Citrus Sinensis ID: 005091
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 715 | 2.2.26 [Sep-21-2011] | |||||||
| Q6YYA3 | 725 | Chloroplastic group IIA i | no | no | 0.634 | 0.626 | 0.363 | 2e-72 | |
| Q9FYT6 | 715 | Chloroplastic group IIA i | N/A | no | 0.551 | 0.551 | 0.378 | 2e-71 | |
| Q9LF10 | 720 | Chloroplastic group IIA i | no | no | 0.4 | 0.397 | 0.414 | 6e-52 | |
| Q84N48 | 611 | CRS2-associated factor 2, | N/A | no | 0.188 | 0.220 | 0.322 | 1e-09 | |
| Q6Z4U2 | 428 | CRS2-associated factor 1, | no | no | 0.103 | 0.172 | 0.418 | 4e-09 | |
| Q657G7 | 607 | CRS2-associated factor 2, | no | no | 0.137 | 0.161 | 0.363 | 1e-08 | |
| Q0J7J7 | 366 | CRS2-associated factor 2, | no | no | 0.172 | 0.336 | 0.328 | 1e-08 | |
| Q9FFU1 | 358 | CRS2-associated factor 2, | no | no | 0.149 | 0.298 | 0.309 | 6e-08 | |
| Q8VYD9 | 405 | CRS2-associated factor 1, | no | no | 0.142 | 0.251 | 0.346 | 7e-08 | |
| Q9SL79 | 701 | CRS2-associated factor 1, | no | no | 0.110 | 0.112 | 0.329 | 2e-07 |
| >sp|Q6YYA3|CRS1_ORYSJ Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0360100 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 183/503 (36%), Positives = 275/503 (54%), Gaps = 49/503 (9%)
Query: 224 FPWEKRKEEVAEGRWLVKRRSSRTSL---AELTLPESELRRLRNLTFQTKSKTRIKGAGL 280
PW ++E + +V RR +T + AE L EL RLR + R K AG+
Sbjct: 125 VPWAAARDEETK---VVLRREKKTRVPTRAETELEAGELERLRRAARGKERWARAKKAGI 181
Query: 281 TQAVVDIIHEKW-KTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
T VV+ + +W K E+ ++I M R EILE KTGGLV+W G +YRG
Sbjct: 182 TDEVVEEVRGQWAKGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVWTRGGIHFVYRGS 241
Query: 340 SYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSY 399
SY ++ KR H+ LS T+ +P++ Y
Sbjct: 242 SY----LENAKR--------------------HRDFVNYNEELSPV---TSNNPTSQGKY 274
Query: 400 NNVHATQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPG 459
+ T N +++++ ++ YE EV +LLD LGPR+ DW PLPVDAD+LP
Sbjct: 275 WSKDETLTNDNDEADDKDDKPIKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPE 334
Query: 460 IVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEK 519
+VP ++ PFR P GVR LA +E T L++ AR LP HF LGR+ +LQGLA A++KLWEK
Sbjct: 335 VVPDFKTPFRQCPPGVRPALADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEK 394
Query: 520 SSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQER 579
S IAK+A+K G+Q T E+M ++K+LTGGT++ RNKD+++ YRGK+FL V E++ ER
Sbjct: 395 SLIAKVAVKVGIQNTNHEQMARNLKRLTGGTVILRNKDYIIIYRGKDFLPGGVAESVIER 454
Query: 580 ERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENL 639
E Q +EE+ARL+ + + + + GT +E D + +R ++ N
Sbjct: 455 ESQVHDQQAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFHDSHARRTTEN---NF 511
Query: 640 VREAEVRRHAYLVQKLEKKLARAE-------RKLLRAERALSKVEESLKPAERQADPESI 692
+ E ++H +LEK+L E +K+ R+ + L+K+ S P+++ D E +
Sbjct: 512 RIQLEAKKH-----RLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELL 566
Query: 693 TDEERFMFRKLGLRMKAFLLLGK 715
T+EER +FRK+GL+M +LLG+
Sbjct: 567 TEEERRIFRKIGLKMDEHVLLGR 589
|
Required for the splicing of group IIA introns in chloroplasts, by regulating the intron folding. Forms splicing particles with RNA. Also involved in chloroplast protein translation. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9LF10|CRS1_ARATH Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Arabidopsis thaliana GN=At5g16180 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|Q84N48|CAF2P_MAIZE CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q6Z4U2|CAF1M_ORYSJ CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q657G7|CAF2P_ORYSJ CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q0J7J7|CAF2M_ORYSJ CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|Q9FFU1|CAF2M_ARATH CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q8VYD9|CAF1M_ARATH CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9SL79|CAF1P_ARATH CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=1 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 715 | ||||||
| 224111046 | 894 | predicted protein [Populus trichocarpa] | 0.913 | 0.730 | 0.653 | 0.0 | |
| 225432918 | 902 | PREDICTED: chloroplastic group IIA intro | 0.934 | 0.740 | 0.616 | 0.0 | |
| 147852748 | 902 | hypothetical protein VITISV_010525 [Viti | 0.934 | 0.740 | 0.615 | 0.0 | |
| 449432614 | 874 | PREDICTED: chloroplastic group IIA intro | 0.937 | 0.766 | 0.608 | 0.0 | |
| 356576487 | 835 | PREDICTED: chloroplastic group IIA intro | 0.903 | 0.773 | 0.605 | 0.0 | |
| 255551945 | 773 | conserved hypothetical protein [Ricinus | 0.765 | 0.707 | 0.710 | 0.0 | |
| 357441009 | 838 | Chloroplastic group IIA intron splicing | 0.893 | 0.762 | 0.577 | 0.0 | |
| 297831030 | 873 | hypothetical protein ARALYDRAFT_898801 [ | 0.900 | 0.737 | 0.561 | 0.0 | |
| 30686898 | 881 | CRM family member 3A [Arabidopsis thalia | 0.911 | 0.740 | 0.551 | 0.0 | |
| 110742047 | 717 | hypothetical protein [Arabidopsis thalia | 0.910 | 0.907 | 0.551 | 0.0 |
| >gi|224111046|ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|222864769|gb|EEF01900.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/719 (65%), Positives = 542/719 (75%), Gaps = 66/719 (9%)
Query: 1 MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKN 60
MALVPSRQ DSFQSSFSKFHGT FFR S PL++ Y + S +KN
Sbjct: 1 MALVPSRQLY-----IDSFQSSFSKFHGTPLQFFRYSSSFPLRSHSGY----ACSITDKN 51
Query: 61 PPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDL 120
P K+ SF T DK NL + SSW WNKPNK N + PQA +YR NN +
Sbjct: 52 PSTKSTSFPT-------DKSKTLNLSTGSSWFFNWNKPNKQNLPRTPQAVFDYRSNNSNS 104
Query: 121 SALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERV 180
S GSTM KIVEKLKK GY+ DGD +E + + +ERV
Sbjct: 105 SG------------------SGSTMEKIVEKLKKHGYM-------DGDVNENKERMQERV 139
Query: 181 IEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLV 240
IEKGS+EDIFYVEEG+LPNARGGFSKESPLG+ + SDGEV+FPWEK K+E EG+W
Sbjct: 140 IEKGSVEDIFYVEEGMLPNARGGFSKESPLGVEDVFRSDGEVRFPWEKPKKEEDEGKW-T 198
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRL 300
R SRTSLAELTLPESELRRLRNLT+ TKSKTR+ G G+TQ VVD IH+KWKTSEI R+
Sbjct: 199 ARSKSRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARV 258
Query: 301 KIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPA 360
K+EGAPALNMKRMHEILE KTGGLVIWRSG VSLYRGVSYE P+++ KRI+K+ E
Sbjct: 259 KVEGAPALNMKRMHEILENKTGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKE--- 315
Query: 361 SSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHA----TQVNLETASEEQ 416
S NSL AA T S N +HA T++N+E A++ +
Sbjct: 316 ----------------TSSNSLPAATSITIGSQSKNSPDNEIHAPRPKTEINVEAANQ-K 358
Query: 417 ETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVR 476
ET +VKYEDEV+KLLDGLGPRYTDWPG DPLPVDADMLPG++PGYQPPFR+LPYGVR
Sbjct: 359 ETKTQTDVKYEDEVDKLLDGLGPRYTDWPGLDPLPVDADMLPGVIPGYQPPFRILPYGVR 418
Query: 477 STLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTS 536
TL R+++T+L+RLARVLPPHFA+GRSRQLQGLAVAMIKLWEKSSI K+ALKRGVQLTTS
Sbjct: 419 PTLGRQDSTSLRRLARVLPPHFAVGRSRQLQGLAVAMIKLWEKSSIVKVALKRGVQLTTS 478
Query: 537 ERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLR 596
ERM EDIKKLTGG LLSRNKDFLVFYRGK+FLSP+V+EAL ERERLAKSLQDEEEQARLR
Sbjct: 479 ERMAEDIKKLTGGLLLSRNKDFLVFYRGKDFLSPEVSEALLERERLAKSLQDEEEQARLR 538
Query: 597 ASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLE 656
ASA V+PS E +E+SG AG+L+ETLDA+++WGKRLDD HKE ++REAE+ RHA +V++LE
Sbjct: 539 ASALVIPSDEIMEESGIAGSLEETLDADAKWGKRLDDCHKEKIIREAEIVRHASIVRRLE 598
Query: 657 KKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGK 715
KKLA A+RKL RAER L+KVE LKP+ERQADPESITDEERFMFRKLGLRMKAFLLLG+
Sbjct: 599 KKLAFAQRKLRRAERTLNKVEGFLKPSERQADPESITDEERFMFRKLGLRMKAFLLLGR 657
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432918|ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Vitis vinifera] gi|297737163|emb|CBI26364.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147852748|emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449432614|ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Cucumis sativus] gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356576487|ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255551945|ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis] gi|223543652|gb|EEF45180.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|357441009|ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago truncatula] gi|355479830|gb|AES61033.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|297831030|ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp. lyrata] gi|297329237|gb|EFH59656.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|30686898|ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana] gi|332643191|gb|AEE76712.1| CRM family member 3A [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|110742047|dbj|BAE98956.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 715 | ||||||
| TAIR|locus:2094558 | 881 | CFM3A "CRM family member 3A" [ | 0.444 | 0.360 | 0.628 | 2.1e-180 | |
| TAIR|locus:2094997 | 848 | EMB1865 "embryo defective 1865 | 0.406 | 0.343 | 0.461 | 2.6e-96 | |
| TAIR|locus:2096662 | 1011 | CFM2 "CRM family member 2" [Ar | 0.580 | 0.410 | 0.425 | 3.2e-81 | |
| TAIR|locus:2181372 | 720 | CRS1 "ortholog of maize chloro | 0.416 | 0.413 | 0.395 | 4.8e-66 | |
| TAIR|locus:2061604 | 701 | CAF1 [Arabidopsis thaliana (ta | 0.123 | 0.125 | 0.329 | 7.7e-09 | |
| TAIR|locus:2160195 | 358 | AT5G54890 [Arabidopsis thalian | 0.152 | 0.304 | 0.350 | 1.6e-07 | |
| TAIR|locus:2126694 | 405 | AT4G31010 [Arabidopsis thalian | 0.141 | 0.249 | 0.390 | 2.6e-07 | |
| TAIR|locus:2028100 | 564 | CAF2 [Arabidopsis thaliana (ta | 0.088 | 0.111 | 0.365 | 1.3e-06 |
| TAIR|locus:2094558 CFM3A "CRM family member 3A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1012 (361.3 bits), Expect = 2.1e-180, Sum P(3) = 2.1e-180
Identities = 201/320 (62%), Positives = 242/320 (75%)
Query: 398 SYNNVHATQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADML 457
S VH Q+ ET S E++ V+YEDE+++LLD LGPR+ DWPG +PLPVDAD+L
Sbjct: 342 SDEKVHLPQLEQETTSVEKKDQTSPVVEYEDELDELLDDLGPRFMDWPGDNPLPVDADLL 401
Query: 458 PGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLW 517
PG +P Y+PPFRVLPYGVRS+L KEAT L+RLAR +PPHFALGRSRQLQGLA AM++LW
Sbjct: 402 PGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLW 461
Query: 518 EKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQ 577
EKS +AKIA+KRGVQ TTSERM ED+KKLTGG +LSRNKDFLVFYRGKNFLS +V +AL
Sbjct: 462 EKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFLVFYRGKNFLSREVADALV 521
Query: 578 ERERLAKSLQDEEEQARLR-ASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDS-H 635
E+ER ++LQDEEEQARLR +SA ++PS E K +AGTL ETLDA +WGK LDD H
Sbjct: 522 EQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGKWGKNLDDDDH 581
Query: 636 KENLVREAEVRRHAYLVQXXXXXXXXXXXXXXXXXXXXSKVEESLKPAERQADPESITDE 695
+ + +E E+ RH LV+ +KVE LKPAE++ DPESITDE
Sbjct: 582 SDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDE 641
Query: 696 ERFMFRKLGLRMKAFLLLGK 715
ERFMFRKLGL+MKAFLLLG+
Sbjct: 642 ERFMFRKLGLKMKAFLLLGR 661
|
|
| TAIR|locus:2094997 EMB1865 "embryo defective 1865" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096662 CFM2 "CRM family member 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2181372 CRS1 "ortholog of maize chloroplast splicing factor CRS1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2061604 CAF1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2160195 AT5G54890 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2126694 AT4G31010 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2028100 CAF2 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 715 | |||
| smart01103 | 84 | smart01103, CRS1_YhbY, Escherichia coli YhbY is as | 3e-19 | |
| pfam01985 | 84 | pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain | 2e-18 | |
| smart01103 | 84 | smart01103, CRS1_YhbY, Escherichia coli YhbY is as | 4e-13 | |
| pfam01985 | 84 | pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain | 9e-12 |
| >gnl|CDD|198171 smart01103, CRS1_YhbY, Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly | Back alignment and domain information |
|---|
Score = 82.5 bits (205), Expect = 3e-19
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L + R LR+L K +I GLT+ V++ I E + E++++K+ G + K +
Sbjct: 1 LTGKQKRYLRSLAHHLKPVVQIGKNGLTEGVLEEIDEALEKHELIKVKVLGNDREDRKEI 60
Query: 314 HEILERKTGGLVIWRSGTAVSLYR 337
E L +TG ++ G + LYR
Sbjct: 61 AEELAEETGAELVQVIGKTIVLYR 84
|
GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been retained in plants. A CRM domain containing protein in plant chloroplasts has been shown to function in group I and II intron splicing. In vitro experiments with an isolated maize CRM domain have shown it to have RNA binding activity. These and other results suggest that the CRM domain evolved in the context of ribosome function prior to the divergence of Archaea and Bacteria, that this function has been maintained in extant prokaryotes, and that the domain was recruited to serve as an RNA binding module during the evolution of plant genomes. YhbY has a fold similar to that of the C-terminal domain of translation initiation factor 3 (IF3C), which binds to 16S rRNA in the 30S ribosome. Length = 84 |
| >gnl|CDD|190184 pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain | Back alignment and domain information |
|---|
| >gnl|CDD|198171 smart01103, CRS1_YhbY, Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly | Back alignment and domain information |
|---|
| >gnl|CDD|190184 pfam01985, CRS1_YhbY, CRS1 / YhbY (CRM) domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 715 | |||
| KOG1990 | 564 | consensus Poly(A)-specific exoribonuclease PARN [R | 100.0 | |
| PF01985 | 84 | CRS1_YhbY: CRS1 / YhbY (CRM) domain; InterPro: IPR | 99.92 | |
| PRK10343 | 97 | RNA-binding protein YhbY; Provisional | 99.92 | |
| TIGR00253 | 95 | RNA_bind_YhbY putative RNA-binding protein, YhbY f | 99.91 | |
| PRK10343 | 97 | RNA-binding protein YhbY; Provisional | 99.91 | |
| TIGR00253 | 95 | RNA_bind_YhbY putative RNA-binding protein, YhbY f | 99.91 | |
| PF01985 | 84 | CRS1_YhbY: CRS1 / YhbY (CRM) domain; InterPro: IPR | 99.9 | |
| KOG1990 | 564 | consensus Poly(A)-specific exoribonuclease PARN [R | 99.9 | |
| COG1534 | 97 | Predicted RNA-binding protein containing KH domain | 99.88 | |
| COG1534 | 97 | Predicted RNA-binding protein containing KH domain | 99.87 |
| >KOG1990 consensus Poly(A)-specific exoribonuclease PARN [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=422.01 Aligned_cols=400 Identities=43% Similarity=0.587 Sum_probs=364.2
Q ss_pred hccCccccccCCCCHHHHHHHHhhhcCCCCeEEeCCCCCCHHHHHHHHHHHHhCCeEEEEecCCChhhHHHHHHHHHHHh
Q 005091 242 RRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKT 321 (715)
Q Consensus 242 ~k~~~p~~ae~~Lt~kErr~LR~lA~~Lkp~v~IGK~GlTd~Vv~~I~~awek~ELVKIK~~g~~~~dmk~~ae~Le~kT 321 (715)
++.+ +.++++++...++.+||..|..+.-.. +++|+|+.+++.|+..|+.+|+++++|....+.+|.+++++++..|
T Consensus 3 ~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~y~k~k~~~~~~~~~q~~~~~~~~~~~~~~~~~~ 79 (564)
T KOG1990|consen 3 NFES-LSLAELTVDEADLRRLRLVATGMTSAP--WKAGSTFDTVEAIYLKWKDNEEVYLKFQFGLCLFMKRSHEALEMST 79 (564)
T ss_pred cccc-hhHHHhhcCHHHHHHHhhhhccceecc--cccccchhhhHHHHHHHHhhhhhheeeccccchhHHHhhhHhhccC
Confidence 3456 999999999999999999999998887 9999999999999999999999999999989999999999999999
Q ss_pred CC-eEEEEECcEEEEeeCCCCCCchhhhhHHHhhhccCCccccccchhhhhhhhhccccCCcccccccccCCCCCCCCcc
Q 005091 322 GG-LVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYN 400 (715)
Q Consensus 322 Gg-~VVqriG~~iVLYRGknY~~p~v~~~~~l~~r~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~ 400 (715)
|| -+||+.|.....|++..|..|.+..++. ++ . +
T Consensus 80 ~~n~~~~~~g~~~s~~~~~~~~~~~~~~~~~----~~-----------~----~-------------------------- 114 (564)
T KOG1990|consen 80 GGNFVVWSRGDSISSPEFLCQRSPVDFVARQ----QE-----------N----Q-------------------------- 114 (564)
T ss_pred CCceeeeecCccccCCccceeecchhhhhhh----ch-----------h----h--------------------------
Confidence 99 9999999999999888888775433210 00 0 0
Q ss_pred cchhcchhhcccchhhhhhhHHhhhhHHHHHHHhhccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCccCC
Q 005091 401 NVHATQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLA 480 (715)
Q Consensus 401 e~~~~~~~~~~~~~~~~~~~~~~~~~e~e~d~LLd~LgpR~~dW~g~~plPVDadLLPa~vPgyk~PfR~lP~g~~e~LT 480 (715)
...-..+++++.+.+++++||++.+||+.+++|||+|++|+.||+|..|||.+|++++++|+
T Consensus 115 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~i~~~~~p~r~l~~~~~~~l~ 176 (564)
T KOG1990|consen 115 ------------------AGKWPSELEKEKNELLDSLGPELSDWGGSDRLSVDADLLPEKIPDYMRPFRTLPVGSPPLLT 176 (564)
T ss_pred ------------------hhhhHHHHHHHHHHHhhccCcccccCCCCCCccchhhhchhhhhcccChhccCCCCChhhhh
Confidence 00012356789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCeEEeCCCCchHHHHHHHHHHHHhcCeeEEEEcCCCChhhHHHHHHHH--HHHhCCeEEEeeCCE
Q 005091 481 RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDI--KKLTGGTLLSRNKDF 558 (715)
Q Consensus 481 ~kEr~~LRklAh~LkPvv~LGknGvtdgvi~~I~~awekhELIKIkik~g~~~~~~~~mAeeL--~~~TGg~LVq~iG~~ 558 (715)
..+.+++|++|..++|||.+|.++..++++..|+.+|++|+.+|+.+++|.+.+....||.++ ...||+.||.+++..
T Consensus 177 ~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~~~~rg~~~~~~~~~a~~l~~~~~tg~~lv~hN~~~ 256 (564)
T KOG1990|consen 177 SIESTLLRRLGYKLPPHFALGRSRKLQGLAVAMVSFWEKHEFAKILIKRGVLETRKERMADELQELLLTGKVLVLHNKLL 256 (564)
T ss_pred hHHHHHHHHhcccccccceehhccccccchhHHHHHHHHHHHHHHHHHhcchhhhccchHHHHHHHHhcCCeEEeeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred EEEEcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchhhhcccCccchhHHHHHHhhhcCCCCChhHH-H
Q 005091 559 LVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHK-E 637 (715)
Q Consensus 559 IILYRgkn~~~p~v~n~L~kr~al~rs~q~~Ee~ar~~a~~~~~~~~~~~~~~~~agtl~e~~~a~~~~g~~~~~~~~-~ 637 (715)
+|+||+++|.+ .+..+|.+++++....++.++.+|+.++..+. .+..++|+.|+..+.++|+..+.-... .
T Consensus 257 dv~y~~~~Fl~-~lp~~l~~f~~~~~~fp~~~~~~~~~~~~~~~-------~~~~~~t~~e~~~~~~~~~~~~~~~~~~~ 328 (564)
T KOG1990|consen 257 DVMYRYKNFLS-PLPSTLEEFTDSSSMFPNIEDTKRLAKLSEYQ-------KLNLKATLLELARAKAKKEKEIERRSISS 328 (564)
T ss_pred eeeeehhhccc-ccchhHHHhhhhhhhhhhhHHHHHhhcccccc-------chhhhhhHHHHHHHhcccccCcccccccc
Confidence 99999999999 88889999999977789999999999743222 145799999999999999999865543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHhhcccccccccCCC
Q 005091 638 NLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGK 715 (715)
Q Consensus 638 ~~~~e~~~~r~~~~~k~~e~kL~~a~~K~~kaek~L~kle~~~~P~~~~~d~E~iTeEER~mfRkiGLkMk~fLlLGR 715 (715)
.+..+.....+++..+.++++++.+..|++.|+..|++++....|++...|+|.||+|||+||+|+|++|+.|+++||
T Consensus 329 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~t~ee~~~~~k~g~k~~~~~~~~r 406 (564)
T KOG1990|consen 329 RLKLEFEKASSEKLTEAIFHKLEKAKKKLASANRILAKLEDPKIPAELRYDPESITEEERLMLRKVGLKMKRRLLSGR 406 (564)
T ss_pred hhhhhhhccchhhHHHHHHHHHhhhhhhccchhhhhhcccccccccccccchhhcChHHHHHHHHHHHhhccccccCC
Confidence 678888999999999999999999999999999999999999999999999999999999999999999999999997
|
|
| >PF01985 CRS1_YhbY: CRS1 / YhbY (CRM) domain; InterPro: IPR001890 The CRM domain is an ~100-amino acid RNA-binding domain | Back alignment and domain information |
|---|
| >PRK10343 RNA-binding protein YhbY; Provisional | Back alignment and domain information |
|---|
| >TIGR00253 RNA_bind_YhbY putative RNA-binding protein, YhbY family | Back alignment and domain information |
|---|
| >PRK10343 RNA-binding protein YhbY; Provisional | Back alignment and domain information |
|---|
| >TIGR00253 RNA_bind_YhbY putative RNA-binding protein, YhbY family | Back alignment and domain information |
|---|
| >PF01985 CRS1_YhbY: CRS1 / YhbY (CRM) domain; InterPro: IPR001890 The CRM domain is an ~100-amino acid RNA-binding domain | Back alignment and domain information |
|---|
| >KOG1990 consensus Poly(A)-specific exoribonuclease PARN [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A Length = 98 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 3e-09
Identities = 20/85 (23%), Positives = 37/85 (43%)
Query: 253 TLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKR 312
TL + + L+ L + G GLT+ V+ I E++++K+ GA +
Sbjct: 2 TLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQL 61
Query: 313 MHEILERKTGGLVIWRSGTAVSLYR 337
+ + R+T + G + LYR
Sbjct: 62 IINAIVRETKAAQVQTIGHILVLYR 86
|
| >1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1 Length = 104 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 715 | |||
| 1jo0_A | 98 | Hypothetical protein HI1333; structural genomics, | 99.94 | |
| 1rq8_A | 104 | Conserved hypothetical protein; structural genomic | 99.93 | |
| 1rq8_A | 104 | Conserved hypothetical protein; structural genomic | 99.92 | |
| 1jo0_A | 98 | Hypothetical protein HI1333; structural genomics, | 99.92 |
| >1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=207.52 Aligned_cols=89 Identities=22% Similarity=0.339 Sum_probs=86.9
Q ss_pred CCCHHHHHHHHhhhcCCCCeEEeCCCCCCHHHHHHHHHHHHhCCeEEEEecCCChhhHHHHHHHHHHHhCCeEEEEECcE
Q 005091 253 TLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTA 332 (715)
Q Consensus 253 ~Lt~kErr~LR~lA~~Lkp~v~IGK~GlTd~Vv~~I~~awek~ELVKIK~~g~~~~dmk~~ae~Le~kTGg~VVqriG~~ 332 (715)
+||++|+++||++||+|+|+|+|||+|||++|+++|+++|++||||||+|.+++..+++++|++|+++|||++||+||++
T Consensus 2 ~Lt~kqr~~Lr~~ah~l~pvv~IGk~GlT~~vi~ei~~aL~~~ELIKVkvl~~~~~~~~e~a~~la~~t~a~~Vq~IG~~ 81 (98)
T 1jo0_A 2 TLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQLIINAIVRETKAAQVQTIGHI 81 (98)
T ss_dssp CCCHHHHHHHHHHHTTBCCSEEECTTCSCHHHHHHHHHHHHHHSEEEEEETTCCHHHHHHHHHHHHHHHCCEEEEEETTE
T ss_pred CCCHHHHHHHHHHhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCeEEEEEeCCCHHHHHHHHHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCCC
Q 005091 333 VSLYRGVSY 341 (715)
Q Consensus 333 iVLYRGknY 341 (715)
+||||++.-
T Consensus 82 ~vLyR~~~~ 90 (98)
T 1jo0_A 82 LVLYRPSEE 90 (98)
T ss_dssp EEEECCCSS
T ss_pred EEEEccCCC
Confidence 999999843
|
| >1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1 | Back alignment and structure |
|---|
| >1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1 | Back alignment and structure |
|---|
| >1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 715 | ||||
| d1rq8a_ | 96 | d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphy | 4e-17 | |
| d1rq8a_ | 96 | d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphy | 4e-12 | |
| d1jo0a_ | 97 | d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus i | 6e-16 | |
| d1jo0a_ | 97 | d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus i | 1e-12 |
| >d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]} Length = 96 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: IF3-like superfamily: YhbY-like family: YhbY-like domain: Hypothetical protein SAV1595 species: Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]
Score = 74.7 bits (184), Expect = 4e-17
Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L + R LR+L +I G+ + ++ I + + E++++ + + K +
Sbjct: 2 LTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKEL 61
Query: 314 HEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQL 348
E L T ++ G+ + +YR S E ++L
Sbjct: 62 AETLSEATRSELVQVIGSMIVIYRE-SKENKEIEL 95
|
| >d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]} Length = 96 | Back information, alignment and structure |
|---|
| >d1jo0a_ d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus influenzae [TaxId: 727]} Length = 97 | Back information, alignment and structure |
|---|
| >d1jo0a_ d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus influenzae [TaxId: 727]} Length = 97 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 715 | |||
| d1jo0a_ | 97 | YhbY homologue HI1333 {Haemophilus influenzae [Tax | 99.93 | |
| d1rq8a_ | 96 | Hypothetical protein SAV1595 {Staphylococcus aureu | 99.93 | |
| d1rq8a_ | 96 | Hypothetical protein SAV1595 {Staphylococcus aureu | 99.92 | |
| d1jo0a_ | 97 | YhbY homologue HI1333 {Haemophilus influenzae [Tax | 99.92 |
| >d1jo0a_ d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: IF3-like superfamily: YhbY-like family: YhbY-like domain: YhbY homologue HI1333 species: Haemophilus influenzae [TaxId: 727]
Probab=99.93 E-value=1.9e-26 Score=203.33 Aligned_cols=89 Identities=22% Similarity=0.344 Sum_probs=86.9
Q ss_pred CCCCHHHHHHHHhhhcCCCCeEEeCCCCCCHHHHHHHHHHHHhCCeEEEEecCCChhhHHHHHHHHHHHhCCeEEEEECc
Q 005091 252 LTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGT 331 (715)
Q Consensus 252 ~~Lt~kErr~LR~lA~~Lkp~v~IGK~GlTd~Vv~~I~~awek~ELVKIK~~g~~~~dmk~~ae~Le~kTGg~VVqriG~ 331 (715)
.+||++|+++||++||+|+|+|+|||+|||++|+++|+++|++||||||+|.+.+..++++++++|+++|||.|||+||+
T Consensus 1 ttLt~kqr~~LR~~ah~lkp~v~IGk~Glt~~vi~ei~~al~~~ELIKvki~~~~~~~~~~~~~~l~~~t~~~vV~~iG~ 80 (97)
T d1jo0a_ 1 TTLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQLIINAIVRETKAAQVQTIGH 80 (97)
T ss_dssp CCCCHHHHHHHHHHHTTBCCSEEECTTCSCHHHHHHHHHHHHHHSEEEEEETTCCHHHHHHHHHHHHHHHCCEEEEEETT
T ss_pred CCCCHHHHHHHHHHhcCCCCEEEECCCCCCHHHHHHHHHHHHhCCeEEEEEcCCCHHHHHHHHHHHHHHhCCEEEEEECC
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCC
Q 005091 332 AVSLYRGVS 340 (715)
Q Consensus 332 ~iVLYRGkn 340 (715)
++||||+++
T Consensus 81 ~~ilYR~~~ 89 (97)
T d1jo0a_ 81 ILVLYRPSE 89 (97)
T ss_dssp EEEEECCCS
T ss_pred EEEEEcCCC
Confidence 999999975
|
| >d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1jo0a_ d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|