212 ~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~-~dg~~l~s~s~D~~i~i 277 (325)
T d1pgua1 212 EFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSW-LDSQKFATVGADATIRV 277 (325)
T ss_dssp EECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEE-SSSSEEEEEETTSEEEE
T ss_pred eeccccceeccccccccceeeeeeccccccccccccccccccceeeeec-cCCCEEEEEeCCCeEEE
Confidence 99998888999999999999999999999886 455555 45778889998876543
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.18 E-value=7.3e-11 Score=122.34 Aligned_cols=122 Identities=13% Similarity=0.164 Sum_probs=85.7
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCC
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSK 658 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~ 658 (720)
++..+++.....+....+. .+..|...|.+|+|+|| +.+||||+.|++|+|||.++.. ++..+. |...
T Consensus 181 d~~v~~~d~~~~~~~~~~~--~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~--------~~~~l~~~~~~ 250 (325)
T d1pgua1 181 DGSVVFYQGPPFKFSASDR--THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE--------FLKYIEDDQEP 250 (325)
T ss_dssp TTEEEEEETTTBEEEEEEC--SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC--------EEEECCBTTBC
T ss_pred ccccccccccccccceecc--cccCCCCccEEeeeccccceeccccccccceeeeeecccc--------ccccccccccc
Confidence 3344555555566555554 24567899999999997 5899999999999999987651 233332 2333
Q ss_pred ----EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE-----------EEEeecCCceEEEecCccce
Q 004989 659 ----LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL-----------YCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 659 ----i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~v-----------~~v~~~~~~~~~~~~~~~~~ 715 (720)
+.+++|. ++.+|||++.|++|+|||+++++++.++ .++.|++.. .+++|+.|.-
T Consensus 251 v~~~~~s~~~~--dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~dg~ 319 (325)
T d1pgua1 251 VQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG-RIISLSLDGT 319 (325)
T ss_dssp CCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETT-EEEEEETTSC
T ss_pred cccceeeeecc--CCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCC-EEEEEECCCE
Confidence 4555554 3569999999999999999999999872 344555444 4667777653
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.12 E-value=1.3e-10 Score=117.47 Aligned_cols=104 Identities=12% Similarity=0.186 Sum_probs=86.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
...+.+++|+||+++||+|+.|+.|++||+++... ..+..+.|...|++++|+|+ +.+|++++.|+.|++||+
T Consensus 136 ~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~~~~~ 208 (299)
T d1nr0a2 136 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV------SEVKTIVHPAEITSVAFSNN-GAFLVATDQSRKVIPYSV 208 (299)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE------EEEEEEECSSCEEEEEECTT-SSEEEEEETTSCEEEEEG
T ss_pred ccccccccccccccccccccccccccccccccccc------cccccccccccccccccccc-cccccccccccccccccc
Confidence 35578999999999999999999999999865410 12344566788999999995 569999999999999999
Q ss_pred CCCcEEEE----------EEEEeecCCceEEEecCccceEE
Q 004989 687 LHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 687 ~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.++..+.. |+|++|+|.+.++++|+.|-..+
T Consensus 209 ~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~ 249 (299)
T d1nr0a2 209 ANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 249 (299)
T ss_dssp GGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cccccccccccccccccccccccccccccceEEEcCCCEEE
Confidence 98876542 89999999999999999876543
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=3.2e-10 Score=112.21 Aligned_cols=78 Identities=13% Similarity=0.166 Sum_probs=65.3
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
..|...|.|++| ||++|||||.|++|+|||+.+. .++..+. |.+.|.+|+|++ ++||||+.||+|+
T Consensus 12 ~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~--------~~~~~l~~H~~~V~~v~~~~---~~l~s~s~D~~i~ 78 (293)
T d1p22a2 12 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--------ECKRILTGHTGSVLCLQYDE---RVIITGSSDSTVR 78 (293)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--------CEEEEECCCSSCEEEEECCS---SEEEEEETTSCEE
T ss_pred CCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCC--------cEEEEEecCCCCEeeeeccc---ceeeccccccccc
Confidence 456788998766 7999999999999999998775 3555554 477899999864 6999999999999
Q ss_pred EEECCCCcEEEE
Q 004989 683 VGQVLHLIYFSA 694 (720)
Q Consensus 683 lWD~~tg~~~~~ 694 (720)
+||+.++.....
T Consensus 79 ~~~~~~~~~~~~ 90 (293)
T d1p22a2 79 VWDVNTGEMLNT 90 (293)
T ss_dssp EEESSSCCEEEE
T ss_pred cccccccccccc
Confidence 999999988765
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.08 E-value=8.5e-11 Score=120.00 Aligned_cols=113 Identities=11% Similarity=0.092 Sum_probs=82.1
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEE
Q 004989 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 663 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 663 (720)
.+++...+...+..+ .+|...|.+++|+ +++||+|+.|++|+|||+.+.. ... ..+...+.+++
T Consensus 225 i~i~d~~~~~~~~~~-----~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--------~~~-~~~~~~~~~~~ 288 (355)
T d1nexb2 225 IRIWDLENGELMYTL-----QGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS--------RKF-SYHHTNLSAIT 288 (355)
T ss_dssp EEEEETTTCCEEEEE-----CCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCC--------EEE-EEECTTCCCCC
T ss_pred EEeeecccccccccc-----ccccccccccccc--cceeeeeecccccccccccccc--------eec-ccccCCceEEE
Confidence 344455555555555 4568999999997 4799999999999999987652 111 12344566655
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCccc
Q 004989 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 664 w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+.+.++.+|++|+ ||+|+|||+++|+++.. |++++|++. .++..++.|-
T Consensus 289 ~~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg 345 (355)
T d1nexb2 289 TFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDG 345 (355)
T ss_dssp EEEECSSEEEEEE-TTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSS
T ss_pred EEcCCCCEEEEEe-CCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCC
Confidence 5444566777776 99999999999998853 999999987 4677777774
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=3.8e-10 Score=114.39 Aligned_cols=88 Identities=11% Similarity=0.067 Sum_probs=68.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCC
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYI 668 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~ 668 (720)
..++....|+ ||.+.|.+ +|++||++|||||.|++|+|||+.++ .++..+. |...|.+++|+|
T Consensus 4 ~~~~~~~~l~-----GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~--------~~~~~~~~h~~~V~~v~~~~-- 67 (342)
T d2ovrb2 4 GELKSPKVLK-----GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTG--------KCLRTLVGHTGGVWSSQMRD-- 67 (342)
T ss_dssp SCCCCCEEEE-----CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTC--------CEEEECCCCSSCEEEEEEET--
T ss_pred CCCCcCEEEC-----CcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCC--------CEEEEEeCCCCCEEEEEeCC--
Confidence 4445555554 45776654 36668999999999999999998876 3454444 467899999997
Q ss_pred CCEEEEEeCCCcEEEEECCCCcEEEE
Q 004989 669 KSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
++|+||+.|+++++|+.........
T Consensus 68 -~~l~s~s~D~~~~~~~~~~~~~~~~ 92 (342)
T d2ovrb2 68 -NIIISGSTDRTLKVWNAETGECIHT 92 (342)
T ss_dssp -TEEEEEETTSCEEEEETTTTEEEEE
T ss_pred -Cccccceecccccccccccccceec
Confidence 4899999999999999998876654
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.02 E-value=5.6e-10 Score=114.95 Aligned_cols=98 Identities=5% Similarity=-0.074 Sum_probs=81.2
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
+|...|.+++|+|||++||++|.+. .|+|||..++. ......+...|.+++|+|+ +++|++++.|+.++
T Consensus 40 ~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~--------~~~~~~~~~~v~~~~~spd-g~~l~~~~~~~~~~ 110 (360)
T d1k32a3 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVFAMGVDRN-GKFAVVANDRFEIM 110 (360)
T ss_dssp SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEEEEEECTT-SSEEEEEETTSEEE
T ss_pred cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc--------EEEeeCCCceEEeeeeccc-ccccceeccccccc
Confidence 4678899999999999999887664 89999988752 2223345778999999996 56999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecC
Q 004989 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 683 lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~ 711 (720)
+||+.++++... +.+++|+|.+..+++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~ 146 (360)
T d1k32a3 111 TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGF 146 (360)
T ss_dssp EEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEE
T ss_pred cccccccceeeeeecccccccchhhccceeeeeeec
Confidence 999999998765 67899999999887543
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.88 E-value=2.1e-09 Score=110.51 Aligned_cols=95 Identities=7% Similarity=-0.025 Sum_probs=76.5
Q ss_pred EEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC--CcEEEEECCC
Q 004989 612 SLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE--GVVQVGQVLH 688 (720)
Q Consensus 612 sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D--~~v~lWD~~t 688 (720)
+=.||| ||+++|+++ ++.|.|||...+ ++..+.|...|.+++|+|+++ +|++++.| .+|++||+.+
T Consensus 7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~---------~~~~~~~~~~v~~~~~spDg~-~l~~~~~~~g~~v~v~d~~~ 75 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGT---------YVLKVPEPLRIRYVRRGGDTK-VAFIHGTREGDFLGIYDYRT 75 (360)
T ss_dssp EEEEEECGGGCEEEEE-TTEEEEECTTSS---------BEEECSCCSCEEEEEECSSSE-EEEEEEETTEEEEEEEETTT
T ss_pred cccccCCCCCEEEEEE-CCeEEEEECCCC---------cEEEccCCCCEEEEEECCCCC-EEEEEEcCCCCEEEEEECCC
Confidence 456999 999999987 579999998654 344456778899999999765 66655543 3899999999
Q ss_pred CcEEEE------EEEEeecCCceEEEecCccceEE
Q 004989 689 LIYFSA------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 689 g~~~~~------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+.... +++++|+|.+..+++++.+...+
T Consensus 76 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~ 110 (360)
T d1k32a3 76 GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIM 110 (360)
T ss_dssp CCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEE
T ss_pred CcEEEeeCCCceEEeeeecccccccceeccccccc
Confidence 987764 89999999999999998887554
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.86 E-value=6.9e-10 Score=111.46 Aligned_cols=101 Identities=8% Similarity=0.051 Sum_probs=78.6
Q ss_pred EEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEE
Q 004989 593 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 593 ~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~l 672 (720)
+++++| .||...|.+|+|+| |||||.|++|++||..+.. -.|...|.++.|++. ..+
T Consensus 4 ~~i~~l-----~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~------------~~h~~~V~~~~~~~~--~~~ 60 (287)
T d1pgua2 4 EVLKTI-----SGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH------------QDHSNLIVSLDNSKA--QEY 60 (287)
T ss_dssp EEEEEE-----CCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE------------CCCCSCEEEEECCST--TCC
T ss_pred ceeEEE-----CCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC------------CCCCCCEEEEEecCC--CeE
Confidence 556666 45699999999998 9999999999999987652 134667999999874 468
Q ss_pred EEEeCCCcEEEEECCCCcEEEEEEEEeecCCceEEEecCccceE
Q 004989 673 ASSNFEGVVQVGQVLHLIYFSALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 673 aS~s~D~~v~lWD~~tg~~~~~v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|++.|++|++||+.+.+.-....++++++.+..+..++-+.+.
T Consensus 61 ~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (287)
T d1pgua2 61 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLL 104 (287)
T ss_dssp EEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEE
T ss_pred EEEeeccccccccccccccccceeeeeeccCCceEEEeecccce
Confidence 99999999999998765544446677788877777766655543
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.84 E-value=2.3e-09 Score=115.99 Aligned_cols=100 Identities=17% Similarity=0.055 Sum_probs=76.5
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----CCCC
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----SRSK 658 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~ 658 (720)
-..++.-.+.++++.+..| ..|.+|+|||||+++++++.|++|+|||+.+.... .+.++. +.+-
T Consensus 43 ~v~v~D~~t~~v~~~~~~g------~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~------~~~~i~~~~~~~~~ 110 (432)
T d1qksa2 43 QIALIDGSTYEIKTVLDTG------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT------TVAEIKIGSEARSI 110 (432)
T ss_dssp EEEEEETTTCCEEEEEECS------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC------EEEEEECCSEEEEE
T ss_pred EEEEEECCCCcEEEEEeCC------CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCce------EEEEEecCCCCCCe
Confidence 4577778889999999752 45999999999999999999999999999875211 112222 1233
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
+.+..|+|+++.++++++.|++|+|||+.+++.+..
T Consensus 111 ~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~ 146 (432)
T d1qksa2 111 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI 146 (432)
T ss_dssp EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEE
T ss_pred EEecccCCCCCEEEEEcCCCCeEEEEeCccccceee
Confidence 455567777665568888999999999999998876
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.76 E-value=7.4e-09 Score=111.13 Aligned_cols=102 Identities=16% Similarity=0.076 Sum_probs=78.1
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----CC
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----SR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~ 656 (720)
++-.++|.-.+.++++++..| ..|.+|+|||||++|++++.|++|++||+.+.... .+.++. +.
T Consensus 41 dg~v~vwD~~t~~~~~~l~~g------~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~------~~~~i~~~~~~~ 108 (426)
T d1hzua2 41 AGQIALVDGDSKKIVKVIDTG------YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT------KVAEIKIGIEAR 108 (426)
T ss_dssp TTEEEEEETTTCSEEEEEECC------SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE------EEEEEECCSEEE
T ss_pred CCEEEEEECCCCcEEEEEeCC------CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCcee------EEEEEeCCCCCc
Confidence 345677888889999999852 45999999999999999999999999999876211 111221 23
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
+.+.+++|+|+++.+++++..|++|++||..+++++..
T Consensus 109 ~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~ 146 (426)
T d1hzua2 109 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQI 146 (426)
T ss_dssp EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEE
T ss_pred ceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEE
Confidence 34667788887664556677899999999999998875
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.73 E-value=2.6e-08 Score=100.00 Aligned_cols=102 Identities=8% Similarity=0.081 Sum_probs=69.6
Q ss_pred CCeEEEE-ECCCCCEEEEeeCCCcEEEeeCCccccccccc-ccce-------EEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 608 NLVCSLS-FDRDGELFAAAGVNKKIKVFECDAIINENRDI-HYPV-------VEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 608 ~~V~sv~-f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~-~~~~-------~~~~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
..+.++. +..++..+++++.|++|.+|++.......... ..+. ....+...|++|+|+|++ ++||||+.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~-~~lasg~~D 272 (342)
T d1yfqa_ 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSD 272 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETT
T ss_pred cceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCc-cEEEEECCC
Confidence 4455555 45677899999999999999986532111100 0000 012234568999999965 589999999
Q ss_pred CcEEEEECCCCcEEEE------EEEEeecCCceEEEec
Q 004989 679 GVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~ 710 (720)
|+|+|||+.+++.+.+ ..+++|++.+..++.+
T Consensus 273 g~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~~~~l~~a 310 (342)
T d1yfqa_ 273 GIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLA 310 (342)
T ss_dssp SCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEE
T ss_pred CEEEEEECCCCcEEEEecCCCCCEEEEEEeCCCEEEEE
Confidence 9999999999999987 3445555555555443
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=98.69 E-value=8.6e-08 Score=95.51 Aligned_cols=118 Identities=8% Similarity=0.013 Sum_probs=93.1
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004989 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
...+...+.+++++++.+ ..+..|+|+|||++| ++++.+++|++||+.+. .++..+.....+..+
T Consensus 14 v~v~D~~t~~~~~~i~~g------~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~--------~~~~~~~~~~~~~~~ 79 (301)
T d1l0qa2 14 ISVIDVTSNKVTATIPVG------SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVPAGSSPQGV 79 (301)
T ss_dssp EEEEETTTTEEEEEEECS------SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEECSSSEEEE
T ss_pred EEEEECCCCeEEEEEECC------CCceEEEEeCCCCEEEEEECCCCEEEEEECCCC--------ceeeeeecccccccc
Confidence 355666788899998753 457899999999975 67788999999999876 245555555678999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCccce
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQEV 715 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~-~~~~~~~~ 715 (720)
+|++++...++++..++.+.+||..+++.+.. ..++.|++.+..+ ..++.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~ 139 (301)
T d1l0qa2 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKT 139 (301)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred ccccccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccc
Confidence 99998777788888899999999999998876 5788999887654 45555543
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.63 E-value=1.6e-07 Score=92.08 Aligned_cols=126 Identities=13% Similarity=0.184 Sum_probs=82.5
Q ss_pred cchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc-------------
Q 004989 577 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN------------- 643 (720)
Q Consensus 577 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~------------- 643 (720)
.+-.++..++|...+.+++.+|+ +|.+.|.+|+| |+++|||||.|++|++||+.......
T Consensus 30 sgs~Dg~i~vWd~~~~~~~~~l~-----~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (293)
T d1p22a2 30 SGLRDNTIKIWDKNTLECKRILT-----GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 102 (293)
T ss_dssp EEESSSCEEEEESSSCCEEEEEC-----CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEe-----cCCCCEeeeec--ccceeeccccccccccccccccccccccccccccccccc
Confidence 33455677888888888888885 45899999988 57899999999999999986521100
Q ss_pred ----------ccc----------c--cceE-EecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------
Q 004989 644 ----------RDI----------H--YPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------ 694 (720)
Q Consensus 644 ----------~~~----------~--~~~~-~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------ 694 (720)
.+. . .... ...+...|.++.|.+ ..+++++.|++|++||+++++.+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~ 179 (293)
T d1p22a2 103 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 179 (293)
T ss_dssp CCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred ccccceeecccccceeEeeccccccccccccccccccccccceecc---cccccccCCCceeeecCCCCcEEEEEccccc
Confidence 000 0 0000 112244566666654 4677888888888888888888766
Q ss_pred -EEEEeecCCceEEEecCccc
Q 004989 695 -LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 695 -v~~v~~~~~~~~~~~~~~~~ 714 (720)
+.++.+++. .+.+|..|.
T Consensus 180 ~v~~~~~~~~--~l~~~~~dg 198 (293)
T d1p22a2 180 GIACLQYRDR--LVVSGSSDN 198 (293)
T ss_dssp CEEEEEEETT--EEEEEETTS
T ss_pred ccccccCCCC--eEEEecCCC
Confidence 455555543 344444443
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=98.58 E-value=4.1e-08 Score=99.71 Aligned_cols=90 Identities=7% Similarity=-0.068 Sum_probs=71.8
Q ss_pred EEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE--ecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc
Q 004989 613 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI 690 (720)
Q Consensus 613 v~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~ 690 (720)
++|+++|+||++++.|++|.|||+.+. ..+.. +.+.....+|+|+|+++.++++++.|++|.+||+.+++
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~--------~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~ 73 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASD--------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 73 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTT--------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCC--------CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCe
Confidence 579999999999999999999999876 23443 33455678999999876566888899999999999999
Q ss_pred EEEEE-------------EEEeecCCceEEEec
Q 004989 691 YFSAL-------------YCIVLNKLLIIFRYG 710 (720)
Q Consensus 691 ~~~~v-------------~~v~~~~~~~~~~~~ 710 (720)
.+.++ ..++|++.+..+.-.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~ 106 (346)
T d1jmxb_ 74 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYAT 106 (346)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEE
T ss_pred eeeeecccccccccCCceEEEEEecCCCEEEEE
Confidence 88762 467888887655433
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.52 E-value=7.7e-08 Score=102.93 Aligned_cols=90 Identities=6% Similarity=-0.167 Sum_probs=70.1
Q ss_pred ECCCCC--EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE
Q 004989 615 FDRDGE--LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF 692 (720)
Q Consensus 615 f~~dg~--~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~ 692 (720)
|++|.+ ++++++.|++|+|||..+. ..+..+.++..+..|+|||++ .+|++++.|++|+|||+.|++..
T Consensus 26 ~~~d~~~~~~V~~~~dg~v~vwD~~t~--------~~~~~l~~g~~~~~vafSPDG-k~l~~~~~d~~v~vwd~~t~~~~ 96 (426)
T d1hzua2 26 NDLDLPNLFSVTLRDAGQIALVDGDSK--------KIVKVIDTGYAVHISRMSASG-RYLLVIGRDARIDMIDLWAKEPT 96 (426)
T ss_dssp SCCCGGGEEEEEETTTTEEEEEETTTC--------SEEEEEECCSSEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCE
T ss_pred ccCCCCeEEEEEEcCCCEEEEEECCCC--------cEEEEEeCCCCeeEEEECCCC-CEEEEEeCCCCEEEEEccCCcee
Confidence 555544 6799999999999999886 355666666679999999965 58999999999999999999754
Q ss_pred EE------------EEEEeecCCceEE-EecCcc
Q 004989 693 SA------------LYCIVLNKLLIIF-RYGMFQ 713 (720)
Q Consensus 693 ~~------------v~~v~~~~~~~~~-~~~~~~ 713 (720)
.. +++++|+|.+..+ ..+..+
T Consensus 97 ~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~ 130 (426)
T d1hzua2 97 KVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWP 130 (426)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred EEEEEeCCCCCcceEEeeeecCCCCEEEEeecCC
Confidence 32 5688888888864 443333
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=98.41 E-value=6.9e-07 Score=88.66 Aligned_cols=88 Identities=9% Similarity=0.050 Sum_probs=66.7
Q ss_pred CCCeEEEEECCCCCEEEEeeC---CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGV---NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
...+.+++|+++|..++.++. +++|++||..+. ..+..+.....+.+|+|+|+++.++++++.|++|+|
T Consensus 199 ~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~--------~~~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v 270 (301)
T d1l0qa2 199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN--------KITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSV 270 (301)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT--------EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred cCCcceeeccccccccccccccceeeeeeeeecCCC--------eEEEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEE
Confidence 355788999999997665543 478999998776 233444455678999999987645578889999999
Q ss_pred EECCCCcEEEEEEEEeecCC
Q 004989 684 GQVLHLIYFSALYCIVLNKL 703 (720)
Q Consensus 684 WD~~tg~~~~~v~~v~~~~~ 703 (720)
||+.||+.+.++ .+..+|.
T Consensus 271 ~D~~t~~~~~~~-~vg~~P~ 289 (301)
T d1l0qa2 271 IDTATNTITATM-AVGKNPY 289 (301)
T ss_dssp EETTTTEEEEEE-ECSSSEE
T ss_pred EECCCCeEEEEE-eCCCCCc
Confidence 999999999875 3444443
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=98.33 E-value=5.6e-07 Score=90.90 Aligned_cols=113 Identities=9% Similarity=0.011 Sum_probs=78.9
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~ 668 (720)
..++++..+.+ .+.|.+|+|+|||++| ++++.|++|++|++....... ..+........+..++|+|++
T Consensus 25 ~~l~~~~~~~~------~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~----~~~~~~~~~~~p~~l~~spDg 94 (333)
T d1ri6a_ 25 GALTLTQVVDV------PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL----TFAAESALPGSLTHISTDHQG 94 (333)
T ss_dssp SCEEEEEEEEC------SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE----EEEEEEECSSCCSEEEECTTS
T ss_pred CCeEEEEEEcC------CCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcE----EEeeecccCCCceEEEEcCCC
Confidence 34566666655 6789999999999987 566679999999986542111 112223334557789999975
Q ss_pred CCEEEEEeC-CCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCcc
Q 004989 669 KSQIASSNF-EGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 669 ~~~laS~s~-D~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~ 713 (720)
++|+++++ +++|++|+...+..... +.++.|++.+..+..++.+
T Consensus 95 -~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~ 148 (333)
T d1ri6a_ 95 -QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK 148 (333)
T ss_dssp -SEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG
T ss_pred -CEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccc
Confidence 57777775 77999999887765544 4567888888876666544
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.29 E-value=8.9e-07 Score=89.11 Aligned_cols=81 Identities=9% Similarity=-0.064 Sum_probs=67.5
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.++...+.+++++|++.+++.+ +++|++||+.+. ..+..+.....+.+++|+|++ ++|++++.|++|+|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~--------~~~~~~~~~~~~~~~~~s~dG-~~l~v~~~~~~i~v 305 (337)
T d1pbyb_ 237 RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--------ASIKRVPLPHSYYSVNVSTDG-STVWLGGALGDLAA 305 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECTTS-CEEEEESBSSEEEE
T ss_pred cCCCcceEEEEecccceEEEEc--cccEEEEECCCC--------cEEEEEcCCCCEEEEEECCCC-CEEEEEeCCCcEEE
Confidence 3457889999999999998876 689999999876 234445555678999999965 58999999999999
Q ss_pred EECCCCcEEEEE
Q 004989 684 GQVLHLIYFSAL 695 (720)
Q Consensus 684 WD~~tg~~~~~v 695 (720)
||+.+++.+.++
T Consensus 306 ~D~~t~~~v~~i 317 (337)
T d1pbyb_ 306 YDAETLEKKGQV 317 (337)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCcEEEEE
Confidence 999999999885
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.28 E-value=5e-07 Score=91.02 Aligned_cols=85 Identities=7% Similarity=-0.093 Sum_probs=64.9
Q ss_pred CEEEEeeCCCcEEEeeCCcccccccccccceEEec--C-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE-
Q 004989 620 ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--S-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL- 695 (720)
Q Consensus 620 ~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~-~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~v- 695 (720)
+||+||+.|++|+|||..+. ..+..+. . ...+.+++|+|+++.++++++.|++|.+||+.||+.+..+
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~--------~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~ 73 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKM--------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID 73 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred eEEEEEcCCCEEEEEECCCC--------eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEe
Confidence 58999999999999999876 1233332 1 3347899999976644578889999999999999998863
Q ss_pred -----------EEEeecCCceEEEecCc
Q 004989 696 -----------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 696 -----------~~v~~~~~~~~~~~~~~ 712 (720)
+.++|++.+..+..+..
T Consensus 74 ~~~~~~~~~~~~~v~~s~dg~~l~~~~~ 101 (337)
T d1pbyb_ 74 LSTPEERVKSLFGAALSPDGKTLAIYES 101 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEE
T ss_pred cCCCcccccceeeEEEcCCCcEEEEeec
Confidence 36788888876655543
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.27 E-value=7.8e-07 Score=95.57 Aligned_cols=90 Identities=4% Similarity=-0.144 Sum_probs=69.4
Q ss_pred CCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE--E
Q 004989 616 DRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF--S 693 (720)
Q Consensus 616 ~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~--~ 693 (720)
+++.-++++.+.|++|.|||..+. ..+..+.....+..++|||++ .+||+++.|++|++||+.|++.. .
T Consensus 29 ~~~~~~~v~~~d~g~v~v~D~~t~--------~v~~~~~~g~~~~~v~fSpDG-~~l~~~s~dg~v~~~d~~t~~~~~~~ 99 (432)
T d1qksa2 29 DLENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVA 99 (432)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEE
T ss_pred CCCcEEEEEEcCCCEEEEEECCCC--------cEEEEEeCCCCeeEEEECCCC-CEEEEEcCCCCEEEEEeeCCCceEEE
Confidence 444445799999999999999887 345555555579999999965 69999999999999999988632 2
Q ss_pred E----------EEEEeecCCceE-EEecCccc
Q 004989 694 A----------LYCIVLNKLLII-FRYGMFQE 714 (720)
Q Consensus 694 ~----------v~~v~~~~~~~~-~~~~~~~~ 714 (720)
+ +++++|+|++.. +++++.+.
T Consensus 100 ~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~ 131 (432)
T d1qksa2 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPP 131 (432)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEETT
T ss_pred EEecCCCCCCeEEecccCCCCCEEEEEcCCCC
Confidence 1 677788889985 57776554
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=98.23 E-value=1e-06 Score=88.98 Aligned_cols=81 Identities=4% Similarity=-0.105 Sum_probs=65.8
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
.|...+.++.+++++.+++.++ ++.|++||..+. ..+........+.+++|+|++ .+|++++.|++|+||
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~--------~~~~~~~~~~~~~~va~s~DG-~~l~v~~~d~~v~v~ 318 (346)
T d1jmxb_ 249 DLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQR--------KLIKAANLDHTYYCVAFDKKG-DKLYLGGTFNDLAVF 318 (346)
T ss_dssp ECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTT--------EEEEEEECSSCCCEEEECSSS-SCEEEESBSSEEEEE
T ss_pred cccceeEEEEEeCCCCEEEEec-CCeEEEEECCCC--------cEEEEEcCCCCEEEEEEcCCC-CEEEEEeCCCcEEEE
Confidence 3467889999999999888776 467999998776 234444444569999999965 588999999999999
Q ss_pred ECCCCcEEEEE
Q 004989 685 QVLHLIYFSAL 695 (720)
Q Consensus 685 D~~tg~~~~~v 695 (720)
|+.|++.+.++
T Consensus 319 D~~t~~~i~~i 329 (346)
T d1jmxb_ 319 NPDTLEKVKNI 329 (346)
T ss_dssp ETTTTEEEEEE
T ss_pred ECccCCEEEEE
Confidence 99999999875
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.06 E-value=4.5e-06 Score=89.74 Aligned_cols=115 Identities=9% Similarity=0.068 Sum_probs=84.7
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeC---------CCcEEEeeCCcccccccccccceEEecCCCCEEE
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
+.+....+....|..|...|.+++|||||++||.++. ++.+.|||+.+...... ..+...+..
T Consensus 45 t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l--------~~~~~~~~~ 116 (470)
T d2bgra1 45 YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE--------ERIPNNTQW 116 (470)
T ss_dssp TCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS--------SCCCTTEEE
T ss_pred CCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCccccc--------ccCCccccc
Confidence 3333344444467777888999999999999998864 46778999887621111 123567999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------E-----------------EEEeecCCceEEEecCccce
Q 004989 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------L-----------------YCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 662 l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------v-----------------~~v~~~~~~~~~~~~~~~~~ 715 (720)
+.|||++ ++||... |+.+.+|++.+|+.++. + ..+.|||.+..+++.++|+-
T Consensus 117 ~~~SPDG-~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~ 193 (470)
T d2bgra1 117 VTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT 193 (470)
T ss_dssp EEECSST-TCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred cccccCc-ceeeEee-cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCC
Confidence 9999965 5788754 78999999999987763 1 23569999999999988753
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.00 E-value=4.2e-06 Score=85.29 Aligned_cols=89 Identities=9% Similarity=-0.018 Sum_probs=65.3
Q ss_pred EEEEECCCCCEEEEeeCC----------CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEeCCC
Q 004989 611 CSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEG 679 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~-~laS~s~D~ 679 (720)
..+++++||.+++.++.+ ..|.+||..+. ..+..+.....+.+++|+|+++. ++++++.|+
T Consensus 252 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~--------~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~ 323 (355)
T d2bbkh_ 252 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG--------ERLAKFEMGHEIDSINVSQDEKPLLYALSTGDK 323 (355)
T ss_dssp SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC--------CEEEEEEEEEEECEEEECCSSSCEEEEEETTTT
T ss_pred EEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCC--------cEEEEecCCCCEEEEEEcCCCCeEEEEEECCCC
Confidence 458899999986655443 47999998776 23334444456889999998765 467888899
Q ss_pred cEEEEECCCCcEEEEEEEEeecCCceEE
Q 004989 680 VVQVGQVLHLIYFSALYCIVLNKLLIIF 707 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~v~~v~~~~~~~~~ 707 (720)
+|.|||+.||+.+.+|..+.-.|..+.+
T Consensus 324 ~i~v~D~~tg~~~~~i~~~G~~p~~i~~ 351 (355)
T d2bbkh_ 324 TLYIHDAESGEELRSVNQLGHGPQVITT 351 (355)
T ss_dssp EEEEEETTTCCEEEEECCCCSSCCEEEC
T ss_pred EEEEEECCCCCEEEEEeCcCCCccEEEe
Confidence 9999999999999987555444444443
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=97.94 E-value=4.9e-06 Score=83.68 Aligned_cols=88 Identities=9% Similarity=-0.052 Sum_probs=63.3
Q ss_pred EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------
Q 004989 621 LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------ 694 (720)
Q Consensus 621 ~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------ 694 (720)
.+++++.|++|+|||+.... ....+..+.+...+.+|+|||+++.+++++..|++|++|++.++....+
T Consensus 6 v~v~~~~~~~I~v~~~~~~~-----~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~ 80 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEG-----ALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA 80 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTS-----CEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEECCCCCcEEEEEEcCCC-----CeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecc
Confidence 36888899999999986531 1123344566778999999997654446666799999999986643322
Q ss_pred ----EEEEeecCCceEEEecCcc
Q 004989 695 ----LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 695 ----v~~v~~~~~~~~~~~~~~~ 713 (720)
..+++|+|.+..+..+.++
T Consensus 81 ~~~~p~~l~~spDg~~l~v~~~~ 103 (333)
T d1ri6a_ 81 LPGSLTHISTDHQGQFVFVGSYN 103 (333)
T ss_dssp CSSCCSEEEECTTSSEEEEEETT
T ss_pred cCCCceEEEEcCCCCEEeecccC
Confidence 4568999999877766554
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=97.92 E-value=2.1e-05 Score=80.76 Aligned_cols=85 Identities=6% Similarity=-0.125 Sum_probs=65.4
Q ss_pred CCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEeCCCcEEEEECCCCcEEEE
Q 004989 616 DRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 616 ~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~-~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
..++..++++..++.|.+||..++ .++..+.+...+.+++|+|+++. ++++++.|++|+|||+.||+.+.+
T Consensus 285 ~~~~~~~~~~~~~~~v~~~d~~t~--------~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~ 356 (373)
T d2madh_ 285 TSEQSAWKLHAAAKEVTSVTGLVG--------QTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred cCCCceEEeecCCCeEEEEECCCC--------cEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEE
Confidence 334444566777889999998776 35556666677999999997765 457899999999999999999998
Q ss_pred EEEEeecCCceEEE
Q 004989 695 LYCIVLNKLLIIFR 708 (720)
Q Consensus 695 v~~v~~~~~~~~~~ 708 (720)
+..+...|....+.
T Consensus 357 ~~~~g~~P~~l~~~ 370 (373)
T d2madh_ 357 TVELGSGPQVLSVM 370 (373)
T ss_pred ECCCCCCCcEEEEe
Confidence 76666666666554
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=97.64 E-value=7.7e-05 Score=76.29 Aligned_cols=80 Identities=9% Similarity=-0.061 Sum_probs=58.2
Q ss_pred CCCCCeEEEEECCCCCEEEEe-----eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe---
Q 004989 605 NSSNLVCSLSFDRDGELFAAA-----GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN--- 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s--- 676 (720)
.+...+.+++|+|||+.++.. +.+..|.|||..++ ..+..+... ....++|+|+++ +|+.++
T Consensus 18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg--------~~~~~~~~~-~~~~~a~SpDG~-~l~va~~~~ 87 (373)
T d2madh_ 18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSG--------SILGHVNGG-FLPNPVAAHSGS-EFALASTSF 87 (373)
T ss_pred cCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCC--------CEEEEEeCC-CCccEEEcCCCC-EEEEEeecC
Confidence 356889999999999986543 33567999998776 234343322 234799999654 777664
Q ss_pred -------CCCcEEEEECCCCcEEEE
Q 004989 677 -------FEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 677 -------~D~~v~lWD~~tg~~~~~ 694 (720)
.|++|+|||+.+++.+..
T Consensus 88 ~~~~~~~~~~~v~v~D~~t~~~~~~ 112 (373)
T d2madh_ 88 SRIAKGKRTDYVEVFDPVTFLPIAD 112 (373)
T ss_pred CcccccccceEEEEEECCCCcEEEE
Confidence 468899999999998876
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.43 E-value=0.00014 Score=74.79 Aligned_cols=91 Identities=10% Similarity=-0.070 Sum_probs=61.8
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec----
Q 004989 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA---- 654 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~---- 654 (720)
-.+.++++++..+ . ...++|+|||++|+.++ .|++|++||..++. ++..+.
T Consensus 53 ~~~~~~~~~~~~~-----~--~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~--------~~~~i~~p~~ 117 (368)
T d1mdah_ 53 AGCGVTLGHSLGA-----F--LSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--------PIADIELPDA 117 (368)
T ss_dssp TTTTEEEEEEEEC-----T--TCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--------EEEEEEETTS
T ss_pred CCCCcEEEEEeCC-----C--CCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCc--------EeeeecCCcc
Confidence 3556677776521 1 23489999999888754 47889999988762 222211
Q ss_pred ----CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004989 655 ----SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 655 ----~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
....-..++|+|+++.++++...+++|.+||+.+++.+..
T Consensus 118 ~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~ 161 (368)
T d1mdah_ 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQL 161 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEE
T ss_pred ceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEE
Confidence 1112346899998765444444689999999999998886
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.24 E-value=0.00018 Score=73.96 Aligned_cols=87 Identities=8% Similarity=-0.110 Sum_probs=60.4
Q ss_pred EEEEECCCCCEEEEeeC---------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCE-EEEEeCCCc
Q 004989 611 CSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ-IASSNFEGV 680 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~-laS~s~D~~ 680 (720)
..++++|++..+..+.. ..+|.+||..+.. ++..+.....+.+++|+|+++.+ ++++..|++
T Consensus 267 ~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~--------~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~ 338 (368)
T d1mdah_ 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ--------TSGPISNGHDSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------EEECCEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred eeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCc--------EeEEecCCCceeEEEECCCCCEEEEEEeCCCCe
Confidence 45788999886543322 2469999988762 33333334468899999987664 578888999
Q ss_pred EEEEECCCCcEEEEEEEEeecCCceE
Q 004989 681 VQVGQVLHLIYFSALYCIVLNKLLII 706 (720)
Q Consensus 681 v~lWD~~tg~~~~~v~~v~~~~~~~~ 706 (720)
|.|||+.||+.+.+|. +...|.+..
T Consensus 339 v~v~D~~tgk~~~~i~-~g~~P~~l~ 363 (368)
T d1mdah_ 339 LDIYDAASDQDQSSVE-LDKGPESLS 363 (368)
T ss_dssp EEEEESSSCEEEEECC-CCSCCCEEE
T ss_pred EEEEECCCCCEEEEEE-CCCCCCEEE
Confidence 9999999999998752 344454443
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.19 E-value=0.00028 Score=75.15 Aligned_cols=94 Identities=10% Similarity=0.025 Sum_probs=68.3
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEeeCCcccccc-cccccceEEe-cCCCCEEEEEEecCCCCEEEEEe---------CCC
Q 004989 611 CSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-RDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSN---------FEG 679 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s---------~D~ 679 (720)
.++.|.+||+++... |+.|.+||..++.... .+.+ .+ .+...|.++.|||++ .+||.++ +++
T Consensus 20 ~~~~W~~d~~~~~~~--~~~~~~~~~~t~~~~~~~~~~----~~~~~~~~i~~~~~SpDg-~~i~~~~~~~~~~r~s~~~ 92 (470)
T d2bgra1 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENS----TFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTA 92 (470)
T ss_dssp CCCEECSSSEEEEES--SSCEEEEETTTCCEEEEECTT----TTTTSSSCCCEEEECTTS-SEEEEEEEEEECSSSCEEE
T ss_pred cCCEeCCCCEEEEEc--CCcEEEEECCCCCEEEEEchh----hhhhccCccceeEECCCC-CEEEEEECCcceeeeccCc
Confidence 357899999998764 7889999998873211 0000 11 123569999999965 5777763 467
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004989 680 VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
.+.|||+.+|+.... +..+.|||.+..+++.+
T Consensus 93 ~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~ 130 (470)
T d2bgra1 93 SYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW 130 (470)
T ss_dssp EEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE
T ss_pred eEEEEECCCCcccccccCCccccccccccCcceeeEee
Confidence 889999999975432 78999999999998854
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.07 E-value=0.0004 Score=69.93 Aligned_cols=90 Identities=10% Similarity=-0.076 Sum_probs=61.4
Q ss_pred EEECCCCCEEEEe-----eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEE---------eCC
Q 004989 613 LSFDRDGELFAAA-----GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS---------NFE 678 (720)
Q Consensus 613 v~f~~dg~~lat~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~---------s~D 678 (720)
.+.+|||+.++.+ +.+.+|.|||..++ .++..+.. +.+..++|||+++.+.+++ +.|
T Consensus 7 ~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg--------~~~~~~~~-g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d 77 (355)
T d2bbkh_ 7 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG--------RVIGMIDG-GFLPNPVVADDGSFIAHASTVFSRIARGERT 77 (355)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT--------EEEEEEEE-CSSCEEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred EeeCCCCCEEEEEecccCCCcCeEEEEECCCC--------cEEEEEEC-CCCCceEEcCCCCEEEEEeCCCccccccCCC
Confidence 3568999976543 35678999998876 23433322 2345799999776443332 347
Q ss_pred CcEEEEECCCCcEEEEE--------------EEEeecCCceEEEecC
Q 004989 679 GVVQVGQVLHLIYFSAL--------------YCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~v--------------~~v~~~~~~~~~~~~~ 711 (720)
+.|++||+.+++.+.++ ..++|++.+..+...+
T Consensus 78 ~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~ 124 (355)
T d2bbkh_ 78 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 124 (355)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEE
T ss_pred CEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEec
Confidence 89999999999998874 2467888876554433
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=96.99 E-value=0.004 Score=61.99 Aligned_cols=108 Identities=12% Similarity=0.103 Sum_probs=78.5
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 670 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~ 670 (720)
..++++++.. ..++..|+++|||.+++|...+++|..||...... ........+.+++|+|++ +
T Consensus 17 ~~~v~~~~p~------~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~---------~~~~~~~~~~gla~~~dG-~ 80 (302)
T d2p4oa1 17 PAKIITSFPV------NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ---------IHATVEGKVSGLAFTSNG-D 80 (302)
T ss_dssp CEEEEEEECT------TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE---------EEEECSSEEEEEEECTTS-C
T ss_pred cccEEEECCC------CCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEE---------EEEcCCCCcceEEEcCCC-C
Confidence 3678888864 35899999999999999999999999998553311 111224568999999965 5
Q ss_pred EEEEEeCCCcEEEEECCCCc--E--EEE------EEEEeecCCceEEEecCccc
Q 004989 671 QIASSNFEGVVQVGQVLHLI--Y--FSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 671 ~laS~s~D~~v~lWD~~tg~--~--~~~------v~~v~~~~~~~~~~~~~~~~ 714 (720)
++++...++.+.+|+..+.. . +.. .+.+++.+.+.++...+.+.
T Consensus 81 l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~ 134 (302)
T d2p4oa1 81 LVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRG 134 (302)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTT
T ss_pred eEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccc
Confidence 88887778888888764332 1 111 57788888888888776553
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.77 E-value=0.0044 Score=60.10 Aligned_cols=27 Identities=11% Similarity=0.096 Sum_probs=23.6
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
++|+|+.|.|||++.++.+-++||+.+
T Consensus 185 l~HgD~~~~Nil~~~~~~~~lIDwe~a 211 (263)
T d1j7la_ 185 FSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred EEEeeccCcceeecCCceEEEeechhc
Confidence 789999999999987665679999877
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=95.40 E-value=0.0033 Score=66.40 Aligned_cols=100 Identities=11% Similarity=0.037 Sum_probs=64.6
Q ss_pred eEEEEECCCCCE-EEEeeCCCcEEEeeCCccccc---ccccccceE-EecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 610 VCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINE---NRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 610 V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~---~~~~~~~~~-~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
...|+++|||+| ++++..|.+|.|||+.+.... ..+....+. +....-...-.+|.+. ++.++|...|.+|..|
T Consensus 260 PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~-g~~yts~~~ds~v~kw 338 (441)
T d1qnia2 260 PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGR-GNAYTTLFIDSQVCKW 338 (441)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSS-SEEEEEETTTTEEEEE
T ss_pred ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCC-ceEEEcccccceEEEe
Confidence 567999999997 588899999999998764211 111101111 1111112344689884 5678888899999999
Q ss_pred ECC---------CCcEEE-------------EEEEEeecCCceEEEec
Q 004989 685 QVL---------HLIYFS-------------ALYCIVLNKLLIIFRYG 710 (720)
Q Consensus 685 D~~---------tg~~~~-------------~v~~v~~~~~~~~~~~~ 710 (720)
++. +...+. .+.++.|+|.+.+++++
T Consensus 339 ~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~ 386 (441)
T d1qnia2 339 NIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVL 386 (441)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEE
T ss_pred ccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEec
Confidence 973 112221 14456788899888887
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=94.51 E-value=0.098 Score=53.08 Aligned_cols=82 Identities=9% Similarity=-0.120 Sum_probs=53.6
Q ss_pred CCCeEEEEECCCCCEEEEeeC-CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGV-NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+++|+|||+++++++. ..+|.+|++..... ... ..++........-..++|+|+++...++...+++|.+||
T Consensus 144 ~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~-~~~-~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~ 221 (365)
T d1jofa_ 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE-VEL-VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC-EEE-EEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCc-eee-ccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEE
Confidence 456899999999997666543 56888887653210 000 001111122456789999997765556777899999999
Q ss_pred CCCCc
Q 004989 686 VLHLI 690 (720)
Q Consensus 686 ~~tg~ 690 (720)
+.+++
T Consensus 222 ~~~~~ 226 (365)
T d1jofa_ 222 IDPAT 226 (365)
T ss_dssp ECTTT
T ss_pred ecCCC
Confidence 87654
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.67 E-value=0.27 Score=46.23 Aligned_cols=92 Identities=10% Similarity=-0.047 Sum_probs=56.3
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCC-CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEE-EEeC--CC
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNF--EG 679 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~la-S~s~--D~ 679 (720)
..+........|+|||+.++..+.+ +...||-..... ...............+|||+++ .|| ++.. ..
T Consensus 167 ~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~p~~SPDG~-~i~f~s~~~~~~ 238 (269)
T d2hqsa1 167 TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT-------GGVQVLSSTFLDETPSLAPNGT-MVIYSSSQGMGS 238 (269)
T ss_dssp CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT-------CCEEECCCSSSCEEEEECTTSS-EEEEEEEETTEE
T ss_pred ecccccccccccccccceeEEEeecCCceeeeEeeccc-------ccceEeecCccccceEECCCCC-EEEEEEcCCCCc
Confidence 3445566788999999987765554 444444432211 0122222344567889999765 555 4332 34
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCC
Q 004989 680 VVQVGQVLHLIYFSA------LYCIVLNKL 703 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------v~~v~~~~~ 703 (720)
.+.+||+..++..+- +..++|||.
T Consensus 239 ~l~~~~~dg~~~~~lt~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 239 VLNLVSTDGRFKARLPATDGQVKFPAWSPY 268 (269)
T ss_dssp EEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred EEEEEECCCCCEEEEeCCCCcEEeEEeCCC
Confidence 678899988765442 667788885
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=93.20 E-value=0.56 Score=45.51 Aligned_cols=80 Identities=16% Similarity=0.146 Sum_probs=59.8
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
...+.+++|++||.++++...++.+.+|+...... ...++...........+++.++ ++++++.+.++.|..+|.
T Consensus 67 ~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~n~i~~~~~-g~~~v~~~~~~~i~~~~~ 141 (302)
T d2p4oa1 67 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG----TVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDV 141 (302)
T ss_dssp SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS----CEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEET
T ss_pred CCCcceEEEcCCCCeEEEecCCceEEEEEeccccc----ceeeccccCCccccceeEEccC-CCEEeeccccccceeeec
Confidence 46789999999999999998899999998654311 1123333344556889999985 568888888899999998
Q ss_pred CCCcE
Q 004989 687 LHLIY 691 (720)
Q Consensus 687 ~tg~~ 691 (720)
.++..
T Consensus 142 ~~~~~ 146 (302)
T d2p4oa1 142 VQPSG 146 (302)
T ss_dssp TTTEE
T ss_pred cCCcc
Confidence 88753
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=92.55 E-value=0.093 Score=54.85 Aligned_cols=99 Identities=6% Similarity=-0.057 Sum_probs=68.7
Q ss_pred CCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEeCCC------
Q 004989 608 NLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEG------ 679 (720)
Q Consensus 608 ~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~-~laS~s~D~------ 679 (720)
..+....++|||+++ ++...+.+|.+||+.+... ..+.++.+......++|+|+++. ++++.+.+.
T Consensus 72 P~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~------~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~d 145 (441)
T d1qnia2 72 PHISMTDGRYDGKYLFINDKANTRVARIRLDIMKT------DKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPND 145 (441)
T ss_dssp CEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEE------EEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCS
T ss_pred CCcceecccCCCCEEEEEcCCCCEEEEEECCCCcE------eeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCc
Confidence 456777889999975 7777899999999987621 01223444567899999997665 444444222
Q ss_pred -----------cEEEEECCCCcEEEE------EEEEeecCCceEEEecCc
Q 004989 680 -----------VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 680 -----------~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~ 712 (720)
++..+|..|.+...+ ...++|++.+......++
T Consensus 146 g~~~~~~~~~~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~ 195 (441)
T d1qnia2 146 GTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCY 195 (441)
T ss_dssp SSCCCGGGEEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEES
T ss_pred ccccccccccceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEec
Confidence 346699999888776 357888888876655544
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=91.78 E-value=0.082 Score=54.49 Aligned_cols=27 Identities=7% Similarity=0.183 Sum_probs=23.7
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcc
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.++|+|+.|.|||++++ .++++||-.|
T Consensus 224 ~LiHGDl~~gNIlv~~~-~~~vID~E~a 250 (392)
T d2pula1 224 TLIHGDLHTGSIFASEH-ETKVIDPEFA 250 (392)
T ss_dssp EEECSCCCGGGEEECSS-CEEECCCTTC
T ss_pred ceeccCCcCCceeEcCC-ceEEechhhc
Confidence 68999999999999865 4899999776
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=91.72 E-value=0.84 Score=43.61 Aligned_cols=94 Identities=12% Similarity=0.057 Sum_probs=67.8
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CCCEEEEEEecCCCCEEEEEeC-CCcE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RSKLSSICWNSYIKSQIASSNF-EGVV 681 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~i~~l~w~~~~~~~laS~s~-D~~v 681 (720)
+......++++++|.++++....++|++||.... .+..+.. -.....|++.|++ +++++-.+ ++.|
T Consensus 155 ~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~---------~~~~~g~~g~~~~P~giavD~~G-~i~Vad~~~~~~v 224 (279)
T d1q7fa_ 155 HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---------YLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNL 224 (279)
T ss_dssp TCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---------EEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEE
T ss_pred cccccceeeeccceeEEeeeccccceeeeecCCc---------eeeeecccccccCCcccccccCC-eEEEEECCCCcEE
Confidence 3567889999999999999999999999996432 1222222 2236789999965 56655444 4579
Q ss_pred EEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004989 682 QVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 682 ~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
.++| .+|+.+.+ -+.|++.+.+.+++..
T Consensus 225 ~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~~ 261 (279)
T d1q7fa_ 225 TIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVLAS 261 (279)
T ss_dssp EEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred EEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCcEEEEe
Confidence 9998 46887665 4678888888887764
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=91.72 E-value=0.36 Score=45.38 Aligned_cols=86 Identities=5% Similarity=-0.167 Sum_probs=55.3
Q ss_pred ECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEE-EEeCCC-----cEEEEEC
Q 004989 615 FDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEG-----VVQVGQV 686 (720)
Q Consensus 615 f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~la-S~s~D~-----~v~lWD~ 686 (720)
.+|| |+.+|-.+ ++.|-+.|+..+ .+.....+...+...+|||+++ .|| ++..++ .|-+.++
T Consensus 6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g--------~~~~Lt~~~~~~~~p~~SPDG~-~iaf~~~~~~~~~~~~i~~~~~ 75 (281)
T d1k32a2 6 LNPDIHGDRIIFVC-CDDLWEHDLKSG--------STRKIVSNLGVINNARFFPDGR-KIAIRVMRGSSLNTADLYFYNG 75 (281)
T ss_dssp EEEEEETTEEEEEE-TTEEEEEETTTC--------CEEEEECSSSEEEEEEECTTSS-EEEEEEEESTTCCEEEEEEEET
T ss_pred cCCCCCCCEEEEEe-CCcEEEEECCCC--------CEEEEecCCCcccCEEECCCCC-EEEEEEeeCCCCCceEEEEEEe
Confidence 4788 99877654 445666687665 1222223356688999999765 666 333222 3666688
Q ss_pred CCCcEEEE-------------EEEEeecCCceEEEec
Q 004989 687 LHLIYFSA-------------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 687 ~tg~~~~~-------------v~~v~~~~~~~~~~~~ 710 (720)
.+|+..+- ...++|++.+..+.+.
T Consensus 76 ~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~ 112 (281)
T d1k32a2 76 ENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIIST 112 (281)
T ss_dssp TTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred cCCceEEeeecCCCccCccccccccccCCCCCEEEEE
Confidence 88866541 3567899999887764
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=91.22 E-value=1.3 Score=41.08 Aligned_cols=71 Identities=7% Similarity=-0.046 Sum_probs=44.2
Q ss_pred CCCeEEEEECCCCCEEEEeeCCC---cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
...|.+-+|||||+.||-..... .+.+.+..... ......+...+....|+|+++.++.....++...+
T Consensus 38 ~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~ 109 (269)
T d2hqsa1 38 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNL 109 (269)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CCceeeeEECCCCCEEEEEEeeccCcceeeeecccCc--------eeEEeeeecccccceecCCCCeeeEeeecCCccce
Confidence 46688999999999998654432 35555544331 22223345678899999987655555555554444
Q ss_pred EE
Q 004989 684 GQ 685 (720)
Q Consensus 684 WD 685 (720)
+.
T Consensus 110 ~~ 111 (269)
T d2hqsa1 110 YV 111 (269)
T ss_dssp EE
T ss_pred ee
Confidence 43
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=89.46 E-value=0.53 Score=44.61 Aligned_cols=96 Identities=6% Similarity=0.046 Sum_probs=62.1
Q ss_pred eEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004989 610 VCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 610 V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~t 688 (720)
-.+|++++||.++ +..+..+.|..++....... .........-..|+++++ +++.++....+.|++++-.+
T Consensus 16 P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~p~gvav~~~-g~i~v~d~~~~~i~~~~~~~ 87 (260)
T d1rwia_ 16 PSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-------VLPFNGLYQPQGLAVDGA-GTVYVTDFNNRVVTLAAGSN 87 (260)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEEC----CEE-------ECCCCSCCSCCCEEECTT-CCEEEEETTTEEEEECTTCS
T ss_pred CCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEE-------EeccCCccCceEEEEcCC-CCEEEeeeeeceeeeeeecc
Confidence 4799999999964 45566788888876543110 111112233467889985 45777777777888888777
Q ss_pred CcEEEE------EEEEeecCCceEEEecCcc
Q 004989 689 LIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 689 g~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
+..+.. .++|++.+.+.++..++..
T Consensus 88 ~~~~~~~~~~~~p~~iavd~~g~i~v~d~~~ 118 (260)
T d1rwia_ 88 NQTVLPFDGLNYPEGLAVDTQGAVYVADRGN 118 (260)
T ss_dssp CCEECCCCSCCSEEEEEECTTCCEEEEEGGG
T ss_pred ceeeeeeeeeeecccccccccceeEeecccc
Confidence 665543 6888998888777765443
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=88.90 E-value=1.3 Score=43.38 Aligned_cols=96 Identities=8% Similarity=-0.014 Sum_probs=61.4
Q ss_pred CCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceE-EecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 608 NLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
..-+.|+|+|||+ ++++-+..++|..||+..-..........+. .......-..+++.+++ ++.++....+.|.++|
T Consensus 177 ~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G-~l~Va~~~~g~V~~~~ 255 (319)
T d2dg1a1 177 SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD-NLYVAMYGQGRVLVFN 255 (319)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC-CEEEEEETTTEEEEEC
T ss_pred ceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCC-CEEEEEcCCCEEEEEC
Confidence 3457899999998 5677788999999997642100000000000 11112224578999854 5666666689999999
Q ss_pred CCCCcEEEEE-------------EEEeecCCce
Q 004989 686 VLHLIYFSAL-------------YCIVLNKLLI 705 (720)
Q Consensus 686 ~~tg~~~~~v-------------~~v~~~~~~~ 705 (720)
- .|+.+.+| +|++|.+...
T Consensus 256 p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~ 287 (319)
T d2dg1a1 256 K-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTN 287 (319)
T ss_dssp T-TSCEEEEEECTTGGGTCSCBCCEEEECTTSC
T ss_pred C-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCC
Confidence 5 79888774 5888876543
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=87.84 E-value=0.93 Score=44.41 Aligned_cols=70 Identities=20% Similarity=0.203 Sum_probs=51.3
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 610 VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
...++++.+|.+.++....+.|.+||.+... ++..+.. ....++|+|.|+.+.+.++.+..+.|..-|+.
T Consensus 228 pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~--------~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ--------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECTTCBS--------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred ceeeEEecCCcEEEEEcCCCEEEEEeCCCCE--------EEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence 4679999999998888788999999976541 2222222 35689999999765566777777877666653
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=87.77 E-value=0.074 Score=52.72 Aligned_cols=29 Identities=7% Similarity=0.054 Sum_probs=26.5
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcc
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.|+||+|+.|+||+++.+...-++||+.|
T Consensus 183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred cccccCCcchhhhhcccccceeEeccccc
Confidence 68999999999999998777789999987
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.65 E-value=0.43 Score=49.91 Aligned_cols=99 Identities=9% Similarity=-0.062 Sum_probs=66.2
Q ss_pred CeEEEEECCCCCEEEEee---------CCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCC
Q 004989 609 LVCSLSFDRDGELFAAAG---------VNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
.+.+..|||||++++.+. ..+.+-|||+.++... ++.... ....+.-..|||+++ .||=.. +
T Consensus 62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~------~l~~~~~~~~~l~~~~wSPDG~-~iafv~-~ 133 (465)
T d1xfda1 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------SLDPPEVSNAKLQYAGWGPKGQ-QLIFIF-E 133 (465)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------ECCCTTCCSCCCSBCCBCSSTT-CEEEEE-T
T ss_pred ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCcee------eccCccCCccccceeeeccCCc-eEEEEe-c
Confidence 456788999999877654 3467788888765211 121111 134577789999765 555443 5
Q ss_pred CcEEEEECCCCcEEEE--------E-----------------EEEeecCCceEEEecCccce
Q 004989 679 GVVQVGQVLHLIYFSA--------L-----------------YCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~--------v-----------------~~v~~~~~~~~~~~~~~~~~ 715 (720)
+-|-+.+..++..++- + ..+-|||.+..+++..+|+-
T Consensus 134 ~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s 195 (465)
T d1xfda1 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDS 195 (465)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECT
T ss_pred ceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEeccc
Confidence 7788888877766543 2 23458999999999888763
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=87.36 E-value=3.7 Score=38.73 Aligned_cols=96 Identities=11% Similarity=0.057 Sum_probs=70.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.+...+++++++|.++++....+++.++|.... .+..+ .+-.....+++.+. ++++++....+.|++
T Consensus 113 ~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~---------~~~~~g~~~~~~~~~~i~~d~~-g~i~v~d~~~~~V~~ 182 (279)
T d1q7fa_ 113 LQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN---------VLHKFGCSKHLEFPNGVVVNDK-QEIFISDNRAHCVKV 182 (279)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECTTSC---------EEEEEECTTTCSSEEEEEECSS-SEEEEEEGGGTEEEE
T ss_pred ccccceeccccCCcEEEEeeccceeeEeccCCc---------eeecccccccccccceeeeccc-eeEEeeeccccceee
Confidence 456789999999998888888888999885432 12222 12345788899885 467777778899999
Q ss_pred EECCCCcEEEE---------EEEEeecCCceEEEecCcc
Q 004989 684 GQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 684 WD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~ 713 (720)
+|. +|+.+.+ -..|++.+.+.+++.+...
T Consensus 183 ~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~ 220 (279)
T d1q7fa_ 183 FNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHN 220 (279)
T ss_dssp EET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSS
T ss_pred eec-CCceeeeecccccccCCcccccccCCeEEEEECCC
Confidence 997 5666665 4688898888888776554
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=86.26 E-value=1 Score=44.01 Aligned_cols=100 Identities=7% Similarity=-0.058 Sum_probs=64.1
Q ss_pred CeEEEEECCCCC-----EEEEeeCCCcEEEeeCCcccccccccccceEEecC--CCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 609 LVCSLSFDRDGE-----LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS--RSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 609 ~V~sv~f~~dg~-----~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.-+.|+|+||++ ++++-+..++|..||+..... .........+.. ....-.+++.+++ ++.++....+.|
T Consensus 173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~--~~~~~~~~~~~~~~~~~pdGiavD~~G-nlyVa~~~~g~I 249 (314)
T d1pjxa_ 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAK--IENKKVWGHIPGTHEGGADGMDFDEDN-NLLVANWGSSHI 249 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTE--EEEEEEEEECCCCSSCEEEEEEEBTTC-CEEEEEETTTEE
T ss_pred eeeeeEECCCCCcceeEEEEEeecccceEEeeccCccc--cceeeEEEEccccccccceeeEEecCC-cEEEEEcCCCEE
Confidence 347899999875 667778889999998653210 000000111111 1225678999864 565655567889
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCc-eEEEecC
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGM 711 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~-~~~~~~~ 711 (720)
.+||..+|+.+.+ ..+++|.+.+ .++++.+
T Consensus 250 ~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~ 287 (314)
T d1pjxa_ 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEEC
Confidence 9999998876554 6789999877 3666544
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.27 E-value=2.5 Score=39.51 Aligned_cols=99 Identities=9% Similarity=0.049 Sum_probs=67.9
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
.+...+|+++++|.++++-.....+.+++....... ......-....+++++|.+ +++++...++.|..+|.
T Consensus 97 ~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~-------~~~~~~~~~p~~i~~~~~g-~~~v~~~~~~~i~~~d~ 168 (260)
T d1rwia_ 97 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-------VLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEA 168 (260)
T ss_dssp CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCE-------ECCCCSCCSCCEEEECTTC-CEEEEEGGGTEEEEECT
T ss_pred eeecccccccccceeEeeccccccccccccccceee-------eeeecccCCcceeeecCCC-CEeeecccccccccccc
Confidence 356789999999999888777788888886543111 1111222345788999854 57777777888999998
Q ss_pred CCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 687 LHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 687 ~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
........ -+.|++.+.+.+++++...
T Consensus 169 ~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~ 202 (260)
T d1rwia_ 169 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT 202 (260)
T ss_dssp TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTT
T ss_pred ccceeeeeeccccCCCccceeeeeeeeeeeecCC
Confidence 76543332 5678888888888776543
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=83.11 E-value=0.54 Score=46.53 Aligned_cols=28 Identities=4% Similarity=0.030 Sum_probs=23.1
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCccc
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
.++||+|+.|.|||++. + ..++||+-|.
T Consensus 192 ~~liHgDlh~~NvL~~~-~-~~~IDFdd~~ 219 (325)
T d1zyla1 192 VLRLHGDCHAGNILWRD-G-PMFVDLDDAR 219 (325)
T ss_dssp CEECCSSCSGGGEEESS-S-EEECCCTTCC
T ss_pred ceeecCCCCcccEEEeC-C-ceEEechhcc
Confidence 57899999999999963 3 5689999873
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=82.28 E-value=0.22 Score=47.14 Aligned_cols=28 Identities=7% Similarity=0.063 Sum_probs=24.4
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcc
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.++|+|+.|.|||++.++.+-|+||+.+
T Consensus 176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~ 203 (255)
T d1nd4a_ 176 VVTHGDACLPNIMVENGRFSGFIDCGRL 203 (255)
T ss_dssp EEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred eEEeCCCCCcceEEeCCceEEEEEchhc
Confidence 3799999999999987666779999887
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=81.35 E-value=0.28 Score=50.19 Aligned_cols=27 Identities=4% Similarity=0.130 Sum_probs=21.3
Q ss_pred ceeccCCCCcEEEcc----------------------------CCceEEeecCcc
Q 004989 142 IVVHNVRPSCFVMSS----------------------------FNHVSFIESASC 168 (720)
Q Consensus 142 IvHrDLKP~NILl~~----------------------------~~~vkliDfg~a 168 (720)
++|+|+.+.||++.+ ++.+++|||-.|
T Consensus 220 ~CHnDL~~~NiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa 274 (395)
T d1nw1a_ 220 FCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYA 274 (395)
T ss_dssp EECSCCCGGGEEEEC------------------------------CCEECCCTTC
T ss_pred EEecCCCcccEeeccccccccccccccccccccccccccccCCCCcEEEEeeccc
Confidence 579999999999853 567899998776
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=80.48 E-value=8.6 Score=36.55 Aligned_cols=92 Identities=11% Similarity=0.038 Sum_probs=59.0
Q ss_pred CCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 608 NLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
..-+.++|++|++ ++.+.+..++|..|++................+.. ......++..+++ ++.++.-..+.|..+|
T Consensus 148 ~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~G-nlWva~~~~g~V~~~d 226 (295)
T d2ghsa1 148 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYD 226 (295)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEEC
T ss_pred CCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCC-CEEeeeeCCCceEEec
Confidence 4567899999998 46777889999999975421111110001112222 3447788998854 4554444467899999
Q ss_pred CCCCcEEEE-------EEEEeec
Q 004989 686 VLHLIYFSA-------LYCIVLN 701 (720)
Q Consensus 686 ~~tg~~~~~-------v~~v~~~ 701 (720)
- .|+.+.. ++|++|.
T Consensus 227 p-~G~~~~~i~lP~~~~T~~~FG 248 (295)
T d2ghsa1 227 T-DGNHIARYEVPGKQTTCPAFI 248 (295)
T ss_dssp T-TCCEEEEEECSCSBEEEEEEE
T ss_pred C-CCcEeeEecCCCCceEEEEEe
Confidence 5 6887776 6888995
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=80.05 E-value=7.8 Score=37.26 Aligned_cols=96 Identities=11% Similarity=-0.012 Sum_probs=61.0
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe--CCCcEEEE-
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN--FEGVVQVG- 684 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s--~D~~v~lW- 684 (720)
-.+..++|+++|.+..+--..++|..||...... .............|+|+|++ +++++.. +.....++
T Consensus 40 ~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~-------~~~~~~~~~~p~gla~~~dG-~l~va~~~~~~~~~~i~~ 111 (319)
T d2dg1a1 40 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI-------KRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFA 111 (319)
T ss_dssp CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-------EEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEE
T ss_pred cCcEeCEECCCCCEEEEECCCCEEEEEECCCCeE-------EEEEeCCCCCeeEEEECCCC-CEEEEecCCCccceeEEE
Confidence 4567899999999988888899999999765410 11112234457899999965 4555443 23334444
Q ss_pred -ECCCCcEEEE---------EEEEeecCCceEEEecC
Q 004989 685 -QVLHLIYFSA---------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 685 -D~~tg~~~~~---------v~~v~~~~~~~~~~~~~ 711 (720)
|..++..... .+-+++.+.+.++.+++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~ 148 (319)
T d2dg1a1 112 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 148 (319)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred EcCCCceeeeeccCCCcccCCcceeEEeccceeeccc
Confidence 4444443221 56678888888777654
|